New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 22874488 (0.400)65 (0.310) 18/184 19.6 44.0% intergenic (+82/‑12) rrlH/rrfH 23S ribosomal RNA of rrnH operon/5S ribosomal RNA of rrnH operon
?NC_000913 2726224 = NA (NA)intergenic (‑36/+57) rrfG/rrlG 5S ribosomal RNA of rrnG operon/23S ribosomal RNA of rrnG operon
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 151 total aligned reads displayed.

ATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/228641‑228744
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tctgatTTAATCTGTATCAGGCTGAAAATCTTCTCTCATCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGCTCAAC  >  NC_000913/2726224‑2726321
                                                                                                                                                                                                            
ATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGACCGCAGAAGCGGT                                                                                                           >  1:2930156/1‑99
ATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGT                                                                                                           >  1:2953968/1‑99
ATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGT                                                                                                           >  2:2406888/1‑99
 TGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTC                                                                                                          >  1:2562384/1‑99
 TGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTC                                                                                                          >  1:5513051/1‑99
 TGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTC                                                                                                          <  2:4729328/99‑1
 TGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTC                                                                                                          >  1:1514194/1‑99
 TGAACCGCGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTC                                                                                                          <  1:1505912/99‑1
  GAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCT                                                                                                         <  1:1029315/99‑1
  GAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCT                                                                                                         <  1:1198609/99‑1
  GAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCT                                                                                                         <  2:5484870/99‑1
   AACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTG                                                                                                        >  1:4134493/1‑99
    ACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGA                                                                                                       >  1:1674752/1‑99
     CCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGAT                                                                                                      <  1:4485307/99‑1
     CCGTGAGGCATAACCTTACAACGCCGAGGTTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACACATTATATCAGAACGCAGAATCGGTCTGAT                                                                                                      <  2:3044816/99‑1
                                                              CAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAATCCGCCAAAACAGCTTCGGCGTTG                                            >  2:5101147/1‑99
                                                                    GATACAGATTAAATCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAATCCGCCAAAACACCTTCGGCGTTGTAAGGT                                      >  2:3750989/1‑99
                                                                     ATACAGATTAAATCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAATCCGCCAAAACAGCTTCGGCGTTGTAAGGTT                                     >  1:1081680/1‑99
                                                                         AGATTAAATCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAATCCGCCAAAACACCTTCGGCGTTGTAAGGTTAAGC                                 >  1:4740835/1‑99
                                                                         AGATTAAATCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCATCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCC                                >  2:2845048/1‑99
                                                                          GATTAAATCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAATCCGCCAAAACACCTTCGGCGTTGTAAGGTTAAGCC                                >  2:400117/1‑99
                                                                          GATTAAATCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAATCCGCCAAAACACCTTCGGCGTTGTAAGGTTAAGCC                                >  2:586642/1‑99
                                                                          GATTAAATCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAATCCGCCAAAACACCTTCGGCGTTGTAAGGTTAAGCC                                >  1:5234037/1‑99
                                                                          GATTAAATCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCATCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCT                               >  2:2137568/1‑99
                                                                          GATTAAATCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCATCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCT                               >  1:5419970/1‑99
                                                                          GATTAAATCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCATCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCT                               >  2:3491600/1‑99
                                                                           ATTAAATCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAATCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCT                               >  1:5465739/1‑99
                                                                           ATTAAATCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAATCCGCCAAAACACCTTCGGCGTTGTAAGGTTAAGCCT                               >  1:1406254/1‑99
                                                                           ATTAAATCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAATCCGCCAAAACACCTTCGGCGTTGTAAGGTTAAGCCT                               >  2:2644606/1‑99
                                                                           ATTAAATCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAATCCGCCAAAACACCTTCGCCTTGTAAGGGTAAACCcc                              >  2:4384950/1‑97
                                                                           ATTAAATCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCATCCGCCAAAACAGCTCCGGCGTTGTAAGGTTAAGCCTC                              >  2:4995557/1‑99
                                                                            TTAAATCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAATCCGCCAAAACACCTTCGGCGTTGTAAGGTTAAGCCTC                              >  1:2311602/1‑99
                                                                             TAAATCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCATCCGCCAAAACATCTTCGGCGTTGTAAGGTTAAGCCTCAC                            >  1:5432518/1‑99
                                                                               AATCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAATCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACG                           >  1:4452321/1‑99
                                                                               AATCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAATCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACG                           >  1:2319944/1‑99
                                                                               AATCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCATCCGCCAAAACATCTTCGGCGTTGTAAGGTTAAGCCTCACGG                          >  1:1205568/1‑99
                                                                               AATCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCATCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGG                          >  1:1457644/1‑99
                                                                               AATCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCATCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGG                          >  2:2388476/1‑99
                                                                               AATCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCATCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGG                          >  2:1069021/1‑99
                                                                                ATCCGAACGCAGAAGCGTTCTGATTTAACCTGTATCAGGCTGAAGATCTTCTCTCATCCGCCAAAACAGCTTCGGCGTTTTAAGCTTAAGCCTAACTGT                         >  2:1723851/1‑99
                                                                                ATCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAATCCGCCAAAACACCTTCGGCGTTGTAAGGTTAAGCCTCACGG                          >  1:3774567/1‑99
                                                                                ATCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAATCCGCCAAAACACCTTCGGCGTTGTAAGGTTAAGCCTCACGG                          >  2:5336399/1‑99
                                                                                ATCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAATCCGCCAAAACACCTTCGGCGTTGTAAGGTTAAGCCTCACGG                          >  2:488549/1‑99
                                                                                ATCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAATCCGCCAAAACACCTTCGGCGTTGTAAGGTTAAGCCTCACGG                          >  2:4388982/1‑99
                                                                                ATCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAATCCGCCAAAACACCTTCGGCGTTGTAAGGTTAAGCCTCACGG                          >  2:3621988/1‑99
                                                                                ATCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCACTCCGCCAAAACACCTTCGGCGTTGTAAGGTTAAGCCTCACGG                          >  1:101670/1‑99
                                                                                ATCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCATCCGCCAAAACGGCTTCGGCGTTGTAAGGTTAAGCCTCACGGT                         >  1:1952764/1‑99
                                                                                ATCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCATCCGCCAAAACATCTTCGGCGTTGTAAGGTTAAGCCTCACGGT                         >  1:1338339/1‑99
                                                                                ATCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCATCCGCCAAAACATCTTCGGCGTTGTAAGGTTAAGCCTCACGGT                         >  1:250967/1‑99
                                                                                ATCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCATCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGT                         >  2:2625604/1‑99
                                                                                ATCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCATCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGT                         >  2:1229454/1‑99
                                                                                 TCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAATCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGT                         >  1:535967/1‑99
                                                                                 TCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAATCCGCCAAAACACCTTCGGCGTTGTAAGGTTAAGCCTCACGGT                         >  1:1922233/1‑99
                                                                                   AGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCATCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCA                      >  2:28209/1‑99
                                                                                    GAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAATCCGCCAAAACACCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCA                      <  1:251862/99‑1
                                                                                     AACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAATCCGCCAAAACACCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCAT                     >  1:4022678/1‑99
                                                                                     AACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCATCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATT                    >  2:5308779/1‑99
                                                                                     AACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCATCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATT                    >  1:244926/1‑99
                                                                                       CGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAATCCGCCAAAACACCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTA                   >  2:4034114/1‑99
                                                                                              GCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCATCCGCCAAAACATCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGT           <  2:5315003/99‑1
                                                                                                  TCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCATCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGC       <  2:2963233/99‑1
                                                                                                  TCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCATCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGC       >  1:3812825/1‑99
                                                                                                  TCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCATCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGC       >  1:715671/1‑99
                                                                                                  TCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCATCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGC       >  2:526390/1‑99
                                                                                                  TCTGATTTAATCTATATCAGGCTGAAAATCTTCTCTCATTCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCGTCTCGGTTCATTATTAACGGTTAGt       >  2:2933966/1‑98
                                                                                                   CTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCATCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGCT      <  2:4447575/99‑1
                                                                                                   CTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCATCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGCT      <  1:1273528/99‑1
                                                                                                   CTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCATCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGCT      >  1:465849/1‑99
                                                                                                    TGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCATCGGCCAAAACAGCTTCGGCGTTGTAAGATTAAGCCTCACGCTTCATTAGTACCGGTTAGCTC     >  2:1332845/1‑99
                                                                                                    TGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCATCCGCCAAAACAGCTTCGGCGTTGTAAGTTTAAGCCTCACGGTGCATTAGTACCGGTTAGCTC     >  2:4931381/1‑99
                                                                                                    TGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCATCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGCTC     >  1:1909630/1‑99
                                                                                                    TGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCATCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGCTC     >  1:1553951/1‑99
                                                                                                    TGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCATCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGCTC     >  2:883207/1‑99
                                                                                                    TGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCATCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGCTC     >  2:3497093/1‑99
                                                                                                    TGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCATCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGCTC     >  1:3411871/1‑99
                                                                                                    TGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCATCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGCTC     >  1:2082919/1‑99
                                                                                                     GATTTAATCTGTATCAGGCTGAAAATCTTCTCTCATCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGCTCA    >  1:2491354/1‑99
                                                                                                     GATTTAATCTGTATCAGGCTGAAAATCTTCTCTCATCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGCTCA    >  1:906141/1‑99
                                                                                                     GATTTAATCTGTATCAGGCTGAAAATCTTCTCTCATCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGCTCA    >  1:4485124/1‑99
                                                                                                     GATTTAATCTGTATCAGGCTGAAAATCTTCTCTCATCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGCTCA    >  1:16848/1‑99
                                                                                                     GATTTAATCTGTATCAGGCTGAAAATCTTCTCTCATCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGCTCA    >  1:1565010/1‑99
                                                                                                     GATTTAATCTGTATCAGGCTGAAAATCTTCTCTCATCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGCTCA    >  2:1094135/1‑99
                                                                                                      ATTTAATCTGTATCAGGCTGAAAATCTTCTCTCATCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGCTCAA   >  2:912504/1‑99
                                                                                                      ATTTAATCTGTATCAGGCTGAAAATCTTCTCTCATCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGCTCAA   >  2:4737287/1‑99
                                                                                                      ATTTAATCTGTATCAGGCTGAAAATCTTCTCTCATCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGCTCAA   >  1:5072498/1‑99
                                                                                                      ATTTAATCTGTATCAGGCTGAAAATCTTCTCTCATCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGCTCAA   >  2:4613683/1‑99
                                                                                                      ATTTAATCTGTATCAGGCTGAAAATCTTCTCTCATCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGCTCAA   >  1:444199/1‑99
                                                                                                      ATTTAATCTGTATCAGGCTGAAAATCTTCTCTCATCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGCTCAA   >  2:3240511/1‑99
                                                                                                      ATTTAATCTGTATCAGGCTGAAAATCTTCTCTCATCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGCTCAA   >  2:1976162/1‑99
                                                                                                      ATTTAATCTGTATCAGGCTGAAAATCTTCTCTCATCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGCTCAA   >  1:2791358/1‑99
                                                                                                      ATTTAATCTGTATCAGGCTGAAAATCTTCTCTCATCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGCTCAA   <  2:170748/99‑1
                                                                                                       TTTAATCTGTATCAGGCTGAAAATCTTCTCTCATCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTCCCGGTTAGCTCAcc  >  2:7459/1‑97
                                                                                                       TTTAATCTGTATCAGGCTGAAAATCTTCTCTCATCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGCTCAAC  <  1:3354348/99‑1
                                                                                                       TTTAATCTGTATCAGGCTGAAAATCTTCTCTCATCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGCTCAAC  <  1:310904/99‑1
                                                                                                       TTTAATCTGTATCAGGCTGAAAATCTTCTCTCATCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGCTCAAC  <  2:1401065/99‑1
                                                                                                       TTTAATCTGTATCAGGCTGAAAATCTTCTCTCATCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGCTCAAC  <  2:1263225/99‑1
                                                                                                       TTTAATCTGTATCAGGCTGAAAATCTTCTCTCATCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGCTCAAC  <  1:4984882/99‑1
                                                                                                       TTTAATCTGTATCAGGCTGAAAATCTTCTCTCATCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGCTCAAC  >  1:1078074/1‑99
                                                                                                       TTTAATCTGTATCAGGCTGAAAATCTTCTCTCATCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGCTCAAC  >  1:5250736/1‑99
                                                                                                       TTTAATCTGTATCAGGCTGAAAATCTTCTCTCATCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGCTCAAC  <  1:2587641/99‑1
                                                                                                                                                                                                            
ATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/228641‑228744
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tctgatTTAATCTGTATCAGGCTGAAAATCTTCTCTCATCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGCTCAAC  >  NC_000913/2726224‑2726321

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.