New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 2305015NA (NA)23 (0.330)
+CTACGGGGTGGAGCACTTCACAGCGGTGTAGGC		 7/132 10.0 NA noncoding (599/655 nt) REP161 (repetitive extragenic palindromic) element; contains 12 REP sequences REP161 (repetitive extragenic palindromic) element; contains 12 REP sequences
?NC_000913 = 2305065 NA (NA)noncoding (649/655 nt) REP161 (repetitive extragenic palindromic) element; contains 12 REP sequences REP161 (repetitive extragenic palindromic) element; contains 12 REP sequences
Rejected: Coverage evenness skew score above cutoff.

GTGAAGTGCTCCACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCAAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/2304965‑2305015
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTGATAAGACGCGCCAGCGTCGCATCAGGCAACCGGCTCGGGCGTTAG  <  NC_000913/2305065‑2305018
                                                   |||||||||||||||||||||||||||||||||                                                
GTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCATCCGACCTACGGGGTGGAGCACTTCACAGCGGTGTAGGCCTGATAAGACGCGCCA                                  >  1:1158500/1‑100
    AGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCATCCGACCTACGGGGTGGAGCACTTCACAGCGGTGTAGGCCTGATAAGACGCGCCAGCGT                              >  2:1964116/1‑100
         TCCACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCAACCTACGGGGTGGAGCACTTCACAGCGGTGTAGGCCTGATAAGACGCGCCAGCGTCGCAT                         >  1:140228/1‑100
         TCCACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCAACCTACGGGGTGGAGCACTTCACAGCGGTGTAGGCCTGATAAGACGCGCCAGCGTCGCAT                         >  1:513065/1‑100
             CCCCGTAGGTCGGATAAGGCGGTTACGCCGCATCCGACCTACGGGGTGGAGCACTTCACAGCGGTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGG                     >  2:360566/1‑100
               CCGTAGGTTGGATAAGGCGGTTACGCCGCATCCAACCTACGGGGTGGAGCACTTCACAGCGGTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCA                   >  1:1658483/1‑100
                  TAGGTTGGATAAGGCGGTTACGCCGCATCCAACCTACGGGGAGGAGCACTTCACAGCGGTGTAGGCCTGATACGACGCGCCAGCGTCGCATCAGGCAACC                >  2:1187880/1‑100
                   AGGTTGGATAAGGCGGTTACGCCGCATCCAACCTACGGGGTGGAGCACTTCACAGCGGTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAACCG               >  1:901786/1‑100
                     gtcGGATAAGGCGGTTACGCCGCATCCGACCTACGGGGTGGAGCACTTCACAGCGGTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCACGCAACCGGC             >  2:2245398/4‑100
                     GTTGGATAAGGCGGTTACGCCGCATCCAACCTACGGGGTGGAGCACTTCACAGCGGTGTAGGCCTGATAAGACGCGCCGGCGTCGCATCAGGCAACCGGC             >  2:1720934/1‑100
                     GTTGGATAAGGCGGTTACGCCGCATCCAACCTACGGGGTGGAGCACTTCACAGCGGTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAACCGGC             >  1:1675228/1‑100
                     GTTGGATAAGGCGGTTACGCCGCATCCAACCTACGGGGTGGAGCACTTCACAGCGGTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAACCGGC             >  1:2329223/1‑100
                      TTGGATAAGGCGGTTACGCCGCATCCAACCTACGGGGTGGAGCACTTCACAGCGGTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAACCGGCT            >  1:1353859/1‑100
                        GGATAAGGCGGTTACGCCGCATCCGACCTACGGGGTGGAGCACTTCACAGCGGTGTAGGCCCGATAAGACGCGCCAGCGTCGCATCAGGCAACCGGCTCG          >  1:842355/1‑100
                        GGATAAGGCGGTTACGCCGCATCCGACCTACGGGGTGGAGCACTTCACAGCGGTGTAGGCCCGATAAGACGCGCCAGCGTCGCATCAGGCAACCGGCTCG          >  1:641629/1‑100
                        GGATAAGGCGGTTACGCCGCATCCGACCTACGGGGTGGAGCACTTCACAGCGGTGTAGGCCCGATAAGACGCGCCAGCGTCGCATCAGGCAACCGGCTCG          >  2:1748123/1‑100
                        GGATAAGGCGGTTACGCCGCATCCGACATACGGGGTGGAGCACTTCACAGCGGTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAGCCGGCTCG          >  1:2549511/1‑100
                        GGATAAGGCGGTTACGCCGCATCCAACCTACGGGGTGGAGCACTTCACAGCGGTGTAGGCCTGATAAGACGCGCCATCGTCACAGCAGCCAGCCGGCTag          >  2:331672/1‑98
                         GATAAGGCGGTTACGCCGCATCCAACCTACGGGGTGGAGCACTTCACAGCGGTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAACCGGCTTGG         >  1:316952/1‑100
                         GATAAGGCGGTTACGCCGCATCCAACCTACGGGGTGGAGCACTTCACAGCGGTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAACCGGCTTGG         >  2:2332348/1‑100
                         GATAAGGCGGTTACGCCGCATCCAACCTACGGGGTGGAGCACTTCACAGCGGTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAACCGGCTTGG         >  2:2484638/1‑100
                         GATAAGGCGGTTACGCCGCATCCAACCTACGGGGTGGAGCACTTCACAGCGGTGTAGGCCTGAGAAGACGCGCCAGCGTCGCATCAGGCAACCGGCTTGG         >  1:2486558/1‑100
                                CGGTTACGCCGCATCCGACCTACGGGGTGGAGCACTTCACAGCGGTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAACCGGCTCGGGCGTTAG  >  2:175696/1‑100
                                                   |||||||||||||||||||||||||||||||||                                                
GTGAAGTGCTCCACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCAAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/2304965‑2305015
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTGATAAGACGCGCCAGCGTCGCATCAGGCAACCGGCTCGGGCGTTAG  <  NC_000913/2305065‑2305018

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.