| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,755,880 | 0 | G | A | 52.4% | 158.4 / inf | 863 | intergenic (+502/‑279) | smpB/intA | tmRNA‑binding trans‑translation protein/CP4‑57 prophage; integrase |
| Reads supporting (aligned to +/- strand): ref base G (103/307); new base A (68/383); total (172/691) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.33e-04 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.93e-01 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 871 total aligned reads displayed.
CAAAAGAGATCGCGTGGAAGCCCTGCCTGGGGTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATGTAAAGACTGACTAAGCATGTAGTACCGAGGATGTAGGAATTTCGGACGCGGGTTCAACTCCCGCCAGCTCCACCAAAATTCTCCATCGGTGATTACCAG > NC_000913/2755781‑2755979 | aaaaGAGATCGCGTGGAAGCCCTGCCTGGGGTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATGt > 2:1380047/1‑100 (MQ=255) gagaTCGCGTGGAAGCCCTGCCTGGGGTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATGTAAAg > 2:723608/1‑100 (MQ=255) aTCGCGTGGAAGCCCTGCCTGGGGTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATATAAAgact > 2:32969/1‑100 (MQ=255) cgcgTGGAAGCCCTGCCTGGGGTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATGTAAAgactga > 2:548930/1‑100 (MQ=255) cgcgTGGAAGCCCTGCCTGGGGTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATATAAAgactga > 2:1458485/1‑100 (MQ=255) gcgTGGAAGCCCTGCCTGGGGTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATGTAAAgactgac < 1:1646270/100‑1 (MQ=255) cgTGGAAGCCCTGCCTGGGGTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGCATGTAAAgactgact > 2:2278220/1‑100 (MQ=255) cgTGGAAGCCCTGCCTGGGGTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATGTAAAgactgact > 2:2585367/1‑100 (MQ=255) cgTGGAAGCCCTGCCTGGGGTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATATAAAgactgact > 2:2058105/1‑100 (MQ=255) aaGCCCTGCCTGGGGTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCTCAGCTGCCAAGCGAATGTAAAGACTGACTAAGCa > 2:2479441/1‑100 (MQ=255) aaGCCCTGCCTGGGGTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATGTAAAGACTGACTAAGCa < 1:808414/100‑1 (MQ=255) gCCCTGCCTGGGGTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATGTAAAGACTGACTAAGCATg > 2:1581981/1‑100 (MQ=255) gCCCTGCCTGGGGTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATATAAAGACTGACTAAGCATg < 1:411096/100‑1 (MQ=255) cccTGCCTGGGGTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATGTAAAGACTGACTAAGCATgt > 2:1681220/1‑100 (MQ=255) cccTGCCTGGGGTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATATAAAGACTGACTAAGCATgt > 2:1225661/1‑100 (MQ=255) cctgcctgGGGTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCAGTCCGCAGCTGGCAAGCGAATATAAAGACTGACTAAGAATgta > 2:832317/1‑100 (MQ=255) ctgcctgGGGGTGAAGCGTTAATACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATATAAAGACTGACTAAGCATgcag < 1:1129085/100‑1 (MQ=255) gcctgGGGTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATGTAAAGACTGACTAAGCATgtagta < 1:1828127/100‑1 (MQ=255) cctgGGGTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATGTAAAGACTGACTAAGCATGTAGTAc < 1:497555/100‑1 (MQ=255) cctgGGGTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATATAAAGACTGACTAAGCATGTAGTAc < 1:670632/100‑1 (MQ=255) cctgGGGTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATATAAAGACTGACTAAGCATGTAGTAc < 1:1008932/100‑1 (MQ=255) ctgGGGTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATGTAAAGACTGACTAAGCATGTAGTAcc < 1:2633121/100‑1 (MQ=255) ctgGGGTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATATAAAGACTGACTAAGCATGTAGTAcc < 1:2398493/100‑1 (MQ=255) ctgGGGTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATATAAAGACTGACTAAGCATGTAGTAcc < 1:1193204/100‑1 (MQ=255) tgGGGTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATGTAAAGACTGACTAAGCATGTAGTACCg > 2:100895/1‑100 (MQ=255) tgGGGTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATGTAAAGACTGACTAAGCATGTAGTACCg < 1:1158614/100‑1 (MQ=255) tgGGGTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATGTAAAGACTGACTAAGCATGTAGTACCg < 1:1748272/100‑1 (MQ=255) tgGGGTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATGTAAAGACTGACTAAGCATGTAGTACCg < 1:783571/100‑1 (MQ=255) tgGGGTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATGTAAAGACTGACTAAGCATGTAGTACCg < 1:1907838/100‑1 (MQ=255) tgGGGTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATGTAAAGACTGACTAAGCATGTAGTACCg > 2:2394349/1‑100 (MQ=255) ggggTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATGTAAAGACTGACTAAGCATGTAGTACCGa > 2:1327317/1‑100 (MQ=255) tggTTGAAGCGTTAAAACTTAATCAGGCTAGTGTGTTAGTGGCGTGGCCGTCCGCAGCTGGCAAGCGAATATAAAGACTGACTAAGCATGTAGTACCGAg < 1:177205/99‑1 (MQ=255) gtgTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATATAAAGACTGACTAAGCATGTAGTACCGAg < 1:838414/98‑1 (MQ=255) gggTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATGTAAAGACTGACTAAGCATGTAGTACCGAg < 1:1483360/100‑1 (MQ=255) gggTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATGTAAAGACTGACTAAGCATGTAGTACCGAg < 1:978660/100‑1 (MQ=255) gggTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATGTAAAGACTGACTAAGCATGTAGTACCGAg < 1:1311402/100‑1 (MQ=255) gggTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATGTAAAGACTGACTAAGCATGTAGTACCGAg < 1:1346098/100‑1 (MQ=255) gggTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATATGAAGACTGACTAAGCATGTAGTACCGAg < 1:69728/100‑1 (MQ=255) gggTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATATAAAGACTGACTAAGCATGTAGTACCGAg < 1:441495/100‑1 (MQ=255) gggTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATATAAAGACTGACTAAGCATGTAGTACCGAg < 1:2506312/100‑1 (MQ=255) gggTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATATAAAGACTGACTAAGCATGTAGTACCGAg < 1:359016/100‑1 (MQ=255) gggTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATATAAAGACTGACTAAGCATGTAGTACCGAg < 1:328695/100‑1 (MQ=255) gggTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATATAAAGACTGACTAAGCATGTAGTACCGAg < 1:232244/100‑1 (MQ=255) gggTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATATAAAGACTGACTAAGCATGTAGTACCGAg < 1:1028179/100‑1 (MQ=255) gggTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATATAAAGACTGACTAAGCATGTAGTACCGAg < 1:1251228/100‑1 (MQ=255) gggTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATATAAAGACTGACTAAGCATGTAGTACCGAg < 1:1936296/100‑1 (MQ=255) gggTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATATAAAGACTGACTAAGCATGTAGTACCGAg < 1:1977384/100‑1 (MQ=255) gggTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATATAAAGACTGACTAAGCATGTAGTACCGAg < 1:2151512/100‑1 (MQ=255) gggTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGGCCGCAGCTGGCAAGCGAATGTAAAGACTGACTAAGCATGTAGTACCGAg < 1:2180445/100‑1 (MQ=255) gggTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGCTCGTGGCGTGTCCGCCCGCAGCTGGCAAGCGAATATAAAGACTGACTAAGCATGTAGTAACggg < 1:2577238/100‑3 (MQ=255) gatctGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATATAAAGACTGACTAAGCATGTAGTACCGAg < 1:128592/96‑1 (MQ=255) cggTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATATAAAGACTGACTAAGCATGTAGTACCGAg < 1:2078138/99‑1 (MQ=255) atcttGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATATAAAGACTGACTAAGCATGTAGTACCGAg < 1:756797/97‑1 (MQ=255) ggTTGAAGCGTTATAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGGCCGCAGCTGGCAAGCGAATATAAAGACTGACTAAGCATGTAGTCCCGCgg < 1:2380232/100‑1 (MQ=255) ggTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATGTAAAGACTGACTAAGCATGTAGTACCGAgg < 1:1546354/100‑1 (MQ=255) ggTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATGTAAAGACTGACTAAGCATGTAGTACCGAgg < 1:1326383/100‑1 (MQ=255) ggTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATGTAAAGACTGACTAAGCATGTAGTACCAAgg < 1:1889364/100‑1 (MQ=255) ggTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATATAAAGACTGACTAAGCATGTAGTACCGAgg < 1:2350300/100‑1 (MQ=255) ggTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATATAAAGACTGACTAAGCATGTAGTACCGAgg < 1:1072179/100‑1 (MQ=255) ggTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATATAAAGACTGACTAAGCATGTAGTACCGAgg < 1:137609/100‑1 (MQ=255) ggTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATATAAAGACTGACTAAGCATGTAGTACCGAgg < 1:1504298/100‑1 (MQ=255) ggTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATATAAAGACTGACTAAGCATGTAGTACCGAgg < 1:534171/100‑1 (MQ=255) ggTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATATAAAGACTGACTAAGCATGTAGTACCGAgg < 1:572387/100‑1 (MQ=255) ggTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATATAAAGACTGACTAAGCATGTAGTACCGAgg < 1:636982/100‑1 (MQ=255) ggTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATATAAAGACTGACTAAGCATGTAGTACCGAgg < 1:2437802/100‑1 (MQ=255) ggTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATATAAAGACTGACTAAGCATGTAGTACCGAgg < 1:1622798/100‑1 (MQ=255) ggTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATATAAAGACTGACTAAGCATGTAGTACCGAgg < 1:1692714/100‑1 (MQ=255) ggTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATATAAAGACTGACTAAGCATGTAGTACCGAgg < 1:2549887/100‑1 (MQ=255) ggTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATATAAAGACTGACTAAGCATGTAGTACCGAga > 2:174458/1‑99 (MQ=255) ttGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATGTAAAGACTGACTAAGCATGTAGTACCGAGGAt < 1:309302/100‑1 (MQ=255) ttGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATATAAAGACTGACTAAGCATGTAGTACCGAGGAt < 1:2241971/100‑1 (MQ=255) ttGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATATAAAGACTGACTAAGCATGTAGTACCGAGGAt < 1:1578653/100‑1 (MQ=255) ttGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATATAAAGACTGACTAAGCATGTAGTACCGAGGAt < 1:902879/100‑1 (MQ=255) tGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATGTAAAGACTGACTAAGCATGTAGTACCGAGGATg < 1:943642/100‑1 (MQ=255) aGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATGTAAAGACTGACTAAGCATGTAGTACCGAGGATGTAg < 1:1797200/100‑1 (MQ=255) aGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATGTAAAGACTGACTAAGCATGTAGTACCGAGGATGTAg < 1:1227476/100‑1 (MQ=255) aGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATATAAAGACTGACTAAGCATGTAGTACCGAGGATGTAg < 1:1108185/100‑1 (MQ=255) aGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATATAAAGACTGACTAAGCATGTAGTACCGAGGATGTAg < 1:1400879/100‑1 (MQ=255) aGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATATAAAGACTGACTAAGCATGTAGTACCGAGGATGTAg < 1:2005031/100‑1 (MQ=255) gCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATGTAAAGACTGACTAAGCATGTAGTACCGAGGATGTAgg < 1:593250/100‑1 (MQ=255) gCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATGTAAAGACTGACTAAGCATGTAGTACCGAGGATGCAgg < 1:475873/100‑1 (MQ=255) gCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATATAAAGACTGACTAAGCATGTAGTACCGAGGATGTAgg < 1:1450128/100‑1 (MQ=255) cGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATATAAAGACTGACTAAGCATGTAGTACCGAGGATGTAggc < 1:876887/100‑2 (MQ=255) ttAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATGTAAAGACTGACTAAGCATGTAGTACCGAGGATGTAGGaaa < 1:1462251/100‑2 (MQ=255) aaaCTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGACTGTAAAGACTGACTAAGCGTGTAGGAGCGAGGATGTAGGAATTTc > 1:2471990/1‑100 (MQ=255) aCTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATATAAAGACTGACTAAGCATGTAGTACCGAGGATGTAGGAATTTCgg < 1:2056927/100‑1 (MQ=255) cTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATGTAAAGACTGACTAAGCATGTAGTACCGAGGATGTAGGAATTTCGGACGCGGGTTCa < 1:2293690/100‑1 (MQ=255) gTGGCGTATCCGTCCGCAGCTGGCCAGCGAATGTCAAGACTGACTACGCCTGTAGTACCGAGGCTGTAGGAATTTCGGACGCGGGCTCAACTCCCGCCAg > 2:480954/1‑100 (MQ=255) ggCGTGTCCGTCCGCAGCTGGCAAGCGAATGTAAAGACTGACTAAGCATGTAGTACCGAGGATGTAGGAATTTCGGACGCGGGTTCAACTCCCGCCAGCt > 2:1967600/1‑100 (MQ=255) tgtCCGTCCGCAGCTGGCAAGCGAATGTAAAGACTGACTAAGCATGTAGTACCGAGGATGTAGGAATTTCGGACGCGGGTTCAACTCCCGCCAGCTccac < 1:728821/100‑1 (MQ=255) tgcccgtccgCAGCTGGCAAGCGAATGTAAAGACTGACTAAGCATGTAGTACCGAGGATGTAGGAATTTCGGACGCGGGTTCAACTCCCGCCAGCTccac < 1:273935/97‑1 (MQ=255) gtccgtccGCAGCTGGCAAGCGAATGTAAAGACTGACTAAGCATGTAGTACCGAGGATGTAGGAATTTCGGACGCGGGTTCAACTCCCGCCAGCTccacc < 1:2522452/100‑1 (MQ=255) gtccgtccGCAGCTGGCAAGCGAATGTAAAGACTGACTAAGCATGTAGTACCGAGGATGTAGGAATTTCGGACGCGGGTTCAACTCCCGCCAGCTccacc < 1:210135/100‑1 (MQ=255) gtccgtccGCAGCTGGCAAGCGAATGTAAAGACTGACTAAGCATGTAGTACCGAGGATGTAGGAATTTCGGACGCGGGTTCAACTCCCGCCAGCTccacc < 1:1721312/100‑1 (MQ=255) gtccgtccGCAGCTGGCAAGCGAATATAAAGACTGACTAAGCATGTAGTACCGAGGATGTAGGAATTTCGGACGCGGGTTCAACTCCCGCCAGCTccacc < 1:1856991/100‑1 (MQ=255) ccgtccgCAGCTGGCAAGCGAATGTAAAGACTGACTAAGCATGTAGTACCGAGGATGTAGGAATTTCGGACGCGGGTTCAACTCCCGCCAGCTccaccag > 2:1106098/1‑99 (MQ=255) ggCAAGCGAATGTAAAGACTGACTAAGCATGTAGTACCGAGGATGTAGGAATTTCGGACGCGGGTTCAACTCCCGCCAGCTCCACCAAAATTCTCCATCg > 1:2035184/1‑100 (MQ=255) aaGCGAATGTAAAGACTGACTAAGCATGTAGTACCGAGGATGTAGGAATTTCGGACGCGGGTTCAACTCCCGCCAGCTCCACCAAAATTCTCCATCGGTg < 1:383071/100‑1 (MQ=255) aaGCGAATGTAAAGACTGACTAAGCATGTAGTACCGAGGATGTAGGAATTTCGGACGCGGGTTCAACTCCCGCCAGCTCCACCAAAATTCTCCATCGGTg < 1:2214507/100‑1 (MQ=255) tGTAAAGACTGACTAAGCATGTAGTACCGAGGATGTAGGAATTTCGGACGCGGGTTCAACTCCCGCCAGCTCCACCAAAATTCTCCATCGGTGATTACCa < 2:1885247/100‑1 (MQ=255) | CAAAAGAGATCGCGTGGAAGCCCTGCCTGGGGTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATGTAAAGACTGACTAAGCATGTAGTACCGAGGATGTAGGAATTTCGGACGCGGGTTCAACTCCCGCCAGCTCCACCAAAATTCTCCATCGGTGATTACCAG > NC_000913/2755781‑2755979 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |