| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,744,981 | 0 | T | C | 39.6% | 119.2 / 197.7 | 177 | T383A (ACC→GCC) | ydhQ | autotransporter adhesin‑related protein |
| Reads supporting (aligned to +/- strand): ref base T (52/55); new base C (36/34); total (88/89) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.60e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.56e-01 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 183 total aligned reads displayed.
GGAGCGTTGCGCCAATCCCGTCTTCGTCTGGCTGTAATTTCAGAGCGTTACACAGAGTTTGCCGACTGGCATCTGTTATCTCAACGTGTATATCCCCGGTAACTTCCCCTTTCACATTGATGAAGTCAGGTGAAATTTCTTTTGCACTGGTTTGCAGGCAAATCGCTCCCTCTCCGCGCAGGCGTTTCACTTTCAGTTG > NC_000913/1744882‑1745080 | ggAGCGTTGCGCCAATCCCGTCTTCGTCTGGCTGTAATTTCAGAGCGTTACACAGAGTTTGCCGACTGGCATCTGTTATCTCAACGTGTATATCCCCGGt > 1:1879603/1‑100 (MQ=255) caGCGCTGCGCCAGTCCCGTCTTCGTCTGGCTGTAATTTCAGAGCGTTACACAGAGTTTGCCGACTGGCATCTGTTATCTCAACGTGTATATCCCCGGTa < 2:4730072/99‑1 (MQ=255) gCGTTGCGCCAATCCCGTCTTCGTCTGGCTGTAATTTCAGAGCGTTACACAGAGTTTGCCGACTGGCATCTGTTATCTCAACGTGTATATCCCCGGTAAc < 2:2354093/100‑1 (MQ=255) cGTTGCGCCAATCCCGTCTTCGTCTGGCTGTAATTTCAGAGCGTTACACAGAGTTTGCCGACTGGCATCTGTTATCTCAACGTGTATATCCCCGGTAACt < 2:1122192/100‑1 (MQ=255) tGCGCCAATCCCGTCTTCGTCTGGCTGTAATTTCAGAGCGTTACACAGAGTTTGCCGACTGGCATCTGTTATCTCAACGTGTATATCCCCGGCAACTTcc > 2:3865388/1‑100 (MQ=255) tGCGCCAATCCCGTCTTCGTCTGGCTGTAATTTCAGAGCGTTACACAGAGTTTGCCGACTGGCATCTGTTATCTCAACGTGTATATCCCCGGCAACTTcc > 1:1968097/1‑100 (MQ=255) gcCAATCCCGTCTTCGTCTGGCTGTAATTTCAGAGCGTTACACAGAGTTTGCCGACTGGCATCTGTTATCTCAACGTGTATATCCCCGGTAACTTCCCCt < 1:2495310/100‑1 (MQ=255) gcCAATCCCGTCTTCGTCTGGCTGTAATTTCAGAGCGTTACACAGAGTTTGCCGACTGGCATCTGTTATCTCAACGTGTATATCCCCGGTAACTTCCCCt < 1:1495985/100‑1 (MQ=255) gcCAATCCCGTCTTCGTCTGGCTGTAATTTCAGAGCGTTACACAGAGTTTGCCGACTGGCATCTGTTATCTCAACGTGTATATCCCCGGTAACTTCCCCt > 1:37330/1‑100 (MQ=255) gcCAATCCCGTCTTCGTCTGGCTGTAATTTCAGAGCGTTACACAGAGTTTGCCGACTGGCATCTGTTATCTCAACGTGTATATCCCCGGTAACTTCCCCt > 1:1772609/1‑100 (MQ=255) ccAATCCCGTCTTCGTCTGGCTGTAATTTCAGAGCGTTACACAGAGTTTGCCGACTGGCATCTGTTATCTCAACGTGTATATCCCCGGTAACTTCCCCtt < 1:2294187/100‑1 (MQ=255) aaTCCCGTCTTCGTCTGGCTGTAATTTCAGAGCGTTACACAGAGTTTGCCGACTGGCATCTGTTATCTCAACGTGTATATCCCCGGCAACTTCCCCTTTc < 1:932634/100‑1 (MQ=255) aaTCCCGTCTTCGTCTGGCTGTAATTTCAGAGCGTTACACAGAGTTTGCCGACTGGCATCTGTTATCTCAACGTGTATATCCCCGGCAACTTCCCCTTTc < 1:3468390/100‑1 (MQ=255) aTCCCGTCTTCGTCTGGCTGTAATTTCAGAGCGTTACACAGAGTTTGCCGACTGGCATCTGTTATCTCAACGTGTATATCCCCGGTAACTTCCCCTTTca < 2:1737745/100‑1 (MQ=255) cccGTCTTCGTCTGGCTGTAATTTCAGAGCGTTACACAGAGTTTGCCGACTGGCATCTGTTATCTCAACGTGTATATCCCCGGTAACTTCCCCTTTcacn < 1:2186597/100‑2 (MQ=255) ccGTCTTCGTCTGGCTGTAATTTCAGAGCGTTACACAGAGTTTGCCGACTGGCATCTGTTATCTCAACGTGTATATCCCCGGCAACTTCCCCTTTCACAt > 2:4367925/1‑100 (MQ=255) cGTCTTCGTCTGGCTGTAATTTCAGAGCGTTACACAGAGTTTGCCGACTGGCATCTGTTATCTCAACGTGTATATCCCCGGTAACTTCCCCTTTCACAtt < 2:2391124/100‑1 (MQ=255) cGTCTTCGTCTGGCTGTAATTTCAGAGCGTTACACAGAGTTTGCCGACTGGCATCTGTTATCTCAACGTGTATATCCCCGGTAACTTCCCCTTTCACAtt < 1:3676376/100‑1 (MQ=255) cGTCTTCGTCTGGCTGTAATTTCAGAGCGTTACACAGAGTTTGCCGACTGGCATCTGTTATCTCAACGTGTATATCCCCGGCAACTTCCCCTTTCACAtt > 1:1410962/1‑100 (MQ=255) cGTCTTCGTCTGGCTGTAATTTCAGAGCGTTACACAGAGTTTGCCGACTAGCATCTGTTATCTCAACGTGTATATCCCCGGTAACTTCCCCTTTCACAtt < 2:4998684/100‑1 (MQ=255) gTCTTCGTCTGGCTGTAATTTCAGAGCGTTACACAGAGTTTGCCGACTGGCATCTGTTATCTCAACGTGTATATCCCCGGCAACTTCCCCTTTCACATtg < 1:3933622/100‑1 (MQ=255) tCTTCGTCTGGCTGTAATTTCAGAGCGTTACACAGAGTTTGCCGACTGGCATCTGTTATCTCAACGTGTATATCCCCGGTAACTTCCCCTTTCACATtga < 2:1025204/100‑1 (MQ=255) tCGTCTGGCTGTAATTTCAGAGCGTTACACAGAGTTTGCCGACTGGCATCTGTTTTCTCACCGTGTATATCCCCGGTAACTTCCCCTTTCACATtgatga < 2:3911522/100‑1 (MQ=255) tCGTCTGGCTGTAATTTCAGAGCGTTACACAGAGTTTGCCGACTGGCATCTGTTATCTCAACGTGTATATCCCCGGCAACTTCCCCTTTCACATtgatgn < 1:4122247/100‑2 (MQ=255) tCGTCTGGCTGTAATTTCAGAGCGTTACACAGAGTTTGCCGACTGGCATCTGTTATCGCAACGTGTATATCCCCGGTAACTGCCCCTTTCACATtgatga < 2:4381355/100‑1 (MQ=255) gTCTGGCTGTAATTTCAGAGCGTTACACAGAGTTTGCCGACTGGCATCTGTTATCTCAACGTGTATATCCCCGGTAACTTCCCCTTTCACATTGATGAAg > 1:1986824/1‑100 (MQ=255) gTCTGGCTGTAATTTCAGAGCGTTACACAGAGTTTGCCGACTGGCATCTGTTATCTCAACGTGTATATCCCCGGTAACTTCCCCTTTCACATTGATGAAg < 1:5053859/100‑1 (MQ=255) ggCTGTAATTTCAGAGCGTTACACAGAGTTTGCCGACTGGCATCTGTTATCTCAACGTGTATATCCCCGGTAACTTCCCCTTTCACATTGATGAAGTCAg > 1:804905/1‑100 (MQ=255) ggCTGTAATTTCAGAGCGTTACACAGAGTTTGCCGACTGGCATCTGTTATCTCAACGTGTATATCCCCGGCAACTTCCCCTTTCACATTGATGAAGTCAg < 1:3580497/100‑1 (MQ=255) cTGTAATTTCAGAGCGTTACACAGAGTTTGCCGACTGGCATCTGTTATCTCAACGTGTATATCCCCGGTAACTTCCCCTTTCACATTGATGAAGTCAGGt > 2:1984672/1‑100 (MQ=255) cTGTAATTTCAGAGCGTTACACAGAGTTTGCCGACTGGCATCTGTTATCTCAACGTGTATATCCCCGGCAACTTCCCCTTTCACATTGATGAAGTCAGGt > 2:706503/1‑100 (MQ=255) gTAATTTCAGAGCGTTACACAGAGTTTGCCGACTGGCATCTGTTATCTCAACGTGTATATCCCCGGTAACTTCCCCTTTCACATTGATGAAGTCAGGTGa > 1:2242470/1‑100 (MQ=255) gTAATTTCAGAGCGTTACACAGAGTATGCCGACTGGCATCTGTTATCTCAACGTGTATATCCCCGGTAACTTCCCCTTTCACCTTGATGAAGTCAGGTGa > 2:4045990/1‑100 (MQ=255) aaTTTCAGAGTGTTACACAGAGTTTGCCGACTGGCATCTGTTATCTCAACGTGTATATCCCCGGTAACTTCCCCTTTCACATTGATGAAGTCAGGTGaaa > 2:355041/1‑100 (MQ=255) aaTTTCAGAGCGTTACACAGAGTTTGCCGCCTGGCATCTGTTATCTAAAAGTGTATATCCCCGGCAACTTCCCCTTTCACATTCATGAAGTCAGGTGaac > 2:4452669/1‑99 (MQ=255) aaTTTCAGAGCGTTACACAGAGTTTGCCGACTGGCATCTGTTATCTCAACGTGTATATCCCCGGCAACTTCCCCTTTCACATTGATGAAGTCAGGTGaaa > 2:2468167/1‑100 (MQ=255) aTTTCAGAGCGTTACACAGAGTTTGCCGACTGGCATCTGTTATCTCAACGTGTATATCCCCGGCAACTTCCCCTTTCACATTGATGAAGTCAGGTGAAAt > 1:1952807/1‑100 (MQ=255) tCAGAGCGTTACACAGAGTTTGCCGACTGGCATCTGTTATCTCAACGTGTATATCCCCGGCAACTTCCCCTTTCACATTGATGAAGTCAGGTGAAATTTc < 1:459359/100‑1 (MQ=255) cAGAGCGTTACACAGAGTTTGCCGACTGGCATCTGTTATCTCAACGTGTATATCCCCGGTAACTTCCCCTTTCACATTGATGAAGTCAGGTGAAATTTCt < 1:1660919/100‑1 (MQ=255) cAGAGCGTTACACAGAGTTTGCCGACTGGCATCTGTTATCTCAACGTGTATATCCCCGGTAACTACCCCTTTCACATTGATGAAGTCAGGTGAAATTTCt > 2:4292367/1‑100 (MQ=255) gagCGTTACACAGAGTTTGCCGACTGGCATCTGTTATCTCAACGTGTATATCCCCGGTAACTTCCCCTTTCACATTGATGAAGTCAGGTGAAATTTCttt < 2:1350459/100‑1 (MQ=255) gCGTTACACAGAGTTTGCCGACTGTCATCGGTTATCTCAACGTGTATATCCCCGGTAACTTCCCCTTTCACATTGATGAAGTCAGGTGAAATTTCTTTTg > 1:4810758/1‑100 (MQ=255) gCGTTACACAGAGTTTGCCGACTGGCATCTGTTATCTCAACGTGTATATCCCCGGTAACTTCCCCTTTCACATTGATGAAGTCAGGTGAAATTTCTTTTg < 1:4372261/100‑1 (MQ=255) ttACACAGAGTTTGCCGACTGGCATCTGTTATCTCAACGTGTATATCCCCGGTAACTTCCCCTTTCACATTGATGAAGTCAGGTGAAATTTCTTTTGCAc < 2:2822710/100‑1 (MQ=255) cacaGAGTTTGCCGACTGGCATCTGTTATCTCAACGTGTATATCCCCGGTAACTTCCCCTTTCACATTGATGAAGTCAGGTGAAATTTCTTTTGCACTgg < 2:3781066/100‑1 (MQ=255) cacaGAGTTTGCCGACTGGCATCTGTTATCTCAACGTGTATATCCCCGGTAACTTCCCCTTTCACATTGATGAAGTCAGGTGAAATTTCTTTTGCACTgg > 1:2097046/1‑100 (MQ=255) acaGAGTTTGCCGACTGGCATCTGTTATCTCAACGTGTATATCCCCGGCAACTTCCCCTTTCACATTGATGAAGTCAGGTGAAATTTCTTTTGCACTGGt < 1:392002/100‑1 (MQ=255) caGAGTTTGCCGACTGGCATCTGTTATCTCAACGTGTATATCCCCGGTAACTTCCCCTTTCACATTGATGAAGTCAGGTGAAATTTCTTTTGCACTGGtt > 2:3150085/1‑100 (MQ=255) caGAGTTTGCCGACTGGCATCTGTTATCTCAACGTGTATATCCCCGGTAACTTCCCCTTTCACATTGATGAAGTCAGGTGAAATTTCTTTTGCACTGGtt < 2:2215668/100‑1 (MQ=255) caGAGTTTGCCGACTGGCATCTGTTATCTCAACGTGTATATCCCCGGCAACTTCCCCTTTCACATTGATGAAGTCAGGTGAAATTTCTTTTGCACTGGtt > 1:3856229/1‑100 (MQ=255) agagTTTGCCGACTGGCATCTGTTATCTCAACGTGTATATCCCCGGTAACTTCCCCTTTCACATTGATGAAGTCAGGTGAAATTTCTTTTGCACTGGttt > 1:2481786/1‑100 (MQ=255) gagTTTGCCGACTGGCATCTGTTATCTCAACGTGTATATCCCCGGCAACTTCCCCTTTCACATTGATGAAGTCAGGTGAAATTTCTTTTGCACTGGTTTg < 2:3466096/100‑1 (MQ=255) agTTTGCCGACTGGCATCTGTTATCTCAACGTGTATATCCCCGGTAACTTCCCCTTTCACATTGATGAAGTCAGGTGAAATTTCTTTTGCACTGGTTTGc < 1:3019362/100‑1 (MQ=255) agTTTGCCGACTGGCATCTGTTATCTCAACGTGTATATCCCCGGCAACTTCCCCTTTCACATTGATGAAGTCAGGTGAAATTTCTTTTGCACTGGTTTGc > 2:1576406/1‑100 (MQ=255) gTTTGCCCAATGGCATCTGTTATCTCAACATGTATATCCCCGGTAACTTCCCCTTTAACATTGATGAAGTCAGGTGAAATTTCTTTTGCACTGGTTTGCa > 2:4196019/1‑100 (MQ=255) tttGCCGACTGGCATCTGTTATCTCAACGTGTATATCCCCGGTAACTTCCCCTTTCACATTGATGAAGTCAGGTGAAATTTCTTTTGCACTGGTTTGCAg < 1:1046042/100‑1 (MQ=255) tttGCCGACTGGCATCTGTTATCTCAACGTGTATATCCCCGGCAACTTCCCCTTTCACATTGATGAAGTCAGGTGAAATTTCTTTTGCACTGGTTTGCAg < 2:525125/100‑1 (MQ=255) ccGACTGGCATCTGTTATCTCAACGTGTATATCCCCCGTAACTTCCCCTTTCACATTGATGAAGTCAGGTGAAATTTCTTTTGCACTGGTTTGCAGGCaa > 2:3593061/1‑100 (MQ=255) cGACTGGCATCTGTTATCTCAACGTGTATATCCCCGGCAACTTCCCCTTTCACATTGATGAAGTCAGGTGAAATTTCTTTTGCACTGGTTTGCAGGCaaa > 2:2249340/1‑100 (MQ=255) aCTGGCATCTGTTATCTCAACGTGTATATCCCCGGCAACTTCCCCTTTCACATTGATGAAGTCAGGTGAAATTTCTTTTGCACTCGTTTGCAGGCAAATc > 1:4770779/1‑100 (MQ=255) cTGGCATCTGTTATCTCAACGTGTATATCCCCGGTAACTTCCCCTTTCACATTGATGAAGTCAGGTGAAATTTCTTTTGCACTGGTTTGCAGGCAAATCg > 2:2087424/1‑100 (MQ=255) tGGCATCTGTTATCTCAACGTGTATATCCCCGGTAACTTCCCCTTTCACATTGATGAAGTCAGGTGAAATTTCTTTTGCACTGGTTTGCAGGCAAATCGc < 2:1674363/100‑1 (MQ=255) ggCATCTGTTATCTCAACGTGTATATCCCCGGCAACTTCCCCTTTCACATTGATGAAGTCAGGTGAAATTTCTTTTGCACTGGTTTGCAGGCAAATCGCt > 1:592636/1‑100 (MQ=255) gCATCTGTTATCTCAACGTGTATATCCCCGGTAACTTCCCCTTTCACATTGATGAAGTCAGGTGAAATTTCTTTTGCACTGGTTTGCAGGCAAATCGCTc > 1:2159460/1‑100 (MQ=255) gCATCTGTTATCTCAACGTGTATATCCCCGGCAACTTCCCCTTTCACATTGATGAAGTCAGGTGAAATTTCTTTTGCACTGGTTTGCAGGCAAATCGCTc < 1:1217265/100‑1 (MQ=255) cATCTGTTATCTCAACGTGTATATCCGCGGTAACTTCCCCATTCCCATTGATGAAGTCAGGTGAAATTTCTTTTGCACTGGTTTGCAGGCAAATCGCTcc > 2:383429/1‑100 (MQ=255) cATCTGTTATCTCAACGTGTATATCCCCGGCAACTTCCCCTTTCACATTGATGAAGTCAGGTGAAATTTCTTTTGCACTGGTTTGCAGGCAAATCGCTcc < 1:3303034/100‑1 (MQ=255) cATCTGTTATCTCAACGTGTATATCCCCCGCAACTTCCCCTTTCACATTGATGAAGTCAGGTGAAATTTCTTTTGCACTGGTTTGCAGGCAAATCGCTcc < 2:1454587/100‑1 (MQ=255) tCTGTTATCTCAACGTGTATATCCCCGGCAACTTCCCCTTTCACATTGATGAAGTCAGGTGAAATTTCTTTTGCACTGGTTTGCAGGCAAATCGCTCCct > 2:1296969/1‑100 (MQ=255) tCTGTTATCTCAACGTGTATATCCCCGGCAACTTCCCCTTTCACATTGATGAAGTCAGGTGAAATTTCTTTTGCACTGGTTTGCAGGCAAATCGCTCCct > 2:1038975/1‑100 (MQ=255) tGTTATCTCAACGTGTATATCCCCGGTAACTTCCCCTTTCACATTGATGAAGTCAGGTGAAATTTCTTTTGCACTGGTTTGCAGGCAAATCGCTCCctct > 2:2607791/1‑100 (MQ=255) tGTTATCTCAACGTGTATATCCCCGGCAACTTCCCCTTTCACATTGATGAAGTCAGGTGAAATTTCTTTTGCACTGGTTTGCAGGCAAATCGCTCCctct < 2:1928207/100‑1 (MQ=255) gTTATCTCAACGTGTATATCCCCGGTAACTTCCCCTTTCACATTGATGAAGTCAGGTGAAATTTCTTTTGCACTGGTTTGCAGGCAAATCGCTCCCtctc > 2:4928599/1‑100 (MQ=255) tctcAACGTGTATATCCCCGGTAACTTCCCCTTTCACATTGATGAAGTCAGGTGAAATTTCTTTTGCACTGGTTTGCAGGCAAATCGCTCCCTCTCcgcg > 1:4195543/1‑100 (MQ=255) tcAACGTGTATATCCCCGGTAACTTCCCCTTTCACATTGATGAAGTCAGGTGAAATTTCTTTTGCACTGGTTTGCAGGCAAATCGCTCCCTCTCCGCGCa > 2:1869510/1‑100 (MQ=255) tcAACGTGTATATCCCCGGCAACTTCCCCTTTCACATTGATGAAGTCAGGTGAAATTTCTTTTGCACTGGTTTGCAGGCAAATCGCTCCCTCTCCGCGCa < 2:3814659/100‑1 (MQ=255) cAACGTGTATATCCCCGGTAACTTCCCCTTTCACATTGATGAAGTCAGGTGAAATTTCTTTTGCACTGGTTTGCAGGCAAATCGCTCCCTCTCCGCGCAg > 2:2017220/1‑100 (MQ=255) cAACGTGTATATCCCCGGCAACTTCCCCTTTCACATTGATGAAGTCAGGTGAAATTTCTTTTGCACTGGTTTGCAGGCAAATCGCTCCCTCTCCGCGCAg > 2:953760/1‑100 (MQ=255) aaCGTGTATATCCCCGGTAACTTCCCCTTTCACATTGATGAAGTCAGGTGAAATTTCTTTTGCACTGGTTTGCAGGCAAATCGCTCCCTCTCCGCGCAgg > 1:3026808/1‑100 (MQ=255) aCGTGTATATCCCCGGTAACTTCCCCTTTCACATTGATGAAGTCAGGTGAAATTTCTTTTGCACTGGTTTGCAGGCAAATCGCTCCCTCTCCGCGCAGGc < 2:4402722/100‑1 (MQ=255) cGTGTATATCCCCGGCAACTTCCCCTTTCACATTGATGAAGTCAGGTGAAATTTCTTTTGCACTGGTTTGCAGGCAAATCGCTCCCTCTCCGCGCAGGCg < 1:1103675/100‑1 (MQ=255) cGTGTATATCCCCGGCAACTTCCCCTTTCACATTGATGAAGTCAGGTGAAATTTCTTTTGCACTGGTTTGCAGGCAAATCGCTCCCTCTCCGCGCAGGCg > 1:3847294/1‑100 (MQ=255) gtgtATATCCCCGGTAACTTCCCCTTTCACATTGATGAAGTCAGGTGAAATTTCTTTTGCACTGGTTTTCAGGCAAATCGCTCCCTCTCCGCGCAGGCGt > 2:5080994/1‑100 (MQ=255) gtgtATATCCCCGGCAACTTCCCCTTTCACATTGATGAAGTCAGGTGAAATTTCTTTTGCACTGGTTTGCAGGCAAATCGCTCCCTCTCCGCGCAGGCGt < 2:3421247/100‑1 (MQ=255) tgtATATCCCCGGTAACTTCCCCTTTCACATTGATGAAGTCAGGTGAAATTTCTTTTGCACTGGTTTGCAGGCAAATCGCTCCCTCTCCGCGCAGGCGtt > 2:832304/1‑100 (MQ=255) tgtATATCCCCGGTAACTTCCCCTTTCACATTGATGAAGTCAGGTGAAATTTCTTTTGCACTGGTTTGCAGGCAAATCGCTCCCTCTCCGCGCAGGCGtt < 2:36892/100‑1 (MQ=255) tataTCCCCGGTAACTTCCCCTTTCACATTGATGAAGTCAGGTGAAATTTCTTTTGCACTGGTTTGCAGGCAAATCGCTCCCTCTCCGCGCAGGCGTTTc > 2:3565471/1‑100 (MQ=255) tatCCCCGGCAACTTCCCCTTCCACATTGATGAAGTAAGGTGAAATTTCTTTTGCACTGGTTTGCAGGCAAATCGCTCCCCCTCCGCGAAGGCGTTTCAc < 2:3058641/100‑1 (MQ=255) gatCTCCGGCAACTTCCCCTTTCACATTGATGAAGTCAGGTGAAATTTCTTTTGCACTGGTTTGCAGGCAAATCGCTCCCTCTCCGCGCAGGCGTTTCAc < 1:1533161/99‑1 (MQ=255) tCCCCGGTAACTTCCCCTTTCACATTGATGAAGTCAGGTGAAATTTCTTTTGCACTGGTTTGCAGGCAAATCGCTCCCTCTCCGCGCAGGCGTTTCACtt < 1:3652778/100‑1 (MQ=255) ccccGGCAACTTCCCCTTTCACATTGATGAAGTCAGGTGAAATTTCTTTTGCACTGGTTTGCAGGCAAATCGCTCCCTCTCCGCGCAGGCGTTTCACttt < 1:1379507/100‑1 (MQ=255) ccccGGCAACTTCCCCTTTCACATTGATGAAGTCAGGTGAAATTTCTTTTGCACTGGTTTGCAGGCAAATCGCTCCCTCTCCGCGCAGGCGTTTCACttt < 2:1411196/100‑1 (MQ=255) cccGGTAACTTCCCCTTTCACATTGATGAAGTCAGGTGAAATTTCTTTTGCACTGGTTTGCAGGCAAATCGCTCCCTCTCCGCGCAGGCGTTTCACTTTc > 2:4324649/1‑100 (MQ=255) cccGGTAACTTCCCCTTTCACATTGATGAAGTCAGGTGAAATTTCTTTTGCACTGGTTTGCAGGCAAATCGCTCCCTCTCCGCGCAGGCGTTTCACTTTc < 1:1328738/100‑1 (MQ=255) ccGGTAACTTCCCCTTTCACATTGATGAAGTCAGGTGAAATTTCTTTTGCACTGGTTTGCAGGCAAATCGCTCCCTCTCCGCGCAGGCGTTTCTCTTTCa > 1:3709620/1‑100 (MQ=255) ccGGCACCTTCCCCTTTCACCTTGATGAAGTCAGGTGAAATTTCTTTTGCACTGGTTTGCAGGCAAATCGCTCCCTCTCCGCGCAGGCGTTTCACTTTCa < 1:2825733/100‑1 (MQ=255) cGGTAACTTCCCCTTTCACATTGATGAAGTCAGGTGAAATTTCTTTTGCACTGGTTTGCAGGCAAATCGCTCCCTCTCCGCGCAGGCGTTTCACTTTCAg < 1:3590047/100‑1 (MQ=255) cGGTAACTTCCCCTTTCACATTGATGAAGTCAGGTGAAATTTCTTTTGCACTGGTTTGCAGGCAAATCGCTCCCTCTCCGCGCAGGCGTTTCACTTTCAg > 1:1598488/1‑100 (MQ=255) cGGTAACTTCCCCTTTCACATTGATGAAGTCAGGTGAAATTTCTTTTGCACTGGTTTGCAGGCAAATCGCTCCCTCTCCGCGCAGGCGTTTCACTTTCAg < 2:2789868/100‑1 (MQ=255) cGGCAACTTCCCCTTTCACATTGATGAAGTCAGGTGAAATTTCTTTTGCACTGGTTTGCAGGCAAATCGCTCCCTCTCCGCGCAGGCGTTTCCCTTTCAg > 2:3605491/1‑100 (MQ=255) | GGAGCGTTGCGCCAATCCCGTCTTCGTCTGGCTGTAATTTCAGAGCGTTACACAGAGTTTGCCGACTGGCATCTGTTATCTCAACGTGTATATCCCCGGTAACTTCCCCTTTCACATTGATGAAGTCAGGTGAAATTTCTTTTGCACTGGTTTGCAGGCAAATCGCTCCCTCTCCGCGCAGGCGTTTCACTTTCAGTTG > NC_000913/1744882‑1745080 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |