BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,461,981	T→C	G363G (GGT→GGC)	paaJ →	3‑oxoadipyl‑CoA/3‑oxo‑5,6‑dehydrosuberyl‑CoA thiolase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,461,981	0	T	C	100.0%	628.1 / NA	179	G363G (GGT→GGC)	paaJ	3‑oxoadipyl‑CoA/3‑oxo‑5,6‑dehydrosuberyl‑CoA thiolase
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (91/88); total (91/88)

Only 100 of 181 total aligned reads displayed.

GGGTGTACTACGCGAATTGGGGCTGCCTGATGATGCCCCACATGTTAACCCCAACGGAGGCGCTATCGCCTTAGGCCATCCGTTGGGAATGAGTGGTGCCCGCCTGGCACTGGCTGCCAGCCATGAGCTGCATCGGCGTAACGGTCGTTACGCATTGTGCACCATGTGCATCGGTGTCGGTCAGGGCATCGCC  >  NC_000913/1461885‑1462077

nggTGTACTACGCGAATTGGGGCTGCCTGATGATGCCCCACATGTTAACCCCAACGGAGGCGCTATCGCCTTAGGCCATCCGTTGGGAATGAGTGGCGcc                                                                                               >  1:4100634/2‑100 (MQ=255)

gggTGTACTACGCGAATTGGGGCTGCCTGATGCTGCCCCACATGTTAACCCCACCGGGGGCGCTATCGCCCTAGGCCATCCGTTGGGAATGACTGGCGcc                                                                                               >  2:3459462/1‑100 (MQ=255)

 ggTGTACTACGCGAATTGGGGCTGCCTGATGATGCCCCACATGTTAACCCCAACGGAGGCGCTATCGCCTTAGGCCATCCGTTGGGAATGAGTGGCGccc                                                                                              <  1:34394/100‑1 (MQ=255)

  ntgtACTACGCGAATTGGGGCTGCCTGATGATGCCCCACATGTTAACCCCAACGGAGGCGCGATCGCCTTAGTCCATCCGTTGGGAAGGAGTGGCGCCCg                                                                                             >  1:4126818/2‑100 (MQ=255)

  gtgtACTACGCGAATTGGGGCTGCCTGATGATGCCCCACATGTTAACCCCAACGGAGGCGCTATCGCCTTAGGCCATCCGTTGGGAATGAGTGGCGCCCg                                                                                             <  1:4780670/100‑1 (MQ=255)

  gtgtACTACGCGAATTGGGGCTGCCTGATGATGCCCCACATGTTAACCCCAACGGAGGCGCTATCGCCTTAGGCCATCCGTTGGGAATGAGTGGCGCCCg                                                                                             >  2:1644458/1‑100 (MQ=255)

   tgtACTACGCGAATTGGGGCTGCCTGATGATGCCCCACATGTTAACCCCAACGGAGGCGCTATCGCCTTAGGCCATCCGTTGGGAATGAGTGGCGCCCGc                                                                                            >  1:1883496/1‑100 (MQ=255)

      actacGCGAATTGGGGCTGCCTGATGATGCCCCACATGTTAACCCCAACGGAGGCGCTATCGCCTTAGGCCATCCGTTGGGAATGAGTGGCGCCCGCCTg                                                                                         >  1:247731/1‑100 (MQ=255)

       ctacGCGAATTGGGGCTGCCTGATGATGCCCCACATGTTAACCCCAACGGAGGCGCTATCGCCTTAGGCCATCCGTTGGGAATGAGTGGCGCCCGCCTgg                                                                                        >  1:4197108/1‑100 (MQ=255)

       ctacGCGAATTGGGGCTGCCTGATGATGCCCCACATGTTAACCCCAACGGAGGCGCTATCGCCTTAGGCCATCCGTTGGGAATGAGTGGCGCCCGCCTgg                                                                                        <  2:3393468/100‑1 (MQ=255)

        tacGCGAATTGGGGCTGCCTGATGATGCCCCACATGTTAACCCCAACGGAGGCGCTATCGCCTTAGGCCATCCGTTGGGAATGAGTGGCGCCCGCCTGGc                                                                                       >  1:5004249/1‑100 (MQ=255)

         acGCGAATTGGGGCTGCCTGATGATGCCCCACATGTTAACCCCAACGGAGGCGCTATCGCCTTAGGCCATCCGTTGGGAATGAGTGGCGCCCGCCTGGCa                                                                                      >  2:513096/1‑100 (MQ=255)

         acGCGAATTGGGGCTGCCTGATGATGCCCCACATGTTAACCCCAACGGAGGCGCTATCGCCTTAGGCCATCCGTTGGGAATGAGTGGCGCCCGCCTGGCa                                                                                      <  2:3746251/100‑1 (MQ=255)

          cgcgAATTGGGGCTGCCTGATGATGCCCCACATGTTAACCCCAACGGAGGCGCTATCGCCTTAGGCCATCCGTTGGGAATGAGTGGCGCCCGCCTGGCag                                                                                     >  2:1764399/1‑99 (MQ=255)

          cgcgAATTGGGGCTGCCTGATGATGCCCCACATGTTAACCCCAACGGAGGCGCTATCGCCTTAGGCCATCCGTTGGGAATGAGTGGCGCCCGCCTGGCAc                                                                                     >  2:4011477/1‑100 (MQ=255)

           gcgAATTGGGGCTGCCTGATGATGCCCCACATGTTAACCCCAACGGAGGCGCTATCGCCTTAGGCCATCCGTTGGGAATGAGTGGCGCCCGCCTGGCACt                                                                                    >  1:3908485/1‑100 (MQ=255)

                tgggggCTGCCTGAGGAGGCCCCACATGTGGACCCCAACGGAGGCGCCATCGCCTTAGGCCATCCGTTGGGAATGAGTGGCGCCCGCCTGGCACTGGCTg                                                                               <  2:4059074/98‑1 (MQ=255)

                  ggggCTGCCTGATGATGCCCCACATGTTAACCCCAACGGAGGCGCTATCGCCTTAGGCCATCCGTTGGGAATGAGTGGCGCCCGCCTGGCACTGGCTgcc                                                                             >  2:3391991/1‑100 (MQ=255)

                  ggggCTGCCTGATGATGCCCCACATGTTAACCCCAACGGAGGCGCTATCGCCTTAGGCCATCCGTTGGGAATGAGTGGCGCCCGCCTGGCACTGGCTgcc                                                                             <  1:2618915/100‑1 (MQ=255)

                  ggggCTGCCTGATGATGCCCCACATGTTAACCCCAACGGAGGCGCTATCGCC‑TAGGCCATCCGTTGGGAATGAGTGGCGCCCGCCTTGCACTGGCTgcca                                                                            >  1:4653439/1‑100 (MQ=255)

                   gggCGGCCTGATGATGCCCCACATGTTAACCCCAACGGAGGCGCTATCGCCTTAGGCCATCCGTTGGGAATGAGTGGCGCCCGCCTGGCACTGGCTgcca                                                                            <  2:4113952/100‑1 (MQ=255)

                    ggCTGCCTGATGATGCCCCACATGTTAACCCCAACGGAGGCGCTATCGCCTTAGGCCATCCGTTGGGAATGAGTGGCGCCCGCCTGGCACTGGCTgccag                                                                           >  2:2254874/1‑100 (MQ=255)

                    ggCTGCCTGATGATGCCCCACATGTTAACCCCAACGGAGGCGCTATCGCCTTAGGCCATCCGTTGGGAATGAGTGGCGCCCGCCTGGCACTGGCTgccag                                                                           >  2:3063998/1‑100 (MQ=255)

                    ggCTGCCTGATGATGCCCCACATGTTAACCCCAACGGAGGCGCTATCGCCTTAGGCCATCCGTTGGGAATGAGTGGCGCCCGCCTGGCACCGGCTgccag                                                                           >  2:4396846/1‑100 (MQ=255)

                     gCTGCCTGATGATGCCCCACATGTTAACCCCAACGGAGGCGCTATCGCCTTAGGCCATCCGTTGGGAATGAGTGGCGCCCGCCTGGCACTGGCTgccagc                                                                          <  2:4581974/100‑1 (MQ=255)

                     gCTGCCTGATGATGCCCCACATGTTAACCCCAACGGAGGCGCTATCGCCTTAGGCCATCCGTTGGGAATGAGTGGCGCCCGCCTGGCACTGGCTgccagc                                                                          >  1:3839200/1‑100 (MQ=255)

                     gCTGCCTGATGATGCCCCACATGTTAACCCCAACGGAGGCGCTATCGCCTTAGGCCATCCGTTGGGAATGAGTGGCGCCCGCCTGGCACTGGCTgccagc                                                                          <  1:3122857/100‑1 (MQ=255)

                      cTGCCTGATGATGCCCCACATGTTAACCCCCACGGAGGCGCTATCGCCTTAGGCCATCCGTTGGGAATGAGTGGCGCCCGCCTGGCACTGGCTgccagcc                                                                         <  2:2204071/100‑1 (MQ=255)

                      cTGCCTGATGATGCCCCACATGTTAACCCCAACGGAGGCGCTATCGCCTTAGGCCATCCGTTGGGAATGAGTGGCGCCCGCCTGGCACTGGCTgccagcc                                                                         <  2:1835102/100‑1 (MQ=255)

                       tGCCTGATGATGCCCCACATGTTAACCCCAACGGAGGCGCTATCGCCTTAGGCCATCCGTTGGGAATGAGTGGCGCCCGCCTGGCACTGGCTgccagcca                                                                        >  1:4000992/1‑100 (MQ=255)

                         ccTGATGATGCCCCACATGTTAACCCCAACGGAGGCGCTATCGCCTTAGGCCATCCGTTGGGAATGAGTGGCGCCCGCCTGGCACTGGCTGCCAGCCATg                                                                      <  1:3968426/100‑1 (MQ=255)

                         ccTGACGATGCCCTACATGTTAACCCCAACGGAGGCGCTATCGCCTTAGGCCATCCGTTGGGAATGAGTGGCGCCCGCCTGGCACTGGCTGCCAGCCATg                                                                      <  2:4726397/100‑1 (MQ=255)

                          cTGATGATGCCCCACATGTTAACCCCAACGGAGGCGCTATCGCCTTAGGCCATCCGTTGGGAATGAGTGGCGCCCGCCTGGCACTGGCTGCCAGCCATGa                                                                     >  2:242302/1‑100 (MQ=255)

                           tgatgaTGCCCCACATGTTAACCCCAACGGAGGCGCTATCGCCTTAGGCCATCCGTTGGGAATGAGTGGCGCCCGCCTGGCACTGGCTGCCAGCCATGAg                                                                    <  2:4625181/100‑1 (MQ=255)

                           tgatgaTGCCCCACATGTTAACCCCAACGGAGGCGCTATCGCCTTAGGCCATCCGTTGGGAATGAGTGGCGCCCGCCTGGCACTGGCTGCCAGCCATGAg                                                                    >  1:3090907/1‑100 (MQ=255)

                            gatgatGCCCCACATGTTAACCCCAACGGAGGCGCTATCGCCTTAGGCCATCCGTTGGGAATGAGTGGCGCCCGCCTGGCACTGGCTGCCAGCCATGAGc                                                                   <  1:2373621/100‑1 (MQ=255)

                            gatgatGCCCCACATGTTAACCCCAACGGAGGCGCTATCGCCTTAGGCCATCCGTTGGGAATGAGTGGCGCCCGCCTGGCACTGGCTGCCAGCCATGAGc                                                                   <  2:1628893/100‑1 (MQ=255)

                              tgatgCCCCACATGTTAACCCCAACGGAGGCGCTATCGCCTTAGGCCATCCGTTGGGAATGAGTGGCGCCCGCCTGGCACTGGCTGCCAGCCATGAGCTg                                                                 >  2:1146951/1‑100 (MQ=255)

                               gatgCCCCACATGTTAACCCCAACGGAGGCGCTATCGCCTTAGGCCATCCGTTGGGAATAAGTGGCGCCCGCCTGGCACTGGCTGCCAGCCATGAGCTGc                                                                <  2:2034165/100‑1 (MQ=255)

                               gatgCCACACATGTTAACTCCAACGGAGGCGCTATCGCCTTAGGCCATCCGTTGGGAATGAGTGGCGCCCGCCTGGCACTGGCTGCCAGCCATGAGCTGc                                                                >  1:4296941/1‑100 (MQ=255)

                                   ccccACATGTTAACCCCAACGGAGGCGCTATCGCCTTAGGCCATCCGTTGGGAATGAGTGGCGCCCGCCTGGCACTGGCTGCCAGCCATGAGCTGCATCg                                                            <  2:1411892/100‑1 (MQ=255)

                                   ccccACATGTTAACCCCAACGGAGGCGCTATCGCCTTAGGCCATCCGTTGGGAATGAGTGGCGCCCGCCTGGCACTGGCTGCCAGCCATGAGCTGCATCg                                                            >  2:771745/1‑100 (MQ=255)

                                    cccACATGTTAACCCCAACGGAGGCGCTATCGCCGTAGGCCATCCGTTGGGAATGAGTGGCGCCCGCCTGGCACTGGCTGCCAGCCATGAGCTGCATCgg                                                           <  2:3097920/100‑1 (MQ=255)

                                     ccACATGTTAACCCCAACGGAGGCGCTATCGCCTTAGGCCATCCGTTGGGAATGAGTGGCGCCCGCCTGGCACTGGCTGCCAGCCATGAGCTGCATCGGc                                                          <  1:4272528/100‑1 (MQ=255)

                                      cacaTGTTAACCCCAACGGAGGCGCTATCGCCTTAGGCCATCCGTTGGGAATGAGTGGCGCCCGCCTGGCACTGGCTGCCAGCCATGAGCTGCATCGGCg                                                         >  1:380008/1‑100 (MQ=255)

                                        caTGTTAACCCCAACGGAGGCGCTATCGCCTTAGGCCATCCGTTGGGAATGAGTGGCGCCCGCCTGGCACTGGCTGCCAGCCATGAGCTGCATCGGCGTa                                                       <  1:2842443/100‑1 (MQ=255)

                                          tGTTAACCCCAACGGAGGCGCTATCGCCTTAGGCCATCCGTTGGGAATGAGTGGCGCCCGCCTGGCACTGGCTGCCAGCCATGAGCTGCATCGGCGTAAc                                                     >  2:4164385/1‑100 (MQ=255)

                                          tGTTAACCCCAACGGAGGCGCTATCGCCTTAGGCCATCCGTTGGGAATGAGTGGCGCCCGCCTGGCACTGGCTGCCAGCCATGAGCTGCATCGGCGTAAc                                                     >  2:892343/1‑100 (MQ=255)

                                           gTTAACCCCAACGGAGGCGCTATCGCCTTAGGCCATCCGTTGGGAATGAGTGGCGCCCGCCTGGCACTGGCTGCCAGCCATGAGCTGCATCGGCGTAACg                                                    >  1:3368606/1‑100 (MQ=255)

                                           gTTAACCCCAACGGAGGCGCTATCGCCTTAGGCCATCCGTTGGGAATGAGTGGCGCCCGCCTGGCACTGGCTGCCAGCCATGAGCTGCATCGGCGTAACg                                                    >  1:379267/1‑100 (MQ=255)

                                                ccccAACGGAGGCGCTATCGCCTTAGGCCATCCGTTGGGAATGAGTGGCGCCCGCCTGGCACTGGCTGCCAGCCATGAGCTGCATCGGCGTAACGGTCGt                                               >  2:3681521/1‑100 (MQ=255)

                                                 cccAACGGAGGCGCTATCGCCTTAGGCCATCCGTTGGGAATGAGTGGCGCCCGCCTGGCACTGGCTGCCAGCCATGAGCTGCATCGGCGTAACGGTCGtt                                              >  2:1285599/1‑100 (MQ=255)

                                                    aaCGGAGGCGCTATCGCCTTAGGCCATCCGTTGGGAATGAGTGGCGCCCGCCTGGCACTGGCTGCCAGCCATGAGCTGCATCGGCGTAACGGTCGTTACg                                           <  2:3125482/100‑1 (MQ=255)

                                                     aCGGAGGCGCTATCGCCTTAGGCCATCCGTTGGGAATGAGTGGCGCCCGCCTGGCACTGGCTGCCAGCCATGAGCTGCATCGGCGTAACGGTCGTTACGc                                          >  2:690572/1‑100 (MQ=255)

                                                      gggAGGCGCTATCGCCTTAGGCCATCCGTTGGGAATGAGTGGCGCCCGCCTGGCACTGGCTGCCAGCCATGAGCTGCATCGGCGTAACGGTCGTTACGCa                                         <  2:1732549/99‑1 (MQ=255)

                                                      cGGAGGCGCTATCGCCTTAGGCCATCCGTTGGGAATGAGTGGCGCCCGCCTGGCACTGGCTGCCAGCCATGAGCTGCATCGGCGTAACGACCGTTACGcc                                         <  1:2403625/100‑2 (MQ=255)

                                                       ggAGGCGCTATCGCCTTAGGCCATCCGTTGGGAATGAGTGGCGCCCGCCTGGCACTGGCTGCCAGCCATGAGCTGCATCGGCGTAACGGTCGTTACGCAt                                        <  1:1410928/100‑1 (MQ=255)

                                                         aGGCGCTATCGCCTTAGGCCATCCGTTGGGAATGAGTGGCGCCCGCCTGGCACTGGCTGCCAGCCATGAGCTGCATCGGCGTAACGGTCGTTACGCATtg                                      <  1:885352/100‑1 (MQ=255)

                                                         aGGCGCTATCGCCTTAGGCCATCCGTTGGGAATGAGTGGCGCCCGCCTGGCACTGGCTGCCAGCCATGAGCTGCATCGGCGTAACGGTCGTTACGCATtg                                      <  1:2216925/100‑1 (MQ=255)

                                                         aGGCGCTACCGCCTTAAGCCATCCGTTGGGAATGAGTGGCGCCCGCCTGGCACTGGCTGCCAGCCATGAGCTGCATCGGCGTAACGGTCGTTACGCATtg                                      >  2:4915309/1‑100 (MQ=255)

                                                          ggCGCTATCGCCTTAGGCCATCCGTTGGGAATGAGTGGCGCCCGCCTGGCACTGGCTGCCAGCCATGAGCTGCATCGGCGTAACGGTCGTTACGCATtgt                                     >  1:5064514/1‑100 (MQ=255)

                                                          ggCGCTATCGCCTTAGGCCATCCGTTGGGAATGAGTGGCGCCCGCCTGGCACTGGCTGCCAGCCATGAGCTGCATCGGCGTAACGGTCGTTACGCATtgt                                     <  1:4881879/100‑1 (MQ=255)

                                                            cgcTATCGCCTTAGGCCATCCGTTGGGAATGAGTGGCGCCCGCCTGGCACTGGCTGCCAGCCATGAGCTGCATCGGCGTAACGGTCGTTACGCATTGTGc                                   >  1:3067634/1‑100 (MQ=255)

                                                             gcTATCGCCTTAGGCCATCCGTTGGGAATGAGTGGCGCCCGCCTGGCACTGGCTGCCAGCCATGAGCTGCATCGGCGTAACGGTCGTTACGCATTGTGCa                                  <  1:4398625/100‑1 (MQ=255)

                                                              cTATCGCCTTAGGCCATCCGTTGGGAATGAGTGGCGCCCGCCTGGCACTGGCTGCCAGCCATGAGCTGCATCGGCGTAACGGTCGTTACGCATTGTGCAc                                 >  1:2176616/1‑100 (MQ=255)

                                                              cTATCGCCTTAGGCCAGCCGTTGGGAATGAGTGGCGCCCGCCGGGCACTGGCTGCCAGCCATGAGCTGCATCGGCGTAACGGTCGTTACGCATTGTGCAc                                 <  1:2082509/100‑1 (MQ=255)

                                                               tATCGCCTTAGGCCATCCGTTGGGAATGAGTGGCGCCCGCCTGGCACTGGCTGCCAGCCATGAGCTGCATCGGCGTAACGGTCGTTACGCATTGTGCAcc                                >  2:2074904/1‑100 (MQ=255)

                                                               tATCGCCTTAGGCCATCCGTTGGGAATGAGTGGCGCCCGCCTGGCACTGGCTGCCAGCCATGAGCTGCATCGGCGTAACGGTCGTTACGCATTGTGCAcc                                <  2:3956846/100‑1 (MQ=255)

                                                                aTCGCCTTAGGCCATCCGTTGGGAATGAGTGGCGCCCGCCTGGCACTGGCTGCCAGCCATGAGCTGCATCGGCGTAACGGTCGTTACGCATTGTGCACCa                               <  2:539998/100‑1 (MQ=255)

                                                                  cGCCTTAGGCCATCCGTTGGGAATGAGTGGCGCCCGCCTGGCACTGGCTGCCAGCCATGAGCTGCATCGGCGTAACGGTCGTTACGCATTGTGCACCAtg                             >  2:2071801/1‑100 (MQ=255)

                                                                   gCCTTAGGCCATCCGTTGGGAATGAGTGGCGCCCGCCTGGCACTGGCTGCCAGCCATGAGCTGCATCGGCGTAACGGTCGTTACGCATTGTGCACCAtgt                            >  1:4282086/1‑100 (MQ=255)

                                                                    ccTTAGGCCATCCGTTGGGAATGAGTGGCGCCCGCCTGGCACTGGCTGCGAGCCATGAGCTGCATCGGCGTAACGGTCGTTACGCATTGTGCACCAtgtg                           <  2:4996389/100‑1 (MQ=255)

                                                                    ccTTAGGCATTCCGTTGGGAATGAGTGGCGCCCGCCTGGCACTGGCTGCCAGCCATGAGCTGCATCGGCGTAACGGTCGTTACGCATTGTGCACCAtgtg                           <  1:422378/100‑1 (MQ=255)

                                                                       tAGGCCATCCGTTGGGAATGAGTGGCGCCCGCCTGGCACTGGCTGCCAGCCATGAGCTGCATCGTCGTAACGGTCGTTACGCATTGTGCACCATGTGCAt                        >  1:4378316/1‑100 (MQ=255)

                                                                       tAGGCCATCCGTTGGGAATGAGTGGCGCCCGCCTGGCACTGGCTGCCAGCCATGAGCTGCATCGGCGTAACGGTCGTTACGCATTGTGCACCATGTGCAt                        >  1:1068044/1‑100 (MQ=255)

                                                                         ggCCATCCGTTGGGAATGAGTGGCGCCCGCCTGGCACTGGCTGCCAGCCATGAGCTGCATCGGCGTAACGGTCGTTACGCATTGTGCACCATGTGCATCg                      >  1:3564807/1‑100 (MQ=255)

                                                                         ggCCATCCGTTGGGAATGAGTGGCGCCCGCCTGGCACTGGCTGCCAGCCATGAGCTGCATCGGCGTAACGGTCGTTACGCATTGTGCACCATGTGCATCg                      <  2:3566369/100‑1 (MQ=255)

                                                                         ggCCATCCATTGGGAATGAGTGGCGCCCGCCTGGCACTGGCTGCCAGCCATGAGCTGCATCGGCGTAACGGTCGTTACGCATTGTGCACCATGTGCATCg                      >  1:1043762/1‑100 (MQ=255)

                                                                          gacATCCGTTGGGAATGAGTGGCGCCCGCCTGGCACTGGCTGGCATCCATGAGCTGCATCGGCGTAACGGTCATTACGCCTTGTGCACCATGTGCATCgg                     <  2:5062831/98‑1 (MQ=255)

                                                                          gCCATCCGTTGGGAATGGGTGGCGCCCGTCGGGCAATGGTTGCCAGCTATGAGCTGCATCGGCGGAACGGTAGTTACGCATTGTGCACCATGTGCATCgg                     <  2:3153292/100‑1 (MQ=255)

                                                                          gCCATCCGTTGGGAATGAGTGGCGCCCGCCTGGCACTGGCTGCCAGCCATGAGCTGCATCGGCGTAACGGTCGTTACGCATTGTGCACCATGTGCATCgg                     <  1:83222/100‑1 (MQ=255)

                                                                          gCCATCCGTTGGGAATGAGTGGCGCCCGCCTGGCACTGGCTGCCAGCCATGAGCTGCATCGGCGTAACGGTCGTTACGCATTGTGCACCATGTGCATCgg                     <  2:2226318/100‑1 (MQ=255)

                                                                          gCCATCCGTTGGGAATGAGTGGCGCCCGCCTGGCACTGGCTGCCAGCCATGAGCTGCATCGGCGTAACGGTCGTTACGCATTGTGCACCATGTGCATCgg                     <  2:3719655/100‑1 (MQ=255)

                                                                          cgcctCCGTTGGGAATGAGTGGCGCCCGCCTGGCACTGGCTGCCAGCCATGAGCTGCATCGGCGTAACGGTCGTTACGCATTGTGCACCATGTGCATCgg                     >  2:173912/5‑100 (MQ=255)

                                                                            cATCCGTTGGGAATGAGTGGCGCCCGCCTGGCACTGGCTGCCAGCCATGAGCTGCATCGGCGTAACGGTCGTTACGCATTGTGCACCATGTGCATCGgtg                   <  2:4341935/100‑1 (MQ=255)

                                                                              tCCGTTGGGAATGAGTGGCGCCCGCCTGGCACTGGCTGCCAGCCATGAGCTGCATCGGCGTAACGGTCGTTACGCATTGTGCACCATGTGCATCGGTGTc                 <  2:2489408/100‑1 (MQ=255)

                                                                                cGTTGGGAATGAGTGGCGCCCGCCTGGCACTGGCTGCCAGCCATGAGCTGCATCGGCGTAACGGTCGTTACGCATTGTGCACCATGTGCATCGGTGTCgg               <  1:3212960/100‑1 (MQ=255)

                                                                                cGTTGGGAATGAGTGGCGCCCGCCTGGCACTGGCTGCCAGCCATGAGCTGCATCGGCGTAACGGTCGTTACGCATTGTGCACAATGTGCATCGGTGTCgg               <  2:3848317/100‑1 (MQ=255)

                                                                                 gTTGGGAATGAGTGGCGCCCGCCTGGCACTGGCTGCCAGCCATGAGCTGCATCGGCGTAACGGTCGTTACGCATTGTGCACCATGTGCATCGGTGTCGGt              >  2:2972767/1‑100 (MQ=255)

                                                                                    gggAATGAGTGGCGCCCGCCTGGCACTGGCTGCCAGCCATGAGCTGCATCGGCGTAACGGTCGTTACGCATTGTGCACCATGTGCATCGGTGTCGGTCAg           >  1:4589784/1‑100 (MQ=255)

                                                                                     ggAATGAGTGGCGCCCGCCTGGCACTGGCTGCCAGCCATGAGCTGCATCGGCGTAACGGTCGTTACGCATTGTGCACCCTGTGCATCGGTGTCGGTCAgg          <  2:3324519/100‑1 (MQ=255)

                                                                                     ggAATGAGTGGCGCCCGCCTGGCACTGGCTGCCAGCCATGAGCTGCATCGGCGTAACGGTCGTTACGCATTGTGCACCATGTGCATCGGTGTCGGTCAgg          >  2:462087/1‑100 (MQ=255)

                                                                                     ggAATGAGTGGCACCCGCCTGGCACTGGCTGCCAGCCATGAGCTGCATCGGCGTAACGGTCGTTACGCATTGTGCACCATGTGCATCGGTGTCGGTCAgg          >  2:2705688/1‑100 (MQ=255)

                                                                                      gAATGAGTGGCGCCCGCCTGGCACTGGCTGCCAGCCATGAGCTGCATCGGCGTAACGGTCGTTACGCATTGTGCACCATGTGCATCGGTGTCGGTCAggg         >  2:2356440/1‑100 (MQ=255)

                                                                                          gAGTGGCGCCCGCCTGGCACTGGCTGCCAGCCATGAGCTGCATCGGCGTAACGGTCGTTACGCATTGTGCACCATGTGCATCGGTGTCGGTCAGGGCATc     <  2:1003042/100‑1 (MQ=255)

                                                                                          gAGTGGCGCCCGCCTGGCACTGGCTGCCAGCCATGAGCTGCATCGGCGTAACGGTAGTTACGCATTGTGCACCATGTGCATCGGTGTCGGTCAGGGCATc     >  2:3037615/1‑100 (MQ=255)

                                                                                           aGTGGCGCCCGCCTGGCACTGGCTGCCAGCCATGAGCTGCATCGGCGTAACGGTCGTTACGCATTGTGCACCATGTGCATCGGTGTCGGTCAGGGCATCg    <  1:1340485/100‑1 (MQ=255)

                                                                                           aGTGGCGCCCGCCTGGCACTGGCTGCCAGCCATGAGCTGCATCGGCGTAACGGTCGTTACGCATTGTGCACCATGTGCATCGGTGTCGGTCAGGGCATCg    >  1:2722019/1‑100 (MQ=255)

                                                                                             tggcgCCCGCCTGGCACTGGCTGCCAGCCATGAGCTGCATCGGCGTAACGGTCGTTACGCATTGTGCACCATGTGCATCGGTGTCGGTCAGGGCATCGcc  <  1:784328/100‑1 (MQ=255)

                                                                                             tggcgCCCGCCTGGCACTGGCTGCCAGCCATGAGCTGCATCGGCGTAACGGTCGTTACGCATTGTGCACCATGTGCATCGGTGTCGGTCAGGGCATCGcc  <  2:1330747/100‑1 (MQ=255)

GGGTGTACTACGCGAATTGGGGCTGCCTGATGATGCCCCACATGTTAACCCCAACGGAGGCGCTATCGCCTTAGGCCATCCGTTGGGAATGAGTGGTGCCCGCCTGGCACTGGCTGCCAGCCATGAGCTGCATCGGCGTAACGGTCGTTACGCATTGTGCACCATGTGCATCGGTGTCGGTCAGGGCATCGCC  >  NC_000913/1461885‑1462077

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`