| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,994,992 | Δ3,877 bp | [ygeL]–ygeQ | [ygeL], ygeN, ygeO, insD‑4, insC‑4, ygeP, ygeQ | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2994992 | 2998868 | 3877 | 118 [0] | [0] 121 | [ygeL]–ygeQ | [ygeL],ygeN,ygeO,insD‑4,insC‑4,ygeP,ygeQ |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2994991 | 0 (0.000) | 111 (1.190) | 66/94 | 0.0 | 100% | pseudogene (102/156 nt) | ygeL | protein YgeL |
| ? | NC_000913 | 2998869 = | 0 (0.000) | intergenic (‑41/+115) | ygeQ/glyU | protein YgeQ/tRNA‑Gly | |||||
Only 100 of 118 total aligned reads displayed.
CTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAACAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCC > NC_000913/2994942‑2995040 | cTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCC < 1:887973‑M1/50‑1 (MQ=255)cTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCC < 1:5597120‑M1/50‑1 (MQ=255) tGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCa > 1:5579231‑M1/1‑49 (MQ=255) gTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCac > 1:6448758‑M1/1‑48 (MQ=255) gTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCac > 1:5441982‑M1/1‑48 (MQ=255) tAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCac < 1:5712172‑M1/49‑3 (MQ=255) aGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCact > 1:3574160‑M1/1‑46 (MQ=255) gATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCactta > 1:6634759‑M1/1‑45 (MQ=255) gATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCactta < 1:4200990‑M1/50‑6 (MQ=255) aTTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCacttat < 1:2488075‑M1/50‑7 (MQ=255) aTTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCacttat < 1:4507275‑M1/50‑7 (MQ=255) aTTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCacttat < 1:4334737‑M1/50‑7 (MQ=255) tttGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCacttatt > 1:6630301‑M1/1‑43 (MQ=255) tttGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCacttatt < 1:1955733‑M1/50‑8 (MQ=255) tGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCacttattt < 1:1485925‑M1/49‑9 (MQ=255) gTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCacttattta < 1:5226020‑M1/49‑10 (MQ=255) gTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCacttattta < 1:3586062‑M1/49‑10 (MQ=255) ttACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCacttatttaac < 1:4809158‑M1/50‑12 (MQ=255) ttACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCacttatttaac < 1:2531521‑M1/50‑12 (MQ=255) tACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCacttatttaac > 1:2725623‑M1/1‑38 (MQ=255) acacTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCacttatttaacaa > 1:920053‑M1/1‑37 (MQ=255) cacTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCacttatttaacaac < 1:3938781‑M1/50‑15 (MQ=255) cacTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCacttatttaacaac > 1:1986701‑M1/1‑36 (MQ=255) cacTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCacttatttaacaac < 1:7344367‑M1/50‑15 (MQ=255) cacTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCacttatttaacaa < 1:7248314‑M1/49‑14 (MQ=255) acTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCacttatttaacaact > 1:3411519‑M1/1‑35 (MQ=255) cTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCacttatttaacaactt > 1:5090771‑M1/1‑34 (MQ=255) cTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCacttatttaacaactt > 1:3113551‑M1/1‑34 (MQ=255) cTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCacttatttaacaactt < 1:5142290‑M1/50‑17 (MQ=255) tCCGCTATAGCTTTCTTCAGATCTTTATAGCCCacttatttaacaactt > 1:5341790‑M1/1‑33 (MQ=255) ccGCTATAGCTTTCTTCAGATCTTTATAGCCCacttatttaacaacttg > 1:6085563‑M1/1‑32 (MQ=255) cGCTATAGCTTTCTTCAGATCTTTATAGCCCacttatttaacaacttgaa < 1:5815173‑M1/50‑20 (MQ=255) cGCTATAGCTTTCTTCAGATCTTTATAGCCCacttatttaacaacttga < 1:5048103‑M1/49‑19 (MQ=255) cGCTATAGCTTTCTTCAGATCTTTATAGCCCacttatttaacaacttg < 1:1806051‑M1/48‑18 (MQ=255) cGCTATAGCTTTCTTCAGATCTTTATAGCCCacttatttaacaacttg < 1:6263429‑M1/48‑18 (MQ=255) gCTATAGCTTTCTTCAGATCTTTATAGCCCacttatttaacaacttgaaa < 1:3294309‑M1/50‑21 (MQ=255) gCTATAGCTTTCTTCAGATCTTTATAGCCCacttatttaacaacttgaaa < 1:3094556‑M1/50‑21 (MQ=255) gCTATAGCTTTCTTCAGATCTTTATAGCCCacttatttaacaacttgaa > 1:5825388‑M1/1‑30 (MQ=255) gCTATAGCTTTCTTCAGATCTTTATAGCCCacttatttaacaacttgaa > 1:4757647‑M1/1‑30 (MQ=255) tataGCTTTCTTCAGATCTTTATAGCCCacttatttaacaacttgaaaa > 1:3614602‑M1/1‑28 (MQ=255) taGCTTTCTTCAGATCTTTATAGCCCacttatttaacaacttgaaaataa < 1:1105652‑M1/50‑25 (MQ=255) taGCTTTCTTCAGATCTTTATAGCCCacttatttaacaacttgaaaata < 1:86901‑M1/49‑24 (MQ=255) taGCTTTCTTCAGATCTTTATAGCCCacttatttaacaacttgaaaat < 1:5055861‑M1/48‑23 (MQ=255) gCTTTCTTCAGATCTTTATAGCCCacttatttaacaacttgaaaataagg < 1:2626317‑M1/50‑27 (MQ=255) cTTTCTTCAGATCTTTATAGCCCacttatttaacaacttgaaaataaggt > 1:478310‑M1/1‑23 (MQ=255) cTTTCTTCAGATCTTTATAGCCCacttatttaacaacttgaaaataaggt < 1:5236153‑M1/50‑28 (MQ=255) cTTTCTTCAGATCTTTATAGCCCacttatttaacaacttgaaaataaggt < 1:1892432‑M1/50‑28 (MQ=255) cTTTCTTCAGATCTTTATAGCCCacttatttaacaacttgaaaataaggt < 1:1125998‑M1/50‑28 (MQ=255) cTTTCTTCAGATCTTTATAGCCCacttatttaacaacttgaaaataaggt > 1:3341587‑M1/1‑23 (MQ=255) tttCTTCAGATCTTTATAGCCCacttatttaacaacttgaaaataaggtg > 1:3223325‑M1/1‑22 (MQ=255) tttCTTCAGATCTTTATAGCCCacttatttaacaacttgaaaataaggtg > 1:4510530‑M1/1‑22 (MQ=255) ttcttcAGATCTTTATAGCCCacttatttaacaacttgaaaataaggtgt > 1:4278319‑M1/1‑21 (MQ=255) tcttcAGATCTTTATAGCCCacttatttaacaacttgaaaataaggtgtt > 1:3452070‑M1/1‑20 (MQ=255) tcttcAGATCTTTATAGCCCacttatttaacaacttgaaaataaggtgt < 1:6763998‑M1/49‑30 (MQ=255) tcttcAGATCTTTATAGCCCacttatttaacaacttgaaaataaggtg < 1:4214970‑M1/48‑29 (MQ=255) tcttcAGATCTTTATAGCCCacttatttaacaacttgaaaataaggtg < 1:2167372‑M1/48‑29 (MQ=255) tcAGATCTTTATAGCCCacttatttaacaacttgaaaataaggtgtttta > 1:6180501‑M1/1‑17 (MQ=255) cAGATCTTTATAGCCCgcttatttaacagcttgaaaataaggtgtttta < 1:6498096‑M1/49‑34 (MQ=255) cAGATCTTTATAGCCCacttatttaacaacttgaaaataaggtgttttac > 1:781860‑M1/1‑16 (MQ=255) cAGATCTTTATAGCCCacttatttaacaacttgaaaataaggtgttttac > 1:3113800‑M1/1‑16 (MQ=255) cAGATCTTTATAGCCCacttatttaacaacttgaaaataaggtgttttac > 1:4851926‑M1/1‑16 (MQ=255) cAGATCTTTATAGCCCacttatttaacaacttgaaaataaggtgtttta < 1:117061‑M1/49‑34 (MQ=255) cAGATCTTTATAGCCCacttatttaacaacttgaaaataaggtgtttta < 1:315826‑M1/49‑34 (MQ=255) cAGATCTTTATAGCCCacttatttaacaacttgaaaataaggtgtttta < 1:3786624‑M1/49‑34 (MQ=255) cAGATCTTTATAGCCCacttatttaacaacctgaaaataaggtgctctac > 1:6731177‑M1/1‑16 (MQ=255) aGATCTTTATAGCCCacttatttaacaacttgaaaataaggtgttttacc > 1:6231996‑M1/1‑15 (MQ=255) aGATCTTTATAGCCCacttatttaacaacttgaaaataaggtgttttacc > 1:5048365‑M1/1‑15 (MQ=255) aGATCTTTATAGCCCacttatttaacaacttgaaaataaggtgttttacc < 1:5648159‑M1/50‑36 (MQ=255) aGATCTTTATAGCCCacttatttaacaacttgaaaataaggtgttttac < 1:1844124‑M1/49‑35 (MQ=255) aGATCTTTATAGCCCacttatttaacaacttgaaaataaggtgttttac < 1:627645‑M1/49‑35 (MQ=255) aGATCTTTATAGCCCacttatttaacaacttgaaaataaggtgttttac < 1:1490253‑M1/49‑35 (MQ=255) aGATCTTTATAGCCCacttatttaacaacttgaaaataaggtgttttac < 1:3026413‑M1/49‑35 (MQ=255) gATCTTTATAGCCCacttatttaacaacttgaaaataaggtgttttacct > 1:1636526‑M1/1‑14 (MQ=255) gATCTTTATAGCCCacttatttaacaacttgaaaataaggtgttttacct < 1:4062971‑M1/50‑37 (MQ=255) gATCTTTATAGCCCacttatttaacaacttgaaaataaggtgttttacct > 1:2500300‑M1/1‑14 (MQ=255) aTCTTTATAGCCCacttatttaacaacttgaaaataaggtgttttacctg > 1:1764840‑M1/1‑13 (MQ=255) aTCTTTATAGCCCacttatttaacaacttgaaaataaggtgttttacctg > 1:347388‑M1/1‑13 (MQ=255) tCTTTATAGCCCacttatttaacaacttgaaaataaggtgttttacctgg > 1:4569736‑M1/1‑12 (MQ=255) cTTTATAGCCCacttatttaacaacttgaaaataaggtgttttacctggg > 1:3163291‑M1/1‑11 (MQ=255) tataGCCCacttatttaacaacttgaaaataaggtgttttacctgggttg > 1:171562‑M1/1‑8 (MQ=255) tataGCCCacttatttaacaacttgaaaataaggtgttttacctgggttg > 1:7365272‑M1/1‑8 (MQ=255) tataGCCCacttatttaacaacttgaaaataaggtgttttacctgggtt < 1:4347337‑M1/49‑42 (MQ=255) tataGCCCacttatttaacaacttgaaaataaggtgttttacctgggtt < 1:6359368‑M1/49‑42 (MQ=255) tataGCCCacttatttaacaacttgaaaataaggtgttttacctggg < 1:5521560‑M1/47‑40 (MQ=255) tataGCCCacttatttaacaacttgaaaataaggtgttttacctggg < 1:770588‑M1/47‑40 (MQ=255) tataGCCCacttatttaacaacttgaaaataaggtgttttacctgg < 1:523901‑M1/46‑39 (MQ=255) tataGCCCacttatttaacaacttgaaaataaggtgttttacctgg < 1:3505071‑M1/46‑39 (MQ=255) tataGCCCacttatttaacaacttgaaaataaggtgttttacctgg < 1:2370446‑M1/46‑39 (MQ=255) tataGCCCacttatttaacaacttgaaaataaggtgttt < 1:2385868‑M1/39‑32 (MQ=255) ataGCCCacttatttaacaacttgaaaataaggtgttttacctgggttgt > 1:5440769‑M1/1‑7 (MQ=255) taGCCCacttatttaacaacttgaaaataaggtgttttacctgggttgtt < 1:1943959‑M1/50‑45 (MQ=255) taGCCCacttatttaacaacttgaaaataaggtgttttacctgggttgt < 1:5049105‑M1/49‑44 (MQ=255) taGCCCacttatttaacaacttgaaaataaggtgttttacctgggttgt < 1:3660433‑M1/49‑44 (MQ=255) gCCCacttatttaacaacttgaaaataaggtgttttacctgggttgtta > 1:1443693‑M1/1‑4 (MQ=255) cccacttatttaacaacttgaaaataaggtgttttacctgggttgttaca < 1:5042492‑M1/50‑48 (MQ=255) cccacttatttaacaacttgaaaataaggtgttttacctgggttgttac > 1:7352228‑M1/1‑3 (MQ=255) ccacttatttaacaacttgaaaataaggtgttttacctgggttgttacaa < 1:2018638‑M1/50‑49 (MQ=255) ccacttatttaacaacttgaaaataaggtgttttacctgggttgttaca > 1:3635875‑M1/1‑2 (MQ=255) ccacttatttaacaacttgaaaataaggtgttttacctgggttgttaca > 1:6534060‑M1/1‑2 (MQ=255) cacttatttaacaacttgaaaataaggtgttttacctgggttgttacaaa < 1:5407923‑M1/50‑50 (MQ=255) | CTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAACAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCC > NC_000913/2994942‑2995040 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |