Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 433,649 | 0 | T | G | 35.1% | 36.1 / 10.5 | 57 | G65G (GGT→GGG) | ribD | fused diaminohydroxyphosphoribosylaminopyrimidine deaminase and 5‑amino‑6‑(5‑phosphoribosylamino) uracil reductase |
Reads supporting (aligned to +/- strand): ref base T (10/27); new base G (12/8); total (22/35) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 2.25e-02 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.15e-01 | |||||||||||
Rejected as consensus: Frequency below/above cutoff threshold. |
GAAGAGATCGCGCGCCTGGAGGACTAAGCCGTGCAGGACGAGTATT‑ACATGGCGCGGGCGCT‑AAAGCTGGCGCAACGAGGACGTTTTACCACGCATCCCAACCCGAATGTCGGGTGCG‑TCATTGTCAAAGATGGCGAAATTGTC‑GGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGCGGGTGAAAAAGCCAAAGGT‑GCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTG‑CCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCATTGACGTCAGCCACGGCCTGATGATGAGTGAAGCCGAGCAATTGAATAAAGGCTTTCTCAAG > NC_000913/433425‑433874 | aaagaacgcgcgcgCTGGGAGGACTAAGCCGTGAAGAGCGAGTTTT‑CCATGCCGCGGGCGAA‑AAAGCTGTCGCAACGAGGACTTTTTACCCCGCATCCCACCCCAAATGCCGGGGGCG‑TAATGGTCAAAGATGGCGAAATTGTC‑GGTGAAGGTTCCCACCACCGGGCGGGTGACCCACAGGCGGAAGTACACGCGTTGCGTATGGCGGGTGAAAAAGCCAAGGGT‑GCGa < 2:1757200/221‑1 (MQ=255) ccTGGAGGACTAAGCCGTGCAGGACGAGTATT‑ACATGGCGCGGGCGCT‑AAAGCTGGCGCAACGAGGACGTTTTACCACGCATCCCAACCCGAATGTCGGGTGCG‑TCATTGTCAAAGATGGCGAAATTGTC‑GGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGCGGGGGAAAAAGCCAAAGGT‑GAGACCGCCt > 1:1931443/1‑221 (MQ=255) gaggcttacgCCGTGCAGGACG‑GTATTGACATGGCCGGGGCGCT‑AAAGCGGGCCAAACGAGGACGTTTTACCACGCATCCAAACCGGATGGGCGGGTGGG‑TCATTGTAAAAGATGGCAAAATGGTC‑GTGGAAGTTTCCCCCCAACGTGCGGGTGAACCAAAGGCCGAAGTACCCGCGTTGCGTAGGGCGGGTGAAAAAGCCAAAGGT‑GCGACCGCCTATGTCACACTCg < 2:1835612/220‑1 (MQ=255) gggccTAAGCCGTGCAGGAGGAGTTTT‑ACAGGGCGCGGGCGCT‑AAAGCTGGCGCAACGAGGATGTTTTACCACGCATCCAACCCCGAATGTCGGGTGCG‑TCTTTGTCAAAGAGGGCAAAATTGTC‑GGTGAGGGTTCCCACCAACGGGCGGGTGAACCACATGCCGAAGTACCCGCGTTGCGTAGGGGGGGTAAAAAAGCCAAGGGT‑GCGACCGCCTATGTCACACTCg < 2:1890195/224‑1 (MQ=255) ggaCTACGCGGGGCAGGAAGATTATT‑CAATGGCGCGGGCGAT‑AAAGCTGGCGCAACGAGGGATTTTTCCCCCGCACCCCAGCCGGAATGTCGGAGGCG‑TCATTGTCAAAGGTGGC‑AAAATGTCGGGTGAAGGTTCCCACCAGCGTGGGGGTGACCCACATGCCGAAGTACCCGCGTTGCGTATGGGGGGTAAAAAAGCCAAAGGT‑GCGACCGCCTATGTCACACTCGaa < 2:894341/229‑1 (MQ=255) aaGCCGTGCAGGACGAGTATT‑ACATGGCGCGGGCGCT‑AAAGCTGGCGCAACGAGGACGTTTTACCACGCATCCCAACCCGAATGTCGGGTGCG‑TCATTGTCAAAGATGGCGAAATTGTC‑GGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGCGGGGGAAAAAACCAAAGGG‑GCGGCCGCCCCTGTCCCACTCCAACCCTg > 1:1022155/1‑229 (MQ=255) ccgagcggggagAGTTTT‑ACA‑GGGGCGGGCCCTAAAAGCGGGCGAAACGGGCACGTTTTACCACGCACCCAAACCCAAATGCGGGGTGCT‑TCATTGTCAAAGATGGCGAAATGGTG‑GGTAAAGTTTACCACCACGGTGCGGGTGAACCAAAGGCCGAAGTACCCGCGTTGCGTAGGGCGGGTAAAAAACCAAAAGGT‑GCGACCGCCTATGTCACACTCGAACCCTGTa < 2:634126/217‑1 (MQ=255) tGCAGGACGAGTATT‑ACATGGCGCGGGCGCT‑AAAGCTGGCGCAACGAGGACGTTTTACCACGCATCCCAACCCGAATGTCGGGTGCG‑TCATTGTCAAAGATGGCGAAATTGTC‑GGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGCGGGGGAAAAAAACAAAGAT‑GCGa > 1:654441/1‑198 (MQ=255) ggCAGGACGAGTTTG‑ACAGGGCGGGGGCGGT‑AAAGCGGGCGAAACGAGGAGGTTTTCCCCCGCATCCCAACCCTAATGTGGGGTGCG‑TAATTGTAAAAGATGGAGAAATTGCC‑GGTGAGGGTTACCCCCAAGGTGGGGTTAAACCAAATGCCGAAGTACACGCGTTGCGTATGGGGGGTGAAAAAGCCAAAGGT‑GCgg < 2:653289/197‑2 (MQ=255) agaaCGTGTATT‑CCATGGCGCGGTCGCT‑AAAGTTGGCGCAAGAAGGACGTTTTCCCACGCATCCCAACCCGATTGTCGGGTGCG‑TCATTGTCAAAGATGGCGAAATTGTC‑GGTGAAGTTTACCACCACCGTGGGGGTGAACCACAGGCCGAAGTCCACGCGTGGCTTATGGCGGGTAAAAAACCCAAAGGT‑GCGACCGCCTATGTCACACTCGAACCCTGTAGCcatca < 2:1196728/226‑1 (MQ=255) ttgTATC‑ACAGGGCGGGGGGGCA‑AAAGCGGGCGCACGGAGGCCGTTTTCCCACGCCTCCAACCCAGAATGCCGGGTGCG‑TCATGTGCAAAGAGGGCGAAATTGTC‑GGGGAGGGTTACCACCACCGGGGGGGTGAACCACAGGCGGAGGTACCCGCGTTGCGTAGGGGGGGTAAAAAAGCCAAGGGG‑GCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGTc < 2:726838/227‑1 (MQ=255) gTATT‑CCAGGGCGCGGGCGCA‑AAGGGTGGCCGAACGAGGCTGTTTTCCCACGCACCCCACCCCGAATGTCGGGGGCG‑TCATTGTAAAAGAGGGCGAAATTGTC‑GGTGAAGGTTCCCACCACCGGGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGGGGGTAAAAAAGCCAAAGGT‑GCGACCGCCTATGTCACACTCGAAcc < 2:1059573/210‑1 (MQ=255) gTATT‑ACATGGCGCGGGCGCT‑AAAGCTGGCGCAACGAGGACGTTTTACCACGCATCCCAACCCGAATGTCGGGTGCG‑TCATTGTCAAAGATGGCGAAATTGTC‑GGTGAAGGTTACCACCAACGTGCGGGGGAACCACATGCCGAAGTACACGCGTTGCGTATGGCGGGGGGAAAAACCAAAAGG‑GCGACCCCCTAGTGCCCACTCCAAcc > 1:1061441/1‑210 (MQ=255) tgtcaCAGGGCGCGGACGAT‑AAGGTGGGCGCAACGAGGCATTTTTCCCCCCCCCCCCAGCCCGAATG‑CGGGGGCGTTCAGTGGAAAAGAGGGGGAAATTGTG‑GGTAAAGGTTCCCCCCAGGGGGCGGGAGAACCCAATGCCGAAGTACAGGCGTTGCGTAGGGCGGGTAAAAAACCCAAGGGT‑GCAACCGCCTATGTCACACTCGAACCCTGTAGCCATCATgg < 2:5082/220‑1 (MQ=255) gcgcGGGCGCT‑AAAGCTGGCGCAACGAGGACGTTTTACCACGCATCCCAACCCGAATGTCGGGTGCG‑TCATTGTCAAAGATGGCGAAATTGTC‑GGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGCGGGCGGAAAAGCCCAAGGT‑GCGGCCCGCCATGTCACTCTCTGACCCCGTCACCACCATAGTccgtc > 2:549868/1‑217 (MQ=255) cgcgGGGGCT‑AAGGCGGGGGCAAGGGGGACGTTTTACCACGCATCCCACCCCGAATGTGGGGTGCG‑TAATTGTAAAAGATGGCAAAATTGTC‑GGTGAAGGTTCCCACCAACGGGCGGGTGAACCACATGCGGAAGTACCCGCGTTGCGTATGGCGGGTGAAAAAGCAAAAGGT‑GCGACCGCCTATGTCACACTCGa < 2:372333/196‑1 (MQ=255) cgcgGGCGCT‑AAAGCTGGCGCAACGAGGACGTTTTACCACGCATCCCAACCCGAATGTCGGGTGCG‑TCATTGTCAAAGATGGCGAAATTGTC‑GGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGCGGGGGAAAAAACCAAAGGG‑GCGACCCCCCATGTCacacccca > 1:373006/1‑192 (MQ=255) ccaaccccGAAGGGCGGGTGCG‑TCATTGTCAAAAGGGGCGAAATTGGC‑GGTGAGGGTTACCACCAACGTGCGGGTAACCCACATGCCGAAGAACACGCGTTGCGTAGGGCGGGTAAAAAAGCAAAGGGT‑GCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTG‑CCt < 2:690712/224‑1 (MQ=255) aaggTCGGGTGCG‑TCATTGTAAAAGAGGGCGAAATTGTC‑GGTGAAGTTTACCACCACCGTGCGGGTAAACCACATGCCGAAGTCCCCGCTTTGCGTAGGGGGGGGGAAAAAGCCAAAGGT‑GCGACCGCCTATGTCACACTCg < 2:1797133/139‑1 (MQ=255) aaTGTCGGGTGCG‑TCATTGTCAAAGATGGCGAAATTGTC‑GGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGCGGGGGAAAAAGCCAAAGGG‑GCGACCCCCCATTTCACAATCg > 1:1800190/1‑142 (MQ=255) gggTGCG‑TCATTGTCAAAGATGGCGAAATTGTC‑GGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGCGGGTGGAAAAGCCAAAGGG‑GCGACCGCCTATGTCACACtt > 1:689956/1‑134 (MQ=255) gggTGCG‑TCATTGTAAAAGATGGGGAAATTGTC‑GGGGAAGGTTACCACCAAGGTGGGGGTGACCCACATGCCGAAGTACACGGGTTGCGTATGGCGGGTGAAAAAGCCAAGGGT‑GCGACCGCCTATGTCACACTc < 2:688745/135‑1 (MQ=255) ggTGCG‑TCATTGTCAAAGATGGCGAAATTGTC‑GGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGCGGGGGGAAAAACCCAAGGG‑GCGCCCCCCTATGTCCCCATCGAACCCTTGAGCCATCATTGCCGTCCGCCCCCGTGCTGTGACGCACCCATCGCCGCTGGCGGAGCGCGCGCGGGTG‑CCTCCATGCAAGACCCTaa > 2:1254233/1‑229 (MQ=255) cG‑TCATTGTCAAAGATGGCGAAATTGTC‑GGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGCGGGGGGAAAAGCCAAAGGG‑GGGAACCCCCATGTCACACTCGGACCCCGTa > 1:40997/1‑140 (MQ=255) cG‑TCATTGTCAAAGATGGCGAAATTGTC‑GGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGCGGGGGAAAAAGCCCAAGGT‑GCGAACCCCTATGACACACTCGGACCCTGGAgaccccat > 1:1236294/1‑141 (MQ=255) cG‑TCATTGTAAAAGATGGCAAATTGGTC‑GGGGAAGGTTACCACCAACGTGGGGGTGAACCACATGCCGAAGTCCCCGTGTTGCGTATGGCGGGGAAAAAAGCCAAAGGG‑GCGACCGCCTATGTCACACTCGAACCCTGTAGCcatcat < 2:1234145/148‑1 (MQ=255) tCATTGTCAAAGATGGCGAAATTGTC‑GGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGCGGGTGAAAAAGCCAAAGGG‑GCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTG‑CCTCGATGCAAGATCCTAACCCGCa < 1:134101/229‑1 (MQ=255) ggtGGCGAAATTGGC‑GGTAAAGGTTCCCCCCAACGTGCGGGTGACCCACATGCCGAAGTACCCGCGTTGCGTATGGCGGGTGAAAAAGCCAAAGGT‑GCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTg < 1:778339/150‑1 (MQ=255) ggCGAAATTGTC‑GGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGCGGGGGAAAAAGCCAAAGGT‑GCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATgg > 1:393296/1‑134 (MQ=255) ggCAAAATTGTC‑GGTGAGGTTTCCCACCAGCGGGGGGGTAAACCACAGGCCAAATTCCACGCGTTGCGTTGGGGGGGTGAAAAAGCCAAAGGT‑GCGCCCGCCTATGTCACACTCGAACCCTGTAGCCATCATgg < 2:392585/134‑1 (MQ=255) cGAAATTGTC‑GGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGCGGGTGAAAAAGACCAAGGG‑GGGAACGCCCATGTCACACCCGAACCCCGTAGCCACCCTGGCCGGACCCCACCGGGCTGTGACGCACCCATCGCCCCTGGCGGAGCGCCCGCGGGTG‑CCCCGAGTGAAGATCCCAACCCCCCGGTCgacgtgggtgga > 2:1365718/1‑218 (MQ=255) cGAAATTGTC‑GGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGCGGGGGAAAAAGCCAAAGGT‑GCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCAAGGTCGGACGCCACCCGGCTGTGACg > 1:405879/1‑155 (MQ=255) agAAATTGTC‑GGTGAAGTTTCCCACCACCGTGCGGGTAAACCACAGGCCGAAGTACACGCGTTGCGTATGGCGGGTGAAAAAGCCAAAGGT‑GCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACg < 2:405147/154‑1 (MQ=255) aCGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGCGGGGGAAAAAGCCAAAGGT‑GCGACCGCCCATGGCACACTCGAACCCTGTAGCCATCATGGGCGTACGccc > 1:1274973/1‑114 (MQ=255) aCGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGCGGGGGAAAAAACCAAAGGG‑GCGACCGCCCATGTCACACCCGAACCCCGTAGCCCTCATGGTCGGACGCCCCCCTGCCGTTACCCACCCACCGCCCCTGGCGTAGCCCGCCGGGTTGCCCGCGTTCAAAGTCCCCAACCC‑CCGGGGGCTGGGCGCGGGCTTTACCGCCCGCAAcctgcgtgcta > 2:1616900/1‑218 (MQ=255) aCGGGCGGGTAACCCACATCCCGAAGTACACGCGTTGCTTAGGGCGGGTAAAAAACCAAAAGGG‑GCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCa < 2:1272757/115‑1 (MQ=255) acccACATGCCGAAGTACACGCGTTGCGTATGGCGGGTAAAAAAGCCAAAGGT‑GCACCCGCCTATGTCACACTCGAATCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTG‑CCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCATTGACGTCAGCCa < 1:1727341/227‑1 (MQ=255) aaCCACGTGCGGAAGTACACGCGTGGCGTATGGCGGGTGAAAAGGCCAAAGGT‑GCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTG‑CCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCATTGACGTCAGCCa < 1:1475723/229‑1 (MQ=255) ccaTGCCGAAGTCCCCGCGTGGCGTAGGGGGGGGTAAAAACCCAAGGGG‑GCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTG‑CCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCATTGACGTCAGCCa < 1:1256415/224‑1 (MQ=255) acaTGCCGAGGTACCCGCGTTGCTTAGGGCGGGTGAAAAAGCAAAAGGG‑GCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTG‑CCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCATTGACGTCAGCCa < 1:40124/225‑1 (MQ=255) tACCCGCTTTGCGTATGGGGGTTAAAAAACCCAAAGGT‑GCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTG‑CCt < 1:1030688/138‑1 (MQ=255) ttGCGTTGGGCGGGTAAAAAAGCCAAAGGG‑GCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTG‑CCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCATTGACGTCAGCCACg < 1:630278/208‑1 (MQ=255) ttGCGTATGGCGGGTGAAAAAGCCAAAGGT‑GCGACCGcc > 1:615564/1‑39 (MQ=255) ttGCGTATGGCGGGTGAAAAAGCCAAAGGT‑GCGACCGcc < 2:614486/39‑1 (MQ=255) gCGTATGGCGGGTGAAAAAGCCAAAGGG‑GCGACCGCCTATGTCACACTCGaa > 1:379373/1‑52 (MQ=255) gCGTATGGCGGGGGAAAAAACCCAAAGG‑GCGACCGCCTATGTCACACCCGAACCCCGTAACCATCAAGGTCGTACGCCACCGTGCTGTGACACACACATCCCCCCTGGCGTAGCGCGAGTGGGTG‑CCCCGGTGCAAGAACCTAACCCACACGGCGCCGGGCGTGGGGTTTTGCGTCTGGAACAGGCTGGGCTTGACCTCAGCCACCGCCTGGTTGTGAGTGAAGCCgcg > 2:698928/1‑227 (MQ=255) gCGTATGGCGGGGGAAAAAACCAAAAGT‑GCGACCCCCCATGTCACCCCCGAACCCCGTAGCCATCATGGTCGTACGCCACCCTGCTGTGGCGCACCCCTCGCCGCCGGCGTAGCGCGCCTGGTTG‑CCTCGATGCAAGATCCTAACCCCCAGGGCGCTGGGCGTGGGCTTTACCGTCTGCAACAGGCTGGCATTGACGTCAGCCACGGCCTGATGATGAGGGGAGCCgcg > 2:438827/1‑227 (MQ=255) cGTATGGGGGGGGAAAAAGCCAAAGGT‑GCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTG‑CCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCATTGACGTCAGCCACGGCCTGATGATGAGTGAAGCCGAg < 1:439610/228‑1 (MQ=255) cttagggcggTTAAAAAGCCCAAGGTGGCAGCCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTG‑CCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCATTGACGTCAGCCACGGCCTGATGATGAGTGAAGCCGAg < 1:1725523/220‑1 (MQ=255) aTGGCGGGAGAAAGGGCCAAGGGT‑CCGCCCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTG‑CCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCATTGACGTCAGCCACGGCCTGATGATGAGTGAAGCCGAGCAAt < 1:1101205/229‑1 (MQ=255) ggggggGAAAAAGCAAAAGGT‑GCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTG‑CCTCGATGCa < 1:335093/126‑1 (MQ=255) ttaaagaggCCAAGGGT‑GCGGCCGCCTATGTCACGCTCGACCCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTG‑CCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCATTGACGTCAGCCACGGCCTGATGATGAGTGAAGCCGAGCAATTGAATa < 1:1256466/220‑1 (MQ=255) gTGAAAAAGCCAAGGGG‑GCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTG‑CCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGt < 1:514265/152‑1 (MQ=255) gTGAAAAAGCCAAAGGG‑GCGACCCCCTATTTCCCACCCCAACCCCGTAGCCATCATGGTCGTACGCCACCCTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTG‑CCCCGATGCAAAATCCTAACCCCCAGGTCGCTGGGCGGGGGCCTTTCCCTCTGCAACAGGCTGGCATTGACGTCAGCCCACGCCCGAAGATGAATGAAACCGAGCAATTGaaaa > 2:905191/1‑226 (MQ=255) gTGAAAAAGCAAAAGGT‑GCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTG‑CCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCaa < 1:311635/170‑1 (MQ=255) aGCCAAAGGT‑GCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCCTGGGCGTACGCCACCGGGCTGTGACGCACTCATCCCCGCCGGCGTAGCGCGCGTGGGTG‑CCTCGATGGAAGGTCCTAACCCGCCGGGCCGCGGGCGGGGGCCTTTCCGTCCGCAAAAGGGCGGCATTGACGGCCGCCACGGCCTGGTGGTGGGGGGAGCCGCGGCATTGGATTAAgggctt > 2:187619/1‑225 (MQ=255) gggT‑GGGACCGCCTATGTCCCACTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTG‑CCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCATTGACGTCAGCCACGGCCTGATGATGAGTGAAGCCGAGCAATTGAATAAAGGCTTTCTCAAg < 1:906770/228‑1 (MQ=255) | GAAGAGATCGCGCGCCTGGAGGACTAAGCCGTGCAGGACGAGTATT‑ACATGGCGCGGGCGCT‑AAAGCTGGCGCAACGAGGACGTTTTACCACGCATCCCAACCCGAATGTCGGGTGCG‑TCATTGTCAAAGATGGCGAAATTGTC‑GGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGCGGGTGAAAAAGCCAAAGGT‑GCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTG‑CCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCATTGACGTCAGCCACGGCCTGATGATGAGTGAAGCCGAGCAATTGAATAAAGGCTTTCTCAAG > NC_000913/433425‑433874 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 6 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |