| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 723,678 | A→G | V246A (GTG→GCG) | kdpD ← | fused sensory histidine kinase in two‑component regulatory system with KdpE: signal sensing protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 723,678 | 0 | A | G | 98.9% | 609.6 / ‑2.9 | 177 | V246A (GTG→GCG) | kdpD | fused sensory histidine kinase in two‑component regulatory system with KdpE: signal sensing protein |
| Reads supporting (aligned to +/- strand): ref base A (2/0); new base G (82/93); total (84/93) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.24e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.61e-01 | |||||||||||
Only 100 of 180 total aligned reads displayed.
ACCCAGCCGTGACGCCAGCCGCGCCGCTGCGCGGACCAGTTTTTCGCTGCCGGTGTTATGGCCGATGCATAAAAGGATCGCGTCGCGCGTGTGCCACACTTTCTCTTCGCCAGGATGCCCCCGCCAGGCGCGCATTTGCTCATCAACGCGATCGGCAGTACGGCGCAGTGCCAGTTCGCGCAGGGCGATCAGAT > NC_000913/723581‑723774 | cccAGCCGTGACGCCAGCCGCGCCGCTGCGCGGACCAGTTTTTCGCTGCCGGTGTTATGGCCGATGCATAAAAGGATCGCGTCGCGCGTGTGCCACGCtt > 2:4880465/1‑100 (MQ=255) ccAGCCGTTACGCCAGCCGCGCCGCTGCGCGGACCAGTTTTTCGCTGCCGGTGTTATGGCCGATGCATAAAAGGATCGCGTCGCGCGTGTGCCACGCttt < 2:3394674/100‑1 (MQ=255) cAGCCGTGACGCCAGCCGCGCCGCTGCGCGGACCAGTTTTTCGCTGCCGGTGTTATGGCCGATGCATAAAAGGATCGCGTCGCGCGTGTGCCACGCTTtc > 2:2976393/1‑100 (MQ=255) cAGCCGTGACGCCAGCCGCGCCGCGGCGCGGACCAGTTTTTCGCTGCCGGTGTTATGGCCGATGCATAAAAGGATCGCGTCGCGCGTGTGCCACGCTTtc < 2:1556578/100‑1 (MQ=255) cAGCCGGGACGCCAGCCGCGCCGCTGCGCGGACCAGTTTTTCGCTGCCGGTGTTATGGCCGATGCATAAAAGGATCGCGTCGCGCGTGTGCCACGCTTtc < 2:3408465/100‑1 (MQ=255) cAGCCGGGACGCCAGCCGCGCCCCTGCGCAGACCAGTTTTTCGCTGCCGGTGTTATGGCCGATGCATAAAAGGATCGCGTCGCGCGTGTGCCACGCTTtc < 1:4699041/100‑1 (MQ=255) gCCGTGACGCCAGCCGCGCCGCTGCGCGGACCAGTTTTTCGCTGCCGGTGTTATGGCTGATGCATAAAAGGATCGCGTCGCGCGTGTGCCACGCTTtctc < 1:4395282/100‑1 (MQ=255) gCCGTGACGCCAGCCGCGCCGCTGCGCGGACCAGTTTTTCGCTGCCGGTGTTATGGCCGATGCATAAAAGGATCGCGTCGCGCGTGTGCCACGCTTtctc > 2:2013296/1‑100 (MQ=255) gCCGTGACGCCAGCCGCGCCGCTGCGCGGACCAGTTTTTCGCTGCCGGTGTTATGGCCGATGCATAAAAGGATCGCGTCGCGCGTGTGCCACGCTTtctc < 2:3224167/100‑1 (MQ=255) gCCGTGACGCCAGCCGCGCCGCTGCGCGGACCAGTTTTTCGCTGCCGGTGTTATGGCCGATGCATAAAAGGATCGCGTCGCGCGTGTGCCACGCTTtctc > 2:3372308/1‑100 (MQ=255) gCCGTGACGCCAGCCGCGCCGCTGCGCGGACCAGTTTTTCGCTGCCGGTGTTATGGCCGATGCATAAAAGGATCGCGTCGCGCGTGTGCCACACTTtctc > 1:882334/1‑100 (MQ=255) ccGGGACGCCAGCCGCGCCGCTGCGCGGACCAGTTTTTCGCTGCCGGTGTTATGGCCGATGCATAAAAGGATCGCGTCGCGCGTGTGCCACGCTTTctct < 1:1937384/100‑1 (MQ=255) gTGACGCCAGCCGCGCCGCTGCGCGGACCAGTTTTTCGCTGCCGGTGTTATGGCCGATGCATAAAAGGATCGCGTCGCGCGTGTGCCACGCTTTCTCTTc < 1:3373247/100‑1 (MQ=255) tGACGCCAGCCGCGCCGCTGCGCGGACCAGTTTTTCGCTGCCGGTGTTATGGCCGATGCATAAAAGGATCGCGTCGCGCGTGTGCCACGCTTTCTCTTCg < 2:1418786/100‑1 (MQ=255) tGACGCCAGCCGCGCCGCTGCGCGGACCAGTTTTTCGCTGCCGGTGTTATGGCCGATGCATAAAAGGATCGCGTCGCGCGTGTGCCACGCTTTCTCTTCg < 2:1633347/100‑1 (MQ=255) tGACGCCAGCCGCGCCGCTGCGCGGACCAGTTTTTCGCTGCCGGTGTTATGGCCGATGCATAAAAGGATCGCGTCGCGCGTGTGCCACGCTTTCTCTTCg < 1:4873247/100‑1 (MQ=255) tGACGCCAGCCGCGCCGCTGCGCGGACCAGTTTTTCGCTGCCGGTGTTATGGCCGATGCATAAAAGGATCGCGTCGCGCGTGTGCCACGCTTTCTCTTCg < 1:4215810/100‑1 (MQ=255) tGACGCCAGCCGCGCCGCTGCGCGGACCAGTTTTTCGCTGCCGGTGTTATGGCCGATGCATAAAAGGATCGCGTCGCGCGTGTGCCACGCTTTCTCTTCg < 2:4452876/100‑1 (MQ=255) tGACGCCAGCCGCGCCGCTGCGCGGACCAGTTTTTCGCTGCCGGTGTTATGGCCGATGCATAAAAGGATCGCGTCGCGCGTGTGCCACGCTTTCTCTTCg < 2:3201381/100‑1 (MQ=255) cGCCAGCCGCGCCGCTGCGCGGACCAGTTTTTCGCTGCCGGTGTTATGGCCGATGCATAAAAGGATCGCGTCGCGCGTGTGCCACGCTTTCTCTTCGCCa > 2:1223552/1‑100 (MQ=255) ccAGCCGCGCCGCTGCGCGGACCAGTTTTTCGCTGCCGGTGTTATGGCCGATTCATAAAAGGATCGCGTCGCGCATGTGCCACGCTTTCTCTTCGCCAgg < 1:4609136/100‑1 (MQ=255) cAGCCGCGCCGCTGCGCGGACCAGTTTTTCGCTGCCGGTGTTATGGCCGATGCATAAAAGGATCGCGTCGCGCGTGTGCCACGCTTTCTCTTCGCCAGGa > 2:2852241/1‑100 (MQ=255) cAGCCGCGCCGCTGCGCGGACCAGTTTTTCGCTGCCGGTGTTATGGCCGATGCATAAAAGGATCGCGTCGCGCGTGTGCCACGCTTTCTCTTCGCCAGGa > 1:576335/1‑100 (MQ=255) aGCCGCGCCGCTGCGCGGACCAGTTTTTCGCTGCCGGTGTTATGGCCGATGCATAAAAGGATCGCGTCGCGCGTGTGCCACGCTTTCTCTTCGCCAGGAt < 1:1719824/100‑1 (MQ=255) gccgcgccgcTGCGCGGACCAGTTTTTCGCTGCCGGTGTTATGGCCGATGCATAAAAGGATCGCGTCGCGCGTGTGCCACGCTTTCTCTTCGCCAGGATg > 2:2771820/1‑100 (MQ=255) gccgcgccgcTGCGCGGACCAGTTTTTCGCTGCCGGTGTTATGGCCGATGCATAAAAGGATCGCGTCGCGCGTGTGCCACGCTTTCTCTTCGCCAGGATg < 2:2712579/100‑1 (MQ=255) gccgcgccgcTGCGCGGACCAGTTTTTCGCTGCCGGTGTTATGGCCGATGCATAAAAGGATCGCGTCGCGCGTGTGCCACGCTTTCTCTTCGCCAGGATg < 1:1364191/100‑1 (MQ=255) gatctgccgcTGCGCGGACCAGTTTTTCGCTGCCGGTGTTATGGCCGATGCATAAAAGGATCGCGTCGCGCGTGTGCCACGCTTTCTCTTCGCCAGGATg < 1:3710965/95‑1 (MQ=255) ccgcgccgcTGCGCGGACCAGTTTTTCGCTGCCGGTGTTATGGCCGATGCATAAAAGGATCGCGTCGCGCGTGTGCCACGCTTTCTCTTCGCCAGGATGc < 2:461857/100‑1 (MQ=255) cgcgccgcTGCGCGGACCAGTTTTTCGCTGCCGGTGTTATGGCCGATGCATAAAAGGATCGCGTCGCGCGTGTGCCACGCTTTCTCTTCGCCAGGATGcc > 2:2610985/1‑100 (MQ=255) gccgcTGCGCGGACCAGTTTTTCGCTGCCGGTGTTATGGCCGATGCATAAAAGGATCGCGTCGCGCGTGTGCCACGCTTTCTCTTCGCCAGGATGccccc > 1:738341/1‑100 (MQ=255) gccgcTGCGCGGACCAGTTTTTCGCTGCCGGTGTTATGGCCGATGCATAAAAGGATCGCGTCGCGCGTGTGCCACGCTTTCTCTTCGCCAGGATGccccc < 2:3128915/100‑1 (MQ=255) ccgcTGCGCGGACCAGTTTTTCGCTGCCGGTGTTATGGCCGATGCATAAAAGGATCGCGTCGCGCGTGTGCCACGCTTTCTCTTCGCCAGGATGCCCCCg < 1:2038541/100‑1 (MQ=255) ccgcTGCGCGGACCAGTTTTTCGCTGCCGGTGTTATGGCCGATGCATAAAAGGATCGCGTCGCGCGTGTGCCACGCTTTCTCTTCGCCAGGATGCCCCCg < 2:4512388/100‑1 (MQ=255) ccgcTGCGCGGACCAGTTTTTCGCTGCCGGTGTTATGGCCGATGCATAAAAGGATCGCGTCGCGCGTGTGCCACGCTTTCTCTTCGCCAGGATGCCCCCg > 2:2121925/1‑100 (MQ=255) cgcTGCGCGGACCAGTTTTTCGCTGCCGGTGTTATGGCCGATGCATAAAAGGATCGCGTCGCGCGTGTGCCACGCTTTCTCTTCGCCAGGATGCCCCCGc > 1:2654189/1‑100 (MQ=255) tGCGCGGACCAGTTTTTCGCTGCCGGTGTTATGGCCGATGCATAAAAGGATCGCGTCGCGCGTGTGCCACGCTTTCTCTTCGCCAGGATGCCCCCGCCAg < 2:1854212/100‑1 (MQ=255) gcgcGGACCAGTTTTTCGCTGCCGGTGTTATGGCCGATGCATAAAAGGATCGCGTCGCGCGTGTGCCACGCTTTCTCTTCGCCAGGATGCCCCCGCCAgg > 2:3832491/1‑100 (MQ=255) gcgcGGACCAGTTTTTCGCTGCCGGTGTTATGGCCGATGCAGAAAAGGATCGCGTCGCGCGTGTGCCACGCTTTCTCTTCGCCAGGATGCCCCCGCCAgg < 1:4327479/100‑1 (MQ=255) tcgGACCAGTTTTTCGCTGCCGGGGTTATGGCCGATGCTTAAAATGATCTCGTCGCGCGTGTTCCACGCTTTCGCTTCGCCAGGAGGCGCCCGCCAggtg > 2:231782/2‑98 (MQ=255) cgGACCAGTTTTTCGCTGCCGGTGTTATGGCCGATGCATAAAAGGATCGCGTCGCGCGTGTGCCACGCTTTCTCTTCGCCAGGATGCCCCCGCCAGgcgc < 2:3854751/100‑1 (MQ=255) ccAGTTTTTCGCTGCCGGTGTTATTGCCAATGCATAAAAGGACCGCCTCCCGCGTGTGCCACGCTTTCTCTTCGCCAGGATGCCCCCGCCAGGCGCGCAt < 2:26525/100‑1 (MQ=255) gTTTTTCGCTGCCGGTGTTATGGCCGATGCATAAAAGGATCGCGTCGCGCGTGTGCCACGCTTTCTCTTCGCCAGGATGCCCCCGCCAGGCGCGCATTTg < 1:2430257/100‑1 (MQ=255) ttttCGCTGCCGGTGTTATGGCCGATGCATAAAAGGATCGCGTCGCGCGTGTGCCACGCTTTCTCTTCGCCAGGATGCCCCCGCCAGGCGCGCATTTGCt < 1:16003/100‑1 (MQ=255) ttttCGCTGCCGGTGTTATGGCCGATGCATAAAAGGATCGCGTCGCGCGTGTGCCACGCTTTCTCTTCGCCAGGATGCCCCCGCCAGGCGCGCATTTGCt > 2:2827425/1‑100 (MQ=255) ttttCGCTGCCGGTGTTATAGCCGATGCATAAAAGGATCGCGTCGCGCGTGTGCCACGCTTTCTCTTCGCCAGGATGCCCCCGCCCGGCGCGCATTTGCt > 2:4638881/1‑100 (MQ=255) tttCGCTGCCGGTGTTATGGCCGATGCATAAAAGGATCGCGTCGCGCGTGTGCCACGCTTTCTCTTCGCCAGGATGCCCCCGCCAGGCGCGCATTTGCtc > 2:637418/1‑100 (MQ=255) ttCGCTGCCGGTGTTATGGCCGCTGCATAAAAGGATCGCGTCGCGCGTGTGCCACGCTTTCTCTTCGCCAGGATGCCCCCGCCAGGCGCGCATTTGCtca < 2:119618/100‑1 (MQ=255) ttCGCTGCCGGTGTTATGGCCGATGCATAAAAGGATCGCGTCGCGCGTGTGCCACGCTTTCTCTTCGCCAGGACGCCCCCGCCAGGCGCGCATTTGCtca > 1:4613716/1‑100 (MQ=255) cGCTGCCGGTGTTATGGCCGATGCATAAAAGGATCGCGTCGCGCGTGTGCCACGCTTTCTCTTCGCCAGGATGCCCCCGCCAGGCGCGCATTTGCtcatc > 1:3294075/1‑100 (MQ=255) cttctggTTTTATTGCCGATTCATAAAAGGATCGCGTCGCGCGTGTGCCACGCTTTCTCTTCGCCAGGATGCCCCCGCCAGGCGCGCATTTGCTCATCaa > 2:4081318/6‑100 (MQ=255) tGCCGGTGTTATGGCCGATGCATAAAAGGATCGCGTCGCGCGTGTGCCACGCTTTCTCTTCGCCAGGATGCCCCCGCCAGGCGCGCATTTGCTCATCAAc > 1:888626/1‑100 (MQ=255) gCCGGTGTTATGGCCGATGCATAAAAGGATCGCGTCGCGCGTGTGCCACGCTTTCTCTTCGCCAGGATGCCCCCGCCAGGCGCGCATTTGCTCATCAAcg > 2:1497614/1‑100 (MQ=255) cGGTGTTATGGCCGATGCATAAAAGGATCGCGTCGCGCGTGTGCCACGCTTTCTCTTCGCCAGGATGCCCCCGCCAGGCGCGCATTTGCTCATCAAcgcg > 2:2166305/1‑100 (MQ=255) cGGTGTTATGGCCGATGCATAAAAGGATCGAGTCGCGCGTGTGCCACGCTTTCTCTTCGCCAGGATGCCCCCGCCAGGCGCGCATTTGCTCATCAAcgcg > 2:2482064/1‑100 (MQ=255) gtgtTATGGCCGATGCATAAAAGGATCGCGTCGCGCGTGTGCCACGCTTTCTCTTCGCCAGGATGCCCCCGCCAGGCGCGCATTTGCTCATCAACGCGAt > 1:2884524/1‑100 (MQ=255) gtTATGGCCGATGCATAAAAGGATCGCGTCGCGCGTGTGCCACGCTTTCTCTTCGCCAGGATGCCCCCGCCAGGCGCGCATTTGCTCATCAACGCGATCg > 2:2667566/1‑100 (MQ=255) gtTATGGCCGATGCATAAAAGGATCGCGTCGCGCGTGTGCCACGCTTTCTCTTCGCCAGGATGCCCCCGCCAGGCGCGCATTTGCTCATCAACGCGATCg > 1:3793924/1‑100 (MQ=255) gtTATGGCCGATGCATAAAAGGATCGCGTCGCGCGTGTGCCACGCTTTCTCTTCGCCAGGATGCCCCCGCCAGGCGCGCATTTGCTCATCAACGCGATCg < 2:2406697/100‑1 (MQ=255) gtTATGGCCGATGCATAAAAGGATCGCGTCGCGCGTGTGCCACGCTTTCTCTTCGCCAGGATGCCCCCGCCAGGCGCGCATTTGCTCATCAACGCGATCg < 1:2226102/100‑1 (MQ=255) gtTATGGCCGATGCATAAAAGGATCGCGTCGCGCGTGTGCCACGCTTTCTCTTCGCCAGGATGCCCCCGCCAGGCGCGCATTTGCTCATCAACGCGATCg < 1:856978/100‑1 (MQ=255) ttATGGCCGATGCATAAAAGGATCGCGTCGCGCGTGTGCCACGCTTTCTCTTCGCCAGGATGCCCCCGCCAGGCGCGCATTTGCTCATCAACGCGATCgn < 1:4167136/100‑2 (MQ=255) tATGGCCTATGCATAAAAGGATCGCGTCGCGCGTGTGCCACGCTTTCTCTTCGTCAGGATGCCCCCGCCAGGCGCGCATTTGCTCATCAACGCGATCGGc < 2:4722461/100‑1 (MQ=255) tATGGCCGATGCATAAAAGGATCGCGTCGCGCGTGTGCCACGCTTTCTCTTCGCCAGGATGCCCCCGCCAGGCGCGCATTTGCTCATCAACGCGATCGGc > 1:3198786/1‑100 (MQ=255) tATGGCCGATGCATAAAAGGATCGCGTCGCGCGTGTGCCACGCTTTCTCTTCGCCAGGATGCCCCCGCCAGGCGCGCATTTGCTCATCAACGCGATCGGc < 1:3092070/100‑1 (MQ=255) tATGGCCGATGCATAAAAGGATCGCGTCGCGCGTGTGCCACGCTTTCTCTTCGCCAGGATGCCCCCGCCAGGCGCGCATTTGCTCATCAACGCGATCGGc > 2:4143861/1‑100 (MQ=255) tATGGCCGATGCATAAAAGGATCGCGTCGCGCGTGTGCCACGCTTTCTCTTCGCCAGGATGCCCCCGCCAGGCGCGCATTTGCTCATCAACGCGATCGGc < 1:129056/100‑1 (MQ=255) tATGGCCGATGCATAAAAGGATCGCGTCGCGCGTGTGCCACGCTTTCTCTTCGCCAGGATGCCCCCGCCAGGCGCGCATTTGCTCATCAACGCGATCGGc > 1:5081433/1‑100 (MQ=255) aTGGCCGATGCATAAAAGGATCGCGTCGCGCGTGTGCCACGCTTTCTCTTCGCCAGGATGCCCCCGCCAGGCGCGCATTTGCTCATCAACGCGATCGGCa < 1:165210/100‑1 (MQ=255) aTGGCCGATGCATAAAAGGATCGCGTCGCGCGTGTGCCACGCTTTCTCTTCGCCAGGATGCCCCCGCCAGGCGCGCATTTGCTCATCAACGCGATCGGCa < 2:4350655/100‑1 (MQ=255) aTGGCCGATGCATAAAAGGATCGCGTCGCGCGTGTGCCACGCTTTCTCTTCGCCAGGATGCCCCCGCCAGGCGCGCATTTGCTCATCAACGCGATCGGCa < 1:3002093/100‑1 (MQ=255) tGGCCGATGCATAAAAGGATCGCGTCGCGCGTGTGCCACGCTTTCTCTTCGCCAGGATGCCCCCGCCAGGCGCGCATTTGCTCATCAACGCGATCGGCAg < 1:3944723/100‑1 (MQ=255) ggCCGATGCATAAAAGGATCGCGTCTCGCGTGTGCCACGCTTTCTCTTCACCAGGATGCCCCCGCCAGGCGCGCATTTGCTCATCAACGCGATCGGCAGt > 2:2195719/1‑100 (MQ=255) ggCCGATGCATAAAAGGATCGCGTCGCGCGTGTGCCACGCTTTCTCTTCGCCAGGATGCCCCCGCCAGGCGCGCATTTGCTCATCAACGCGATCGGCAGt > 2:4560358/1‑100 (MQ=255) ggCCGATGCATAAAAGGATCGCGTCGCGCGTGTGCCACGCTTTCTCTTCGCCAGGATGCCCCCGCCAGGCGCGCATTTGCTCATCAACGCGATCGGCAGt > 1:628489/1‑100 (MQ=255) gCCGATGCATAAAAGGATCGCGTCGCGCGTGTGCCACGCTTTCTCTTCGCCAGGATGCCCCCGCCAGGCGCGCATTTGCTCATCAACGCGATCGGCAGTa > 2:1154794/1‑100 (MQ=255) gCCGATGCATAAAAGGATCGCGTCGCGCGTGTGCCACGCTTTCTCTTCGCCAGGATGCCCCCGCCAGGCGCGCATTTGCTCATCAACGCGATCGGCAGTa > 2:335077/1‑100 (MQ=255) aTGCATAAAAGGATCGCGTCGCGCGTGTGCCACGCTTTCTCTTCGCCAGGATGCCCCCGCCAGGCGCGCATTTGCTCATCAACGCGATCGGCAGTACGgc < 1:3041469/100‑1 (MQ=255) aTGCATAAAAGGATCGCGTCGCGCGTGTGCCACGCTTTCTCTTCGCCAGGATGCCCCCGCCAGGCGCGCATTTGCTCATCAACGCGATCGGCAGTACGgc < 2:3265832/100‑1 (MQ=255) gCATAAAAGGATCGCGTCGCGCGTGTGCCACGCTTTCTCTTCGCCAGGATGCCCCCGCCAGGCGCGCATTTGCTCATCAACGCGATCGGCAGTACGgcgc > 1:457027/1‑100 (MQ=255) aTAAAAGGATCGCGTCGCGCGTGTGCCACGCTTTCTCTTCGCCAGGATGCCCCCGCCAGGCGCGCATTTGCTCATCAACGCGATCGGCAGTACGGCGCAg > 2:1678251/1‑100 (MQ=255) tAAAAGGATCGCGTCGCGCGTGTGCCACGCTTTCTCTTCGCCAGGATGCCCCCGCCAGGCGCGCATTTGCTCATCAACGCGATCGGCAGTACGGCGCAGt > 2:2890665/1‑100 (MQ=255) aaGGATCGCGTCGCGCGTGTGCCACGCTTTCTCTTCGCCAGGATGCCCCCGCCAGGCGCGCATTTGCTCATCAACGCGATCGGCAGTACGGCGCAGTGcc < 2:4256770/100‑1 (MQ=255) aaGGATCGCGTCGCGCGTGTGCCACGCTTTCTCTTCGCCAGGATGCCCCCGCCAGGCGCGCATTTGCTCATCAACGCGATCGGCAGTACGGCGCAGTGcc < 1:1346024/100‑1 (MQ=255) aaGGATCGCGTCGCGCGTGTGCCACGCTTTCTCTTCGCCAGGATGCCCCCGCCAGGCGCGCATTTGCTCATCAACGCGATCGGCAGTACGGCGCAGTGcc < 1:3511280/100‑1 (MQ=255) aGGATCGCGTCGCGCGTGTGCCACGCTTTCTCTTCGCCAGGATGCCCCCGCCAGGCGCGCATTTGCTCATCAACGCGATCGGCAGTACGGCGCAGTGCCa > 1:2690234/1‑100 (MQ=255) ggATCGCGTCGCGCGTGTGCCACGCTTTCTCTTCGCCAGGATGCCCCCGCCAGGCGCGCATTTGCTCATCAACGCGATCGGCAGTACGGCGCAGTGCCAg > 1:1741767/1‑100 (MQ=255) gATCGCGTCGCGCGTGTGCCACGCTTTCTCTTCGCCAGGATGCCCCCGCCAGGCGCGCATTTGCTCATCAACGCGATCGGCAGTACGGCGCAGTGCCAGt > 2:257906/1‑100 (MQ=255) gATCGCGTCGCGCGTGTGCCACGCTTTCTCTTCGCCAGGATGCCCCCGCCAGGCGCGCATTTGCTCATCAACGCGATCGGCAGTACGGCGCAGTGCCAGt > 2:220205/1‑100 (MQ=255) cgcgcgTGTGCCACGCTTTCTCTTCGCCAGGATGCCCCCGCCAGGCGCGCATTTGCTCATCAACGCGATCGGCAGTACGGCGCAGTGCCAGTTCGCGCAg < 1:688364/100‑1 (MQ=255) gcgcgTGTGCCACGCTTTCTCTTCGCCAGGATGCCCCCGCCAGGCGCGCATTTGCTCATCAACGCGATCGGCAGTACGGCGCAGTGCCAGTTCGCGCAgg < 1:2528598/100‑1 (MQ=255) gcgcgTGTGCCACGCTTTCTCTTCGCCAGGATGCCCCCGCCAGGCGCGCATTTGCTCATCAACGCGATCGGCAGTACGGCGCAGTGCCAGTTCGCGCAgg > 1:37643/1‑100 (MQ=255) gtgCCACGCTTTCTCTTCGCCAGGATGCCCCCGCCAGGCGCGCATTTGCTCATCAACGCGATCGGCAGTACGGCGCAGTGCCAGTTCGCGCAGGGCGATc > 2:3105653/1‑100 (MQ=255) tgCCACGCTTTCTCTTCGCCAGGATGCCCCCGCCAGGCGCGCATTTGCTCATCAACGCGATCGGCAGTACGGCGCAGTGCCAGTTCGCGCAGGGCGATCa > 1:1622943/1‑100 (MQ=255) gCCACGCTTTCTCTTCGCCAGGATGCCCCCGCCAGGCGCGCCGTTGCCCATCAACGCGATCGGCAGTACGGCGCAGTGCCAGTTCGCGCAGGGCGATCAg > 1:2732453/1‑100 (MQ=255) gCCACGCTTTCTCTTCGCCAGGATGCCCCCGCCAGGCGCGCATTTGCTCATCAACGCGATCGGCAGTACGGCGCAGTGCCAGTTCGCGCAGGGCGATCAg > 2:3634571/1‑100 (MQ=255) ccACGCTTTCTCTTCGCCAGGATGCCCCCGCCAGGCGCGCATTTGCTCATCAACGCGATCGGCAGTACGGCGCAGTGCCAGTTCGCGCAGGGCGATCAGa > 2:4214540/1‑100 (MQ=255) ccACGCTTTCTCTTCGCCAGGATGCCCCCGCCAGGCGCGCATTTGCTCATCAACGCGATCGGCAGTACGGCGCAGTGCCAGTTCGCGCAGGGCGATCAGa < 1:4752104/100‑1 (MQ=255) ccACGCTTTCTCTTCGCCAGGATGCCCCCGCCAGGCGCGCATTTGCTCATCAACGCGATCGGCAGTACGGCGCAGTGCCAGTTCGCGCAGGGCGATCAGa < 2:3738759/100‑1 (MQ=255) cacgCTTTCTCTTCGCCAGGATGCCCCCGCCAGGCGCGCATTTGCTCATCAACGCGATCGGCAGTACGGCGCAGTGCCAGTTCGCGCAGGGCGATCAGAt > 1:1191223/1‑100 (MQ=255) | ACCCAGCCGTGACGCCAGCCGCGCCGCTGCGCGGACCAGTTTTTCGCTGCCGGTGTTATGGCCGATGCATAAAAGGATCGCGTCGCGCGTGTGCCACACTTTCTCTTCGCCAGGATGCCCCCGCCAGGCGCGCATTTGCTCATCAACGCGATCGGCAGTACGGCGCAGTGCCAGTTCGCGCAGGGCGATCAGAT > NC_000913/723581‑723774 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |