| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,779,038 | G→A | A1230V (GCC→GTC) | ypjA ← | adhesin‑like autotransporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,779,038 | 0 | G | A | 99.4% | 585.1 / NA | 167 | A1230V (GCC→GTC) | ypjA | adhesin‑like autotransporter |
| Reads supporting (aligned to +/- strand): ref base G (0/0); major base A (90/76); minor base C (1/0); total (91/76) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 167 total aligned reads displayed.
GTTGTGTGGACTCGCTTTCATTATGTTCAACCGCTCGCGAATACTGTTTAGCTCAGCATCAAATACCAACGGTAATGTTGCTGCCATATTGAGTACGGCTGCCGTAGAAGGCGTAATGCGTTTCTCCGGAACGGGTGTCGGCGTTGGATCGGGAGTAGGGTCTGGTTTTGGATTTGGGTCTGGCTTTGGATCGG > NC_000913/2778941‑2779134 | gttgtGTGGACTCGCTTTCATTATGTTCAACCGCTCGCGAATACTGTTTAGCTCAGCATCAAATACCAACGGTAATGTTGCTGCCATATTGAGTACGACt > 1:3282257/1‑100 (MQ=255)gttgtGTGGACTCGCTTTCATTATGTTCAACCGCTCGCGAATACTGTTTAGCTCAGCATCAAATACCAACGGTAATGTTGCTGCCATATTGAGTACGACt > 2:3285145/1‑100 (MQ=255) ttgtGTGGACTCGCTTTCATTATGTTCAACCGCTCGCGAATACTGTTTAGCTCAGCATCAAATACCAACGGTAATGTTGCTGCCATATTGAGTACGACTg < 1:2610623/100‑1 (MQ=255) tgtgtgGACTCGCTTTCATTATGTTCAACCGCTCGCGAATACTGTTTAGCTCAGCATCAAATACCAACGGTAATGTTGCTGCCATATTGAGTACGACTga > 2:2580661/1‑99 (MQ=255) tgtgtgGACTCGCTTTCATTATGTTCAACCGCTCGCGAATACTGTTTAGCTCAGCATCAAATACCAACGGTAATGTTGCTGCCATATTGAGTACGACTGc > 2:3781265/1‑100 (MQ=255) tgtgtgGACTCGCTTTCATTATGTTCAACCGCTCGCGAATACTGTTTAGCTCAGCATCAAATACCAACGGTAATGTTGCTGCCATATTGAGTACGACTGc > 2:2120487/1‑100 (MQ=255) tgtgtgGACTCGCTTTCATTATGTTCAACCGCTCGCGAATACTGTTTAGCTCAGCATCAAATACCAACCGTAATGTTGCTGCCATATTGAGTACGACTGc < 1:4141162/100‑1 (MQ=255) tgtgGACTCGCTTTCATTATGTTCAACCGCTCGCGAATACTGTTTAGCTCAGCATCAAATACCAACGGTAATGTTGCTGCCATATTGAGTACGACTGCCg < 1:4809890/100‑1 (MQ=255) tgGACTCGCTTTCATTATGTTCAACCGCTCGCGAATACTGTTTAGCTCAGCATCAAATACCAACGGTAATGTTGCTGCCATATTGAGTACGACTGCCGTa > 1:5087897/1‑100 (MQ=255) tgGACTCGCTTTCATTATGTTCAACCGCTCGCGAATACTGTTTAGCTCAGCATCAAATACCAACGGTAATGTTGCTGCCATATTGAGTACGACTGCCGTa < 1:5128927/100‑1 (MQ=255) ggACTCGCTTTCATTATGTTCAACCGCTCGCGAATACTGTTTAGCTCAGCATCAAATACCAACGGTAATGTTGCTGCCATATTGAGTACGACTGCCGTAg < 2:4757172/100‑1 (MQ=255) cTCGCTTTCATTATGTTCAACCGCTCGCGAATACTGTTTAGCTCAGCATCAAATACCAACGGTAATGTTGCTGCCATATTGTGTACGACTGCCGTAGAAg > 2:2193234/1‑100 (MQ=255) cTCGCTTTCATTATGTTCAACCGCTCGCGAATACTGTTTAGCTCAGCATCAAATACCAACGGTAATGTTGCTGCCATATTGAGTACGACTGCCGTAGAAg < 1:4667184/100‑1 (MQ=255) tCGCTTTCATTATGTTCAACCGCTCGCGAATACTGTTTAGCTCAGCATCAAATACCAACGGTAATGTTGCTGCCATATTGAGTACGACTGCCGTAGAAgg < 1:4712702/100‑1 (MQ=255) cGCTTTCATTATGTTCAACCGCTCGCGAATACTGTTTAGCTCAGCATCAAATACCAACGGTAATGTTGCTGCCATATTGAGTACGACTGCCGTAGAAGGc > 1:541358/1‑100 (MQ=255) cGCTTTCATTATGTTCAACCGCTCGCGAATACTGTTTAGCTCAGCATCAAATACCAACGGTAATGTTGCTGCCATATTGAGTACGACTGCCGTAGAAGGc > 1:541081/1‑100 (MQ=255) cGCTTTCATTATGTTCAACCGCTCGCGAATACTGTTTAGCTCAGCATCAAATACCAACGGTAATGTTGCTGCCATATTGAGTACGACTGCCGTAGAAGGc > 1:2903731/1‑100 (MQ=255) cTTTCATTATGTTCAACCGCTCGCGAATACTGTTTAGCTCAGCATCAAATACCAACGGTAATGTTGCTGCCATATTGAGTACGACTGCCGTAGAAGGCGt < 2:2350285/100‑1 (MQ=255) cTTTCATTATGTTCAACCGCTCGCGAATACTGTTTAGCTCAGCATCAAATACCAACGGTAATGTTGCTGCCATATTGAGTACGACTGCCGTAGAAGGCGt < 2:455462/100‑1 (MQ=255) cTTTCATTATGTTCAACCGCTCGCGAATACTGTTTAGCTCAGCATCAAATACCAACGGTAATGTTGCTGCCATATTGAGTACGACTGCCGTAGAAGGCGt < 2:4722703/100‑1 (MQ=255) tttCATTATGTTCAACCGCTCGCGAATACTGTTTAGCTCAGCATCAAATACCAACGGTAATGTTGCTGCCATATTGAGTACGAGTGCCGTAGAAGGCGTa > 2:4258537/1‑100 (MQ=255) tttCATTATGTTCAACCGCTCGCGAATACTGTTTAGCTCAGCATCAAATACCAACGGTAATGTTGCTGCCATATTGAGTACGACTGCCGTAGAAGGCGTa < 2:2880834/100‑1 (MQ=255) cATTATGTTCAACCGCTCGCGAATACTGTTTAGCTCAGCATCAAATACCAACGGTAATGTTGCTGCCATATTGAGTACGACTGCCGTAGAAGGCGTAATg > 2:2456606/1‑100 (MQ=255) cATTATGTTCAACCGCTCGCGAATACTGTTTAGCTCAGCATCAAATACCAACGGTAATGTTGCTGCCATATTGAGTACGACTGCCGTAGAAGGCGTAATg > 2:3203191/1‑100 (MQ=255) aTGTTCAACCGCTCGCGAATACTGTTTAGCTCAGCATCAAATACCAACGGTAATGTTGCTGCCATATTGAGTACGACTGCCGTAGAAGGCGTAATGCGtt < 2:533659/100‑1 (MQ=255) aTGTTCAACCGCTCGCGAATACTGTTTAGCTCAGCATCAAATACCAACGGTAATGTTGCTGCCATATTGAGTACGACTGCCGTAGAAGGCGTAATGCGtt < 1:2466567/100‑1 (MQ=255) aTGTTCAACCGCTCGCGAATACTGTTTAGCTCAGCATCAAATACCAACGGTAATGTTGCTGCCATATTGAGTACGACTGCCGTAGAAGGCGTAATGCGtn < 1:427588/100‑2 (MQ=255) aTGTTCAACCGCTCGCGAATACTGTTTAGCTCAGCATCAAATACCAACGGTAATGTTGCTGCCATATTCAGTACGACTGCCGTAGAAGGCGTAATGCGtt < 2:4832878/100‑1 (MQ=255) tGTTCAACCGCTCGCGAATACTGTTTAGCTCAGCATCAAATACCAACGGTAATGTTGCTGCCATATTGAGTACGACTGCCGTAGAAGGCGTAATGCGttt > 2:4391825/1‑100 (MQ=255) tGTTCAACCGCTCGCGAATACTGTTTAGCTCAGCATCAAATACCAACGGTAATGTTGCTGCCATATTGAGTACGACTGCCGTAGAAGGCGTAATGCGttt > 2:837935/1‑100 (MQ=255) cAACCGCTCGCGAATACTGTTTAGCTCAGCATCAAATACCAACGGTAATGTTGCTGCCATATTGAGTACGACTGCCGTAGAAGGCGTAATGCGTTTCTcc < 1:176205/100‑1 (MQ=255) cAACCGCTCGCAAATACTGTTTAGCTCAGCATCAAATACCAGCCGTAATGTTGCTGCCATATGCAGTACGACTGCCGTAGAAGGCGTAATGCGTTTCTcc < 1:112306/100‑1 (MQ=255) aaCCGCTCGCGAATACTGTTTAGCTCAGCATCAAATACCAACGGTAATGTTGCTGCCATATTGAGTACGACTGCCGTAGAAGGCGTAATGCGTTTCTCCg > 1:675940/1‑100 (MQ=255) aCCGCTCGCGAATACTGTTTAGCTCAGCATCAAATACCAACGGTAATGTTGCTGCCATATTGAGTACGACTGCCGTAGAAGGCGTAATGCGTTTCTCCgg < 1:2304411/100‑1 (MQ=255) gCTCGCGAATACTGTTTAGCTCAGCATCAAATACCAACGGTAATGTTGCTGCCATATTGAGTACGACTGCCGTAGAAGGCGTAATGCGTTTCTCCGGAAc < 1:1835602/100‑1 (MQ=255) tCGCGAATACTGTTTAGCTCAGCATCAAATACCAACGGTAATGTTGCTGCCATATTGAGTACGACTGCCGTAGAAGGCGTAATGCGTTTCTCCGGAACgn < 1:1895035/100‑2 (MQ=255) cgcgAATACTGTTTAGCTCAGCATCAAATACCAACGGTAATGTTGCTGCCATATTGAGTACGACTGCCGTAGAAGGCGTAATGCGTTTCTCCGGAACggg > 1:244588/1‑100 (MQ=255) cgcgAATACTGTTTAGCTCAGCATCAAATACCAACGGTAATGTTGCTGCCATATTGAGTACGACTGCCGTAGAAGGCGTAATGCGTTTCTCCGGAACggg > 1:4362945/1‑100 (MQ=255) gcgAATACTGTTTAGCTCAGCATCAAATACCAACGGTAATGTTGCTGCCATATTGAGTACGACTGCCGTAGAAGGCGTAATGCGTTTCTCCGGAACGGgt < 1:4319928/100‑1 (MQ=255) cgAATACTGTTTAGCTCAGCATCAAATACCAACGGTAATGTTGCTGCCATATTGAGTACGACTGCCGTAGAAGGCGTAATGCGTTTCTCCGGAACGGgtg < 1:2146616/100‑1 (MQ=255) cgAATACTGTTTAGCTCAGCATCAAATACCAACGGTAATGTTGCTGCCATATTGAGTACGACTGCCGTAGAAGGCGTAATGCGTTTCTCCGGAACGGgtg < 2:1974563/100‑1 (MQ=255) cgAATACTGTTTAGCTCAGCAAAAAATACCAAGGGTAATGTTGAGGCCATATGTAGTATGCGTGCCGTAGATGGCGTAATGAGTTTTTCCGGAACGGgtg > 2:180714/1‑100 (MQ=255) tACTGTTTAGCTCAGCATCAAATACCAACGGTAATGTTGCTGCCATATTGAGTACGACTGCCGTAGAAGGCGTAATGCGTTTCTCCGGAACGGGTGTCgg < 1:205294/100‑1 (MQ=255) aCTGTTTAGCTCAGCATCAAATACCAACGGTAATGTTGCTGCCATATTGAGTACGACTGCCGTAGAAGGCGTAATGCGTTTCTCCGGAACGGGTGTCGGc > 2:3365468/1‑100 (MQ=255) cTGTTTAGCTCAGCATCAAATACCAACGGTAATGTTGCTGCCATATTGAGTACGACTGCCGTAGAAGGCGTAATGCGTTTCTCCGGAACGGGTGTCGGCg < 2:306686/100‑1 (MQ=255) tGTTTAGCTCAGCATCAAATACCAACGGTAATGTTGCTGCCATATTGAGTACGACTGCCGTAGAAGGCGTAATGCGTTTCTCCGGAACGGGTGTCGGCGt > 1:928417/1‑100 (MQ=255) tGTTTAGCTCAGCATCAAATACCAACGGTAATGTTGCTGCCATATTGAGTACGACTGCCGTAGAAGGCGTAATGCGTTTCTCCGGAACGGGTGTCGGCGt < 1:5000441/100‑1 (MQ=255) tttAGCTCAGCATCAAATACCAACGGTAATGTTGCTGCCATATTGAGTACGACTGCCGTAGAAGGCGTAATGCGTTTCTCCGGAACGGGTGTCGGCGTTg < 1:399288/100‑1 (MQ=255) ttAGCTCAGCATCAAATACCAACGGTAATGTTGCTGCCATATTGAGTACGACTGCCGTAGAAGGCGTAATGCGTTTCTCCGGAACGGGTGTCGGCGTTgg < 1:4986216/100‑1 (MQ=255) gCTCAGCATCAAATACCAACGGTAATGTTGCTGCCATATTGAGTACGACTGCCGTAGAAGGCGTAATGCGTTTCTCCGGAATGGGTGTCGGCGTTGGATc > 2:1093184/1‑100 (MQ=255) cTCAGCATCAAATACCAACGGTAATGTTGCTGCCATATTGCGTACGACTGCCGTAGAAGGCGTAATGCGTTTCTCCGGAACGGGTGTCGGCGTTGGATCg > 2:3761027/1‑100 (MQ=255) tCAGCATCAAATACCAACGGTAATGTTGCTGCCATATTGAGTACGACTGCCGTAGAAGGCGTAATGCGTTTCTCCGGAACGGGTGTCGGCGTTGGATCgg > 2:1918814/1‑100 (MQ=255) cAGCATCAAATACCAACGGTAATGTTGCTGCCATATTGAGTACGACTGCCGTAGAAGGCGTAATGCGTTTCTCCGGAACGGGTGTCGGCGTTGGATCggg < 1:1309333/100‑1 (MQ=255) cAGCATCAAAGACCAACGGTAATGTTGCGGCCATATTGAGTACGACTGCCGTAGAAGGCGTAATGCGTTTCTCCTGAACGGGTGTCGGCGTTGGATCggg < 2:4043857/100‑1 (MQ=255) gCATCAAATACCAACGGTAATGTTGCTGCCATATTGAGTACGACTGCCGTAGAAGGCGTAATGCGTTTCTCCGGAACGGGTGTCGGCGTTGGATCGGGAg > 2:2691249/1‑100 (MQ=255) gCATCAAATACCAACGGTAATGTTGCTGCCATATTGAGTACGACTGCCGTAGAAGGCGTAATGCGTTTCTCCGGAACGGGTGTCGGCGTTGGATCGGGAg > 1:4454391/1‑100 (MQ=255) gCATCAAATACCAACGGTAATGTTGCTGCCATATTGAGTACGACTGCCGTAGAAGGCGTAATGCGTTTCTCCGGAACGGGTGTCGGCGTTGGATCGGGAg > 1:1391169/1‑100 (MQ=255) gCATCAAATACCAACGGTAATGTTGCTGCCATATTGAGGACGACTGCCGGAGAAGGCGTAATGCGTTTCTCCGGAACGGGTGTCGGCGGTGGATCGGGAg > 2:231962/1‑100 (MQ=255) aTCAAATACCAGCGGTAATGTTGCTGCCATATTGAGTACGACTGCCGTAGAAGGCGTAATGCGTTTCTCCGGAACGGGTGTCGGCGTTGGATCGGGAGTa < 1:1446048/100‑1 (MQ=255) tCAAATACCAACGGTAATGTTGCTGCCATATTGAGTACGACTGCCGTAGAAGGCGTAATGCGTTTCTCCGGAACGGGTGTCGGCGTTGGATCGGGAGTAg > 1:2316014/1‑100 (MQ=255) cAAATACCAACGGTAATGTTGCTGCCATATTGAGTACGACTGCCGTAGAAGGCGTAATGCGTTTCTCCGGAACGGGTGTCGGCGCTGGATCGGGAGTAgg > 1:4004220/1‑100 (MQ=255) aaaaCACCAACGGTAATGTTGCTGCCATATTAAGTACGAAAAACGTAGAAGGCGTAAAGCGTTTCTACGGAAAGGGAGTCGTAGTAAAATCGGGAGTAgg > 2:4305130/2‑100 (MQ=255) aaaTACCAACGGTAATGTTGCTGCCATATTGAGTACGACTGCCGTAGAAGGCGTAATGCGTTTCTCCGGAACGGGTGTCGGCGTTGGATCGGGAGTAggg < 1:2433667/100‑1 (MQ=255) atctcAACGGTAATGTTGCTGCCATATTGAGTACGACTGCCGTAGAAGGCGTAATGCGTTTCTCCGGAACGGGTGTCGGCGTTGGATCGGGAGTAGGGTc < 1:1513894/96‑1 (MQ=255) aTACCAACGGTAATGTTGCTGCCATATTGAGTACGACTGCCGTAGAAGGCGTAATGCGTTTCTCCGGAACGGGTGTCGGCGTTGGATCGGGAGTAGGGTc < 1:1393470/100‑1 (MQ=255) aTACCAACGGTAATGTTGCTGCCATATTGAGTACGACTGCCGTAGAAGGCGTAATGCGTTTCTCCGGAACGGGTGTCGGCGTTGGATCGGGAGTAGGGTc < 1:785047/100‑1 (MQ=255) aTACCAACGGTAATGTTGCTGCCATATTGAGTACGACTGCCGTAGAAGGCGTAATGCGTTTCTCCGGAACGGGTGTCGGCGTTGGATCGGGAGTAGGGTc > 1:3009077/1‑100 (MQ=255) ccAACGGTAATGTTGCTGCCATATTGAGTACGACTGCCGTAGAAGGCGTAATGCGTTTCTCCGGAACGGGTGTCGGCGTTGGATCGGGAGTAGGGTCTgg > 2:1437485/1‑100 (MQ=255) ccAACGGTAATGTTGCTGCCATATTGAGTACGACTGCCGTAGAAGGCGTAATGCGTTTCTCCGGAACGGGTGTCGGCGTTGGATCGGGAGTAGGGTCTgg > 2:4911907/1‑100 (MQ=255) ccAACGGTAATGTTGCTGCCAAATTGAGTACGACTGCCGTAGAAGGCGTAATGCGTTTCTCCGGAACGGGTGTCGGCGTTGGATCGGGAGTAGGGTCTgg > 1:2726388/1‑100 (MQ=255) cAACGGTAATGTTGCTGCCATATTGAGTACGACTGCCGTAGAAGGCGTAATGCGTTTCTCCGGAACGGGTGTCGGCGTTGGATCGGGAGTAGGGTcagat > 2:1492267/1‑96 (MQ=255) cAACGGTAATGTTGCTGCCATATTGAGTACGACTGCCGTAGAAGGCGTAATGCGTTTCTCCGGAACGGGTGTCGGCGTTGGATCGGGAGTAGGGTCTgga > 1:319552/1‑99 (MQ=255) aaCGGTAATGTTGCTGCCATATTGAGTACGACTGCCGTAGAAGGCGTAATGCGTTTCTCCGGAACGGGTGTCGGCGTTGGATCGGGAGTAGGGTCTGGtt < 2:1906631/100‑1 (MQ=255) cGGTAATGTTGGTGCCATATTGAGCACGAGTGCCGTAGAAGGCGTAATGCGTTTCTCCGGGACGGGTGTCGGCATTGGAGCGGGAGTAGGGTCTGGtttt > 1:4819149/1‑100 (MQ=255) ggTAAGGATGCTGCCAGATTGAGTACGACTGCCGTAGAAGGCGTAATGCGTTTCTCCGGAACGGGGGTCAACGTTGGATCGGGAGTAGGGTCgggaattg > 2:513324/1‑95 (MQ=255) gTAATGTTGCTGCCATATTGAGTACGACTGCCGTAGAAGGCGTAATGCGTTTCTCCGGAACGGGTGTCGGCGTTGGATCGGGAGTAGGGTCTGGTTTTgg > 2:2081611/1‑100 (MQ=255) tAATGTTGCTGCCATATTGAGTACGACTGCCGTAGAAGGCGTAATGCGTTTCTCCGGAACGGGTGTCGGCGTTGGATCGGGAGTAGGGTCTGGTTTTggn < 1:4094548/100‑2 (MQ=255) gTTGCTGCCATATTGAGTACGACTGCCGTAGAAGGCGTAATGCGTTTCTCCGGAACGGGTGTCGGCGTTGGATCGGGAGTAGGGTCTGGTTTTGGATTTg < 1:4573632/100‑1 (MQ=255) ttGCTGCCATATTGAGTACGACTGCCGTAGAAGGCGTAATGCGTTTCTCCGGAACGGGTGTCGGCGTTGGATCGGGAGTAGGGTCTGGTTTTGGATTTgg > 1:1105135/1‑100 (MQ=255) tgctgcCATATTGAGTACGACTGCCGTAGAAGGCGTAATGCGTTTCTCCGGAACGGGTGTCGGCGTTGGATCGGGAGTAGGGTCTGGTTTTGGATTTggg < 2:599341/100‑1 (MQ=255) tgctgcCATATTGAGTACGACTGCCGTAGAAGGCGTAATGCGTTTCTCCGGAACGGGTGTCGGCGTTGGATCGGGAGTAGGGTCTGGTTTTGGATTTggg > 1:4509741/1‑100 (MQ=255) gctacCATATTGAGTACGACTGCCGTAGAAGGCGTAATGCGTTTCTCCGGAACGGGTGTCGGCGTTGGATCGGGAGTAGGGTCTGGTTTTGGATTTGGGt > 1:3969378/1‑100 (MQ=255) ctgcCATATTGAGTACGACTGCCGTAGAAGGCGTAATGCGTTTCTCCGGAACGGGTGTCGGCGTTGGATCGGGAGTAGGGTCTGGTTTTGGATTTGGGTc < 1:1943350/100‑1 (MQ=255) gcCATATTGAGTACGACTGCCGTAGAAGGCGTAATGCGTTTCTCCGGAACGGGTGTCGGCGTTGGATCGGGAGTAGGGTCTGGTTTTGGATTTGGGTCTg > 1:803852/1‑100 (MQ=255) cATATTGAGTACGACTGCCGTAGAAGGCGTAATGCGTTTCTCCGGAACGGGTGTCGGCGTTGGATCGGGAGTAGGGTCTGGTTTTGGATTTGGGTCTGGc > 2:2508620/1‑100 (MQ=255) cATATTGAGTACGACTGCCGTAGAAGGCGTAATGCGTTTCTCCGGAACGGGTGTCGGCGTTGGATCGGGAGTAGGGTCTGGTTTTGGATTTGGGTCTGGc > 2:4877612/1‑100 (MQ=255) atatTGAGTACGACTGCCGTAGAAGGCGTAATGCGTTTCTCCGGAACGGGTGTCGGCGTTGGATCGGGAGTAGGGTCTGGTTTTGGATTTGGGTCTGGCt < 1:870769/100‑1 (MQ=255) atatTGAGTACGACTGCCGTAGAAGGCGTAATGCGTTTCTCCGGAACGGGTGTCGGCGTTGGATCGGGAGTAGGGTCTGGTTTTGGATTTGGGTCTGGCt < 1:3048746/100‑1 (MQ=255) atatTGAGTACGACTGCCGTAGAAGGCGTAATGCGTTTCTCCGGAACGGGTGTCGGCGTTGGATCGGGAGTAGGGTCTGGTTTTGGATTTGGGTCTGGCt < 1:4760163/100‑1 (MQ=255) tatTGAGTACGACTGCCGTAGAAGGCGTAATGCGTTTCTCCGGAACGGGTGTCGGCGTTGGATCGGGAGTAGGGTCTGGTTTTGGATTTGGGTCTGGCtt > 1:4204898/1‑100 (MQ=255) tatTGAGTACGACTGCCGTAGAAGGCGTAATGCGTTTCTCCGGAACGGGTGTCGGCGTTGGATCGGGAGTAGGGTCTGGTTTTGGATTTGGGTCTGGCtt > 1:2056439/1‑100 (MQ=255) tatTGAGTACGACTGCCGTAGAAGGCGTAATGCGTTTCTCCGGAACGGGTGTCGGCGTTGGATCGGGAGTAGGGGCTGGTTTTGGATTTGGGTCGGGCtt > 2:793544/1‑100 (MQ=255) atTGAGTACGACTGCCGTAGAAGGCGTAATGCGTTTCTCCGGAACGGGTGTCGGCGTTGGATCGGGAGTAGGGTCTGGTTTTGGATTTGGGTCTGGCttt < 1:3174579/100‑1 (MQ=255) ttGAGTACGACTGCCGTAGAAGGCGTAATGCGTTTCTCCGGAACGGGTGTCGGCGTTGGATCGGGAGTAGGGTCTGGTTTTGGATTTGGGTCTGGCTTTg < 2:1145981/100‑1 (MQ=255) ttGAGTACGACTGCCGTAGAAGGCGTAATGCGTTTCTCCGGAACGGGTGTCGGCGTTGGATCGGGAGTAGGGTCTGGTTTTGGATTTGGGTCTGGCTTTg < 1:1883902/100‑1 (MQ=255) gAGTAAGACTGCCGTAGAAGGCGTAATGCGTTTCTCCGGAACGGGTGTCGGCGTTGGATCGGGAGTAGGGTCTGGTTTTGGATTTGGGTCTGGCTTTGGa > 2:4466404/1‑100 (MQ=255) aGTACGACTGCCGTAGAAGGCGTAATGCGTTTCTCCGGAACGGGTGTCGGCGTTGGATCGGGCGCAGGGTCTGGTTTTGGATTTGGGTCTGGCTTTGGAt > 2:4589173/1‑100 (MQ=255) aGTACGACTGCCGTAGAAGGCGTAATGCGTTTCTCCGGAACGGGTGTCGGCGTTGGATCGGGAGTAGGGTCTGGTTTTGGATTTGGGTCTGGCTTTGGAt > 1:3714189/1‑100 (MQ=255) tACGACTGCCGTAGAAGGCGTAATGCGTTTCTCCGGAACGGGTGTCGGCGTTGGATCGGGAGTAGGGTCTGGTTTTGGATTTGGGTCTGGCTTTGGATCg < 2:2867975/100‑1 (MQ=255) aCGACTGCCGTAGAAGGCGTAATGCGTTTCTCCGGAACGGGTGTCGGCGTTGGATCGGGAGTAGGGTCTGGTTTTGGATTTGGGTCTGGCTTTGGATCgg > 1:2861051/1‑100 (MQ=255) | GTTGTGTGGACTCGCTTTCATTATGTTCAACCGCTCGCGAATACTGTTTAGCTCAGCATCAAATACCAACGGTAATGTTGCTGCCATATTGAGTACGGCTGCCGTAGAAGGCGTAATGCGTTTCTCCGGAACGGGTGTCGGCGTTGGATCGGGAGTAGGGTCTGGTTTTGGATTTGGGTCTGGCTTTGGATCGG > NC_000913/2778941‑2779134 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |