Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913433,6490TG35.1% 36.1 / 10.5 57G65G (GGT→GGGribDfused diaminohydroxyphosphoribosylaminopyrimidine deaminase and 5‑amino‑6‑(5‑phosphoribosylamino) uracil reductase
Reads supporting (aligned to +/- strand):  ref base T (10/27);  new base G (12/8);  total (22/35)
Fisher's exact test for biased strand distribution p-value = 2.25e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.15e-01
Rejected as consensus: Frequency below/above cutoff threshold.

GAAGAGATCGCGCGCCTGGAGGACTAAGCCGTGCAGGACGAGTATTACATGGCGCGGGCGCTAAAGCTGGCGCAACGAGGACGTTTTACCACGCATCCCAACCCGAATGTCGGGTGCGTCATTGTCAAAGATGGCGAAATTGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGCGGGTGAAAAAGCCAAAGGTGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCATTGACGTCAGCCACGGCCTGATGATGAGTGAAGCCGAGCAATTGAATAAAGGCTTTCTCAAG  >  NC_000913/433425‑433874
                                                                                                                                                                                                                                    |                                                                                                                                                                                                                                   
aaagaacgcgcgcgCTGGGAGGACTAAGCCGTGAAGAGCGAGTTTTCCATGCCGCGGGCGAAAAAGCTGTCGCAACGAGGACTTTTTACCCCGCATCCCACCCCAAATGCCGGGGGCGTAATGGTCAAAGATGGCGAAATTGTCGGTGAAGGTTCCCACCACCGGGCGGGTGACCCACAGGCGGAAGTACACGCGTTGCGTATGGCGGGTGAAAAAGCCAAGGGTGCGa                                                                                                                                                                                                                                <  2:1757200/221‑1 (MQ=255)
              ccTGGAGGACTAAGCCGTGCAGGACGAGTATTACATGGCGCGGGCGCTAAAGCTGGCGCAACGAGGACGTTTTACCACGCATCCCAACCCGAATGTCGGGTGCGTCATTGTCAAAGATGGCGAAATTGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGCGGGGGAAAAAGCCAAAGGTGAGACCGCCt                                                                                                                                                                                                                          >  1:1931443/1‑221 (MQ=255)
                  gaggcttacgCCGTGCAGGACGGTATTGACATGGCCGGGGCGCTAAAGCGGGCCAAACGAGGACGTTTTACCACGCATCCAAACCGGATGGGCGGGTGGGTCATTGTAAAAGATGGCAAAATGGTCGTGGAAGTTTCCCCCCAACGTGCGGGTGAACCAAAGGCCGAAGTACCCGCGTTGCGTAGGGCGGGTGAAAAAGCCAAAGGTGCGACCGCCTATGTCACACTCg                                                                                                                                                                                                              <  2:1835612/220‑1 (MQ=255)
                   gggccTAAGCCGTGCAGGAGGAGTTTTACAGGGCGCGGGCGCTAAAGCTGGCGCAACGAGGATGTTTTACCACGCATCCAACCCCGAATGTCGGGTGCGTCTTTGTCAAAGAGGGCAAAATTGTCGGTGAGGGTTCCCACCAACGGGCGGGTGAACCACATGCCGAAGTACCCGCGTTGCGTAGGGGGGGTAAAAAAGCCAAGGGTGCGACCGCCTATGTCACACTCg                                                                                                                                                                                                              <  2:1890195/224‑1 (MQ=255)
                    ggaCTACGCGGGGCAGGAAGATTATTCAATGGCGCGGGCGATAAAGCTGGCGCAACGAGGGATTTTTCCCCCGCACCCCAGCCGGAATGTCGGAGGCGTCATTGTCAAAGGTGGCAAAATGTCGGGTGAAGGTTCCCACCAGCGTGGGGGTGACCCACATGCCGAAGTACCCGCGTTGCGTATGGGGGGTAAAAAAGCCAAAGGTGCGACCGCCTATGTCACACTCGaa                                                                                                                                                                                                            <  2:894341/229‑1 (MQ=255)
                         aaGCCGTGCAGGACGAGTATTACATGGCGCGGGCGCTAAAGCTGGCGCAACGAGGACGTTTTACCACGCATCCCAACCCGAATGTCGGGTGCGTCATTGTCAAAGATGGCGAAATTGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGCGGGGGAAAAAACCAAAGGGGCGGCCGCCCCTGTCCCACTCCAACCCTg                                                                                                                                                                                                       >  1:1022155/1‑229 (MQ=255)
                            ccgagcggggagAGTTTTACAGGGGCGGGCCCTAAAAGCGGGCGAAACGGGCACGTTTTACCACGCACCCAAACCCAAATGCGGGGTGCTTCATTGTCAAAGATGGCGAAATGGTGGGTAAAGTTTACCACCACGGTGCGGGTGAACCAAAGGCCGAAGTACCCGCGTTGCGTAGGGCGGGTAAAAAACCAAAAGGTGCGACCGCCTATGTCACACTCGAACCCTGTa                                                                                                                                                                                                     <  2:634126/217‑1 (MQ=255)
                               tGCAGGACGAGTATTACATGGCGCGGGCGCTAAAGCTGGCGCAACGAGGACGTTTTACCACGCATCCCAACCCGAATGTCGGGTGCGTCATTGTCAAAGATGGCGAAATTGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGCGGGGGAAAAAAACAAAGATGCGa                                                                                                                                                                                                                                >  1:654441/1‑198 (MQ=255)
                               ggCAGGACGAGTTTGACAGGGCGGGGGCGGTAAAGCGGGCGAAACGAGGAGGTTTTCCCCCGCATCCCAACCCTAATGTGGGGTGCGTAATTGTAAAAGATGGAGAAATTGCCGGTGAGGGTTACCCCCAAGGTGGGGTTAAACCAAATGCCGAAGTACACGCGTTGCGTATGGGGGGTGAAAAAGCCAAAGGTGCgg                                                                                                                                                                                                                                <  2:653289/197‑2 (MQ=255)
                                  agaaCGTGTATTCCATGGCGCGGTCGCTAAAGTTGGCGCAAGAAGGACGTTTTCCCACGCATCCCAACCCGATTGTCGGGTGCGTCATTGTCAAAGATGGCGAAATTGTCGGTGAAGTTTACCACCACCGTGGGGGTGAACCACAGGCCGAAGTCCACGCGTGGCTTATGGCGGGTAAAAAACCCAAAGGTGCGACCGCCTATGTCACACTCGAACCCTGTAGCcatca                                                                                                                                                                                              <  2:1196728/226‑1 (MQ=255)
                                       ttgTATCACAGGGCGGGGGGGCAAAAGCGGGCGCACGGAGGCCGTTTTCCCACGCCTCCAACCCAGAATGCCGGGTGCGTCATGTGCAAAGAGGGCGAAATTGTCGGGGAGGGTTACCACCACCGGGGGGGTGAACCACAGGCGGAGGTACCCGCGTTGCGTAGGGGGGGTAAAAAAGCCAAGGGGGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGTc                                                                                                                                                                                         <  2:726838/227‑1 (MQ=255)
                                         gTATTCCAGGGCGCGGGCGCAAAGGGTGGCCGAACGAGGCTGTTTTCCCACGCACCCCACCCCGAATGTCGGGGGCGTCATTGTAAAAGAGGGCGAAATTGTCGGTGAAGGTTCCCACCACCGGGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGGGGGTAAAAAAGCCAAAGGTGCGACCGCCTATGTCACACTCGAAcc                                                                                                                                                                                                          <  2:1059573/210‑1 (MQ=255)
                                         gTATTACATGGCGCGGGCGCTAAAGCTGGCGCAACGAGGACGTTTTACCACGCATCCCAACCCGAATGTCGGGTGCGTCATTGTCAAAGATGGCGAAATTGTCGGTGAAGGTTACCACCAACGTGCGGGGGAACCACATGCCGAAGTACACGCGTTGCGTATGGCGGGGGGAAAAACCAAAAGGGCGACCCCCTAGTGCCCACTCCAAcc                                                                                                                                                                                                          >  1:1061441/1‑210 (MQ=255)
                                           tgtcaCAGGGCGCGGACGATAAGGTGGGCGCAACGAGGCATTTTTCCCCCCCCCCCCAGCCCGAATGCGGGGGCGTTCAGTGGAAAAGAGGGGGAAATTGTGGGTAAAGGTTCCCCCCAGGGGGCGGGAGAACCCAATGCCGAAGTACAGGCGTTGCGTAGGGCGGGTAAAAAACCCAAGGGTGCAACCGCCTATGTCACACTCGAACCCTGTAGCCATCATgg                                                                                                                                                                                           <  2:5082/220‑1 (MQ=255)
                                                    gcgcGGGCGCTAAAGCTGGCGCAACGAGGACGTTTTACCACGCATCCCAACCCGAATGTCGGGTGCGTCATTGTCAAAGATGGCGAAATTGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGCGGGCGGAAAAGCCCAAGGTGCGGCCCGCCATGTCACTCTCTGACCCCGTCACCACCATAGTccgtc                                                                                                                                                                                     >  2:549868/1‑217 (MQ=255)
                                                     cgcgGGGGCTAAGGCGGGGGCAAGGGGGACGTTTTACCACGCATCCCACCCCGAATGTGGGGTGCGTAATTGTAAAAGATGGCAAAATTGTCGGTGAAGGTTCCCACCAACGGGCGGGTGAACCACATGCGGAAGTACCCGCGTTGCGTATGGCGGGTGAAAAAGCAAAAGGTGCGACCGCCTATGTCACACTCGa                                                                                                                                                                                                             <  2:372333/196‑1 (MQ=255)
                                                     cgcgGGCGCTAAAGCTGGCGCAACGAGGACGTTTTACCACGCATCCCAACCCGAATGTCGGGTGCGTCATTGTCAAAGATGGCGAAATTGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGCGGGGGAAAAAACCAAAGGGGCGACCCCCCATGTCacacccca                                                                                                                                                                                                             >  1:373006/1‑192 (MQ=255)
                                                                                                  ccaaccccGAAGGGCGGGTGCGTCATTGTCAAAAGGGGCGAAATTGGCGGTGAGGGTTACCACCAACGTGCGGGTAACCCACATGCCGAAGAACACGCGTTGCGTAGGGCGGGTAAAAAAGCAAAGGGTGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCt                                                                                                                               <  2:690712/224‑1 (MQ=255)
                                                                                                           aaggTCGGGTGCGTCATTGTAAAAGAGGGCGAAATTGTCGGTGAAGTTTACCACCACCGTGCGGGTAAACCACATGCCGAAGTCCCCGCTTTGCGTAGGGGGGGGGAAAAAGCCAAAGGTGCGACCGCCTATGTCACACTCg                                                                                                                                                                                                              <  2:1797133/139‑1 (MQ=255)
                                                                                                           aaTGTCGGGTGCGTCATTGTCAAAGATGGCGAAATTGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGCGGGGGAAAAAGCCAAAGGGGCGACCCCCCATTTCACAATCg                                                                                                                                                                                                              >  1:1800190/1‑142 (MQ=255)
                                                                                                                 gggTGCGTCATTGTCAAAGATGGCGAAATTGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGCGGGTGGAAAAGCCAAAGGGGCGACCGCCTATGTCACACtt                                                                                                                                                                                                               >  1:689956/1‑134 (MQ=255)
                                                                                                                 gggTGCGTCATTGTAAAAGATGGGGAAATTGTCGGGGAAGGTTACCACCAAGGTGGGGGTGACCCACATGCCGAAGTACACGGGTTGCGTATGGCGGGTGAAAAAGCCAAGGGTGCGACCGCCTATGTCACACTc                                                                                                                                                                                                               <  2:688745/135‑1 (MQ=255)
                                                                                                                  ggTGCGTCATTGTCAAAGATGGCGAAATTGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGCGGGGGGAAAAACCCAAGGGGCGCCCCCCTATGTCCCCATCGAACCCTTGAGCCATCATTGCCGTCCGCCCCCGTGCTGTGACGCACCCATCGCCGCTGGCGGAGCGCGCGCGGGTGCCTCCATGCAAGACCCTaa                                                                                                               >  2:1254233/1‑229 (MQ=255)
                                                                                                                      cGTCATTGTCAAAGATGGCGAAATTGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGCGGGGGGAAAAGCCAAAGGGGGGAACCCCCATGTCACACTCGGACCCCGTa                                                                                                                                                                                                     >  1:40997/1‑140 (MQ=255)
                                                                                                                      cGTCATTGTCAAAGATGGCGAAATTGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGCGGGGGAAAAAGCCCAAGGTGCGAACCCCTATGACACACTCGGACCCTGGAgaccccat                                                                                                                                                                                             >  1:1236294/1‑141 (MQ=255)
                                                                                                                      cGTCATTGTAAAAGATGGCAAATTGGTCGGGGAAGGTTACCACCAACGTGGGGGTGAACCACATGCCGAAGTCCCCGTGTTGCGTATGGCGGGGAAAAAAGCCAAAGGGGCGACCGCCTATGTCACACTCGAACCCTGTAGCcatcat                                                                                                                                                                                             <  2:1234145/148‑1 (MQ=255)
                                                                                                                         tCATTGTCAAAGATGGCGAAATTGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGCGGGTGAAAAAGCCAAAGGGGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGATCCTAACCCGCa                                                                                                         <  1:134101/229‑1 (MQ=255)
                                                                                                                                    ggtGGCGAAATTGGCGGTAAAGGTTCCCCCCAACGTGCGGGTGACCCACATGCCGAAGTACCCGCGTTGCGTATGGCGGGTGAAAAAGCCAAAGGTGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTg                                                                                                                                                                            <  1:778339/150‑1 (MQ=255)
                                                                                                                                       ggCGAAATTGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGCGGGGGAAAAAGCCAAAGGTGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATgg                                                                                                                                                                                           >  1:393296/1‑134 (MQ=255)
                                                                                                                                       ggCAAAATTGTCGGTGAGGTTTCCCACCAGCGGGGGGGTAAACCACAGGCCAAATTCCACGCGTTGCGTTGGGGGGGTGAAAAAGCCAAAGGTGCGCCCGCCTATGTCACACTCGAACCCTGTAGCCATCATgg                                                                                                                                                                                           <  2:392585/134‑1 (MQ=255)
                                                                                                                                         cGAAATTGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGCGGGTGAAAAAGACCAAGGGGGGAACGCCCATGTCACACCCGAACCCCGTAGCCACCCTGGCCGGACCCCACCGGGCTGTGACGCACCCATCGCCCCTGGCGGAGCGCCCGCGGGTGCCCCGAGTGAAGATCCCAACCCCCCGGTCgacgtgggtgga                                                                                         >  2:1365718/1‑218 (MQ=255)
                                                                                                                                         cGAAATTGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGCGGGGGAAAAAGCCAAAGGTGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCAAGGTCGGACGCCACCCGGCTGTGACg                                                                                                                                                                    >  1:405879/1‑155 (MQ=255)
                                                                                                                                         agAAATTGTCGGTGAAGTTTCCCACCACCGTGCGGGTAAACCACAGGCCGAAGTACACGCGTTGCGTATGGCGGGTGAAAAAGCCAAAGGTGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACg                                                                                                                                                                    <  2:405147/154‑1 (MQ=255)
                                                                                                                                                                     aCGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGCGGGGGAAAAAGCCAAAGGTGCGACCGCCCATGGCACACTCGAACCCTGTAGCCATCATGGGCGTACGccc                                                                                                                                                                                 >  1:1274973/1‑114 (MQ=255)
                                                                                                                                                                     aCGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGCGGGGGAAAAAACCAAAGGGGCGACCGCCCATGTCACACCCGAACCCCGTAGCCCTCATGGTCGGACGCCCCCCTGCCGTTACCCACCCACCGCCCCTGGCGTAGCCCGCCGGGTTGCCCGCGTTCAAAGTCCCCAACCCCCGGGGGCTGGGCGCGGGCTTTACCGCCCGCAAcctgcgtgcta                                                               >  2:1616900/1‑218 (MQ=255)
                                                                                                                                                                     aCGGGCGGGTAACCCACATCCCGAAGTACACGCGTTGCTTAGGGCGGGTAAAAAACCAAAAGGGGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCa                                                                                                                                                                                 <  2:1272757/115‑1 (MQ=255)
                                                                                                                                                                                acccACATGCCGAAGTACACGCGTTGCGTATGGCGGGTAAAAAAGCCAAAGGTGCACCCGCCTATGTCACACTCGAATCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCATTGACGTCAGCCa                                                   <  1:1727341/227‑1 (MQ=255)
                                                                                                                                                                                aaCCACGTGCGGAAGTACACGCGTGGCGTATGGCGGGTGAAAAGGCCAAAGGTGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCATTGACGTCAGCCa                                                   <  1:1475723/229‑1 (MQ=255)
                                                                                                                                                                                    ccaTGCCGAAGTCCCCGCGTGGCGTAGGGGGGGGTAAAAACCCAAGGGGGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCATTGACGTCAGCCa                                                   <  1:1256415/224‑1 (MQ=255)
                                                                                                                                                                                    acaTGCCGAGGTACCCGCGTTGCTTAGGGCGGGTGAAAAAGCAAAAGGGGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCATTGACGTCAGCCa                                                   <  1:40124/225‑1 (MQ=255)
                                                                                                                                                                                               tACCCGCTTTGCGTATGGGGGTTAAAAAACCCAAAGGTGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCt                                                                                                                               <  1:1030688/138‑1 (MQ=255)
                                                                                                                                                                                                       ttGCGTTGGGCGGGTAAAAAAGCCAAAGGGGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCATTGACGTCAGCCACg                                                 <  1:630278/208‑1 (MQ=255)
                                                                                                                                                                                                       ttGCGTATGGCGGGTGAAAAAGCCAAAGGTGCGACCGcc                                                                                                                                                                                                                           >  1:615564/1‑39 (MQ=255)
                                                                                                                                                                                                       ttGCGTATGGCGGGTGAAAAAGCCAAAGGTGCGACCGcc                                                                                                                                                                                                                           <  2:614486/39‑1 (MQ=255)
                                                                                                                                                                                                         gCGTATGGCGGGTGAAAAAGCCAAAGGGGCGACCGCCTATGTCACACTCGaa                                                                                                                                                                                                            >  1:379373/1‑52 (MQ=255)
                                                                                                                                                                                                         gCGTATGGCGGGGGAAAAAACCCAAAGGGCGACCGCCTATGTCACACCCGAACCCCGTAACCATCAAGGTCGTACGCCACCGTGCTGTGACACACACATCCCCCCTGGCGTAGCGCGAGTGGGTGCCCCGGTGCAAGAACCTAACCCACACGGCGCCGGGCGTGGGGTTTTGCGTCTGGAACAGGCTGGGCTTGACCTCAGCCACCGCCTGGTTGTGAGTGAAGCCgcg                          >  2:698928/1‑227 (MQ=255)
                                                                                                                                                                                                         gCGTATGGCGGGGGAAAAAACCAAAAGTGCGACCCCCCATGTCACCCCCGAACCCCGTAGCCATCATGGTCGTACGCCACCCTGCTGTGGCGCACCCCTCGCCGCCGGCGTAGCGCGCCTGGTTGCCTCGATGCAAGATCCTAACCCCCAGGGCGCTGGGCGTGGGCTTTACCGTCTGCAACAGGCTGGCATTGACGTCAGCCACGGCCTGATGATGAGGGGAGCCgcg                          >  2:438827/1‑227 (MQ=255)
                                                                                                                                                                                                          cGTATGGGGGGGGAAAAAGCCAAAGGTGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCATTGACGTCAGCCACGGCCTGATGATGAGTGAAGCCGAg                          <  1:439610/228‑1 (MQ=255)
                                                                                                                                                                                                           cttagggcggTTAAAAAGCCCAAGGTGGCAGCCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCATTGACGTCAGCCACGGCCTGATGATGAGTGAAGCCGAg                          <  1:1725523/220‑1 (MQ=255)
                                                                                                                                                                                                             aTGGCGGGAGAAAGGGCCAAGGGTCCGCCCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCATTGACGTCAGCCACGGCCTGATGATGAGTGAAGCCGAGCAAt                      <  1:1101205/229‑1 (MQ=255)
                                                                                                                                                                                                                ggggggGAAAAAGCAAAAGGTGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCa                                                                                                                        <  1:335093/126‑1 (MQ=255)
                                                                                                                                                                                                                    ttaaagaggCCAAGGGTGCGGCCGCCTATGTCACGCTCGACCCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCATTGACGTCAGCCACGGCCTGATGATGAGTGAAGCCGAGCAATTGAATa                <  1:1256466/220‑1 (MQ=255)
                                                                                                                                                                                                                    gTGAAAAAGCCAAGGGGGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGt                                                                                            <  1:514265/152‑1 (MQ=255)
                                                                                                                                                                                                                    gTGAAAAAGCCAAAGGGGCGACCCCCTATTTCCCACCCCAACCCCGTAGCCATCATGGTCGTACGCCACCCTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCCCGATGCAAAATCCTAACCCCCAGGTCGCTGGGCGGGGGCCTTTCCCTCTGCAACAGGCTGGCATTGACGTCAGCCCACGCCCGAAGATGAATGAAACCGAGCAATTGaaaa                >  2:905191/1‑226 (MQ=255)
                                                                                                                                                                                                                    gTGAAAAAGCAAAAGGTGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCaa                                                                          <  1:311635/170‑1 (MQ=255)
                                                                                                                                                                                                                           aGCCAAAGGTGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCCTGGGCGTACGCCACCGGGCTGTGACGCACTCATCCCCGCCGGCGTAGCGCGCGTGGGTGCCTCGATGGAAGGTCCTAACCCGCCGGGCCGCGGGCGGGGGCCTTTCCGTCCGCAAAAGGGCGGCATTGACGGCCGCCACGGCCTGGTGGTGGGGGGAGCCGCGGCATTGGATTAAgggctt        >  2:187619/1‑225 (MQ=255)
                                                                                                                                                                                                                                 gggTGGGACCGCCTATGTCCCACTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCATTGACGTCAGCCACGGCCTGATGATGAGTGAAGCCGAGCAATTGAATAAAGGCTTTCTCAAg  <  1:906770/228‑1 (MQ=255)
                                                                                                                                                                                                                                    |                                                                                                                                                                                                                                   
GAAGAGATCGCGCGCCTGGAGGACTAAGCCGTGCAGGACGAGTATTACATGGCGCGGGCGCTAAAGCTGGCGCAACGAGGACGTTTTACCACGCATCCCAACCCGAATGTCGGGTGCGTCATTGTCAAAGATGGCGAAATTGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGCGGGTGAAAAAGCCAAAGGTGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCATTGACGTCAGCCACGGCCTGATGATGAGTGAAGCCGAGCAATTGAATAAAGGCTTTCTCAAG  >  NC_000913/433425‑433874

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 6 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: