| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 986,023 | 0 | G | A | 41.1% | 117.4 / 197.0 | 180 | G320G (GGC→GGT) | ompF | outer membrane porin 1a (Ia;b;F) |
| Reads supporting (aligned to +/- strand): ref base G (60/46); new base A (25/49); total (85/95) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.81e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.49e-01 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 183 total aligned reads displayed.
GGTGTCGTCTGAACCTACGCCCAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGTCTTTCGCTTTAGATTTGGTGTAAGCGATGGACGGACGCAGACCGAAATCG > NC_000913/985924‑986122 | ggTGTCGTCTGAACCTACGCCCAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTgcg > 1:2589013/1‑100 (MQ=255) gtcgccTGAACCTACGCCCAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCAccc > 1:1483744/1‑100 (MQ=255) ngtcTGAACCTACGCCCAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCACCCAc > 1:393115/2‑100 (MQ=255) cgtcTGAACCTACGCCCAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCAACATCGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCACCCAc > 1:653616/1‑100 (MQ=255) cgtcTGAACCTACGCACAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCAc > 2:1885642/1‑100 (MQ=255) gtcTGAACCTACGCCCAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACt < 2:862470/100‑1 (MQ=255) gtcTGAACCTACGCCCAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACt < 2:2378568/100‑1 (MQ=255) gtcTGAACCTACGCCCAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCACCCACt < 2:372728/100‑1 (MQ=255) gtcTGAACCTACGCCCAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCACCCACt > 1:2247319/1‑100 (MQ=255) tcTGAACCTACGCCCAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCAACtt > 1:787621/1‑100 (MQ=255) tatGAACCTACGCCCAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCACCCACtt > 2:2408751/3‑100 (MQ=255) tGAACCTACGCCCAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCa > 2:1744345/1‑100 (MQ=255) aCCTACGCCCAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCACCCACTTCAAag < 2:2137546/100‑1 (MQ=255) cTACGCCCAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCACCCACTTCAAagta < 2:911713/100‑1 (MQ=255) tACGCCCAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCACCCACTTCAAagtag < 2:1430337/100‑1 (MQ=255) tACGCCCAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCACCCACTTCAAagtag < 2:687640/100‑1 (MQ=255) caCGCCCAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCAACATCGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCACGCACTTCAAagtag > 1:2378033/2‑100 (MQ=37) atctcccAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCACCCACTTCAAagtag < 2:2444701/96‑1 (MQ=255) aCGCCCAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAagtagt < 2:1098380/100‑1 (MQ=255) aCGCCCAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCACCCACTTCAAagtagt < 2:1885582/100‑1 (MQ=255) cGCCCAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCACCCACTTCAAAGTAGtt > 1:2588388/1‑100 (MQ=255) gCCCAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTc < 2:75239/100‑1 (MQ=255) cccAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCa > 1:769154/1‑100 (MQ=255) cccAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCACCCACTTCAAAGTAGTTCa > 1:911788/1‑100 (MQ=255) cccAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCACCCACTTCAAAGTAGTTCa > 1:2166450/1‑100 (MQ=255) ccAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCAc > 1:1360649/1‑100 (MQ=255) cAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTGTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCAcc > 1:879998/1‑100 (MQ=255) tgttgtCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATc < 1:1790659/100‑1 (MQ=255) gttgtCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCa > 1:1709019/1‑100 (MQ=255) ttgtCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCan < 1:458441/100‑2 (MQ=255) gtCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACa < 1:1733122/100‑1 (MQ=255) gtCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCACCCACTTCAAAGTAGTTCACCAGATCAACa > 1:1593931/1‑100 (MQ=255) gtCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCACCCACTTCAAAGTAGTTCACCAGATCAACa > 1:2183837/1‑100 (MQ=255) gtCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCACCCACTTCAAAGTAGTTCACCAGATCAACa < 2:1463256/100‑1 (MQ=255) gtCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCACCCACTTCAAAGTAGTTCACCAGATCAACa > 1:555508/1‑100 (MQ=255) gtCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCACCCACTTCAAAGTAGTTCACCAGATCAACa < 2:844342/100‑1 (MQ=255) tCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACAt > 1:2040096/1‑100 (MQ=255) cAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTTTTTTTTTAGATTGCGCCCACTTCAAAGTAGTTCACGAGTTCAACATc > 2:1691715/1‑100 (MQ=25) aTCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACATCACCg < 2:2048307/100‑1 (MQ=255) aTCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACATCACCg > 1:1854069/1‑100 (MQ=255) aTCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCACCCACTTCAAAGTAGTTCACCAGATCAACATCACCg < 2:301562/100‑1 (MQ=255) tCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACATCACCGa < 2:351433/100‑1 (MQ=255) cGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCACCCACTTCAAAGTAGTTCACCAGATCAACATCACCGAt < 2:1254517/100‑1 (MQ=255) gATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTTAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACGAGATCAACATCACCGATa > 2:1231840/1‑100 (MQ=255) aTCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATAc < 2:1547474/100‑1 (MQ=255) tCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATAcc < 1:1284990/100‑1 (MQ=255) ttGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTa < 1:106612/100‑1 (MQ=255) tgatgaTGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCACCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTAc < 2:2095144/100‑1 (MQ=255) atgatgTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGt > 2:1594759/1‑100 (MQ=255) atgatgTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGt < 1:280864/100‑1 (MQ=255) atgTAGTCAACATAGGTGTACATGTTTTTGTTGAAGTAGTAGGTTGCACCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGTCtt < 2:636213/100‑1 (MQ=255) tgTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCACCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGTCttt < 2:1572023/100‑1 (MQ=255) gTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGTCTTTc > 1:1369350/1‑100 (MQ=255) tAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGTCTTTcc < 2:1349935/100‑2 (MQ=255) tAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGTCTTTCg > 1:1990415/1‑100 (MQ=255) aGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGTCTTTCGc > 1:532356/1‑100 (MQ=255) gTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGTCTTTCGCt > 1:119163/1‑100 (MQ=255) cATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCACCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGTCTTTCGCTTTAGa > 1:363407/1‑100 (MQ=255) tAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGTCTTTCGCTTTAGAtt > 1:1011894/1‑100 (MQ=255) ggTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGTCTTTCGCTTTAGATTTg > 1:2257257/1‑100 (MQ=255) ggTGGACATGTTTTTGTTGAAGTAGTAGGTTGCACCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGTCTTTCGCTTTAGATTTg < 2:2206179/100‑1 (MQ=255) ggTGGACATGTTTTTGTTGAAGTAGTAGGTTGCACCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGTCTTTCGCTCTAGATTTg > 1:2522087/1‑100 (MQ=255) gTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGTCTTTCGCTTTAGATTTgg < 1:1945088/100‑1 (MQ=255) gTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGTCTTTCGCTTTAGATTTgg < 2:1794211/100‑1 (MQ=255) gTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGTCTTTCGCTTGAGATTTgg < 2:2489106/100‑1 (MQ=255) gTGGACATGTTTTTGTTGAAGTAGTAGGTTGCACCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGTCTTTCGCTTTAGATTTgg < 2:1268038/100‑1 (MQ=255) gTGGACATGTTTTTGTTGAAGTAGTAGGTTGCACCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGTCTTTCGCTTTAGATTTgg < 2:442709/100‑1 (MQ=255) gTGGACATGTTTTTGTTGAAGTAGTAGGTTGCACCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGTCTTTCGCTTTAGATTTgg < 2:1200551/100‑1 (MQ=255) tGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGTCTTTCGCTTTAGATTTGgt > 1:132723/1‑100 (MQ=255) ggACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGTCTTTCGCTTTAGATTTGgtg < 2:1942202/100‑1 (MQ=255) gACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTGTGCGTCTTTCGCTTTCGATTTGgtgt > 2:2570488/1‑100 (MQ=255) gACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGTCTTTCGCTTTAGATTTGgtgt < 1:2431513/100‑1 (MQ=255) aCATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGTCTTTCGCTTTAGATTTGGTGTa < 2:2575853/100‑1 (MQ=255) aTGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGTCTTTCGCTTTAGATTTGGTGTAAg < 1:1622363/100‑1 (MQ=255) aTGTTTTTGTTGAAGTAGTAGGTTGCACCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGTCTTTCGCTTTAGATTTGGTGTAAg < 2:1308811/100‑1 (MQ=255) tGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGTCTTTCGCTTTAGATTTGGTGTAAGc < 2:1645935/100‑1 (MQ=255) tGTTTTTGTTGAAGTAGTAGGTTGCACCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGTCTTTCGCTTTAGATTTGGTGTAAGc < 2:438724/100‑1 (MQ=255) tGTTTTTGTTGAAGTAGTAGGTTGCACCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGTCTTTCGCTTTAGATTTGGTGTAAGc < 2:2541083/100‑1 (MQ=255) gTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGTCTTTCGCTTTAGATTTGGTGTAAGCg < 2:1982256/100‑1 (MQ=255) gTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGTCTTTCGCTTTAGATTTGGTGTAAGCg < 2:635241/100‑1 (MQ=255) gTTTTTGTTGAAGTAGTAGGTTGCACCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGTCTTTCGCTTTAGATTTGGTGTAAGCg < 2:2149388/100‑1 (MQ=255) gTTTTTGTTGAAGTAGTAGGTTGCACCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGTCTTTCGCTTTAGATTTGGTGTAAGCg < 2:668330/100‑1 (MQ=255) gTTTTTGTTGAAGTAGTAGGTTGCACCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGTCTTTCGCTTTAGATTTGGTGTAAGCg > 1:1234926/1‑100 (MQ=255) gTTTTTGTTGAAGTAGTAGGTTGCACCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTGCTACGTCTTTCGCTTTAGATTTGGTGTAAGCg < 2:2332978/100‑1 (MQ=255) ttttttttAATTATTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGTCTTTCGCTTTAGATTTTGTGTAAGCGAt > 2:2235490/1‑100 (MQ=255) ttttGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGTCTTTCGCTTTAGATTTGGTGTAAGCGAt < 2:1829414/100‑1 (MQ=255) ttttGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGTCTTTCGCTTTAGATTTGGTGTAAGCGAt < 1:50131/100‑1 (MQ=255) tgttgAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGTCTTTCGCTTTAGATTTGGTGTAAGCGATgga > 2:558877/1‑100 (MQ=255) gttgAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGTCTTTCGCTTTAGATTTGGTGTAAGCGATggac > 1:116674/1‑100 (MQ=255) gttgAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGTCTTTCGCTTTAGATTCGGTGTAAGCGATggac > 1:2177003/1‑100 (MQ=255) gttgAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCGTCTACGTCTTTCACTTTAGAGTTGGTGTAAGCGATggac > 1:2473800/1‑100 (MQ=255) ttgAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGTCTTTCGCTTTAGATTTGGTGTAAGCGATggacg < 2:438672/100‑1 (MQ=255) tgAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGTCTTTCGCTTTAGATTTGGTGTAAGCGATggacgg > 2:2375701/1‑100 (MQ=255) tgAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGTCTTTCGCTTTAGATTTGGTGTAAGCGATggacgg > 2:1401044/1‑100 (MQ=255) agGTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGTCTTTCGCTTTAGATTTGGTGTAAGCGATGGACGGACGCAGAcc < 2:1519503/100‑1 (MQ=255) ggTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGTCTTTCGCTTTAGATTTGGTGTAAGCGATGGACGGACGCAGACCg < 2:2405779/100‑1 (MQ=255) ggTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGTCTTTCGCTTTAGATTTGGTGTAAGCGATGGACGGACGCAGACCg < 1:299595/100‑1 (MQ=255) gTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGTCTTTCGCTTTAGATTTGGTGTAAGCGATGGACGGACGCAGACCGa > 1:694540/1‑100 (MQ=255) ttGCGCCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGTCTTTCGCTTTAGATTTGGTGTAAGCGATGGACGGACGCAGACCGaa > 1:1133639/1‑100 (MQ=255) gcCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGTCTTTCGCTTTAGATTTGGTGTAAGCGATGGACGGACGCAGACCGAAATCg > 2:377763/1‑100 (MQ=255) | GGTGTCGTCTGAACCTACGCCCAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGTCTTTCGCTTTAGATTTGGTGTAAGCGATGGACGGACGCAGACCGAAATCG > NC_000913/985924‑986122 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |