| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,661,667 | T→C | R418R (CGT→CGC) | mdtF → | anaerobic multidrug efflux transporter, ArcA‑regulated |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,661,667 | 0 | T | C | 99.5% | 630.9 / ‑4.8 | 183 | R418R (CGT→CGC) | mdtF | anaerobic multidrug efflux transporter, ArcA‑regulated |
| Reads supporting (aligned to +/- strand): ref base T (0/1); new base C (97/85); total (97/86) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.70e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.00e-01 | |||||||||||
Only 100 of 185 total aligned reads displayed.
TCGGTTTCACCATCAACACGTTGACTATGTTCGGGATGGTGCTGGCGATAGGGTTACTGGTGGATGACGCCATCGTGGTGGTGGAGAACGTCGAGCGTGTCATTGCGGAAGATAAGCTACCGCCGAAGGAAGCGACGCATAAATCGATGGGGCAGATCCAACGTGCGCTGGTCGGTATTGCCGTTGTTCTTTCC > NC_000913/3661570‑3661763 | tcggtTTCACCATCAACACGTTGACTATGTTCGGGATGGTGCTGGCGATAGGGTTACTGGTGGATGACGCCATCGTGGTGGTGGAGAACGTCGAGCgcgt < 1:230550/100‑1 (MQ=255) ggtTTCACCATCAACACGTTGACTATGTTCGGGATGGTGCTGGCGATAGGGTTACTGGTGGATGACGCCATCGTGGTGGTGGAGAACGTCGAGCGCGTCa < 1:4924616/100‑1 (MQ=255) ggtTTCACCATCAACACGTTGACTATGTTCGGGATGGTGCTGGCGATAGGGTTACTGGTGGATGACGCCATCGTGGTGGTGGAGAACGTCGAGCGCGTCa > 1:3649168/1‑100 (MQ=255) gtTTCACCATCAACACGTTGAGTATGTTCGGGATGGTTCTGGCGATCGGGTTACTGGTGGATGACCCCATCGTGGTGGTGGAGAACGTCGAGCGCGTCAt < 1:4796988/100‑1 (MQ=25) gtTTCACCATCAACACGTTGACTATGTTCGGGATGGTGCTGGCGATAGGGTTACTGGTGGATGACGCCATCGTGGTGGTGGAGAACGTCGAGCGCGTCAt > 1:4821283/1‑100 (MQ=255) ttCACCATCAACACGTTGACTATGTTCGGGATGGTGCTGGCGATAGGGTTACTGGTGGATGACGCCATCGTGGTGGTGGAGAACGTCGAGCGCGTCATTg > 1:1844620/1‑100 (MQ=255) tCACCATCAACACGTTGACTATGTTCGGGATGGTGCTGGCGATAGGGTTACTGGTGGATGACGCCATCGTGGTGGTGGAGAACGTCGAGCGCGTCATTGc < 1:1939880/100‑1 (MQ=255) cACCATCAACACGTTGACTATGTTCGGGATGGTGCTGGCGATAGGGTTACTGGTGGATGACGCCATCGTGGTGGTGGCGACCGTCGAGCGCGTCATTGCg > 2:734839/1‑100 (MQ=255) cACCATCAACACGTTGACTATGTTCGGGATGGTGCTGGCGATAGGGTTACTGGTGGATGACGCCATCGTGGTGGTGGAGAACGTCGAGCGCGTCATTGCg < 2:4070024/100‑1 (MQ=255) aTCAACACGTTGACTATGTTCGGGATGGTGCTGGCGATAGGGTTACTGGTGGATGACGCCATCGTGGTGGTGGAGAACGTCGAGCGCGTCATTGCGGAAg < 1:4275078/100‑1 (MQ=255) tCAACACGTTGACTATGTTCGGGATGGTGCTGGCGATAGGGTTACTGGTGGATGACGCCATCGTGGTGGTGGAGAACGTCGAGCGCGTCATTGCGGAAGa < 1:833512/100‑1 (MQ=255) aaCACGTTGACTATGTTCGGGATGGTGCTGGCGATAGGGTTACTGGTGGATGACGCCATCGTGGTGGTGGAGAACGTCGAGCGCGTCATTGCGGAAGATa < 2:1175334/100‑1 (MQ=255) aaCACGTTGACTATGTTCGGGATGGTGCTGGCGATAGGGTTACTGGTGGATGACGCCATCGTGGTGGTGGAGAACGTCGAGCGCGTCATTGCGGAAGATa < 1:4238639/100‑1 (MQ=255) acacGTTGACTATGTTCGGGATGGTGCTGGCGATAGGGTTACTGGTGGATGACGCCATCGTGGTGGTGGAGAACGTCGAGCGCGTCATTGCGGAAGATaa > 1:1096273/1‑100 (MQ=255) tGACTATGTTCGGGATGGTGCTGGCGATAGGGTTACTGGTGGATGACGCCATCGTGGTGGTGGAGAACGTCGAGCGCGTCATTGCGGAAGATAAGCTAcn < 1:71/100‑2 (MQ=255) tGACTATGTTCGGGATGGTGCTGGCGATAGGGTTACTGGTGGATGACGCCATCGTGGTGGTGGAGAACGTCGAGCGCGTCATTGCGGAAGATAAGCTAcc > 1:285691/1‑100 (MQ=255) gACTATGTTCGGGATGGTGCTGGCGATAGGGTTACTGGTGGATGACGCCATCGTGGTGGTGGAGAACGTCGAGCGCGTCATTGCGGAAGATAAGCCAccg > 2:3531989/1‑100 (MQ=255) cTATGTTCGGGATGGTGCTGGCGATAGGGTTACTGGTGGATGACGCCATCGTGGTGGTGGAGAACGTCGAGCTCGTCATTGCGGAAGATAAGCTAccgcc < 2:4210248/100‑1 (MQ=255) cTATGTTCGGGATGGTGCTGGCGATAGGGTTACTGGTGGATGACGCCATCGTGGTGGTGGAGAACGTCGAGCGCGTCATTGCGGAAGATAAGCTAccgcc < 1:1058151/100‑1 (MQ=255) tgtgCGGGATGGTGCTGACGATAGGGTTACTGGTGGATGACGCCATCATGGTGGTGGAGAACGTCGAGCGCGTCATTGCGGAAGATAAGCTACCGCCgaa > 2:1011343/1‑100 (MQ=37) tGTTCGGGATGGTGCTGGCGATAGGGTTACTGGTGGATGACGCCATCGTGGTGGTGGAGAACGTCGAGCGCGTCATTGCGGAAGATAAGCTACCGCCgaa < 2:2469952/100‑1 (MQ=255) gTTCGGGATGGTGCTGGCGATAGGGTTACTGGTGGATGACGCCATCGTGGTGGTGGAGAACGTCGAGCGCGTCATTGCGGAAGATAAGCTACCGCCgaag < 2:1732721/100‑1 (MQ=255) gTTCGGGATGGTGCTGGCGATAGGGTTACTGGTGGATGACGCCATCGTGGTGGTGGAGAACGTCGAGCGCGTCATTGCGGAAGATAAGCTACCGCCgaag > 1:2083978/1‑100 (MQ=255) gTTCGGGATGGTGCTGGCGATAGGGTTACTGGTGGATGACGCCATCGTGGTGGTGGAGAACGTCGAGCGCGTCATTGCGGAAGATAAGCTACCGCCgaag < 1:1449587/100‑1 (MQ=255) gTTCGGGATGGTGCTGGCGATAGGGTTACTGGTGGATAACGCCATAGTGGTGGTGGAGAACGTCGCGCGCGTCATTGCGGAAGATAAGCTACCGCCcaag < 2:29348/100‑1 (MQ=25) gggATGGTGCTGGCGATAGGGTTACTGGTGGATGACGCCATCGTGGTGGTGGAGAACGTCGAGCGCGTCATTGCGGAAGATAAGCTACCGCCgaaggaag < 1:2845605/100‑1 (MQ=255) gggATGGTGCTGGCGATAGGGTTACTGGTGGATGACGCCATCGTGGTGGTGGAGAACGTCGAGCGCGTCATTGCGGAAGATAAGCTACCGCCgaaggaag < 1:4453508/100‑1 (MQ=255) ggATGGTGCTGGCGATAGGGTTACTGGTGGATGACGCCATCGTGGTGGTGGAGAACGTCGAGCGCGTCATTGCGGAAGATAAGCTACCGCCGAAGGAAGc < 2:2080141/100‑1 (MQ=255) ggATGGTGCTGGCGATAGGGTTACTGGTGGATGACGCCATCGTGGTGGTGGAGAACGTCGAGCGCGTCATTGCGGAAGATAAGCTACCGCCGAAGGAAGc > 2:687638/1‑100 (MQ=255) gATGGTGCTGGCGATAGGGTTACTGGTGGATGACGCCATCGTGGTGGTGGAGAACGTCGAGCGCGTCATTGCGGAAGATAAGCTACCGCCGAAGGAAGCg < 1:1703204/100‑1 (MQ=255) ggTGCTGGCGATAGGGTTACTGGTGGATGACGCCATCGTGGTGGTGGAGAACGTCGAGCGCGTCATTGCGGAAGATAAGCTACCGCCGAAGGAAGCGACg < 1:257058/100‑1 (MQ=255) ggTGCTGGCGATAGGGTTACTGGTGGATGACGCCATCGTGGTGGTGGAGAACGTCGAGCGCGTCATTGCGGAAGATAAGCTACCGCCGAAGGAAGCGACg < 1:3184966/100‑1 (MQ=255) tGCTGGCGATAGGGTTACTGGTGGATGACGCCATCGTGGTGGTGGAGAACGTCGAGCGCGTCATTGCGGAAGATAAGCTACCGCCGAAGGAAGCGACGCa > 1:3714244/1‑100 (MQ=255) tGCTGGCGATAGGGTTACTGGTGGATGACGCCATCGTGGTGGTGGAGAACGTCGAGCGCGTCATTGCGGAAGATAAGCTACCGCCGAAGGAAGCGACGCa > 1:3714655/1‑100 (MQ=255) gCTGTCGATAGGGGTACTGGTGGATGACGCCAGCGTGGTGGTGGAGAACGTCGAGCGCGTCATTGCGGAAGATAAGCTACCGCTGAAGGGAGCGACGCAt > 2:958260/1‑100 (MQ=37) cTGGCGATAGGGTTACTGGTGGATGACGCCATCGTGGTGGTGGAGAACGTCGAGCGCGTCATTGCGGAAGATAAGCTACCGCCGAAGGAAGCGACGCATa < 1:3013479/100‑1 (MQ=255) gCGATAGGGTTACTGGTGGATGACGCCATCGTGGTGGTGGAGAACGTCGAGCGCGTCATTGCGGAAGATAAGCTACCGCCGAAGGAAGCGACGCATAAAt < 1:1567419/100‑1 (MQ=255) cGATAGGGTTACTGGTGGATGACGCCATCGTGGTGGTGGAGAACGTCGAGCGCGTCATTGCGGAAGATAAGCTACCGCCGAAGGAAGCGACGCATAAATc > 1:3856725/1‑100 (MQ=255) cGATAGGGTTACTGGTGGATGACGCCATCGTGGTGGTGGAGAACGTCGAGCGCGTCATTGCGGAAGATAAGCTACCGCCGAAGGAAGCGACGCATAAATc > 2:1408000/1‑100 (MQ=255) gATAGGGTTACTGGTGGATGACGCCATCGTGGTGGGGGAGAACGTCGAGCGCGTCATTGCGGAAGATAAGCTACCGCCGAAGGAAGCGACGCATAAATCg < 1:3314712/100‑1 (MQ=255) tcgggTCACTGCTGGATGCCCTCCTCGTGCTGGTGGAGACCGTCGAGCGCGTCATTGCGGAAGCTAAGCTACCGCCGAAGGAAGCGACGCATAAATCgct < 2:2789186/98‑3 (MQ=255) aGGGTTACTGGTGGATGACGTCATCGTGGTGGTGGAGAACGTCGAGCGCGTCATTGCGGAAGATAAGCTACCGCCGAAGGAAGCGACGCATAAATCGATg < 1:4917835/100‑1 (MQ=255) gggTTACTGGTGGATGACGCCATCGTGGTGGTGGAGAACGTCGAGCGCGTCATTGCGGAAGATAAGCTACCGCCGAAGGAAGCGACGCATAAATCGATgg < 1:2717897/100‑1 (MQ=255) gggTTACTGGTGGATGACGCCATCGTGGTGGTGGAGAACGTCGAGCGCGTCATTGCGGAAGATAAGCTACCGCCGAAGGAAGCGACGCATAAATCGATgg > 1:2382866/1‑100 (MQ=255) ggTTACTGGTGGATGACGCCATCGTGGTGGTGGAGAACGTCGAGCGCGTCATTGCGGAAGATAAGCTACCGCCGAAGGAAGCGACGCATAAATCGATggg > 1:1238363/1‑100 (MQ=255) ttACTGGTGGATGACGCCCTCGTGGTGGTGGAGAACGTCGAGCGCGTCATTGCGGAAGATAAGCTACCGCCGAAGGAAGCGACGCATAAATCGATGGGGc < 1:4629097/100‑1 (MQ=255) ttACTGGTGGATGACGCCATCGTGGTGGTGGAGAACGTCGAGCGCGTCATTGCGGAAGATAAGCTACCGCCGAAGGAAGCGACGCATAAATCGATGGGGc < 2:2700327/100‑1 (MQ=255) ttACTGGTGGATGACGCCATCGTGGTGGTGGAGAACGTCGAGCGCGTCATTGCGGAAGATAAGCTACCGCCGAAGGAAGCGACGCATAAATCGATGGGGc < 2:1242455/100‑1 (MQ=255) aCTGGTGGATGACGCCATCGTGGTGGTGGAGAACGTCGAGCGCGTCATTGCGGAAGATAAGCTACCGCCGAAGGAAGCGACGCATAAATCGATGGGGCAg > 2:1908941/1‑100 (MQ=255) cTGGTGGATGACGCCATCGTGGTGGTGGAGAACGTCGAGCGCGTCATTGCGGAAGATAAGCTGCCGCCGAAGGAAGCGACGCATAAATCGATGGGGCAGa > 2:4619419/1‑100 (MQ=255) cTGGTGGATGACGCCATCGTGGTGGTGGAGAACGTCGAGCGCGTCATTGCGGAAGATAAGCTACCGCCGAAGGAAGCGACGCATAAATCGATGGGGCAGa > 1:63642/1‑100 (MQ=255) ggtggATGACGCCATCGTGGTGGTGGAGAACGTCGAGCGCGTCATTGCGGAAGATAAGCTACCGCCGAAGGAAGCGACGCATAAATCGATGGGGCAGATc > 2:395935/1‑100 (MQ=255) ggtggATGACGCCATCGTGGTGGTGGAGAACGTCGAGCGCGTCATTGCGGAAGATAAGCTACCGCCGAAGGAAGCGACGCATAAATCGATGGGGCAGATc > 1:917546/1‑100 (MQ=255) ggtggATGACGCCATCGTGGTGGTGGAGAACGTCGAGCGCGTCATTGCGGAAGATAAGCTACCGCCGAAGGAAGCGACGCATAAATCGATGGGGCAGATc > 1:2972074/1‑100 (MQ=255) ggtggATGACGCCATCGTGGTGGTGGAGAACGTCGAGCGCGTCATTGCGGAAGATAAGCTACCGCCGAAGGAAGCGACGCATAAATCGATGGGGCAGATc > 2:3478053/1‑100 (MQ=255) ggtggATGACGCCATCGTGGTGGTGAAGAACGTCGAGCGCGTCATTGCGGAAGATAAGCTACCGCCGAAGGAAGCGACGCATAAATCGATGGGGCAGATc > 2:1411872/1‑100 (MQ=255) gtggATGACGCCATCGTGGTGGTGGAGAACGTCGAGCGCGTCATTGCGGAAGATAAGCTACCGCCGAAGGAAGCGACGCATAAATCGATGGGGCAGATcc < 2:2058312/100‑1 (MQ=255) gATGACGCCATCGTGGTGGTGGAGAACGTCGAGCGCGTCATTGCGGAAGATAAGCTACCGCCGAAGGAAGCGACGCATAAATCGATGGGGCAGATCCAAc > 1:3759667/1‑100 (MQ=255) aTGACGCCATCGTGGTGGTGGAGAACGTCGAGCGCGTCGTTGCGGAAGATAAGCTACCGCCGAAGGAAGCGACGCATAAATCGATGGGGCAGATCCAACg < 1:5109284/100‑1 (MQ=255) aTGACGCCATCGTGGTGGTGGAGAACGTCGAGCGCGTCATTGCGGAAGATAAGCTACCGCCGAAGGAAGCGACGCATAAATCGATGGGGCAGATCCAACg < 1:2749390/100‑1 (MQ=255) aTGACGCCATCGTGGTGGTGGAGAACGTCGAGCGCGTCATTGCGGAAGATAAGCTACCGCCGAAGGAAGCGACGCATAAATCGATGGGGCAGATCCAACg < 2:1536013/100‑1 (MQ=255) aTGACGACATCGTGGTGGTGGAGAACGTCGGGCGCGTCATTGCGGAAGATAAGCTACCGCCGAAGGAAGCGACGCATAAATCGATGGGGCAGATCCAACg < 2:4116023/100‑1 (MQ=255) tGACGCCATCGTGGTGGTGGAGAACGTCGAGCGCGTCATTGCGGAAGATAAGCTACCGCCGAAGGATGCGACGCATAAATCGATGGGGCAGATCCAACGt > 2:3664759/1‑100 (MQ=255) tGACGCCATCGTGGTGGTGGAGAACGTCGAGCGCGTCATTGCGGAAGATAAGCTACCGCCGAAGGAAGCGACGCATAAATCGATGGGGCAGATCCAACGt > 1:3979868/1‑100 (MQ=255) atctccATCGTGGTGGTGGAGAACGTCGAGCGCGTCATTGCGGAAGATAAGCTACCGCCGAAGGAAGCGACGCATAAATCGATGGGGCAGATCCAACGTg < 2:3705695/96‑1 (MQ=255) aCGCCATCGTGGTGGTGGAGAACGTCGAGCGTGTCATTGCGGAAGATAAGCTACCGCCGAAGGAAGCGACGCATAAATCGATGGGGCAGATCCAACGTgc < 1:945181/100‑1 (MQ=255) aCGCCATCGTGGTGGTGGAGAACGTCGAGCGCGTCATTGCGGAAGATAAGCTACCGCCGAAGGAAGCGACGCATAAATCGATGGGGCAGATCCAACGTgc > 2:2131613/1‑100 (MQ=255) cGCCATCGTGGTGGTGGAGAACGTCGAGCGCGTCATTGCGGAAGATAAGCTACCGCCGAAGGAAGCGACGCATAAATCGATGGGGCAGATCCAACGTgcg > 1:498988/1‑100 (MQ=255) ccATCGTGGTGGTGGAGAACGTCGAGCGCGTCATTGCGGAAGATAAGCTACCGCCGAAGGAAGCGACGCATAAATCGATGGGGCAGATCCAACGTGCGCt < 1:2121005/100‑1 (MQ=255) ccATCGTGGTGGTGGAGAACGTCGAGCGCGTCATTGCGGAAGATAAGCTACCGCCGAAGGAAGCGACGCATAAATCGATGGGGCAGATCCAACGTGCGCt > 2:2146651/1‑100 (MQ=255) ccATCGTGGTGGTGGAGAAAGTCGAGCGCGTCATTGCGGAAGATAAGCTACCGCCGAAGGAAGCGACGCATAAATCGATGGGGCAGCTCCAACGTGCGCt > 2:1041643/1‑100 (MQ=255) cATCGTGGTGGTGGAGAACGTCGAGCGCGTCATTGCGGAAGATAAGCTACCGCCGAAGGAAGCGACGCATAAATCGATGGGGCAGATCCAACGTGCGCTg < 1:3542000/100‑1 (MQ=255) aTCGTGGTGGTGGAGAACGTCGAGCGCGTCATTGCGGAAGATAAGCTACCGCCGAAGGAAGCGACGCATAAATCGATGGGGCAGATCCAACGTGCGCTgg < 2:4819803/100‑1 (MQ=255) aTCGCGGTGGTGGCGAACGTCGAGCGCGTCATTGCGGAAGATAAGCTACCGCCGAAGGAAGCGACGCATAAATCGATGGGGCAGATCCAACGTGCGCTgg > 2:4234084/1‑100 (MQ=255) gtggtggtgGAGAACGTCGAGCGCGTCATTGCGGAAGATAAGCTACCGCCGAAGGAAGCGACGCATAAATCGATGGGGCAGATCCAACGTGCGCTGGTCg > 1:3882867/1‑100 (MQ=255) tggtggtggAGAACGTCGAGCGCGTCATTGCGGAAGATAAGCTACCGCCGAAGGAAGCGACGCATAAATCGATGGGGCAGATCCAACGTGCGCTGGTCgg < 1:2899656/100‑1 (MQ=255) tggtggtggAGAACGTCGAGCGCGTCATTGCGGAAGATAAGCTACCGCCGAAGGAAGCGACGCATAAATCGATGGGGCAGATCCAACGTGCGCTGGTCgg < 2:4947812/100‑1 (MQ=255) tggtggtggAGAACGTCGAGCGCGTCATTGCGGAAGATAAGCTACCGCCGAAGGAAGCGACGCATAAATCGATGGGGCAGATCCAACGTGCGCTGGTCgg < 2:3118944/100‑1 (MQ=255) ggtggtggAGAACGTCGAGCGCGTCATTGCGGAAGATAAGCTACCGCCGAAGGAAGCGACGCATAAATCGATGGGGCAGATCCAACGTGCGCTGGTCGGt < 1:2490306/100‑1 (MQ=255) gtggtggAGAACGTCGAGCGCGTCATTGCGGAAGATAAGCTACCGCCGAAGGAAGCGACGCATAAATCGATGGGGCAGATCCAACGTGCGCTGGTCGGTa > 2:2234056/1‑100 (MQ=255) tggtggAGAACGTCGAGCGCGTCATTGCGGAAGATAAGCTACCGCCGAAGGAAGCGACGCATAAATCGATGGGGCAGATCCAACGTGCGCTGGTCGGTAt < 2:2358228/100‑1 (MQ=255) tggtggAGAACGTCGAGCGCGTCATTGCGGAAGATAAGCTACCGCCGAAGGAAGCGACGCATAAATCGATGGGGCAGATCCAACGTGCGCTGGTCGGTAt < 2:1524040/100‑1 (MQ=255) tggtggAGAACGTCGAGCGCGTCATTGCGGAAGATAAGCTACCGCCGAAGGAAGCGACGCATAAATCGATGGGGCAGATCCAACGTGCGCTGGTCGGTAt > 1:3389728/1‑100 (MQ=255) tggtggAGAACGTCGAGCGCGTCATTGCGGAAGATAAGCTACCGCCGAAGGAAGCGACGCATAAATCGATGGGGCAGATCCAACGTGCGCTGGTCGGTAt < 1:1144148/100‑1 (MQ=255) ggtggAGAACGTCGAGCGCGTCATTGCGGAAGATAAGCTACCGCCGAAGGAAGCGACGCATAAATCGATGGGGCAGATCCAACGTGCGCTGGTCGGTAtt > 2:2677747/1‑100 (MQ=255) tggAGAACGTCGAGCGCGTCATTGCGGAAGATAAGCTACCGCCGAAGGAAGCGACGCATAAATCGATGGGGCAGATCCAACGTGCGCTGGTCGGTATTGc > 2:3888138/1‑100 (MQ=255) gagaACGTCGAGCGCGTCATTGCGGAAGATAAGCTACCGCCGAAGGAAGCGACGCATAAATCGATGGGGCAGATCCAACGTGCGCTGGTCGGTATTGCCg < 2:3014147/100‑1 (MQ=255) agaACGTCGAGCGCGTCATTGCGGAAGATAAGCTACCGCCGAAGGAAGCGACGCATAAATCGATGGGGCAGATCCAACGTGCGCTGGTCGGTATTGCCgt > 1:2278232/1‑100 (MQ=255) gaACGTCGAGCGCGTCATTGCGGAAGATAAGCTACCGCCGAAGGAAGCGACGCATAAATCGATGGGGCAGATCCAACGTGCGCTGGTCGGTATTGCCgtt > 1:105680/1‑100 (MQ=255) gaACGTCGAGCGCGTCATTGCGGAAGATAAGCTACCGCCGAAGGAAGCGACGCATAAATCGATGGGGCAGATCCAACGTGCGCTGGTCGGTATTGCCgtt > 2:1052135/1‑100 (MQ=255) aaCGTCGAGCGCGTCATTGCGGAAGAGAAGCTACCGCAGAAGGAAGCGACGCATAAATCGATGGGGCAGATCCAACGTGCGCTGGTCGGTATTGCCgttg < 2:4611219/100‑1 (MQ=255) aCGTCGAGCGCGTCATTGCGGAAGATAAGCTACCGCCGAAGGAAGGGACGCATAAATCGATGGGGCAGATCCAACGTGCGCTGGTCGGTATTGCCgttgt < 2:299700/100‑1 (MQ=255) cGTCGAGCGCGTCATTGCGGAAGATAAGCTACCGCCGAAGGAAGCGACGCATAAATCGATGGGGCAGATCCAACGTGCGCTGGTCGGTATTGCCgttgtt > 1:3282736/1‑100 (MQ=255) gTCGAGCGCGTCATTGCGGAAGATAAGCTACCGCCGAAGGAAGCGACGCATAAATCGATGGGGCAGATCCAACGTGCGCTGGTCGGTATTGCCGTTGTTc < 1:473935/100‑1 (MQ=255) aGCGCGTCATTGCGGAAGATAAGCTACCGCCGAAGGAAGCGACGCATAAATCGATGGGGCAGATCCAACGTGCGCTGGTCGGTATTGCCGTTGTTCTTTc > 2:244122/1‑100 (MQ=255) aGCGCGTCATTGCGGAAGATAAGCTACCGCCGAAGGAAGCGACGCATAAATCGATGGGGCAGATCCAACGTGCGCTGGTCGGTATTGCCGTTGTTCTTTc < 2:1953301/100‑1 (MQ=255) aGCGCGTCATTGCGGAAGATAAGCTACCGCCGAAGGAAGCGACGCATAAATCGATGGGGCAGATCCAACGTGCGCTGGTCGGTATTGCCGTTGTTCTTTc > 1:572362/1‑100 (MQ=255) aGCGCGTCATTGCGGAAGATAAGCTACCGCCGAAGGAAGCGACGCATAAATCGATGGGGCAGATCCAACGTGCGCTGGTCGGTATTGCCGTTGTTCTTTc < 1:4698749/100‑1 (MQ=255) aGCGCGTCAATGCGGAAAATAAGCTAACGCCGAAGGAAGCGACGCATAAATCGCTGGGGCAGATCCAACGTGCGCTGGTCGGTATTCGCGTTGTTCTTTc < 2:193077/100‑1 (MQ=255) gcgcGTCATTGCGGAAGATAAGCTACCGCCGAAGGAAGCGACGCATAAATCGATGGGGCAGATCCAACGTGCGCTGGTCGGTATTGCCGTTGTTCTTTcc > 1:1381165/1‑100 (MQ=255) | TCGGTTTCACCATCAACACGTTGACTATGTTCGGGATGGTGCTGGCGATAGGGTTACTGGTGGATGACGCCATCGTGGTGGTGGAGAACGTCGAGCGTGTCATTGCGGAAGATAAGCTACCGCCGAAGGAAGCGACGCATAAATCGATGGGGCAGATCCAACGTGCGCTGGTCGGTATTGCCGTTGTTCTTTCC > NC_000913/3661570‑3661763 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |