| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,558,699 | Δ6,790 bp | intZ–[eutA] | intZ, yffL, yffM, yffN, yffO, yffP, yffQ, yffR, yffS, [eutA] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2558699 | 2565488 | 6790 | 114 [0] | [0] 111 | intZ–[eutA] | intZ,yffL,yffM,yffN,yffO,yffP,yffQ,yffR,yffS,[eutA] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2558698 | 0 (0.000) | 88 (1.080) | 49/82 | 0.0 | 100% | intergenic (‑19/‑160) | eutB/intZ | ethanolamine ammonia‑lyase subunit alpha/CPZ‑55 prophage; putative phage integrase IntZ |
| ? | NC_000913 | 2565489 = | 0 (0.000) | coding (1396/1404 nt) | eutA | reactivating factor for ethanolamine ammonia‑lyase EutBC | |||||
Only 100 of 111 total aligned reads displayed.
ACCCAGCCACCCAGCGCCACCGCTGGCGAATACCGCATTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAG > NC_000913/2565443‑2565537 | gccgaacaatgtggtctttagtttcataagtcgttccctcaggaagGaaa > 1:2953046‑M2/47‑50 (MQ=255)gccgaacaatgtggtctttagtttcataagtcgttccctcaggaagGaaa > 1:2549581‑M2/47‑50 (MQ=255) ccgaacaatgtggtctttagtttcataagtcgttccctcaggaagGaaa < 1:7410387‑M2/4‑1 (MQ=255) ccgaacaatgtggtctttagtttcataagtcgttccctcaggaagGaaa < 1:60901‑M2/4‑1 (MQ=255) ccgaacaatgtggtctttagtttcataagtcgttccctcaggaagGAAAt < 1:3083420‑M2/5‑1 (MQ=255) ccgaacaatgtggtctttagtttcataagtcgttccctcaggaagGAAAt > 1:5045165‑M2/46‑50 (MQ=255) ccgaacaatgtggtctttagtttcataagtcgttccctcaggaagGAAAt > 1:5776792‑M2/46‑50 (MQ=255) ccgaacaatgtggtctttagtttcataagtcgttccctcaggaagGAAAt < 1:691178‑M2/5‑1 (MQ=255) cgaacaatgtggtctttagtttcataagtcgttccctcaggaagGAAATg > 1:6459179‑M2/45‑50 (MQ=255) cgaacaatgtggtctttagtttcataagtcgttccctcaggaagGAAATg < 1:1980666‑M2/6‑1 (MQ=255) aacaatgtggtctttagtttcataagtcgttccctcaggaagGAAATGc > 1:6623770‑M2/43‑49 (MQ=255) aacaatgtggtctttagcttcataagtcgttccctcaggaagGAAATGc > 1:1102841‑M2/43‑49 (MQ=255) caatgtggtctttagtttcataagtcgttccctcaggaagGAAATGCGAg < 1:4756357‑M2/10‑1 (MQ=255) aatgtggtctttagtttcataagtcgttccctcaggaagGAAATGCGAGt < 1:1304882‑M2/11‑1 (MQ=255) aatgtggtctttagtttcataagtcgttccctcaggaagGAAATGCGAGt < 1:3496852‑M2/11‑1 (MQ=255) atgtggtctttagtttcataagtcgttccctcaggaagGAAATGCGAGt > 1:5323607‑M2/39‑49 (MQ=255) atgtggtctttagtttcataagtcgttccctcaggaagGAAATGCGAGt > 1:5223189‑M2/39‑49 (MQ=255) atgtggtctttagtttcataagtcgttccctcaggaagGAAATGCGAGt > 1:6752261‑M2/39‑49 (MQ=255) atgtggtctttagtttcataagtcgttccctcaggaagGAAATGCGAGTg < 1:7081509‑M2/12‑1 (MQ=255) atgtggtctttagtttcataagtcgttccctcaggaagGAAATGCGAGTg < 1:6331978‑M2/12‑1 (MQ=255) gtggtctttagtttcataagtcgttccctcaggaagGAAATGCGAGTGAt > 1:6025276‑M2/37‑50 (MQ=255) tggtctttagtttcataagtcgttccctcaggaagGAAATGCGAGTGAtt < 1:5359218‑M2/15‑1 (MQ=255) tggtctttagtttcataagtcgttccctcaggaagGAAATGCGAGTGAtt < 1:5176363‑M2/15‑1 (MQ=255) tggtctttagtttcataagtcgttccctcaggaagGAAATGCGAGTGAtt < 1:5047804‑M2/15‑1 (MQ=255) tggtctttagtttcataagtcgttccctcaggaagGAAAGGCGAGTGAtt < 1:6447360‑M2/15‑1 (MQ=255) ggtctttagtttcataagtcgttccctcaggaagGAAATGCGAGTGAttt > 1:5422969‑M2/35‑50 (MQ=255) ctttagtttcataagtcgttccctcaggaagGAAATGCGAGTGATTtcac > 1:7335485‑M2/32‑50 (MQ=255) ctttagtttcataagtcgttccctcaggaagGAAATGCGAGTGATTtcac > 1:6352211‑M2/32‑50 (MQ=255) ctttagtttcataagtcgttccctcaggaagGAAATGCGAGTGATTtcac > 1:174123‑M2/32‑50 (MQ=255) tagtttcataagtcgttccctcaggaagGAAATGCGAGTGATTtcaccgt > 1:3821322‑M2/29‑50 (MQ=255) tagtttcataagtcgttccctcaggaagGAAATGCGAGTGATTtcaccg < 1:1610676‑M2/21‑1 (MQ=255) tagtttcataagtcgttccctcaggaagGAAATGCGAGTGATTtcacc < 1:5846209‑M2/20‑1 (MQ=255) agtttcataagtcgttccctcaggaagGAAATGCGAGTGATTtcaccgt < 1:1154562‑M2/22‑1 (MQ=255) gtttcataagtcgttccctcaggaagGAAATGCGAGTGATTtcaccgtca > 1:1732791‑M2/27‑50 (MQ=255) gtttcataagtcgttccctcaggaagGAAATGCGAGTGATTtcaccgtca > 1:708562‑M2/27‑50 (MQ=255) gtttcataagtcgttccctcaggaagGAAATGCGAGTGATTtcaccgtca > 1:3758944‑M2/27‑50 (MQ=255) gtttcataagtcgttccctcaggaagGAAATGCGAGTGATTtcaccgtca > 1:1231898‑M2/27‑50 (MQ=255) gtttcataagtcgttccctcaggaagGAAATGCGAGTGATTtcaccgtc < 1:403389‑M2/23‑1 (MQ=255) tcataagtcgttccctcaggaagGAAATGCGAGTGATTtcaccgtcaccg > 1:685220‑M2/24‑50 (MQ=255) tcataagtcgttccctcaggaagGAAATGCGAGTGATTtcaccgtcaccg > 1:2623729‑M2/24‑50 (MQ=255) tcataagtcgttccctcaggaagGAAATGCGAGTGATTtcaccgtcacc < 1:5821209‑M2/26‑1 (MQ=255) tcataagtcgttccctcaggaagGAAATGCGAGTGATTtcaccgtcacc < 1:588713‑M2/26‑1 (MQ=255) tcataagtcgttccctcaggaagGAAATGCGAGTGATTtcaccgtcacc < 1:6642152‑M2/26‑1 (MQ=255) tcataagtcgttccctcaggaagGAAATGCGAGTGATTtcaccgtcacc < 1:32039‑M2/26‑1 (MQ=255) tcataagtcgttccctcaggaagGAAATGCGAGTGATTtcaccgtcacc < 1:1970891‑M2/26‑1 (MQ=255) cataagtcgttccctcaggaagGAAATGCGAGTGATTtcaccgtcaccg < 1:4785634‑M2/27‑1 (MQ=255) cataagtcgttccctcaggaagGAAATGCGAGTGATTTCACCGTCACCgg > 1:5046580‑M2/23‑50 (MQ=255) ataagtcgttccctcaggaagGAAATGCGAGTGATTTCACCGTCACCgg > 1:4016561‑M2/22‑49 (MQ=255) ataagtcgttccctcaggaagGAAATGCGAGTGATTTCACCGTCACCgg < 1:4014426‑M2/28‑1 (MQ=255) ataagtcgttccctcaggaagGAAATGCGAGTGATTTCACCGTCACCgg > 1:5557830‑M2/22‑49 (MQ=255) ataagtcgttccctcaggaagGAAATGCGAGTGATTTCACCGTCACCGGc < 1:4011613‑M2/29‑1 (MQ=255) taagtcgttccctcaggaagGAAATGCGAGTGATTTCACCGTCACCGGca > 1:5083526‑M2/21‑50 (MQ=255) agtcgttccctcaggaagGAAATGCGAGTGATTTCACCGTCACCGGcaca < 1:1915383‑M2/32‑1 (MQ=255) agtcgttccctcaggaagGAAATGCGAGTGATTTCACCGTCACCGGcaca < 1:4544834‑M2/32‑1 (MQ=255) agtcgttccctcaggaagGAAATGCGAGTGATTTCACCGTCACCGGcaca < 1:350488‑M2/32‑1 (MQ=255) agtcgttccctcaggaagGAAATGCGAGTGATTTCACCGTCACCGGcaca < 1:2974339‑M2/32‑1 (MQ=255) agtcgttccctcaggaagGAAATGCGAGTGATTTCACCGTCACCGGcac < 1:1672007‑M2/31‑1 (MQ=255) agtcgttccctcaggaagGAAATGCGAGTGATTTCACCGTCACCGGcac > 1:3586418‑M2/19‑49 (MQ=255) gtcgttccctcaggaagGAAATGCGAGTGATTTCACCGTCACCGGCACaa < 1:6478865‑M2/33‑1 (MQ=255) gtcgttccctcaggaagGAAATGCGAGTGATTTCACCGTCACCGGCACaa > 1:6529642‑M2/18‑50 (MQ=255) tcgttccctcaggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAAc > 1:810741‑M2/17‑50 (MQ=255) cgttccctcaggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAAcc > 1:6304395‑M2/16‑50 (MQ=255) gttccctcaggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAAcc < 1:100996‑M2/35‑1 (MQ=255) gttccctcaggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAAcc < 1:7331755‑M2/35‑1 (MQ=255) gttccctcaggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAAcc > 1:2036380‑M2/15‑49 (MQ=255) gttccctcaggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAAcc < 1:6588392‑M2/35‑1 (MQ=255) gttccctcaggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAAcc < 1:3378636‑M2/35‑1 (MQ=255) ccctcaggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGAt < 1:2599491‑M2/38‑1 (MQ=255) ccctcaggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATc > 1:232524‑M2/12‑50 (MQ=255) cctcaggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATcc < 1:5322336‑M2/40‑1 (MQ=255) cctcaggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATcc > 1:7153560‑M2/11‑50 (MQ=255) cctcaggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATcc < 1:1649992‑M2/40‑1 (MQ=255) cctcaggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATcc > 1:6731091‑M2/11‑50 (MQ=255) ctcaggaagGAAATGCGAGTGATTTCACCGTCATCGGCACAACCGATCCg > 1:1558371‑M2/10‑50 (MQ=255) ctcaggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCg < 1:511549‑M2/41‑1 (MQ=255) ctcaggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCg > 1:114704‑M2/10‑50 (MQ=255) ctcaggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCg > 1:2490982‑M2/10‑50 (MQ=255) ctcaggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCg > 1:5882032‑M2/10‑50 (MQ=255) caggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGc > 1:3849911‑M2/8‑49 (MQ=255) aggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGcc < 1:5900513‑M2/43‑1 (MQ=255) aggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGcc < 1:7445908‑M2/43‑1 (MQ=255) aggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGcc > 1:1446843‑M2/7‑49 (MQ=255) aggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGc < 1:5812982‑M2/42‑1 (MQ=255) aggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCa < 1:2088415‑M2/44‑1 (MQ=255) aggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCa < 1:6627046‑M2/44‑1 (MQ=255) aggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCa < 1:4739206‑M2/44‑1 (MQ=255) ggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCa > 1:201520‑M2/6‑49 (MQ=255) gaagGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCaaa < 1:6223879‑M2/46‑1 (MQ=255) gaagGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCaa > 1:126936‑M2/5‑49 (MQ=255) aagGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCaaa > 1:4112135‑M2/4‑49 (MQ=255) aagGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCaaa > 1:7458882‑M2/4‑49 (MQ=255) aagGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCaaa > 1:7447565‑M2/4‑49 (MQ=255) aagGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCaaa > 1:2310099‑M2/4‑49 (MQ=255) agGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCaaaaa < 1:771360‑M2/48‑1 (MQ=255) agGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCaaaaa < 1:5025695‑M2/48‑1 (MQ=255) gGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAg < 1:3097262‑M2/49‑1 (MQ=255) gGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAg < 1:1715649‑M2/49‑1 (MQ=255) gaaATGCGAGTGATTTCATCGTCACCGGTACAACCGATCCGCCaaaaa > 1:106607/1‑48 (MQ=255) gaaATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCaaaaa > 1:4742724/1‑48 (MQ=255) gaaATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCaaaaa > 1:388258/1‑48 (MQ=255) | ACCCAGCCACCCAGCGCCACCGCTGGCGAATACCGCATTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAG > NC_000913/2565443‑2565537 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |