| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,755,880 | 0 | G | A | 54.3% | 479.9 / inf | 1407 | intergenic (+502/‑279) | smpB/intA | tmRNA‑binding trans‑translation protein/CP4‑57 prophage; integrase |
| Reads supporting (aligned to +/- strand): ref base G (161/481); new base A (108/654); total (269/1138) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.90e-07 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 1418 total aligned reads displayed.
CAAAAGAGATCGCGTGGAAGCCCTGCCTGGGGTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATGTAAAGACTGACTAAGCATGTAGTACCGAGGATGTAGGAATTTCGGACGCGGGTTCAACTCCCGCCAGCTCCACCAAAATTCTCCATCGGTGATTACCAG > NC_000913/2755781‑2755979 | gaaaaGAGATCTCCGGGAAGCCCTGCCTGGGGGGGAAGCGGGAAAACTTAATCAGGCTAGTTGGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATg > 2:1265657/2‑100 (MQ=255) gagaTCGCGTGGAAGCCCTGCCTGGGGTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATGTAAAg < 1:117940/100‑1 (MQ=255) gagaTCGCGTGGAAGCCCTGCCTGGGGTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATATAAAg > 2:256432/1‑100 (MQ=255) gaTCGCGTGGAAGCCCTGCCTGGGGTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATGTAAAgac < 2:3087989/100‑1 (MQ=255) aacgcgTGGAAGCCCTGCCTGGGGTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATATAAAgact > 2:3788280/3‑100 (MQ=255) aTCGCGTGGAAGCCCTGCCTGGGGTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATGTAAAgact < 1:1003788/100‑1 (MQ=255) cgcgTGGAAGCCCTGCCTGGGGTTGAAGCGTTAAAAGTTAATCAGGCTAGTTTGATAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATATAAAgactga > 2:4770083/1‑100 (MQ=255) cgTGGAAGCCCTGCCTGGGGTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATGTAAAgactgact > 2:4256065/1‑100 (MQ=255) cgTGGAAGCCCTGCCTGGGGTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATATAAAgactgact > 2:5064903/1‑100 (MQ=255) cgTGGAAGCCCTGCCTGGGGTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATATAAAgactgact > 2:142029/1‑100 (MQ=255) gTGGAAGCCCTGCCTGGGGTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATGTAAAGACTGACTa > 2:4027870/1‑100 (MQ=255) aGCCCTGCCTGGGGTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAAGATAAAGACTGACTAAGCAt > 2:4535596/1‑100 (MQ=255) cccTGCCTGGGGTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATGTAAAGACTGACTAAGCATgt < 1:1475912/100‑1 (MQ=255) cccTGCCTGGGGTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATGTAAAGACTGACTAAGCATgt < 2:3340755/100‑1 (MQ=255) cccTGCCCGGGGTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCACGCGAATGTAAAGACTGACTACGCATgt > 1:1587669/1‑100 (MQ=255) cctgcctgGGGTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATGTAAAGACTGACTAAGCATgta < 1:376373/100‑1 (MQ=255) ctgcctgGGGTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATGTAAAGACTGACTAAGCATgtag < 1:3185677/100‑1 (MQ=255) ctgcctgGGGTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATATAAAGACTGACTAAGCATgtag > 2:1985200/1‑100 (MQ=255) tgcctgGGGTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATGTAAAGACTGACTAAGCATgtagt < 1:215270/100‑1 (MQ=255) cctgGGGTTGAAGCGTTAAAACTCAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATGTAAAGACTGACTAAGCATGTAGTAc < 1:4008134/100‑1 (MQ=255) ctgGGGTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATATAAAGACTGACTAAGCATGTAGTAcc > 2:1832729/1‑100 (MQ=255) tgGGGTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATGTAAAGACTGACTAAGCATGTAGTACCg < 1:1631390/100‑1 (MQ=255) tgGGGTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATATAAAGACTGACTAAGCATGTAGTACCg < 1:3948117/100‑1 (MQ=255) tgGGGTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATATAAAGACTGACTAAGCATGTAGTACCg > 2:2142210/1‑100 (MQ=255) gggTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATGTAAAGGCTGACTAAGCATGTAGTACCGAg < 1:942609/100‑1 (MQ=255) gggTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATGTAAAGACTGACTAAGCATGTAGTACCGAg < 1:243149/100‑1 (MQ=255) gggTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATGTAAAGACTGACTAAGCATGTAGTACCGAg < 1:1235595/100‑1 (MQ=255) gggTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATGTAAAGACTGACTAAGCATGTAGTACCGAg < 1:2009103/100‑1 (MQ=255) gggTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATGTAAAGACTGACTAAGCATGTAGTACCGAg < 1:717695/100‑1 (MQ=255) gggTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATATAAAGACTGACTAAGCATGTAGTACCGAg < 1:3705167/100‑1 (MQ=255) gggTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATATAAAGACTGACTAAGCATGTAGTACCGAg < 1:4964795/100‑1 (MQ=255) gggTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATATAAAGACTGACTAAGCATGTAGTACCGAg < 1:3623027/100‑1 (MQ=255) gggTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATATAAAGACTGACTAAGCATGTAGTACCGAg < 1:2367986/100‑1 (MQ=255) gggTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATATAAAGACTGACTAAGCATGTAGTACCGAg < 1:195545/100‑1 (MQ=255) gggTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATATAAAGACTGACTAAGCATGTAGTACCGAg < 1:3280668/100‑1 (MQ=255) gggTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATATAAAGACTGACTAAGCATGTAGTACCGAg < 1:1527410/100‑1 (MQ=255) gggTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATATAAAGACTGACTAAGCATGTAGTACCGAg < 1:4699868/100‑1 (MQ=255) gggTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATATAAAGACTGACTAAGCATGTAGTACCGAg < 1:3103668/100‑1 (MQ=255) gggTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATATAAAGACTGACTAAGCATGTAGTACCGAg < 1:3059773/100‑1 (MQ=255) gggTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATATAAAGACTGACTAAGCATGTAGTACCGAg < 1:4260997/100‑1 (MQ=255) gggTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATATAAAGACTGACTAAGCATGTAGTACCGAg < 1:2802908/100‑1 (MQ=255) gggTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATATAAAGACTGACTAAGCATGTAGTACCGAg < 1:2740684/100‑1 (MQ=255) gggTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATATAAAGACTGACTAAGCATGTAGTACCGAg < 1:2682542/100‑1 (MQ=255) gggTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATATAAAGACTGACTAAGCATGTAGTACCGAg < 1:1273947/100‑1 (MQ=255) gggTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATATAAAGACTGACTAAGCATGTAGTACCGAg < 1:2239151/100‑1 (MQ=255) gggTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATATAAAGACTGACTAAGCATGTAGTACCGAg < 1:774029/100‑1 (MQ=255) gggTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATATAAAGACTGACTAAGCATGTAGTACCGAg < 1:4366115/100‑1 (MQ=255) gggTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATATAAAGACTGACTAAGCATGTAGTACCAAg < 1:1834517/100‑1 (MQ=255) gggTTGAAGCGTTAAAACTGAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATGTAAAGACTGACTAAGCATGTAGTACCGAg < 1:3445457/100‑1 (MQ=255) ggTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATGTAAAGACTGACTAAGCATGTAGTACCggga < 1:2030310/100‑4 (MQ=255) ggTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATGTAAAGACTGACTAAGCATGTAGTACCGAgt < 1:4427682/100‑2 (MQ=255) ggTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATGTAAAGACTGACTAAGCATGTAGTACCGAgg < 1:670091/100‑1 (MQ=255) ggTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATGTAAAGACTGACTAAGCATGTAGTACCGAgg < 1:2633382/100‑1 (MQ=255) ggTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATATAAAGACTGACTAAGCATGTGGTACCGAgg < 1:5030350/100‑1 (MQ=255) ggTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATATAAAGACTGACTAAGCATGTAGTACCGAgg < 1:4906031/100‑1 (MQ=255) ggTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATATAAAGACTGACTAAGCATGTAGTACCGAgg < 1:5146863/100‑1 (MQ=255) ggTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATATAAAGACTGACTAAGCATGTAGTACCGAgg < 1:3911909/100‑1 (MQ=255) ggTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATATAAAGACTGACTAAGCATGTAGTACCGAgg < 1:538481/100‑1 (MQ=255) ggTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATATAAAGACTGACTAAGCATGTAGTACCGAgg < 1:4627500/100‑1 (MQ=255) ggTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATATAAAGACTGACTAAGCATGTAGTACCGAgg < 1:4557879/100‑1 (MQ=255) ggTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATATAAAGACTGACTAAGCATGTAGTACCGAgg < 1:899698/100‑1 (MQ=255) ggTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATATAAAGACTGACTAAGCATGTAGTACCGAgg < 1:2485936/100‑1 (MQ=255) ggTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATATAAAGACTGACTAAGCATGTAGTACCGAgg < 1:143799/100‑1 (MQ=255) ggTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATATAAAGACTGACTAAGCATGTAGTACCGAgg < 1:1887953/100‑1 (MQ=255) ggTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATATAAAGACTGACTAAGCATGTAGTACCGAgg < 1:3652612/100‑1 (MQ=255) ggTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATATAAAGACTGACTAAGCATGTAGTACCGAgg < 1:3590265/100‑1 (MQ=255) ggTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATATAAAGACTGACTAAGCATGTAGTACCGAgg < 1:2902436/100‑1 (MQ=255) ggTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATATAAAGACTGACTAAGCATGTAGTACCGAgg < 1:2184783/100‑1 (MQ=255) gTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATATAAAGACTGACTAAGCATGTAGTACCGAggg < 1:4175529/100‑2 (MQ=255) ttGAAGCGTTAAAACTTATTCAGGCTAGTTTGTTAGTGTCGTGTCCGTCTGCAGCTGGCAAGCGAATATAAAGACTGACTAAGCATGTAGTACCGAggct < 1:3877847/100‑3 (MQ=255) ttGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATATAAAGACTGACTAAGCATGTAGTACCGAGGaa < 1:508029/100‑2 (MQ=255) ttGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATATAAAGACTGACTAAGCATGTAGTACCGAGGaa < 1:2542303/100‑2 (MQ=255) ttGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATATAAAGACTGACTAAGCATGTAGTACCGAGGAt < 1:4493060/100‑1 (MQ=255) ttGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATATAAAGACTGACTAAGCATGTAGTACCGAGGAt < 1:1370142/100‑1 (MQ=255) gAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATGTAAAGACTGACTAAGCATGTAGTACCGAGGATGt > 2:2387624/1‑100 (MQ=255) gAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATGTAAAGACTGACTAAGCATGTAGTACCGAGGATGt > 1:475854/1‑100 (MQ=255) gAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATATAAAGACTGACTAAGCATGTAGTACCGAgagatc > 2:713136/1‑95 (MQ=255) aGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGTCGTGTCCGTCCGCAGCTGGCAAGCGAATATAAAGACTTACTAAGCATGTAGTACCGAGGATGTAg > 2:3600889/1‑100 (MQ=255) gCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATATAAAGACTGACTAAGCATGTAGTACCGAGGATGTAgg < 1:994623/100‑1 (MQ=255) gCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATATAAAGACTGACTAAGCATGTAGTACCGAGGATGTAgg < 1:1081882/100‑1 (MQ=255) gCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATATAAAGACTGACTAAGCATGTAGTACCGAGGATGTAgg < 1:3510736/100‑1 (MQ=255) gCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATATAAAGACTGACTAAGCATGTAGTACCGAGGATGTAgg < 1:1795586/100‑1 (MQ=255) gCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATATAAAGACTGACTAAGCATGTAGTACCGAGGATGTAgg < 1:3150782/100‑1 (MQ=255) gTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATATAAAGACTGACTAAGCATGTAGTACCGAGGATGTAGGaa > 2:1626955/1‑100 (MQ=255) ttAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATGTAAAGACTGACTAAGCATGTAGTACCGAGGATGTAGGAATTTCGGAc < 2:2878116/100‑1 (MQ=255) ttAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATGTAAAGACTGACTAAGCATGTAGTACCGAGGATGTAGGAATTTCGGAc < 1:2584270/100‑1 (MQ=255) ttAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATATAAAGACTGACTAAGCATGTAGTACCGAGGATGTAGGAATTTCTGAc < 1:2303104/100‑1 (MQ=255) ttAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATATAAAGACTGACTAAGCATGTAGTACCGAGGATGTAGGAATTTCGGAc < 1:1137221/100‑1 (MQ=255) tGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATGTAAAGACTGACTAAGCATGTAGTACCGAGGATGCAGGAATTTCGGACGCGGGTTCAACTccc > 1:841678/1‑100 (MQ=255) gCGTGTCCGTCCGCAGCTGGCAAGCGAATGTAAAGACTGACTAAGCATGTAGTACCGAGGATGTAGGAATTTCGGACGCGGGTTCAACTCCCGCCAGCTc < 1:1673526/100‑1 (MQ=255) cGTGTCCGTCCGCAGCTGGCAAGCGAATATAAAGACTGACTAAGCATGTAGTACCGAGGATGTAGGAATTTCGGACGCGGGTTCAACTCCCGCCAGCTcc < 1:1753566/100‑1 (MQ=255) tgtCCGTCCGCAGCTGGCAATCGAATGTAAAGACTGACTCAGCATCTAGTACCGAGGATGTAGGAATTTCTGACGCGGGTTCAACTCCCGCCAGCTccac < 1:4817081/100‑1 (MQ=255) tgtCCGTCCGCAGCTGGCAAGCGAATGTAAAGACTGACTAAGCATGTAGTACCGAGGATGTAGGAATTTCGGACGCGGGTTCAACTCCCGCCAGCTccac < 1:2954826/100‑1 (MQ=255) tgtCCGTCCGCAGCTGGCAAGCGAATATAAAGACTGACTAAGCATGTAGTACCGAGGATGTAGGAATTTCGGACGCGGGTTCAACTCCCGCCAGCTccac < 1:4318751/100‑1 (MQ=255) tgtCCGTCCGCAGCTGGCAAGCGAATATAAAGACTGACTAAGCATGTAGTACCGAGGATGTAGGAATTTCGGACGCGGGTTCAACTCCCGCCAGCTccac < 1:2105678/100‑1 (MQ=255) gtccgtccGCAGCTGGCAAGCGAATGTAAAGACTGACTAAGCATGTAGTACCGAGGATGTAGGAATTTCGGACGCGGGTTCAACTCCCGCCAGCTccacc < 1:3338193/100‑1 (MQ=255) gtccgtccGCAGCTGGCAAGCGAATGTAAAGACTGACTAAGCATGTAGTACCGAGGATGTAGGAATTTCGGACGCGGGTTCAACTCCCGCCAGCTccacc < 1:3387128/100‑1 (MQ=255) gtccgtccGCAGCTGGCAAGCGAATGTAAAGACTGACTAAGCATGTAGTACCGAGGATGTAGGAATTTCGGACGCGGGTTCAACTCCCGCCAGCTccacc < 1:4073626/100‑1 (MQ=255) gtccgtccGCAGCTGGCAAGCGAATGTAAAGACTGACTAAGCATGTAGTACCGAGGATGTAGGAATTTCGGACGCGGGTTCAACTCCCGCCAGCTccacc < 1:584730/100‑1 (MQ=255) aaGCGAATGTAAAGACTGACTAAGCATGTAGTACCGAGGATGTAGGAATTTCGGACGCGGGTTCAACTCCCGCCAGCTCCACCAAAATTCTCCATCGGTg < 1:3827916/100‑1 (MQ=255) | CAAAAGAGATCGCGTGGAAGCCCTGCCTGGGGTTGAAGCGTTAAAACTTAATCAGGCTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCGAATGTAAAGACTGACTAAGCATGTAGTACCGAGGATGTAGGAATTTCGGACGCGGGTTCAACTCCCGCCAGCTCCACCAAAATTCTCCATCGGTGATTACCAG > NC_000913/2755781‑2755979 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |