| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 1,872,030 | Δ1,437 bp | [dgcJ] | [dgcJ] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 1872030 | 1873466 | 1437 | 100 [0] | [0] 101 | [dgcJ] | [dgcJ] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1872029 | 0 (0.000) | 98 (1.020) | 64/96 | 0.0 | 100% | intergenic (+169/‑12) | cdgI/dgcJ | putative c‑di‑GMP binding protein CdgI/putative diguanylate cyclase DgcJ |
| ? | NC_000913 | 1873467 = | 0 (0.000) | coding (1427/1491 nt) | dgcJ | putative diguanylate cyclase DgcJ | |||||
AGGCCGCAATCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGTGCCATTTATCATGAAATTGCACCATAGAATGCTCCGGCATTTTATCG > NC_000913/1871980‑1872077 | aGGCCGCAATCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAG < 1:5121473‑M1/50‑1 (MQ=255) ccGCAATCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGatg < 1:3455111‑M1/50‑4 (MQ=255) ccGCAATCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGatg > 1:6962254‑M1/1‑47 (MQ=255) cGCAATCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGatgc < 1:3825912‑M1/50‑5 (MQ=255) cGCAATCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGatgc > 1:2107444‑M1/1‑46 (MQ=255) cAATCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGatgcgt < 1:6915215‑M1/50‑7 (MQ=255) cAATCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGatgcg > 1:3072998‑M1/1‑44 (MQ=255) aaTCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGatgcgta < 1:4720623‑M1/50‑8 (MQ=255) aTCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGatgcgtat < 1:2155938‑M1/50‑9 (MQ=255) aTCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGatgcgta > 1:5384723‑M1/1‑42 (MQ=255) aTCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGatgcgta > 1:3966695‑M1/1‑42 (MQ=255) tCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGatgcgtata < 1:4321271‑M1/50‑10 (MQ=255) tCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGatgcgtata < 1:3801155‑M1/50‑10 (MQ=255) tCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGatgcgtat > 1:1783133‑M1/1‑41 (MQ=255) cGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGatgcgtata > 1:826212‑M1/1‑40 (MQ=255) cGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGatgcgtata > 1:2766055‑M1/1‑40 (MQ=255) gAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGatgcgtataaa < 1:6570824‑M1/50‑12 (MQ=255) gAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGatgcgtata > 1:6741536‑M1/1‑39 (MQ=255) gAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGatgcgtata > 1:7110945‑M1/1‑39 (MQ=255) aaCTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGatgcgtataaag < 1:1807153‑M1/50‑13 (MQ=255) aaCTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGatgcgtataaag < 1:4293637‑M1/50‑13 (MQ=255) aaCTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGatgcgtataaag < 1:5444827‑M1/50‑13 (MQ=255) aaCTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGatgcgtataaag > 1:2576127‑M1/1‑38 (MQ=255) aCTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGatgcgtataaagc > 1:4327520‑M1/1‑37 (MQ=255) aCTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGatgcgtataaagc > 1:4483931‑M1/1‑37 (MQ=255) aCTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGatgcgtataaagc > 1:7379129‑M1/1‑37 (MQ=255) cTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGatgcgtataaagct < 1:4735554‑M1/50‑15 (MQ=255) cTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGatgcgtataaagct > 1:6581060‑M1/1‑36 (MQ=255) cTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGatgcgtataaagct < 1:5316745‑M1/50‑15 (MQ=255) tttATCTGGTTTTCTCGTTTCACTAACCGAAGGAGatgcgtataaagctt > 1:3183450‑M1/1‑35 (MQ=255) tttATCTGGTTTTCTCGTTTCACTAACCGAAGGAGatgcgtataaagctt > 1:2176456‑M1/1‑35 (MQ=255) tATCTGGTTTTCTCGTTTCACTAACCGAAGGAGatgcgtataaagcttc < 1:6051554‑M1/49‑17 (MQ=255) tATCTGGTTTTCTCGTTTCACTAACCGAAGGAGatgcgtataaagctt < 1:3612953‑M1/48‑16 (MQ=255) aTCTGGTTTTCTCGTTTCACTAACCGAAGGAGatgcgtataaagcttcc < 1:2550569‑M1/49‑18 (MQ=255) tCTGGTTTTCTCGTTTCACTAACCGAAGGAGatgcgtataaagcttccga > 1:5783579‑M1/1‑31 (MQ=255) tCTGGTTTTCTCGTTTCACTAACCGAAGGAGatgcgtataaagcttccga > 1:1899849‑M1/1‑31 (MQ=255) tCTGGTTTTCTCGTTTCACTAACCGAAGGAGatgcgtataaagcttccg < 1:6729016‑M1/49‑19 (MQ=255) tCTGGTTTTCTCGTTTCACTAACCGAAGGAGatgcgtataaagcttccg < 1:6613331‑M1/49‑19 (MQ=255) cTGGTTTTCTCGTTTCACTAACCGAAGGAGatgcgtataaagcttccgat > 1:3802843‑M1/1‑30 (MQ=255) tGGTTTTCTCGTTTCACTAACCGAAGGAGatgcgtataaagcttccgat > 1:3450617‑M1/1‑29 (MQ=255) tGGTTTTCTCGTTTCACTAACCGAAGGAGatgcgtataaagcttccgat > 1:4493896‑M1/1‑29 (MQ=255) tGGTTTTCTCGTTTCACTAACCGAAGGAGatgcgtataaagcttccgat > 1:6311966‑M1/1‑29 (MQ=255) ggTTTTCTCGTTTCACTAACCGAAGGAGatgcgtataaagcttccgat > 1:6108065‑M1/1‑28 (MQ=255) gTTTTCTCGTTTCACTAACCGAAGGAGatgcgtataaagcttccgatgag < 1:3785875‑M1/50‑24 (MQ=255) gTTTTCTCGTTTCACTAACCGAAGGAGatgcgtataaagcttccgatgag < 1:489194‑M1/50‑24 (MQ=255) ttCTCGTTTCACTAACCGAAGGAGatgcgtataaagcttccgatgagcgt > 1:6900401‑M1/1‑24 (MQ=255) ttCTCGTTTCACTAACCGAAGGAGatgcgtataaagcttccgatgagcg < 1:546444‑M1/49‑26 (MQ=255) tctcGTTTCACTAACCGAAGGAGatgcgtataaagcttccgatgagcgtt > 1:5981721‑M1/1‑23 (MQ=255) tctcGTTTCACTAACCGAAGGAGatgcgtataaagcttccgatgagcgt < 1:223067‑M1/49‑27 (MQ=255) tctcGTTTCACTAACCGAAGGAGatgcgtataaagcttccgatgagcgt < 1:1228545‑M1/49‑27 (MQ=255) ctcGTTTCACTAACCGAAGGAGatgcgtataaagcttccgatgagcgtt < 1:3503469‑M1/49‑28 (MQ=255) ctcGTTTCACTAACCGAAGGAGatgcgtataaagcttccgatgagcgtt < 1:2302195‑M1/49‑28 (MQ=255) tcGTTTCACTAACCGAAGGAGatgcgtataaagcttccgatgagcgttta > 1:2203113‑M1/1‑21 (MQ=255) cGTTTCACTAACCGAAGGAGatgcgtataaagcttccgatgagcgttta > 1:5063545‑M1/1‑20 (MQ=255) cGTTTCACTAACCGAAGGAGatgcgtataaagcttccgatgagcgttta > 1:5438085‑M1/1‑20 (MQ=255) cGTTTCACTAACCGAAGGAGatgcgtataaagcttccgatgagcgttta > 1:806291‑M1/1‑20 (MQ=255) gTTTCACTAACCGAAGGAGatgcgtataaagcttccgatgagcgtttata < 1:3724052‑M1/50‑32 (MQ=255) gTTTCACTAACCGAAGGAGatgcgtataaagcttccgatgagcgttta < 1:3893411‑M1/48‑30 (MQ=255) gTTTCACTAACCGAAGGAGatgcgtataaagcttccgatgagcgttt < 1:2840384‑M1/47‑29 (MQ=255) tttCACTAACCGAAGGAGatgcgtataaagcttccgatgagcgtttatat > 1:2295121‑M1/1‑18 (MQ=255) tttCACTAACCGAAGGAGatgcgtataaagcttccgatgagcgtttatat < 1:4690507‑M1/50‑33 (MQ=255) tttCACTAACCGAAGGAGatgcgtataaagcttccgatgagcgtttatat < 1:1877967‑M1/50‑33 (MQ=255) tttCACTAACCGAAGGAGatgcgtataaagcttccgatgagagtttatat > 1:3999532‑M1/1‑18 (MQ=255) ttCACTAACCGAAGGAGatgcgtataaagcttccgatgagcgtttatatg > 1:1043578‑M1/1‑17 (MQ=255) tCACTAACCGAAGGAGatgcgtataaagcttccgatgagcgtttatatgt > 1:1773448‑M1/1‑16 (MQ=255) tCACTAACCGAAGGAGatgcgtataaagcttccgatgagcgtttatatg < 1:3890219‑M1/49‑34 (MQ=255) tCACTAACCGAAGGAGatgcgtataaagcttccgatgagcgtttatatg < 1:1059220‑M1/49‑34 (MQ=255) cACTAACCGAAGGAGatgcgtataaagcttccgatgagcgtttatatgt < 1:271704‑M1/49‑35 (MQ=255) cACTAACCGAAGGAGatgcgtataaagcttccgatgagcgtttatatgt > 1:3343066‑M1/1‑15 (MQ=255) aCTAACCGAAGGAGatgcgtataaagcttccgatgagcgtttatatgtca < 1:6268149‑M1/50‑37 (MQ=255) cTAACCGAAGGAGatgcgtataaagcttccgatgagcgtttatatgtcaa < 1:2949900‑M1/50‑38 (MQ=255) cTAACCGAAGGAGatgcgtataaagcttccgatgagcgtttatatgtcaa < 1:3390793‑M1/50‑38 (MQ=255) cTAACCGAAGGAGatgcgtataaagcttccgatgagcgtttatatgtcaa < 1:3498597‑M1/50‑38 (MQ=255) tAACCGAAGGAGatgcgtataaagcttccgatgagcgtttatatgtcaa > 1:5577217‑M1/1‑12 (MQ=255) tAACCGAAGGAGatgcgtataaagcttccgatgagcgtttatatgtcaa > 1:1606983‑M1/1‑12 (MQ=255) tAACCGAAGGAGatgcgtataaagcttccgatgagcgtttatatgtcaa > 1:3446546‑M1/1‑12 (MQ=255) tAACCGAAGGAGatgcgtataaagcttccgatgagcgtttatatgtcaa > 1:5162810‑M1/1‑12 (MQ=255) aaCCGAAGGAGatgcgtataaagcttccgatgagcgtttatatgtcaat > 1:1414476‑M1/1‑11 (MQ=255) aaCCGAAGGAGatgcgtataaagcttccgatgagcgtttatatgtcaat > 1:3405153‑M1/1‑11 (MQ=255) aCCGAAGGAGatgcgtataaagcttccgatgagcgtttatatgtcaataa < 1:1726567‑M1/50‑41 (MQ=255) aCCGAAGGAGatgcgtataaagcttccgatgagcgtttatatgtcaataa < 1:6637443‑M1/50‑41 (MQ=255) aCCGAAGGAGatgcgtataaagcttccgatgagcgtttatatgtcaata < 1:7049109‑M1/49‑40 (MQ=255) aCCGAAGGAGatgcgtataaagcttccgatgagcgtttatatgtcaat > 1:752926‑M1/1‑10 (MQ=255) ccGAAGGAGatgcgtataaagcttccgttgagcgtttatatgtcaataag > 1:6425499‑M1/1‑9 (MQ=255) ccGAAGGAGatgcgtataaagcttccgatgagcgtttatatgtcaataag > 1:1158408‑M1/1‑9 (MQ=255) ccGAAGGAGatgcgtataaagcttccgatgagcgtttatatgtcaataag < 1:628688‑M1/50‑42 (MQ=255) cGAAGGAGatgcgtataaagcttccgatgagcgtttatatgtcaataagc < 1:2788461‑M1/50‑43 (MQ=255) cGAAGGAGatgcgtataaagcttccgatgagcgtttatatgtcaataag > 1:4540669‑M1/1‑8 (MQ=255) gAAGGAGatgtgtataaagcttccgatgagcgtttatatgtcaataag > 1:5629426‑M1/1‑7 (MQ=255) gAAGGAGatgcgtataaagcttccgatgagcgtttatatgtcaataagca < 1:4551003‑M1/50‑44 (MQ=255) gAAGGAGatgcgtataaagcttccgatgagcgtttatatgtcaataag > 1:2060732‑M1/1‑7 (MQ=255) gAAGGAGatgcgtataaagcttccgatgagcgtttatatgtcaataag > 1:2906872‑M1/1‑7 (MQ=255) aGGAGatgcgtataaagcttccgatgagcgtttatatgtcaataagcaga < 1:2897216‑M1/50‑46 (MQ=255) aGGAGatgcgtataaagcttccgatgagcgtttatatgtcaataagcaga < 1:3524014‑M1/50‑46 (MQ=255) ggAGatgcgtataaagcttccgatgagcgtttatatgtcaataagtagaa > 1:2490784‑M1/1‑4 (MQ=255) ggAGatgcgtataaagcttccgatgagcgtttatatgtcaataagcagaa > 1:6061762‑M1/1‑4 (MQ=255) ggAGatgcgtataaagcttccgatgagcgtttatatgtcaataagcagaa < 1:1414527‑M1/50‑47 (MQ=255) gagatgcgtataaagcttccgatgagcgtttatatgtcaataagcagaac < 1:582837‑M1/50‑48 (MQ=255) gagatgcgtataaagcttccgatgagcgtttatatgtcaataagcagaa > 1:3215673‑M1/1‑3 (MQ=255) gatgcgtataaagcttccgatgagcgtttatatgtcaataagcagaaca > 1:3936866‑M1/1‑1 (MQ=255) | AGGCCGCAATCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGTGCCATTTATCATGAAATTGCACCATAGAATGCTCCGGCATTTTATCG > NC_000913/1871980‑1872077 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |