BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	484,337	(C)_6→7	coding (67/3150 nt)	acrB ←	multidrug efflux system protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	484,331	1	.	C	100.0%	318.6 / NA	94	L25V (CTG→GTG)	acrB	multidrug efflux system protein
Reads supporting (aligned to +/- strand): ref base . (0/0); new base C (49/45); total (49/45)

Only 100 of 104 total aligned reads displayed.

GTTTTCGCATCAGCGCCGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCAG‑CCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGAAATTAGGCATGTCTTAACGGCTCCTGTTTAAG  >  NC_000913/484237‑484425

gTTTTCGCATCAGCGCCGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCAG‑ccccc                                                                                           >  2:26468/1‑100 (MQ=255)

gTTTTCGCATCAGCGCCGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCAG‑ccccc                                                                                           >  1:1854252/1‑100 (MQ=255)

gTTTTCGCATCAGCGCCGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCAG‑ccccc                                                                                           <  1:1077841/100‑1 (MQ=255)

  tttCGCATCAGCGCCGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCAG‑ccccccc                                                                                         <  1:1002093/100‑2 (MQ=255)

  tttCGCATCAGCGCCGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCAG‑ccccccc                                                                                         <  2:1812894/100‑2 (MQ=255)

  tttCGCATCAGCGCCGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCAG‑ccccccc                                                                                         <  1:1207606/100‑2 (MQ=255)

  tttCGCATCAGCGCCGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCAG‑ccccccc                                                                                         <  1:2195372/100‑2 (MQ=255)

   ttCGCATCAGCGCCGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCAG‑ccccccct                                                                                        >  1:2147290/1‑98 (MQ=255)

   ttCGCATCAGCGCCGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCAG‑ccccccct                                                                                        >  2:1059730/1‑98 (MQ=255)

     cGCATCAGCGCCGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCAG‑ccccccctgc                                                                                      >  1:1919398/1‑96 (MQ=255)

       cATCAGCGCCGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCAGCCCCCCCTGCCa                                                                                     >  2:684716/1‑100 (MQ=255)

       cATCAGCGCCGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCAGCCCCCCCTGCCa                                                                                     <  1:1972457/100‑1 (MQ=255)

       cATCAGCGCCGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCAGCCCCCCCTGCCa                                                                                     <  1:1707109/100‑1 (MQ=255)

        aTCAGCGCCGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCAGCCCCCCCTGCCaa                                                                                    >  2:1232466/1‑100 (MQ=255)

          cAGCGCCGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCAGCCCCCCCTGCCAACa                                                                                  >  2:462826/1‑100 (MQ=255)

          cAGCGCCGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCAGCCCCCCCTGCCAACa                                                                                  >  2:462157/1‑100 (MQ=255)

          cAGCGCCGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCAGCCCCCCCTGCCAACa                                                                                  <  1:1541450/100‑1 (MQ=255)

           aGCGCCGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCAGCCCCCCCTGCCAACat                                                                                 >  2:1652627/1‑100 (MQ=255)

           aGCGCCGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCAGCCCCCCCTGCCAACat                                                                                 <  1:2068918/100‑1 (MQ=255)

           aGCGCCGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCAGCCCCCCCTGCCAACat                                                                                 <  2:2527668/100‑1 (MQ=255)

             cgcCGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCAGCCCCCCCTGCCAACatga                                                                               >  2:1989431/1‑100 (MQ=255)

              gcCGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCAGCCCCCCCTGCCAACatgat                                                                              >  2:1475037/1‑100 (MQ=255)

                cGGGGTAGGAGACGAAGATCGTTACTGCCGGCGGTGCAATCGTAAGATATTGCGCCACCGGCAGTTTGAGGATCGCCAGCCCCCCCTGCCAACAtgatga                                                                            >  1:2319445/1‑100 (MQ=255)

                      aggaggCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCAGCCCCCCCTGCCAACATGATGATAATgg                                                                      >  2:551250/1‑100 (MQ=255)

                       ggaggCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCAGCCCCCCCTGCCAACATGATGATAATggn                                                                     <  1:997650/100‑2 (MQ=255)

                       ggaggCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCAGCCCCCCCTGCCAACATGATGATAATGGc                                                                     >  1:903495/1‑100 (MQ=255)

                       ggaggCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCAGCCCCCCCTGCCAACATGATGATAATGGc                                                                     >  1:1361204/1‑100 (MQ=255)

                       ggaggCGGAGATCGGTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGACCGCCAGCCCCCCCAGCCAACATGATGATAATGGc                                                                     <  2:1552381/100‑1 (MQ=255)

                        gaggCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCAGCCCCCCCTGCCAACATGATGATAATGGcn                                                                    <  1:877178/100‑2 (MQ=255)

                        gaggCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCAGCCCCCCCTGCCAACATGATGATAATGGCg                                                                    <  1:477593/100‑1 (MQ=255)

                        gaggCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCAGCCCCCCCTGCCAACATGATGATAATGGCg                                                                    >  1:1066365/1‑100 (MQ=255)

                        gaggCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCAGCCCCCCCTGCCAACATGATGATAATGGCg                                                                    <  2:768290/100‑1 (MQ=255)

                         atgtggAGATCGTTACGGCCGGCGGTGAAATCGTAGGGTCTGGCGCCACCGACAGCTTGAAGATCGCCAGCCCCCCCTGCAAACAAGATGAGAATGGCGa                                                                   <  2:815308/96‑1 (MQ=255)

                         aggCGGAGAGCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCAGCCCCCCCTGCAAACATGATGATAATGGCGa                                                                   <  2:2544465/100‑1 (MQ=255)

                          ggCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCAGCCCCCCCTGCCAACATGATGATAATGGCGAt                                                                  >  2:1799867/1‑100 (MQ=255)

                          ggCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCAGCCCCCCCTGCCAACATGATGATAATGGCGAt                                                                  >  1:497983/1‑100 (MQ=255)

                           gCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCAGCCCCCCCTGCCAACATGATGATAATGGCGATc                                                                 <  1:1183882/100‑1 (MQ=255)

                            cGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCAGCCCCCCCTGCCAACATGATGATAATGGCGATCa                                                                >  2:398187/1‑100 (MQ=255)

                            cGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCAGCCCCCCCTGCCAACATGATGATAATGGCGATCa                                                                <  2:924267/100‑1 (MQ=255)

                            cGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCAGCCCCCCCTGCCAACATGATGATAATGGCGATCa                                                                >  1:1228813/1‑100 (MQ=255)

                            cGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCAGCCCCCCCTGCCAACATGATGATAATGGCGATCa                                                                <  1:1589924/100‑1 (MQ=255)

                            cGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCAGCCCCCCCTGCCAACATGATGATAATGGCGATCa                                                                >  2:398873/1‑100 (MQ=255)

                                ggtCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACGGGCAGTTTGAGGATCGCCAGCCCCCCCGGCCAACATGATGATAATGGCGATCGCCCa                                                            >  2:1215051/3‑100 (MQ=255)

                                gaTCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCAGCCCCCCCTGCCAACATGATGATAATGGCGATCACCCa                                                            <  1:1007440/100‑1 (MQ=255)

                                   ctgtACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACTGGCAGTTTGAGGATCGCCAGCCCCCCCTGCCAACATGATGATAATGGCGATCACCCAcac                                                         <  2:1558440/97‑3 (MQ=255)

                                     ttACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCAGCCCCCCCTGCCCACATGATGATGATGGCGATCACCCACGCaa                                                       <  2:625383/100‑1 (MQ=255)

                                      tACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCAGCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCaaa                                                      >  2:1158004/1‑100 (MQ=255)

                                      tACTGCCGGCGGTGCAAGCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCAGCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCaaa                                                      >  2:1156713/1‑100 (MQ=255)

                                        cTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCAGCCCCCCCTGCCAACAGGATGATAATGGCGATCACCCACGCaaaaa                                                    >  1:2417162/1‑100 (MQ=255)

                                          gCCGGCGGTGCAATCGTAGGCTATTGCGCCCCCGGCAGTTTCAGGATCGCCAGCCCCCCCACCCAACATCATACTAAAGGTGACCACCCACGCAAAACTc                                                  >  2:2313824/1‑100 (MQ=255)

                                          gCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCAGCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATc                                                  >  1:1846680/1‑100 (MQ=255)

                                          gCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCAGCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATc                                                  >  1:176357/1‑100 (MQ=255)

                                          gCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCAGCCCCCCCGGCCAACATGATGATAATGGCGAGCACCCACGCAAAAATc                                                  >  2:481158/1‑100 (MQ=255)

                                           ccGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCAGCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCg                                                 <  2:575269/100‑1 (MQ=255)

                                           ccGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCAGCCCCCCCTGACAACATGCTGATAATGGCGATCACCCACGCAAAAATcc                                                 >  2:1484724/1‑99 (MQ=255)

                                             ggcggTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCAGCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCggg                                               <  1:588393/100‑1 (MQ=255)

                                                 gTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCAGCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGcgat                                           >  2:369370/1‑100 (MQ=255)

                                                  tGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCAGCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGcgatc                                          <  1:865926/100‑1 (MQ=255)

                                                   gtaaTCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCAGCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGcgatcg                                         <  2:2379599/98‑1 (MQ=255)

                                                   gCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCAGCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGcgatcg                                         >  1:1216000/1‑100 (MQ=255)

                                                        cGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCAGCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATaaa                                    <  1:1134742/100‑1 (MQ=255)

                                                         gTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCAGCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAg                                   >  1:545702/1‑100 (MQ=255)

                                                         gTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCAGCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAg                                   >  1:423557/1‑100 (MQ=255)

                                                          tAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCAGCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGa                                  <  1:2135612/100‑1 (MQ=255)

                                                            ggATATTGCGCCACCGGCAGTTTGAGGATCGCCAGCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGCTCGATAAAGaaa                                >  1:363329/1‑100 (MQ=255)

                                                            ggATATTGCGCCACCGGCAGTTTGAGGATCGCCAGCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGaaa                                >  2:612641/1‑100 (MQ=255)

                                                             gATATTGCGCCACCGGCAGTTTGAGGATCGCCAGCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAGAGaaag                               >  2:448552/1‑99 (MQ=255)

                                                               tatTGCGCCACCGGCAGTTTGAGGATCGCCAGCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGAAATTa                             <  1:1402086/100‑1 (MQ=255)

                                                                atTGCGCCACCGGCAGTTTGAGGATCGCCAGCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGAAATTAg                            <  1:226205/100‑1 (MQ=255)

                                                                 ttGCGCCACCGGCAGTTTGAGGATCGCCAGCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGAAATTAgg                           >  1:2136404/1‑100 (MQ=255)

                                                                 ttGCGCCACCGGCAGTTTGAGGATCGCCAGCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGAAATTAgg                           <  1:2599316/100‑1 (MQ=255)

                                                                  tGCGCCACCGGCAGTTTGAGGATCGCCAGCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGAAATTAGGc                          <  1:2039656/100‑1 (MQ=255)

                                                                    cgcCACCGGCAGTTTGAGGATCGCCAGCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGAAATTAGGCAt                        >  2:131448/1‑100 (MQ=255)

                                                                    cgcCACCGGCAGTTTGAGGATCGCCAGCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGAAATTAGGCAt                        >  1:1513475/1‑100 (MQ=255)

                                                                     gcCACCGGCAGTTTGAGGATCGCCAGCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGAAATTAGGCATg                       >  2:1389263/1‑100 (MQ=255)

                                                                        aCCGGCAGTTTGAGGATCGCCAGCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGAAATTAGGCATGTCt                    <  1:282111/100‑1 (MQ=255)

                                                                        aCCGGCAGTTTGAGGATCGCCAGCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGAAATTAGGCATGTCt                    >  1:1787166/1‑100 (MQ=255)

                                                                         ccGGCAGTTTGAGGATCGCCAGCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGAAATTAGGCATGTCtt                   >  2:535231/1‑100 (MQ=255)

                                                                         ccGGCAGTTTGAGGATCGCCAGCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGAAATTAGGCATGTCtt                   >  1:1608516/1‑100 (MQ=255)

                                                                            gCAGTTTGAGGATCGCCAGCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGAAATTAGGCATGTCTTAAc                <  2:1210745/100‑1 (MQ=255)

                                                                              aGTTTGAGGATCGCCAGCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGAAATTAGGCATGTCTTAACgg              <  1:353746/100‑1 (MQ=255)

                                                                              aGTTTGAGGATCGCCAGCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGAAATTAGGCATGTCTTAACgg              >  1:2204326/1‑100 (MQ=255)

                                                                              aGTTTGAGGATCGCCAGCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGAAATTAGGCATGTCTTAACgg              >  2:2362968/1‑100 (MQ=255)

                                                                               gTTTGAGGATCGCCAGCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGAAATTAGGCATGTCTTAACGGc             <  1:1714657/100‑1 (MQ=255)

                                                                               gTTTGAGGATCGCCAGCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGAAATTAGGCATGTCTTAACGGc             <  2:844398/100‑1 (MQ=255)

                                                                               gTTTGAGGACCGCCAGCCCCCCCTGCCAACATGATGATAATGGCGAAAAAAAAAAAAAAAATCGGGCGATCGATAAAGAAATTAGGCATGTCTTAACGGc             <  2:1047007/100‑1 (MQ=255)

                                                                                  tGAGGATCGCCAGCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGAAATTAGGCATGTCTTAACGGCTcg          >  1:2644451/1‑99 (MQ=255)

                                                                                  tGAGGATCGCCAGCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGAAATTAGGCATGTCTTAACGGCTcc          <  1:1184684/100‑1 (MQ=255)

                                                                                  tGAGGATCGCCAGCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGAAATTAGGCATGTCTTAACGGCTcc          <  1:1184708/100‑1 (MQ=255)

                                                                                  tGAGGATCGCCAGCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGAAATTAGGCATGTCTTAACGGCTcc          >  1:1202534/1‑100 (MQ=255)

                                                                                   gAGGATCGCCAGCCCCCCCTGCCAACATGATGATAATGGCGATCAACAACAAAAAAATCGGGCGATCGATAAAGAAATTAGGCATGTCTTAACGGCTCCt         <  2:2063841/100‑1 (MQ=255)

                                                                                     ggATCGCCAGCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGAAATTAGGCATGTCTTAACGGCTCCTGt       >  2:1770053/1‑100 (MQ=255)

                                                                                     ggATCGCCAGCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGAAATTAGGCATGTCTTAACGGCTCCTGt       >  1:1956944/1‑100 (MQ=255)

                                                                                     ggATCGCCAGCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGAAATTAGGCATGTCTTAACGGCTCCTGt       >  2:2505343/1‑100 (MQ=255)

                                                                                     ggATCGCCAGCCCCCCCTGCCAACATGATGATAATGGCGATAACCCACGCAAAAATCGGGCGATCGATAAAGACATTAGGCATGTCTTAACGcctcctct       >  1:2391699/1‑98 (MQ=255)

                                                                                       aTCGCCAGCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGAAATTAGGCATGTCTTAACGGCTCCTGttt     >  1:1782258/1‑100 (MQ=255)

                                                                                        tCGCCAGCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGAAATTAGGCATGTCTTAACGGCTCCTGTtta    <  2:736106/100‑1 (MQ=255)

                                                                                        tCGCCAGCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGAAATTAGGCATGTCTTAACGGCTCCTGTtta    <  2:1166035/100‑1 (MQ=255)

                                                                                          gCCAGCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGAAATTAGGCATGTCTTAACGGCTCCTGTttaag  <  1:649969/100‑1 (MQ=255)

                                                                                          gCCAGCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGAAATTAGGCATGTCTTAACGGCTCCTGTttaag  <  2:107186/100‑1 (MQ=255)

GTTTTCGCATCAGCGCCGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCAG‑CCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGAAATTAGGCATGTCTTAACGGCTCCTGTTTAAG  >  NC_000913/484237‑484425

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`