Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
JC JC	NC_000913	1,293,036	IS2 (+) +5 bp	intergenic (‑114/‑487)	hns ← / → tdk	global DNA‑binding transcriptional dual regulator H‑NS/thymidine kinase/deoxyuridine kinase

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	1293036 =	0 (0.000)	82 (0.790)	55/198	1.3	100%	intergenic (‑114/‑491)	hns/tdk	global DNA‑binding transcriptional dual regulator H‑NS/thymidine kinase/deoxyuridine kinase
	?	NC_000913	= 1651548	NA (NA)					noncoding (706/706 nt)	IS2	repeat region
*	?	NC_000913	= 1293040	0 (0.000)	76 (0.730)	50/198	1.8	100%	intergenic (‑118/‑487)	hns/tdk	global DNA‑binding transcriptional dual regulator H‑NS/thymidine kinase/deoxyuridine kinase
	?	NC_000913	= 1469240	NA (NA)					noncoding (1/1331 nt)	IS2	repeat region

GGAAGTTTTAACCTCACGTGCTGCGAAATCATCGGTGTAAATAGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/1293134‑1293036 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTA  <  NC_000913/1651548‑1651450                                                                                                                                                                                                        GGAAGTTTTAACCTCACGTGCTGCGAAATCATCGGTGTAAATAGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCT                                                                                                    <  2:2227217/100‑1 GGAAGTTTTAACCTCACGTGCTGCGAAATCATCGGTGTAAATAGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCT                                                                                                    >  1:148050/1‑100 GGAAGTTTTAACCTCACGTGCTGCGAAATCATCGGTGTAAATAGGGCTATATGCCGCGTCTTTTCCGGCTAATTTTATGAAAAGATATTTATTGGCGGCT                                                                                                    <  2:249576/100‑1  GAAGTTTTAACCTCACGTGCTGCGAAATCATCGGTGTAAATAGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCTG                                                                                                   >  2:2091939/1‑100    AGTTTTAACCTCACGTGCCGAGAAATCATCGGTGTAAATAGGGCTATATGCCGCGTCTTTTCTGGCTCATTTTATGAAAAGATATTTATTGGCGGCTGGA                                                                                                 <  2:1108184/100‑1     GTTTTAACCTCACGTGCTGCGAAATCATCGGTGTAAATAGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCTGGAT                                                                                                >  1:62276/1‑100      TTTTAACCTCACGTGCTGCGAAATCATCGGTGTAAATAGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCTGGATT                                                                                               >  2:592548/1‑100          AACCTCACGTGCTGCGAAATCATCGGTGTAAATAGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCTGGATTTGCC                                                                                           <  1:936987/100‑1          AACCTCACGTGCTGCGAAATCATCGGTGTAAATAGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCTGGATTTGCC                                                                                           <  1:1386897/100‑1          AACCTCACGTGCTGCGAAATCATCGGTGTAAATAGGGCTATATGCCGCGTCTTTTCTGACTAATTTTATGAAAAGATATTTATTGGAGGCTGGATTTGCC                                                                                           <  2:1056861/100‑1           ACCTCACGTGCTGCGAAATCATCGGTGTAAATAGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCTGGCTTTGCCC                                                                                          >  2:2125485/1‑100           ACCTCACGTGCTGCGAAATCATCGGTGTAAATAGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCTGGATTTGCCC                                                                                          <  1:1566997/100‑1            CCTCACGTGCTGCGAAATCATCGGTGTAAATAGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCTGGATTTGCCCC                                                                                         <  1:93679/100‑1            CCTCACGTGCTGCGAAATCATCGGTGTAAATAGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCTGGATTTGCCCC                                                                                         <  2:621908/100‑1            CCTCACGTGCTGCGAAATCATCGGTGTAAATAGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCTGGATTTGCCCC                                                                                         <  2:1090500/100‑1            CCTCACGTGCTGCGAAATCATCGGTGTAAATAGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCTGGATTTGCCCC                                                                                         <  1:351276/100‑1             CTCACGTGCTGCGAAATCATCGGTGTAAATAGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCTGGATTTGCCCCT                                                                                        >  2:2164859/1‑100              TCACGTGCTGCGAAATCATCGGTGTAAATAGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCTGGATTTGCCCCTA                                                                                       <  2:2275502/100‑1               CACGTGCTGCGAAATCATCGGTGTAAATAGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCTGGATTTGCCCCTAT                                                                                      >  1:974219/1‑100                 CGTGCTGCGAAATCATCGGTGTAAATAGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCTGGATTTGCCCCTATAT                                                                                    <  2:617281/100‑1                  GTGCTGCGAAATCATCGGTGTAAATAGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCTGGATTTGCCCCTATATT                                                                                   <  1:930344/100‑1                   TGCTGCGAAATCATCGGTGTAAATAGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCTGGATTTGCCCCTATATTT                                                                                  >  1:1163975/1‑100                    GCTGCGAAATCATCGGTGTAAATAGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCTGGATTTGCCCCTATATTTC                                                                                 >  1:1027823/1‑100                     CTGCGAAATCATCGGTGTAAATAGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCTGGATTTGCCCCTATATTTCC                                                                                <  1:386458/100‑1                      TGCGAAATCATCGGTGTAAATAGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCTGGATTTGCCCCTATATTTCCA                                                                               >  1:145244/1‑100                      TGCGAAATCATCGGTGTAAATAGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCTGGATTTGCCCACATATTTACA                                                                               >  2:1537777/1‑100                      TGCGAAATCATCGGTGTAAATAGAGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCTGGATTTGCCCCTATATTTCCA                                                                               <  2:177265/100‑1                       GCGAAATCATCGGTGTAAATAGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCTGGATTTGCCCCTATATTTCCAG                                                                              >  1:1218664/1‑100                       GCGAAATCATCGGTGTAAATAGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCTGGATTTGCCCCTATATTTCCAG                                                                              <  1:736910/100‑1                       GCGAAATCATCGGTGTAAATAGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCTGGATTTGCCCCTATATTTCCAG                                                                              >  1:1782770/1‑100                              CATCGGTGTAAATAGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCTGGATTTGCCCCTATATTTCCAGACATCTG                                                                       >  2:175810/1‑100                              CATCGGTGTAAATAGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCTGGATTTGCCCCTATATTTCCAGACATCTG                                                                       >  1:501135/1‑100                              CATCGGTGTAAATAGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCTGGATTTGCCCCTATATTTCCAGACATCTG                                                                       >  2:936934/1‑100                                taGGTGTAAATAGGGCTATATGCCGCGTCTTTTCTGGCTAATTCTATCAAAAGATATTTATTGGCGGCTGTATTTGCCCCTATATTTCCAGACATCTGTT                                                                     <  2:499132/98‑1                                TCGGTGTAAATAGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCTGGATTTGCCCCTATATTTCCAGACATCTGTT                                                                     <  1:1672424/100‑1                                 CGGTGTAAATAGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCTGGATTTGCCCCTATATTTCCAGACCTCTGTTA                                                                    >  1:2259008/1‑100                                 CGGTGTAAATAGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCTGGATTTGCCCCTATATTTCCAGACATCTGTTA                                                                    >  2:1199222/1‑100                                  GGTGTAAATAGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCTGGATTTGCCCCTATATTTCCAGACATCTGTTAT                                                                   <  2:859891/100‑1                                   GTGTAAATAGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATC                                                                  >  1:312628/1‑100                                     GTAAATAGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCAC                                                                <  2:884422/100‑1                                      nAAATAGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACT                                                               >  1:2110808/2‑100                                      TAAATAGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACT                                                               <  2:2033014/100‑1                                       AAATAGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTT                                                              >  2:1358983/1‑100                                       AAATAGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTT                                                              >  2:2130399/1‑100                                         ATAGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAA                                                            >  2:1320711/1‑100                                            GGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCC                                                         <  2:131369/100‑1                                              GCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCAT                                                       <  1:1279469/100‑1                                                TATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTA                                                     <  1:1047388/100‑1                                                 ATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTAC                                                    <  2:159015/100‑1                                                 ATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTAC                                                    <  2:158676/100‑1                                                   ATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAA                                                  <  1:1300795/100‑1                                                     GCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAtc                                                >  2:814101/1‑98                                                     GCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGC                                                >  2:1307949/1‑100                                                        GCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCG                                             >  1:1628176/1‑100                                                           TCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCTGGATTTGCCCCTATATTTCCAGCCATCTGTTATCACTTAACCCATTACAAGCCCGCTG                                          >  1:786887/1‑100                                                           TCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTG                                          >  2:315245/1‑100                                                            CTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGC                                         >  2:1722542/1‑100                                                            CTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGC                                         >  1:1047025/1‑100                                                               TTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGC                                      <  2:2108737/100‑1                                                                TCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTGAACCCATTACAAGCCCGCTGCCGCA                                     <  1:483620/100‑1                                                                 CTGGCTAATTTTATGAAAAGATATTTATTGGCGGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAG                                    <  1:1150388/100‑1                                                                   GGCTAATTTTATGAAAAGATATTTATTGGCGGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGAT                                  >  1:2271591/1‑100                                                                           TTATGAAAAGATATTTATTGGCGGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGT                          >  2:1813263/1‑100                                                                             ATGAAAAGATATTTATTGGCGGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGG                        >  2:1611321/1‑100                                                                               GAAAAGATATTTATTGGCGGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCG                      >  2:1211653/1‑100                                                                                AAAAGATATTTATTGGCGGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGA                     >  2:2224492/1‑100                                                                                 AAAGATATTTATTGGCGGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAG                    >  1:642854/1‑100                                                                                   AGATATTTATTGGCGGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCG                  >  1:1999505/1‑100                                                                                     ATATTTATTGGCGGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGAT                <  2:2451864/100‑1                                                                                        TTTATTGGCGGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAAC             <  1:1537270/100‑1                                                                                        TTTATTGGCGGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAAC             <  1:666504/100‑1                                                                                        TTTATTGGCGGCTGGATTTGCCCCTAGATTTCCAGACATCTGTTATCACTTAACCCATTACAACCCCCCTGCCGCAGATATTCTCGTGGCGAGCGATAAC             >  2:341268/1‑100                                                                                          TATTGGCGGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCC           >  1:2290703/1‑100                                                                                           ATTGGCGGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCACGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCA          >  2:1288344/1‑100                                                                                                 GGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCAC    >  1:1285875/1‑100                                                                                                  GCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACT   >  2:410378/1‑100                                                                                                  GCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACT   <  1:1421787/100‑1                                                                                                  GCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACT   >  2:621672/1‑100                                                                                                  GCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACT   <  2:223193/100‑1                                                                                                  GCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTACCGTGGCGAGCGATAACCCAGCGCACT   >  1:329803/1‑100                                                                                                   CTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTA  >  2:16179/1‑100                                                                                                   CTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTA  <  2:2518242/100‑1                                                                                                                                                                                                        GGAAGTTTTAACCTCACGTGCTGCGAAATCATCGGTGTAAATAGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/1293134‑1293036 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTA  <  NC_000913/1651548‑1651450

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.