| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 986,023 | 0 | G | A | 40.9% | 244.6 / inf | 375 | G320G (GGC→GGT) | ompF | outer membrane porin 1a (Ia;b;F) |
| Reads supporting (aligned to +/- strand): ref base G (115/106); new base A (54/99); total (170/205) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.53e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.66e-01 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 383 total aligned reads displayed.
GGTGTCGTCTGAACCTACGCCCAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGTCTTTCGCTTTAGATTTGGTGTAAGCGATGGACGGACGCAGACCGAAATCG > NC_000913/985924‑986122 | tgtCGTCTGAACCTACGCCCAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGcc < 1:4663452/100‑1 (MQ=255) gtcgtcTGAACCTACGCCCAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGTTTGCAccc > 1:3897305/1‑100 (MQ=255) gtcgtcTGAACCTACGCCCAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGccc > 1:2256657/1‑100 (MQ=255) gtcgtcTGAACCTACGCCCAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCAccc > 1:2624283/1‑100 (MQ=255) cgtcTGAACCTACGCCCAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCAc < 1:3411271/100‑1 (MQ=255) gtcTGAACCTACGCCCAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACt > 1:4137231/1‑100 (MQ=255) gtcTGAACCTACGCCCAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCACCCACt < 2:2859739/100‑1 (MQ=255) cTGAACCTACGCCCAGTTTGTTGTCAGAATCGACCTGGTTGATGATGTAGTCAACATAGGCGACCTTGTTTTTCTCCACGGAGTCGTTTGCGCCCACTTc > 2:4102347/1‑100 (MQ=255) gAACCTACGCCCAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCaa < 1:60760/100‑1 (MQ=255) aCCTACGCCCAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAag < 1:4385709/100‑1 (MQ=255) aCCTACGCCCAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCACCCACTTCAAag < 2:4428978/100‑1 (MQ=255) ccTACGCCCAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCACCCACTTCAAagt < 2:1644219/100‑1 (MQ=255) tACGCCCAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAagtag < 1:972999/100‑1 (MQ=255) tACGCCCAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAagtag < 2:3478808/100‑1 (MQ=255) tACGCCCAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCACCCACTTCAAagtag < 2:3001797/100‑1 (MQ=255) gctcAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTc > 1:2452573/4‑100 (MQ=255) gCCCAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTc < 1:4273485/100‑1 (MQ=255) gCCCAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGGTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTc > 2:5012647/1‑100 (MQ=255) cccAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCACCCACTTCAAAGTAGTTCa > 1:1258847/1‑100 (MQ=255) cccAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCACCCACTTCAAAGTAGTTCa > 1:3589131/1‑100 (MQ=255) cccAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCACCCACTTCAAAGTAGTTCa > 1:1703569/1‑100 (MQ=255) ccAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCACCCACTTCAAAGTAGTTCAc > 1:2037589/1‑100 (MQ=255) ccAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCACCCACTTCAAAGTAGTTCAc < 2:2618262/100‑1 (MQ=255) ccAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCACCCACTTCAAAGTAGTTCAc > 1:2338551/1‑100 (MQ=255) cAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCAcc < 1:3094926/100‑1 (MQ=255) cAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCAcc < 2:3377568/100‑1 (MQ=255) cAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCAcc < 1:1103224/100‑1 (MQ=255) gTTTGTTGTCAGAATCGATCTGGTTGATTATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCACCCACTTCAAAGTAGTTCACCAg < 2:4609582/100‑1 (MQ=255) tgttgtCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATc < 2:1139400/100‑1 (MQ=255) tgttgtCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATc < 1:1425259/100‑1 (MQ=255) ttgtCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCaa < 1:160889/100‑1 (MQ=255) tgtCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCAAc < 1:4973974/100‑1 (MQ=255) tgtCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCAAc < 1:5148138/100‑1 (MQ=255) tgtCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCAAc > 1:2931748/1‑100 (MQ=255) tgtCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCACCCACTTCAAAGTAGTTCACCAGATCAAc < 2:843299/100‑1 (MQ=255) gtCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACa > 1:4821644/1‑100 (MQ=255) gtCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCACCCACTTCAAAGTAGTTCACCAGATCAACa > 1:4200734/1‑100 (MQ=255) gtCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCACCCACTTCAAAGTAGTTCACCAGATCAACa < 2:3292227/100‑1 (MQ=255) cAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACATc > 2:4746479/1‑100 (MQ=255) cAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACATc > 1:1447570/1‑100 (MQ=255) gAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACATCAc < 1:1965883/100‑1 (MQ=255) gAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCACCCACTTCAAAGTAGTTCACCAGATCAACATCAc < 2:2033962/100‑1 (MQ=255) aaTCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACATCAcc < 2:561226/100‑1 (MQ=255) aaTCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCACCCACTTCAAAGTAGTTCACCAGATCAACATCAcc < 2:2529775/100‑1 (MQ=255) aTCGATCTTGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCACCCACTTCAAAGTAGTTCACCAGATCAACATCACCg < 2:1853908/100‑1 (MQ=255) cGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACATCACCGAt > 2:3762062/1‑100 (MQ=255) cGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCACCCACTTCAAAGTAGTTCACCAGATCAACATCACCGAt < 1:4434221/100‑1 (MQ=255) cGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCACCCACTTCAAAGTAGTTCACCAGATCAACATCACCGAt < 2:2242483/100‑1 (MQ=255) cGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCACCCACTTCAAAGTAGTTCACCAGATCAACATCACCGAt < 2:1911908/100‑1 (MQ=255) aTCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATAc < 2:2423958/100‑1 (MQ=255) ggTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTc > 1:118607/1‑100 (MQ=255) ggTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTc < 1:3699094/100‑1 (MQ=255) gTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCt < 2:418333/100‑1 (MQ=255) tgatgaTGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTAc > 2:4320285/1‑100 (MQ=255) tgatgaTGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTAc < 2:119065/100‑1 (MQ=255) tgatgaTGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCACCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTAc < 2:3558515/100‑1 (MQ=255) tgatgaTGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCACCCACTACAAAGTAGTTCACCAGATCAACATCACCGATTCCTTCTAc < 2:4864966/100‑1 (MQ=37) gatgatGTAGTCAACCTAGGTGGACATGTTTCTGTTGAAGTAGTAGTTTGCACTCAAAGCAAAGTCGATCACCAGATCAACATCACCGATACCGTCTACg < 2:4591529/100‑1 (MQ=21) gatgatGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACg > 1:2700189/1‑100 (MQ=255) gatgatGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCACCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACg < 2:1046759/100‑1 (MQ=255) atgatgTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGt > 2:3926150/1‑100 (MQ=255) tgatgTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCCTCAGATCAACATCACCGATACCTTCTACGTc < 2:2464826/100‑1 (MQ=255) tgatgTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGTc > 1:1047376/1‑100 (MQ=255) gatgTAGTCAACATAGGTGGACATGTTTTCGTTGAATTAGTATGTTGCACCCACCTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGTCt < 2:2139289/100‑1 (MQ=37) gatgTAGTCAACATACGTGGACATGTTTTTGTTGAAGTAGTAGGCAGCACCCACTTCAAAGTAGTTCACCAGATCAACTTCACCGATACCTTCTACGTCt < 2:4839758/100‑1 (MQ=25) atgTAGTCAACATAGGTCGACATGTTTTTGTTGAAGTAGTAGGTTGCACCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGTCtt < 2:2720333/100‑1 (MQ=255) gTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGTCTTTc < 2:3407792/100‑1 (MQ=255) gTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGTCTTTc > 1:3063750/1‑100 (MQ=255) aGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGTCTTTCGc > 2:798487/1‑100 (MQ=255) aGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCACCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGTCTTTCGc > 1:3485981/1‑100 (MQ=255) tCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGTCTTTCGCtt < 2:2899026/100‑1 (MQ=255) cAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGTCTTTCGCttt < 1:399854/100‑1 (MQ=255) aCATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCACCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGTCTTTCGCTTTAg < 2:2310833/100‑1 (MQ=255) tAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGTCTTTCGCTTTAGAtt > 1:3207571/1‑100 (MQ=255) ggTGGACATGTTTTTGTTGAAGTAGGAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGTCTTTCGCTTTAGATTTg < 2:2169951/100‑1 (MQ=255) gTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGTCTTTCGCTTTAGATTTgn < 1:4103532/100‑2 (MQ=255) gTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGTCTTTCGCTTTAGATTTgg > 1:825589/1‑100 (MQ=255) gTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGTCTTTCGCTTTAGATTTgg > 1:1027329/1‑100 (MQ=255) gTGGACATGTTTTTGTTGAAGTAGTAGGTTGCACCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGTCTTTCGCTTTAGATTTgg > 1:2152945/1‑100 (MQ=255) tGGACATGTTTTTGTTGAAGTAGTAGGTTGCACCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGTCTTTCGCTTTAGATTTGgt < 2:4272999/100‑1 (MQ=255) aTGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGTCTTTCGCTTTAGATTTGGTGTAAg < 1:4566343/100‑1 (MQ=255) aTGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGTCTTTCGCTTTAGATTTGGTGTAAg < 2:669850/100‑1 (MQ=255) aTGTTTTTGTTGAAGTAGTAGGTTGCACCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGTCTTTCGCTTTAGATTTGGTGTAAg < 2:2948999/100‑1 (MQ=255) aTGTTTTTGTTGAAGTAGTAGGTTGCACCCACTTCAAAGTAGTTCACCAGATCAACATCAACGATACCTTCTACGTCTTTCGCTTTAGATTTGGTGTAAg < 2:3909063/100‑1 (MQ=255) tGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGTCTTTCGCTTTAGATTTGGTGTAAGc < 2:1564380/100‑1 (MQ=255) tGTTTTTGTTGAAGTAGTAGGTTGCACCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGTCTTTCGCTTTAGATTTGGTGTAAGc < 2:4012814/100‑1 (MQ=255) tGTCTTTGTTGAAGTAGTAGGTTGCGGCCTCTTCAAAATAGTTCACCACATCAACATCACCGTTACCTGCTACATCTTGCGCTTTAGATTTGGTGTAAGc < 2:1592379/100‑1 (MQ=255) gTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGTCTTTCGCTTTAGATTTGGTGTAAGCg > 1:707995/1‑100 (MQ=255) gTTTTTGTTGAAGTAGTAGGTTGCACCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGTCTTTCGCTTTAGATTTGGTGTAAGCg > 1:1870788/1‑100 (MQ=255) tttGTTGAAGTAGTAGGTTGCACCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGTCTTTCGCTTTAGATTTGGTGTAAGCGATg < 2:1998028/100‑1 (MQ=255) tgttgAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGTCTTTCGCTTTAGATTTGGTGTAAGCGATgga > 1:4774882/1‑100 (MQ=255) gttgAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGTCTTTCGCTTTAGATTTGGTGTAAGCGATggac > 1:4521531/1‑100 (MQ=255) gttgAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTACTACGTCTTTCGCTTTAGATTTGGTGTAAGCGATggac > 1:778558/1‑100 (MQ=255) aaGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGTCTTTCGCTTTAGATTTGGTGTAAGCGATggacggac < 2:2367146/100‑1 (MQ=255) gtagtaGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGTCTTTCGCTTTAGATTTGGTGTAAGCGATGGACGGACGc > 2:3699849/1‑100 (MQ=255) agtagGTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGTCTTTCGCTTTAGATTTGGTGTAAGCGATGGACGGACGCAg > 2:3214116/1‑100 (MQ=255) agGTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGTCTTTCGCTTTAGATTTGGTGTAAGCGATGGACGGACGCAGAcc > 2:1291277/1‑100 (MQ=255) agGTTACGCCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGTCTTTCGCTTTAGATTTGGTGTAAGCGATGGACGGACGCAGAcc > 1:4904055/1‑100 (MQ=255) gTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGTCTTTCGCTTTAGATTTGGTGTAAGCGATGGACGGACGCAGACCGa < 2:2078938/100‑1 (MQ=255) gTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGTCTTTCGCTTTAGATTTGGTGTAAGCGATGGACGGACGCAGACCGa > 1:2320820/1‑100 (MQ=255) | GGTGTCGTCTGAACCTACGCCCAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGTCTTTCGCTTTAGATTTGGTGTAAGCGATGGACGGACGCAGACCGAAATCG > NC_000913/985924‑986122 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |