| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,445,981 | 0 | T | G | 30.4% | 202.5 / 10.9 | 93 | G34G (GGT→GGG) | ydbL | DUF1318 family protein |
| Reads supporting (aligned to +/- strand): ref base T (12/52); new base G (28/0); total (41/52) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.74e-14 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
CTGCACCTAAGGAACCGATCACTATCAATATGAACGTTAAAATTGAGCATGAGATCATCATCAAGGCAGACAAAGATGTCGAAGAGCTGCTTGAAACTCGTAGCGATCTTTTCTGAGGTGATGATGAAGAAAACATTACTTCTTTGTGCGTTTCTTGTTGGGCTGGTAAGCAGCAATGTAATGGCATTGACTCTGGATGAAGCCAGAACTCAGGGGCGGGTAGGTG‑AAACATTTTACGGTTATCTGGTTGCGCTGAAAACGGATGCTGAAACAGAGAAATTAGTAGCCGACATTAATGCCG‑AACGTAAAGCGAGTTACCAACAACTGGCAAAGCAAAATAATGTGTCGGTAGATGATATC‑GCGAAACTCG‑CCGGGCAAAAGCTCGTAGCTCGGGC‑CAAACCGGGGGAATATGTACAAGGGATAAACGGTAAATGGGTGCGA > NC_000913/1445757‑1446197 | cTGCATCTAAGGAACCGATCACTAACAATATGAAGGTTAAAATTGAGCATGAGATCATCATCAAGGCAGACAAAGATGTCGAAGAGCTGCTTGAAACTCGTAGCGATCTTTTCTGAGGTGATGATGAAGAAAACATTACTTCTTTGTGCGTTTCTTGTTGGGCTGGGAAGCAGCAATGTAATGGCATTGACTCTGGATGAAGCCAGAACTCAGGGGCGGGTAGGTG‑aaa < 1:1733376/229‑1 (MQ=255)cTGCACCTAAGGAACCGATCACTATCAATATGAACGTTAAAATTGAGCATGAGATCATCATCAAGGCAGACAAAGATGTCGAAGAGCTGCTTGAAACTCGTAGCGATCTTTTCTGAGGTGATGATGAAGAAAACATTACTTCTTTGTGCGTTTCTTGTTGGGCTGGTAAGCAGCAATGTAATGGCATTGACTCTGGATGAAGCCAGAACTCAGGGGCGGGTAGGTG‑aaa < 1:1126672/229‑1 (MQ=255)cTGCACCTAAGGAACCGATCACTATCAATATGAACGTTAAAATTGAGCATGAGATCATCATCAAGGCAGACAAAGATGTCGAAGAGCTGCTTGAAACTCGTAGCGATCTTTTCTGAGGTGATGATGAAGAAAACATTACTTCTTTGTGCGTTTCTTGTTGGGCTGGTAAGCAGCAATGTAATGGCATTGACTCTGGATGAAGCCAGAACTCAGGGGCGGGTAGGTG‑aa < 1:1513561/228‑1 (MQ=255) aCCGATCACTATCAATATGAACGTTAAAATTGAGCATGAGATCATCATCAAGGCAGACAAAGATGTCGAAGAGCTGCTTGAAACTCGTAGCGATCTTTTCTGAGGTGATGATGAAGCAACCATTACTTCTTTGTGCGTTTCTTGTTGGGCTGGTAAGCAGCAATGTAATGGAATTGACTCTGGATGAAGCGAGAACTCAGGGGCGGAGAGGGGCAAACAtttatggtg > 2:1189669/1‑222 (MQ=255) tCACTATCAATATGAACGTTAAAATTGAGCATGAGATCATCATCAAGGCAGACAAAGATGTCGAAGAGCTGCTTGAAACTCGTAGCGATCTTTTCTGAGGTGATGATGAAGAAAACATTACTTCTTTGTGCGTTTCTTGTTGGGCTGGTAAGCAGCAATGTAATGGCATTGACTCTGGATGAAGCCAGAACTCAGGGGCGGGGAGGGG‑AAAAAATTTACGGTTTTCTgg > 1:1364518/1‑229 (MQ=255) tgTTAAAATTGAGCATGAGATCATCATCAAGGCAGACAAAGATGTCGAAGAGCTGCTTGAAACTCGTAGCGATCTTTTCTGAGGTGATGATGAAGAAAACATTACTTCTTTGTGCGTTTCTTGTTGGGCTGGTAAGCAGCAATGTAATGGCATTGACTCTGGATGAAGCCAGAACTCAGGGGCGGGTAGGTG‑AAACATTTTACGGTTATCTGGTTGCGCTGAAAACGGa < 2:883208/228‑1 (MQ=255) ttAAAATTGAGCATGAGATCATCATCAAGGCAGACAAAGATGTCGAAGAGCTGCTTGAAACTCGTAGCGATCTTTTCTGAGGTGATGATGAAGAAAACATTACTTCTTTGTGCGTTTCTTGTTGGGCTGGTAAGCAGCAATGTAATGGCATTGACTCTGGATGAAGCCAGAACTCAGGGGCGGGTAGGGG‑GAACATTTTTCGGTTATCTGGTTGGGCTGAAAACGGATg > 2:425650/1‑229 (MQ=255) ttAAAATTGAGCATGAGATCATCATCAAGGCAGACAAAGATGTCGAAGAGCTGCTTGAAACTCGTAGCGATCTTTTCTGAGGTGATGATGAAGAAAACATTACTTCTTTGTGCGTTTCTTGTTGGGCTGGTAAGCAGCAATGTAATGGCATTGACTCTGGATGAAGCCAGAACTCAGGGGCGGGTAGGGG‑AAACATTTTTCGGGTATATGGTTGCGCGGAAAACGGATg > 2:443535/1‑229 (MQ=255) aaaaTTGAGCATGAGATCATCATCAAGGCAGACAAAGATGTCGAAGAGCTGCTTGAAACTCGTAGCGATCTTTTCTGAGGTGATGATGAAGAAAACATTACTTCTTTGTGCGTTTCTTGTTGGGCTGGTAAGCAGCAATGTAATGGCATTGACTCTGGATGAAGCCAGAACTCAGGGGCGGGTAGGTG‑aa < 1:386865/190‑1 (MQ=255) aaaaTTGAGCATGAGATCATCATCAAGGCAGACAAAGATGTCGAAGAGCTGCTTGAAACTCGTAGCGATCTTTTCTGAGGTGATGATGAAGAAAACATTACTTCTTTGTGCGTTTCTTGTTGGGCTGGTAAGCAGCAATGTAATGGCATTGACTCTGGATGAAGCCAGAACTCAGGGGCGGGTAGGGG‑aa > 2:386169/1‑190 (MQ=255) gAGCATGAGATCATCATCAAGGCAGACAAAGATGTCGAAGAGCTGCTTGAAACTCGTAGCGATCTTTTCTGAGGTGATGATGAAGAAAACATTACTTCTTTGTGCGTTTCTTGTTGGGCTGGTAAGCAGCAATGTAATGGCATTGACTCTGGATGAAGCCAGAACTCAGGGGCGGGTAGGTG‑AAACATTTTACGGTTATCTGGTTGCGCTGAAAACGGATGCTGAAACa < 2:1841253/229‑1 (MQ=255) aGCATGAGATCATCATCAAGGCAGACAAAGATGTCGAAGAGCTGCTTGAAACTCGTAGCGATCTTTTCTGAGGTGATGATGAAGAAAACATTACTTCTTTGTGCGTTTCTTGTTGGGCTGGTAAGCAGCAATGTAATGGCATTGACTCTGGATGAAGCCAGAACTCAGGGGCGGGGAGGGGAAAAAATTTTAGGGTT‑TCTGGGTGCGCTGAAAACGGagtcgtgaaaag > 1:1892828/1‑218 (MQ=255) cATGAGATCATCATCAAGGCAGACAAAGATGTCGAAGAGCTGCTTGAAACTCGTAGCGATCTTTTCTGAGGTGATGATGAAGAAAACATTACTTCTTTGTGCGTTTCTTGTTGGGCTGGTAAGCAGCAATGTAATGGCATTGACTCTGGATGAAGCCAGAACTCAGGGGCGGGTAGGTG‑AAACATTTTACGGGTATCTGGTTGCGCTGAAAACGGATGCTGCAACaga > 1:1895571/1‑228 (MQ=255) catcatcaAGGCAGACAAAGATGTCGAAGAGCTGCTTGAAACTCGTAGCGATCTTTTCTGAGGTGATGATGAAGAAAACATTACTTCTTTGTGCGTTTCTTGTTGGGCTGGTAAGCAGCAATGTAATGGCATTGACTCTGGATGAAGCCAGAACTCAGGGGCGGGTAGGTG‑AAACATTTTACGGTTATCTGGTTGCGCTGAAAACGGATGCTGAAACa < 1:41598/218‑1 (MQ=255) catcatcaAGGCAGACAAAGATGTCGAAGAGCTGCTTGAAACTCGTAGCGATCTTTTCTGAGGTGATGATGAAGAAAACATTACTTCTTTGTGCGTTTCTTGTTGGGCTGGTAAGCAGCAATGTAATGGCATTGACTCTGGATGAAGCCAGAACTCAGGGGCGGGTAGGTG‑AAACATTTTACGGTTATCTGGTTGCGCTGAAAACGGATGCTGAAACa > 1:423127/1‑218 (MQ=255) catcatcaAGGCAGACAAAGATGTCGAAGAGCTGCTTGAAACTCGTAGCGATCTTTTCTGAGGTGATGATGAAGAAAACATTACTTCTTTGTGCGTTTCTTGTTGGGCTGGTAAGCAGCAATGTAATGGCATTGACTCTGGATGAAGCCAGAACTCAGGGGCGGGTAGGTG‑AAACATTTTACGGTTATCTGGTTGCGCTGAAAACGGATGCTGAAACa < 2:422374/218‑1 (MQ=255) catcatcaAGGCAGACAAAGATGTCGAAGAGCTGCTTGAAACTCGTAGCGATCTTTTCTGAGGTGATGATGAAGAAAACATTACTTCTTTGTGCGTTTCTTGTTGGGCTGGTAAGCAGCAATGTAATGGCATTGACTCTGGATGAAGCCAGAACTCAGGGGCGGGTAGGGG‑GAAACTTTTTCGGTTATCTGGTTGCGCTGAAAACGGATGCTGaaaaa > 2:41531/1‑216 (MQ=255) atcaAGTCAGACAAAGAGTTCGAAGAGCTGCTTGAATCTCGTAGCGATCTGTTCTGAGGTGATGATGAAGAAAACATTAATTCGTTGTGCATTTCTTGTTGGGCTGGTAAGCAGCAATGTAATGGCATTGACTCTGGATGAAGCCAGAACTCAGGGGCGGGTAGGTG‑AAACATTTTACGGTTATCTGGTTGCGCTGAAAACGGATGCTGAAACAGAGAAATTAGTAGcc < 2:1167484/229‑1 (MQ=255) atcaAGGCAGACAAAGATGTCGAAGAGCTGCTTGAAACTCGTAGCGATCTTTTCTGAGGTGATGATGAAGAAAACATTACTTCTTTGTGCGTTTCTTGTTGGGCTGGTAAGCAGCAATGTAATGGCATTGACTCTGGATGAAGCCAGAACTCAGGGGCGGGTAGGTG‑AAACATTTTACGGTTATCTGGTTGCGCTGAAAACGGATGCTGAAACAGAGAAATTAGTAGcc < 1:941625/229‑1 (MQ=255) ggCAGACAAAGATGTCGAAGAGCTGCTTGAAACTCGTAGCGATCTTTTCTGAGGTGATGATGAAGAAAACATTACTTCTTTGTGCGTTTCTTGTTGGGCTGGTAAGCAGCAATGTAATGGCATTGACTCTGGATGAAGCCAGAACTCAGGGGCGGGTAGGTG‑aa < 2:614809/164‑1 (MQ=255) ggCAGACAAAGATGTCGAAGAGCTGCTTGAAACTCGTAGCGATCTTTTCTGAGGTGATGATGAAGAAAACATTACTTCTTTGTGCGTTTCTTGTTGGGCTGGTAAGCAGCAATGTAATGGCATTGACTCTGGATGAAGCCAGAACTCAGGGGCGGGTAGGTG‑aa > 1:615887/1‑164 (MQ=255) ggCAGACAAAGATGTCGAAGAGCTGCTTGAAACTCGTAGCGATCTTTTCTGAGGTGATGATGAAGAAAACATTACTTCTTTGTGCGTTTCTTGTTGGGCTGGTAAGCAGCAATGTAATGGCATTGACTCTGGATGAAGCCAGAACTCAGGGGCGGGAAGGTG‑AAACATTTTTCGGTTATCTGGGTGCGCCGAAAACGGATGCTGAAACAGAGAAATTAGTAGCCGACAt > 1:955027/1‑229 (MQ=255) aCAAAGATGTCGAAGAGCTGCTTGAAACTCGTAGCGATCTTTTCTGAGGTGATGATGAAGAAAACATTACTTCTTTGTGCGTTTCTTGTTGGGCTGGTAAGCAGCAATGTAATGGCATTGACTCTGGATGAAGCCAGAACTCAGGGGCGGGTAGGTG‑AAACATTTTACGGTTATCTGGTTGCGCTGAAAACGGATGCTGAAACAGAGAAATTAGTAGCCGACATTAATg > 1:722743/1‑229 (MQ=255) aCAAAGATGTCGAAGAGCTGCTTGAAACTCGTAGCGATCTTTTCTGAGGTGATGATGAAGAAAACATTACTTCTTTGTGCGTTTCTTGTTGGGCTGGTAAGCAGCAATGTAATGGCATTGACTCTGGATGAAGCCAGAACTCAGGGGCGGGTAGGGG‑AAACATTTTTCTGTTTTCTGGTTGCGCTGAAAACGGATGCTGAAACAGAAAAATTTATAGCCGGCATTAAtt > 2:875838/1‑228 (MQ=255) aaaGATGTCGAAGAGCTGCTTGAAACTCGTAGCGATCTTTTCTGAGGTGATGATGAAGAAAACATTACTTCTTTGTGCGTTTCTTGTTGGGCTGGTAAGCAGCAATGTAATGGCATTGACTCTGGATGAAGCCAGAACTCAGGGGCGGGTAGGTG‑AAACATTTTACGGTTATCTGGTTGCGCTGAAAACGGATGCTGAAACAGAGAAATTAGTAGCCGACATTAATGcc < 1:877369/229‑1 (MQ=255) aaaGATGTCGAAGAGCTGCTTGAAACTCGTAGCGATCTTTTCTGAGGTGATGATGAAGAAAACATTACTTCTTTGTGCGTTTCTTGTTGGGCTGGTAAGCAGCAATGTAATGGCATTGACTCTGGATGAAGCCAGAACTCAGGGGCGGGTAGGTG‑AAACATTTTACGGTTATCTGGTTGCGCTGAAAACGGATGCTGAAACAGAGAAATTAGTAGCCGACATTAATGcc < 1:888275/229‑1 (MQ=255) agagCTGCGTGAAAATGGTTGCGATTTTTTCCGAGGTGATGATGAAGAAAACATTTCTTCTTTTGTCGTTTCTTGTTAGGCTGGTAAGCAGCAATGTCATGGCATTGACTCTTGATGAAGCCAGAACTCAGGGGCGGGTAGGTG‑AAACATTTTACGGTTATCTGGTTGCCTTGAAAACGGATGGTGAAACAGAGAAATTAGTAGCCGACATTAATGCCG‑AACGTAAAGc < 2:1645514/229‑1 (MQ=255) ctgctTGAAACTCGTAGCGATCTTTTCTGAGGTGATGATGAAGAAAACATTACTTCTTTGTGCGTTTCTTGTTGGGCTGGTAAGCAGCAATGTAATGGCATTGACTCTGGATGAAGCCAGAACTCAGGGGCGGGTAGGTG‑AAACATTTTACGGTTATCTGGTTGCGCTGAAAACGGATg < 1:1465880/179‑1 (MQ=255) ctgctTGAAACTCGTAGCGATCTTTTCTGAGGTGATGATGAAGAAAACATTACTTCTTTGTGCGTTTCTTGTTGGGCTGGTAAGCAGCAATGTAATGGCATTGACTCTGGATGAAGCCAGAACTCAGGGGCGGGTAGGGG‑AAACATTTTTCGGTTTTCTGGTTGCGCTGAAAACGGATg > 2:1463364/1‑179 (MQ=255) ctgctTGAAACTCGTAGCGATCTTTTCTGAGGTGATGATGAAGAAAACATTACTTCTTTGTGCGTTTCTTGTTGGGCTGGTAAGCAGCAATGTAATGGCATTGACTCTGGATGAAGCCAGAACTCAGGGGCGGGGAGGGG‑AAACATTTTACGGGTATCTGGTTGCGCCGAAAACGGATGCGGAAACAGAGAAATTAGTAGCGGAAATTAAAGCCG‑AACGGAAAGCGAGt > 2:1561149/1‑229 (MQ=255) cgtctTGAAACTCGTAGCGATCTTTTCGGAGGTGATGATGAAGAAAACATTACTTCTTGGTGCGTTTCTTGGTGGGCTGGTAAGCAGCAATGTAATGGCATTGACTCTGGAAGAAGCCAGAACTCAGGGGCGGGTAGGTG‑AAACATTTTACGGTTATCTGGTTGCGCTGAAAACGGATGCTGAAACAGAGAAATTAGTAGCCGACATTAATGCCG‑AACGTAAAGCGAg < 2:136299/225‑1 (MQ=255) cTCGTAGCGATCTTTTCTGAGGTGATGATGAAGAAAACATTACTTCTTTGTGCGTTTCTTGTTGGGCTGGTAAGCAGCAATGTAATGGCATTGACTCTGGATGAAGCCAGAACTCAGGGGCGGGTAGGTG‑AGACATTTTACGGTTATCTGGTTGCGCTGAAAACGGATGCTGTAACAGAGAAATTAGGAGCCGACAATAAATCCC‑AAAGCAAAGGAAGTTTCAaacaac > 2:713922/1‑229 (MQ=255) gTAGCGATCTTTTCTGAGGTGATGATGAAGAAAACATTACTTCTTTGTGCGTTTCTTGTTGGGCTGGTAAGCAGCAATGTAATGGCATTGACTCTGGATGAAGCCAGAACTCAGGGGCGGGTAGGTG‑AAACATTTTACGGTTATCTGGTTGCGCTGAAAACGGATGCTGAAACAGAGAAATTAGTAGCCGACATTAATGCCG‑AACGTAAAGCGAGTTACCAACAACTgg < 1:599635/229‑1 (MQ=255) tAGCGATCTTTTCTGAGGTGATGATGAAGAAAACATTACTTCTTTGTGCGTTTCTTGTTGGGCTGGTAAGCAGCAATGTAATGGCATTGACTCTGGATGAAGCCAGAACTCAGGGGCGGGTAGGTG‑AAACATTTTACGGTTATCTGGTTGCGCTGAAAACGGATGCTGAAACAGAGAAATTAGTAGCCGACATTAATGCCG‑AACGTAAAGCGAGTTACCAACAACTgg < 1:1563831/228‑1 (MQ=255) tAGCGATCTTTTCTGAGGTGATGATGAAGAAAACATTACTTCTTTGTGCGTTTCTTGTTGGGCTGGTAAGCAGCAATGTAATGGCATTGACTCTGGATGAAGCCAGAACTCAGGGGCGGGTAGGTG‑AAACATTTTACGGTTATCTGGTTGCGCTGAAAACGGATGCTGAAACAGAGAAATTAGTAGCCGACATTAATGCCG‑AACGTAAAGCGAGTTACCAACAACTgg < 2:673332/228‑1 (MQ=255) aGCGATCTTTTCTGAGGTGATGATGAAGAAAACAGTACTTCTTTGTGCGTTTCTTGTTGGGCTGGTAAGCAGCAATGTAATGGCATTGACTCTGGATGAAGCCAGAACTCAGGGGCGGGTAGGTG‑AAACATTTTACGGTTATCTGGTTGCGCTGAAAACGGATGCTGAAACAGAGAAATTAGTAGCCGACATTAATGCCG‑AACGTAAAGCGAGTTACCAACAACTGgca < 2:1161729/229‑1 (MQ=255) cGATCTTTGCTGAGGTGATGATGAAGAAAACATTACTTCTTTGTGCGTTTCTTGTTGGGCTGGTAAGCAGCAATGTAATGGCATTGACTCTGGATGAAGCCAGAACTCAGGGGCGGGTAGGTG‑AAACATTTTACGGTTATCTGGTTGCGCTGAAAACGGATGCTGAAACAGAGAAATTAGTAGCCGACATTAATGCCG‑AACGTAAAGCGAGTTACCAACAACTGgcaaa < 1:444325/229‑1 (MQ=255) cTTTTCTGAGGTGATGATGAAGAAAACATTACTTCTTTGTGCGTTTCTTGTTGGGCTGGTAAGCAGCAATGTAATGGCATTGACTCTGGATGAAGCCAGAACTCAGGGGCGGGTAGGAG‑AAAAATTTTACGGGTATCTGGTTGCGCTGAAAACGGGTGCTGAAACAGAGAAATTAGTAGCCGACATTAATGCCG‑AACGCAAAACGCGTTTACAAAAACTTgcaaagcaa > 2:1114453/1‑229 (MQ=255) gTGATGATGAAGATACCATTACTTCTTTGTGCGTTTCTTGTTGGGCTGGTAAGCAGCAATGTAATGGCATTGACTCTGGATGAAGCCAGAACTCAGGGGCGGGTAGGTG‑AAACATTTTACGGTTATCTGGTTGCGCTGAAAACGGATGCTGAAACAGAGAAATTAGTAGCCGACATTAATGCCG‑AACGTAAAGCGAGTTACCAACAACTGGCAAAGCAAAATAATgtgt < 2:89308/229‑1 (MQ=255) gTGATGATGAAGAAAACATTACTTCTTTGTGCGTTTCTTGTTGGGCTGGTAAGCAGCAATGTAATGGCATTGACTCTGGATGAAGCCAGAACTCAGGGGCGGGTAGGTG‑AAACATTTTACGGTTATCTGGTTGCGCTGAAAACGGATGCTGAAACAGAGAAATTAGTAGCCGACATTAATGCCG‑AACGTAAAGCGAGTTACCAACAACTGGCAAAGCAAAATAATgtgt < 2:1074190/229‑1 (MQ=255) gTGATGATGAAGAAAACATTACTTCTTTGTGCGTTTCTTGTTGGGCTGGTAAGCAGCAATGTAATGGCATTGACTCTGGATGAAGCCAGAACTCAGGGGCGGGTAGGGG‑AAACATTTTATGGTTATTTTGGTGCGCTGAAAACGGATGGTGAAAAAGAGAAATTAGGAGCCGCAATTAATGCCG‑AACGTAAAGCGAGGTACCAAAAACTGGCAAAGCAAaaaaattagt > 2:1924541/1‑225 (MQ=255) gatgatgaAGAAAACATTACTTCTTTGTGCGTTTCTTGTTGGGCTGGTAAGCAGCAATGTAATGGCATTGACTCTGGATGAAGCCAGAACTCAGGGGCGGGTAGGTG‑AAACATTTTACGGTTATCTGGTTGCGCTGAAAACGGATGCTGAAACAGAGAAATTAGTAGCCGACATTAATGCCG‑AACGTAAAGCGAGTTACCAACAACTGGCAAAGCAAAATAATGTGTCg < 1:1429230/229‑1 (MQ=255) atgatgaAGAAAACATTACTTCTTTGTGCGTTTCTTGTTGGGCTGGTAAGCAGCAATGTAATGGCATTGACTCTGGATGAAGCCAGAACTCAGGGGCGGGTAGGGG‑AAACATTTTACGGTTATCTGGTTGCGCTGAAAACGGATGCTGAAACAGAGAAATTAGTAGCCGACATTAATTCCG‑AACGTAAAGAGAGTTTACCACAACTGGCAAAGCAAAAACATGAGTCg > 1:1007442/1‑228 (MQ=255) atgatgaAGAAAACATTACTTCTTTGTGCGTTTCTTGTTGGGCTGGTAAGCAGCAATGTAATGGCATTGACTCTGGATGAAGCCAGAACTCAGGGGCGGGGAGGGG‑AAACATTTTACGGGTATCTGGGTGCGCGGAAAAAGGAAGCTGAAAAAGGGAAATTAGTAGCCGACATTAATGCCG‑AAAGTAAAAGGAGGTACCAACAAACGGCAAAACAAAAAAATGTGTCg > 1:1411060/1‑228 (MQ=255) taaaaCATTTCTTCTTATAGCATTTCTGGTTGGGCTGGTAAGCAGAAAGGTAATGGCATTGACTCTGGATGAAGCCATAACTCAGGGGCGGGTAGGTG‑AAACATTTTACGGTTATCTGGTTGCGCTGAAAACGGATGCTGAAACAGAGAAATTAGTAGCCGACATTAATGCCG‑AACGTAAAGCGAGTTACCAACAACTGGCAAAGCAAAATAATGTGTCGGTagaaga < 2:1157349/227‑1 (MQ=255) tACTTCTTTGTGCGTTTCTTGTTGGGCTGGTAAGCAGCAATGTAATGGCATTGACTCTGGATGAAGCCAGAACTCAGGGGCGGGTAGGTG‑AAACATTTTACGGTTATCTGGTTGCGCTGAAAACGGATGCTGAAACAGAGAAATTAGTAGCCGACATTAATGCCG‑AACGTAAAGc < 1:1253471/175‑1 (MQ=255) tACTTCTTTGTGCGTTTCTTGTTGGGCTGGTAAGCAGCAATGTAATGGCATTGACTCTGGATGAAGCCAGAACTCAGGGGCGGGTAGGGG‑AAACATTTTACGGTTATCTGGTTGCGCTGAAAACGGGGGCTGGAACAAAGAAATTAGTAACCGCCATTAATTCCG‑AACGGAAAGc > 2:1251294/1‑175 (MQ=255) cttcttTGTGCGTTTCTTGTTGGGCTGGTAAGCAGCAATGTAATGGCATTGACTCTGGATGAAGCCAGAACTCAGGGGCGGGTAGGTG‑AAACATTTTACGGTTATCTGGTTGCGCTGAAAACGGATGCTGAAACAGAGAAATTAGTAGCCGACATTAATGCCG‑AACGTAAAGCGAGTTACCAACAACTGgca < 1:1114732/192‑1 (MQ=255) cttcttTGTGCGTTTCTTGTTGGGCTGGTAAGCAGCAATGTAATGGCATTGACTCTGGATGAAGCCAGAACTCAGGGGCGGGGAGGGG‑AAACATTTTAAGGTTATCTGGTTGCGCTGGAAACGGAGGCTGAAAAAGAGAAATTAATAACCGAAATTAATGCCC‑AAAGTAAAGCGAGTTTCcaacaaactgcg > 2:1112794/1‑186 (MQ=255) cttTGTGCGTTTCTTGTTGGGCTGGTAAGCAGCAATGTAATGGCATTGACTCTGGATGAAGCCAGAACTCAGGGGCGGGTAGGTG‑AAACATTTTACGGTTATCTGGTTGCGCTGAAAACGGATGCTGAAACAGAGAAATTAGTAGCCGACATTAATGCCG‑AACGTAAAGCGAGTTACCAACAACTGGCAAAGCAAAATAATGTGTCGGTAGATGATATC‑GCGAAACTCg < 1:426407/229‑1 (MQ=255) tgtgCGTTTCTTGTTGGGCTGGTAAGCAGCAATGTAATGGCATTGACTCTGGATGAAGCCAGAACTCAGGGGCGGGTAGGTG‑AAACATTTTa < 1:1236254/92‑1 (MQ=255) tgtgCGTTTCTTGTTGGGCTGGTAAGCAGCAATGTAATGGCATTGACTCTGGATGAAGCCAGAACTCAGGGGCGGGGAGGGG‑AAAAATTTTa > 2:1234105/1‑92 (MQ=255) tgCGTTTCTTGTTGGGCTGGTAAGCAGCAATGTAATGGCATTGACTCTGGATGAAGCCAGAACTCAGGGGCGGGTAGGGG‑AAACCTTTTACGGTTATCTGGTTGCGCTGAAAACGGGTGCTGAAACAGAGAAATTAGTAGCCGACATTAATGACG‑AACGTAAAGCGAGTTACCAACAACCGGCAAAACAAAAAAAATGGTCGGTGAAGGATATA‑GCGCAACACG‑CCggg > 2:1673132/1‑229 (MQ=255) gTTTCTTGTTGGGCTGGTAAGCAGCAATGTAATGGCATTGACTCTGGATGAAGCCAGAACTCAGGGGCGGGTAGGTG‑AAACATTTTACGGTTATCTGGTTGCGCTGAAAACGGATGCTGAAACAGAGAAATTAGTAGCCGACATTAATGCCG‑AACGTAAAGCGAGTTACCAACAACTGGCAAAGCAAAATAATGTGTCGGTAGATGATATC‑GCGAAACTCG‑CCGGGCaa < 1:1116395/229‑1 (MQ=255) tttCTTGTTGGGCTGGTAAGCAGCAATGTAATGGCATTGACTCTGGATGAAGCCAGAACTCAGGGGCGGGTAGGGG‑AAACATTTTACGGTTATCTGGTTGCGCTGAAAACGGATGCTGAAACAGAGAAATTATTAGCCGACATTAATGCCG‑AACGTAAAGCGAGTTACCAACAACTGGCCAAGCAAAATAATGGGTCGGGAAGAGATATC‑GCCAAACTCC‑CCCGGGaa > 2:1131350/1‑228 (MQ=255) gCTGGTAAGCAGCAATGTAATGGCATTGACTCTGGATGAAGCCAGAACTCAGGGGCGGGTAGGTG‑AAACATTTTACGGTTATCTGGTTGCGCTGAAAACGGATGCTGAAACAGAGAAATTAGTAGCCGACATTAATGCCG‑AACGTAAAGCGAGTTACCAACAACTGGCAAAGCAAAATAATGTGTCGGTAGATGATATC‑GCGAAACTCG‑CCGGGCAAAAGCTCGTAGCt < 1:172839/229‑1 (MQ=255) gtGGTAAGCAGCAATGTAATGGCATTGACTCTGGATGAAGCCAGAACTCAGGGGCGGGTAGGTG‑AAACATTTTACGGTTATCTGGTTGCGCTGAAAACGGATGCTGAAACAGAGAAATTAGTAGCCGACATTAATGCCG‑AACGTAAAGCGAGTTACCAACAACTgg < 1:246879/165‑1 (MQ=255) cTGGTAAGCAGCAATGTAATGGCATTGACTCTGGATGAAGCCAGAACTCAGGGGCGGGGAGGGG‑AAACATTTTACGGGTTTCTGGTTGCGCTGAAAACGGATGCTGAAAAAGAGAAATTAGTAGGCGACATTAATGCCG‑AACGGAAAGCGAGGTAACAAAAACTgg > 2:246445/1‑166 (MQ=255) gcaATGTAATGGCATTGACTCTGGATGAAGCCAGAACTCAGGGGCGGGGAGGGG‑GAACATTTTACGGTTATCTGGTTGCGGTGAAAACGGGTGGTGAAACAGAGAAATTAGTAGCCGACATTAATGCCG‑AACGAGAAGCGAGTTTACAACAACTGGCAAAGCAAAATAATGTGTCGGGAGAAGAGATA‑GCGAAACAAG‑GCGGGCAAAAAGTCCAAGCTAGGGC‑CAAAca > 2:90568/1‑228 (MQ=255) caATGTAATGGCATTGACTCTGGATGAAGCAAGAACTCAGGGGCGGGTAGGTG‑AAACATTTTACGGTTATCTGGTTGCGCTGAAAACGGATGCTGAAACAGAGAAATTAGTAGCCGACATTAATGCCG‑AACGTAAAGCGAGTTACCAACAACTGGCAAAGCAAAATAATGTGTCGGTAGATGATATC‑GCGAAACTCG‑CCGGGCAAAAGCTCGTAGCTCGGGC‑CAAAcc < 1:628482/228‑1 (MQ=255) gTAATGGCATTGACTCTGGATGAAGCCAGAACTCAGGGGCGGGTAGGTG‑AAACATTTTACGGTTATCTGGTTGCGCTGAAAACGGATGCTGAAACAGAGAAATTAGTAGCCGACATTAATGCCG‑AACGTAAAGCGAGTTACCAACAACTGGCAAAGCAAAATAATGTGTCGGTAGATGATATC‑GCGAAACTCG‑CCGGGCAAAAGCTCGTAGCTCGGGC‑CAAACCgggg < 1:1133322/228‑1 (MQ=255) gaaTGGCATTGACTCTGGATGAAGCCAGAACTCAGGGGCGGGTAGGTG‑AAACATTTTACGGTTATCTGGTTGCGCTGAAAACGGATGCTGAAACAGAGAAATTAGTAGCCGACATTAATGCCG‑AACGTAAAGCGAGTTACCAACAACTGGCAAAGCAAAATAATGTGTCGGTAGATGATATC‑GCGAAACTCG‑CCGGGCAAAAGCTCGTAGCTCGGGC‑CAAACCGGGGGa < 1:649662/228‑1 (MQ=255) ggCATTGACGTGTGATGAAGCCAGAACTCAGGGGCGGGTAGGTG‑AAACATTTTACGGTTATCTGGTTGCGCTGAAAACGGATGCTGAAACAGAGAAATTAGTAGCCGACATTAATGCCG‑AACGTAAAGCGAGTTACCAACAACTGGCAAAGCAAAATGATGTGTCGGTAGATGATATC‑GCGAAACTCC‑CCGGGCAAAAGCTCGTAGCTCGGGC‑CAAACCGGGGGAat < 2:1739379/227‑1 (MQ=255) gCATTGACTCTGGATGAAGCCAGAACTCCGGGGCGGGTGGGTG‑AAACATTTTTCGGGTGTCTTGTTTCGCTGAAAAAGGATGCTTGAACAGAGAAATTAGTAGCCGACATTAATGGCG‑CACGGAAATGGAGGTTCCAAAAACCGGCACAGCCAAATAATGTGTCCGTATATG‑GATCGGCGAAACCCG‑CCGGGCCAAAGCTCGTAGATCCGGG‑CAAATCGGGGGAAAATg > 2:1522670/1‑229 (MQ=255) ttGACTCTGGATGAAGCCAGAACTCAGGGGCGGGTAGGTG‑AAACATTTTACGGTTATCTGGTTGCGCTGAAAACg > 1:1832170/1‑75 (MQ=255) ttGACTCTGGATGAAGCCAGAACTCAGGGGCGGGTAGGTG‑AAACATTTTACGGTTATCTGGTTGCGCTGAAAACg < 2:1829056/75‑1 (MQ=255) ttGACTCTGGATGAAGCCAGAACTCAGGGGCGGGTAGGTG‑AAACATTTTACGGTTATCTGGTTGCGCTGAAAACGGATGCTGAAACAGAGAAATtag > 1:1325669/1‑97 (MQ=255) ttGACTCTGGATGAAGCCAGAACTCAGGGGCGGGTAGGTG‑AAACATTTTACGGTTATCTGGTTGCGCTGAAAACGGATGCTGAAACAGAGAAATtag < 2:1323383/97‑1 (MQ=255) ttGACTCTGGATGAAGCCAGAACTCAGGGGCGGGTAGGTG‑AAACATTTTACGGTTATCTGGTTGCGCTGAAAACGGATGCTGAAACAGAGAAATTAGTAGCCGACATTAATGcc < 1:515228/114‑1 (MQ=255) ttGACTCTGGATGAAGCCAGAACTCAGGGGCGGGTAGGGG‑AAACATTTTACGGGTATCTGGTTGCGCTGAAAACGGAAGCTGGAAAAGAGAAATTAGTAGCCGACCTTAATGGCG‑AACGGAAAGCGAGGTAACCAAAAATGGCAAAGCAAAAAAAAGAGTCGGTAGATGAGATC‑GCGAAACACG‑CCAGGCAAAAACACGTAAGTCGGGC‑ACAACACGGGGAATAAGTa > 2:202908/1‑228 (MQ=255) ttGACTCTGGATGAAGCCAGAACTCAGGGGCGGGGAGGGG‑AAAAATTTTTCGGGTATTTGGGTGCGCTGAAAACGGATGCTGAAAAAGAGGAATTTGTAGCCGACATTTATGcc > 2:514318/1‑114 (MQ=255) tGACTCTGGATGAAGCCAGAACGCAGGGGCGGGTAGGTG‑AAACATTTTACGGTTATCTGGTTGCGCTGAAAACGGATGCTGAAACAGAGAAATTAGTAGCCGACATTAATGCCG‑AACGTAAAGCGAGTTACCAACAACTGGCAAAGCAAAATAATGTGTCGGTAGATGATATC‑GCGAAACTCG‑CCGGGCAAAAGCTCGTAGCTCGGGC‑CAAACCGGGGGAATATGTACa < 1:1835329/229‑1 (MQ=255) gACTCTGGATGAAGCCAGAACTCAGGGGCGGGTAGGTG‑AAACATTTTACgg < 1:350133/51‑1 (MQ=255) gACTCTGGATGAAGCCAGAACTCAGGGGCGGGTAGGTG‑AAACATTTTACgg < 1:404808/51‑1 (MQ=255) gACTCTGGATGAAGCCAGAACTCAGGGGCGGGTAGGGG‑GAACATTTTTCgg > 2:404081/1‑51 (MQ=255) gACTCTGGATGAAGCCAGAACTCAGGGGCGGGTAGGGG‑AAACATTTTTAGGGTTTTTGGTTGCGCTGAAAACCGGTGCTGAAACCGAGAAATTAGTAACCGCAATTAATGCCGCACCGTAAA‑CGAGTTTCCCACAAACTGCAAAGCAAAAAAATGTGTCGGAAAAAGCAGAC‑GCCGAACACGCCCGGCCAAAAGC‑CGTAGTGCGGGG‑CAAACCggggggaaaataaaaa > 2:733344/1‑218 (MQ=255) gACTCTGGATGAAGCCAGAACTCAGGGGCGGGTAGGGG‑AAAAATTTTTCgg > 2:349503/1‑51 (MQ=255) tGGATGAAGCCAGAACTCAGGGGCGGGTAGGTG‑AAACATTTTACGGTTATCTGGTTGCGCTGAAAACGGATGCTGAAACAGAGAAATTAGTAGCCGACATTAATGCCG‑AACGTAAAGCGAGTTACCAACAACTGGCAAAGCAAAATAATGTGTCGGTAGATGATATC‑GCGAAACTCG‑CCGGGCAAAAGCTCGTAGCTCGGGC‑CAAACCggg < 1:1704566/211‑1 (MQ=255) tGGATGAAGCCAGAACTCAGGGGCGGGGAGGGG‑GAAAATTTTTCGGTTATCTGGTTGGGCTGAAAACGGATGCTGAAAAAGAGAAATTATTAGCCGACATTAATGCCG‑GAAGTAAAGCGGGTTAACAACAACTGGCAAAGCAAAATAATGTGTCGGTAGATGAAATC‑GCGAAACTCG‑CCCGGCAAAAACTCGTAGCTCGGGC‑CAAACCggg > 2:1701656/1‑211 (MQ=255) ggATGAAGCCAGAACTCAGGGGCGGGTAGGTG‑GAAAATTTTTCGGTTATCTGGTTGCGCTGAAAACGGGAGGTGAAAAAGAGAAATTAGTAGCCGACATTTATTCCG‑AAAGTAAAGCGAGTTACCAAAAACTGGCAAAGAACAATAATCGTTCGGGAGATGATATC‑GCGAAACTCT‑CCGGGCAAAAACTCGTAGCCCGGGG‑CAAACCCGGGGGAAAAGTACCAggggat > 2:184227/1‑226 (MQ=255) aTGAAGCCAGACCTCAGGGGCGGGTAGGTG‑AAACATTTTACGGTTATCTGGTTGCGCTGAAAACGGATGCTGAAACAGAGAAATTAGTAGCCGACATTAATGCCG‑AACGTAAAGCGAGTTACCAACAACTGGCAAAGCAAAATAATGTGTCGGTAGATGATATC‑GCGAAACTCG‑CCGGGCAAAAGCTCGTAGCTCGGGC‑CAAACCGGGGGAATATGTACAAGGGATaaa < 1:1927843/229‑1 (MQ=255) aTGAAGCCAGAACTCAGGGGCGGGTAGGTG‑AAACATTTTACGGTTATCTGGTTGCGCTGAAAACGGATGCTGAAACAGAGAAATTAGTAGCCGACATTAATGCCG‑AACGTAAAGCGAGTTACCAACAACTGGCAAAGCAAAATAATGTGTCGGTAGATGATATC‑GCGAAACTCG‑CCGGGCAAAAGCTCGTAGCTCGGGC‑CAAACCGGGGGAATATGTACAAGGGATaaa < 2:1362166/229‑1 (MQ=255) aTGAAGCCAGAACTCAGGGGCGGGTAGGTG‑AAACATTTTACGGTTATCTGGTTGCGCTGAAAACGGATGCTGAAACAGAGAAATTAGTAGACGACATTAATGCCG‑AACGTAAAGCGAGTTACCAACAACTGGCAAAGCAAAATAATGTGTCGGTAGATGATATC‑GCGAAACTCG‑CCGGGCAAAAGCTCGTAGCTCGGGC‑CAAACCGGGGGAATATGTACAAGGGATaaa < 1:1509311/229‑1 (MQ=255) aaGCCAGAACTCAGGGGCGGGTAGGTG‑AAACATTTTACGGTTATCTGGTTGCGCTGAAAACGGATGCTGAAACAGAGAAATTAGTAGCCGACATTAATGCCG‑AACGTAAAGCGAGTTACCAACAACTGGCAAAGCAAAATAATGTGTCGGTAGATGATATC‑GCGAAACTCG‑CCGGGCAAAAGCTCGTAGCTCGGGC‑CAAACCGGGGGAATATGTACAAGGGATaaa < 1:1865300/226‑1 (MQ=255) aaGCCAGAACTCAGGGGCGGGGAGGGG‑AAACATTTTTCGGTTATCTGGGTGCGCTTGAAAAGGGTGCTGAAAAAGAGAAATTAGTAGACGACATTAATGACG‑AACGTAAAGCGAGTTACCAACAAATGGCAAAGCAAAAAAATGTGTCGGGAGATGAGATC‑GCGCAAAACG‑CCGGGCAAAAGATCGTAACGCGGGCGCAAACAGGGGG‑ATAAGTACAAagggacacacg > 2:1862119/1‑221 (MQ=255) aGCCAGAACTCAGGGGCGGGTAGGTG‑AAACATTTTACGGTTATCTGGTTGCGCTGAAAACGGATGCTGAAACAGAGAAATTAGTAGcc > 1:1498658/1‑88 (MQ=255) aGCCAGAACTCAGGGGCGGGTAGGTG‑AAACATTTTACGGTTATCTGGTTGCGCTGAAAACGGATGCTGAAACAGAGAAATTAGTAGcc < 2:1496074/88‑1 (MQ=255) gAACTCAGGGGCGGGTAGGTG‑AAACATTTTACGGTTATCTGGTTGCGCTGAAAACGGATGCTGAAACAGAGAAATTAGTAGCCGACATTAATGCCG‑AACGTAAAGCGAGTTACCAACAACTGGCAAAGCAAaataa < 1:1696395/136‑1 (MQ=255) aCTCAGGGGCGGGTAGGTG‑AAACATTTTACGGTTATCTGGTTGCGCTGAAAACGGATGCTGAAACAGAGAAATTAGGAGCCGACATTAATGCCG‑AACGTAAAGCGAGTTACCAACAACTGGCAAAGCAAAATAATGTGTCGGTAGATGATATC‑GCGAAACTCG‑CCGGGCAAAAGCTCGTAGCTCGGGC‑CAAACCGGGGGAATATGTACAAGGGATAAACGGTAAATgg < 1:1703171/228‑1 (MQ=255) aGGGGCGGGTAGGTG‑AAACATTTTACGGTTATCTGGTTGCGCTGAAAACGGATGCTGAAACAGAGAAATTAGTAGCCGACATTAATGCCG‑AACGTAAAGCGAGTTACCAACAACTGGCAAAGCAAAATAAGGTGTCGGTAGATGATATC‑GCGAAACTCG‑CCGGGCaaa < 1:604252/168‑1 (MQ=255) ggggCGGGTAGGGG‑AAACATTTTACGGTTATCTGGGTGCGCTGAAAACGGGTGCTGAAACCGAGAAATTAGTAGCCGACATTAATGCCG‑AACGTAAAGCGAGTTACCAACAACTTGCAAAGCAAAATAATGTGTCGGGAGATGATATC‑GCGAAAATCC‑CCCGGCAAAAACCCGTAGCCCGGGG‑CAAACCGGGGGGATAATGACAAAGGGTAAAAGGGAAAAGGGGGCGa > 2:941057/1‑229 (MQ=255) gTG‑AAACATTTTACGGTTATCTGGTTGCGCTGAAAACGGATGCTGAAACAGAGAAATTAGTAGCCGACATTAATGCCG‑AACGTAAAGCGAGTTACCAACAACTGGCAAAGCAAAATAATGTGTCGGTAGATGATATC‑GCGAAACTCG‑CCGGGCAAAAGCTCGTAGCTCGGGC‑CAAACCggg > 2:95155/1‑181 (MQ=255) gTG‑AAACATTTTACGGTTATCTGGTTGCGCTGAAAACGGATGCTGAAACAGAGAAATTAGTAGCCGACATTAATGCCG‑AACGTAAAGCGAGTTACCAACAACTGGCAAAGCAAAATAATGTGTCGGTAGATGATATC‑GCGAAACTCG‑CCGGGCAAAAGCTCGTAGCTCGGGC‑CAAACCggg < 1:95314/181‑1 (MQ=255) | CTGCACCTAAGGAACCGATCACTATCAATATGAACGTTAAAATTGAGCATGAGATCATCATCAAGGCAGACAAAGATGTCGAAGAGCTGCTTGAAACTCGTAGCGATCTTTTCTGAGGTGATGATGAAGAAAACATTACTTCTTTGTGCGTTTCTTGTTGGGCTGGTAAGCAGCAATGTAATGGCATTGACTCTGGATGAAGCCAGAACTCAGGGGCGGGTAGGTG‑AAACATTTTACGGTTATCTGGTTGCGCTGAAAACGGATGCTGAAACAGAGAAATTAGTAGCCGACATTAATGCCG‑AACGTAAAGCGAGTTACCAACAACTGGCAAAGCAAAATAATGTGTCGGTAGATGATATC‑GCGAAACTCG‑CCGGGCAAAAGCTCGTAGCTCGGGC‑CAAACCGGGGGAATATGTACAAGGGATAAACGGTAAATGGGTGCGA > NC_000913/1445757‑1446197 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |