| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,663,901 | T→C | T240A (ACC→GCC) | gadW ← | transcriptional activator of gadA and gadBC; repressor of gadX |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,663,901 | 0 | T | C | 99.5% | 749.7 / ‑4.8 | 215 | T240A (ACC→GCC) | gadW | transcriptional activator of gadA and gadBC; repressor of gadX |
| Reads supporting (aligned to +/- strand): ref base T (1/0); new base C (108/106); total (109/106) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.64e-01 | |||||||||||
Only 100 of 215 total aligned reads displayed.
AGCCGGTAGCCCGGCAGAAATCATCAGGGAAGAGTTTCACATGAAGCAGGTGTGAGATCCTGACCAATATTCAAATGCGAAATATGTCAGGAAAAGGTACCTGGCGAATGTTGCGCAAACTGATGTGGCGTTACACCATAATATTGTCGAAATGTGTTTATAAAGTACGATGTACTGCTATAGCCACATTTTTC > NC_000913/3663804‑3663997 | aGCCGGTAGCCCGGCAGAAATCATCAGGGAAGAGTTTCACATGAAGCAGGTGTGAGATCCTGACCAATATTCAAATGCGAAATATGTCAGGAAAAGGCAc < 2:1124844/100‑1 (MQ=255) gCCGGTAGCCCGGCAGAAATCATCAGGGAAGAGTTTCACATGAAGCAGGTGTGAGATCCTGACCAATATTCAAATGCGAAATATGTCAGGAAAAGGCAcc > 1:4559122/1‑100 (MQ=255) ccGGTAGCCCGGCAGAAATCATCAGGGAAGAGTTTCACATGAAGCAGGTGTGAGATCCTGACCAATATTCAAATGCGAAATATGTCAGGAAAAGGCACCt > 1:1908980/1‑100 (MQ=255) ggTAGCCCGGCAGAAATCATCAGGGAAGAGTTTCACATGAAGCAGGTGTGAGATCCTGACCAATATTCAAATGCGAAATATGTCAGGAAAAGGCACCTgg < 2:2798434/100‑1 (MQ=255) ggTAGCCCGGCAGAAATCATCAGGGAAGAGTTTCACATGAAGCAGGTGTGAGATCCTGACCAATATTCAAATGCGAAATATGTCAGGAAAAGGCACCTgg > 1:3927195/1‑100 (MQ=255) gCCCGGCAGAAATCATCAGGGAAGAGTTTCACATGAAGCAGGTGTGAGATCCTGACCAATATTCAAATGCGAAATATGTCAGGAAAAGGCACCTGGCGaa > 2:4679620/1‑100 (MQ=255) gCCCGGCAGAAATCATCAGGGAAGAGTTTCACATGAAGCAGGTGTGAGATCCTGACCAATATTCAAATGCGAAATATGTCAGGAAAAGGCACCTGGCGaa < 1:4928643/100‑1 (MQ=255) cccGGCAGAAATCATCAGGGAAGAGTTTCACATGAAGCAGGTGTGAGATCCTGACCAATATTCAAATGCGAAATATGTCAGGAAAAGGCACCTGGCGAAt < 1:4014685/100‑1 (MQ=255) gCAGAAATCATCAGGGAAGAGTTTCACATGAAGCAGGTGTGAGATCCTGACCAATATTCAAATGCGAAATATGTCAGGAAAAGGCACCTGGCGAATGTTg > 2:2450458/1‑100 (MQ=255) cAGAAATCATCAGGGAAGAGTTTCACATGAAGCAGGTGTGAGATCCTGACCAATATTCAAATGCGAAATATGTCAGGAAAAGGCACCTGGCGAATGTTgc < 2:4920749/100‑1 (MQ=255) cAGAAATCATCAGGGAAGAGTTTCACATGAAGCAGGTGTGAGATCCTGACCAATATTCAAATGCGAAATATGTCAGGAAAAGGCACCTGGCGAATGTTgc < 2:1228132/100‑1 (MQ=255) aaaTCATCAGGGAAGAGTTTCACATGAAGCAGGTGTGAGATCCTGACCAATATTCAAATGCGAAATATGTCAGGAAAAGGCACCTGGCGAATGTTGCGCa < 1:1610255/100‑1 (MQ=255) tcatcaGGGACGAGTTTCACATGAAGCAGGTGTGAGATCCTGACCCGTGTCCACATGCACCCTATGTCAGGGAAAGGCCCCTGGCGTATGCTgcgcgacc > 2:2724818/1‑96 (MQ=255) tcatcaGGGAAGAGTTTCACATGAAGCAGGTGTGAGATCCTGACCAATATTCAAATGCGAAATATGTCAGGAAAAGGCACCTGGCGAATGTTGCGCAAAc > 1:4936654/1‑100 (MQ=255) caGGGAAGAGTTTCACATGAAGCAGGTGTGAGATCCTGACCAATATTCAAATGCGAAATATGTCAGGAAAAGGCACCTGGCGAATGTTGCGCAAACTGAt > 2:894346/1‑100 (MQ=255) aGGGAAGAGTTTCACATGAAGCAGGTGTGAGATCCTGACCAATATTCAAATGCGAAATATGTCAGGAAAAGGCACCTGGCGAATGTTGCGCAAACTGAtg < 2:4776557/100‑1 (MQ=255) gAAGAGTTTCACATGAAGCAGGTGTGAGATCCTGACCAATATTCAAATGCGAAATATGTCAGGAAAAGGCACCTGGCGAATGTTGCGCAAACTGATGTgg > 2:1990332/1‑100 (MQ=255) aaGAGTTTCACATGAAGCAGGTGTGAGATCCTGACCAATATTCAAATGCGAAATATGTCAGGAAAAGGCACCTGGCGAATGTTGCGCAAACTGATGTGGc < 2:3277264/100‑1 (MQ=255) gagTTTCACATGAAGCAGGTGTGAGATCCTGACCAATATTCAAATGCGAAATATGTCAGGAAAAGGCACCTGGCGAATGTTGCGCAAACTGATGTGGCGt < 2:319996/100‑1 (MQ=255) gTTTCACATGAAGCAGGTGTGAGATCCTGACCAATATTCAAATGCGAAATATGTCAGGAAAAGGCACCTGGCGAATGTTGCGCAAACTGATGTGGCGTTa > 2:819656/1‑100 (MQ=255) gTTTCACATGAAGCAGGTGTGAGATCCTGACCAATATTCAAATGCGAAATATGTCAGGAAAAGGCACCTGGCGAATGTTGCGCAAACTGATGTGGCGTTa > 1:2796930/1‑100 (MQ=255) ttCACATGAAGCAGGTGTGAGATCCTGACCAATATTCAAATGCGAAATATGTCAGGAAAAGGCACCTGGCGAATGTTGCGCAAACTGATGTGGCGTTaca > 1:1420704/1‑100 (MQ=255) tCACATGAAGCAGGTGTGAGATCCTGACCAATATTCAAATGCGAAATATGTCAGGAAAAGGCACCTGGCGAATGTTGCGCAAACTGATGTGGCGTTacac > 2:552911/1‑100 (MQ=255) cacaTGAAGCAGGTGTGAGATCCTGACCAATATTCAAATGCGAAATATGTCAGGAAAAGGCACCTGGCGAATGTTGCGCAAACTGATGTGGCGTTCCAcc > 2:4831778/1‑100 (MQ=255) cacaTGAAGCAGGTGTGAGATCCTGACCAATATTCAAATGCGAAATATGTCAGGAAAAGGCACCTGGCGAATGTTGCGCAAACTGATGTGGCGTTACAcc > 2:1451376/1‑100 (MQ=255) cacaTGAAGCAGGTGTGAGATCCTGACCAATATTCAAATGCGAAATATGTCAGGAAAAGGCACCTGGCGAATGTTGCGCAAACTGATGTGGCGTTACAcc > 1:2353107/1‑100 (MQ=255) cacaTGAAGCAGGTGTGAGATCCTGACCAATATTCAAATGCGAAATATGTAAGGAAAAGGCACCTGGCGAATGTTGCGCAAACTGATGTGGCGTTACAcc > 1:2870005/1‑100 (MQ=255) caTGAAGCAGGTGTGAGATCCTGACCAATATTCAAATGCGAAATATGTCAGGAAAAGGCACCTGGCGAATGTTGCGCAAACTGATGTGGCGTTACACCat < 1:754645/100‑1 (MQ=255) caTGAAGCAGGTGTGAGATCCTGACCAATATTCAAATGCGAAATATGTCAGGAAAAGGCACCTGGCGAATGTTGCGCAAACTGATGTGGCGTTACACCat > 1:3414245/1‑100 (MQ=255) caTGAAGCAGGTGTGAGATCCTGACCAATATTCAAATGCGAAATATGTCAGGAAAAGGCACCTGGCGAATGTTGCGCAAACTGATGTGGCGTTACACCat > 2:741413/1‑100 (MQ=255) aTGAAGCAGGTGTGAGATCCTGACCAATATTCAAATGCGAAATATGTGAGGAAAAGGCACCTGGCGAATGTTGCGCAAACTGATGTGGCGTTACACCata > 2:4375804/1‑100 (MQ=255) tGAAGCAGGTGTGAGATCCTGGCCAAGATTCACATGCGAAAGATGTCAGGAAAAGGCACCTGGCGAATGTTGCGCAAAATGATGTGGCGTTACACCataa < 1:2062589/100‑1 (MQ=255) tGAAGCAGGTGTGAGATCCTGACCAATATTCAAATGCGAAATATGTCAGGAAAAGGCACCTGGCGAATGTTGCGCAAACTGATGTGGCGTTACACCataa < 2:3655038/100‑1 (MQ=255) gAAGCAGGTGTGAGATCCTGACCAATATTCAAATGCGAAATATGTCAGGAAAAGGCACCTGGCGAATGTTGCGCAAACTGATGTGGCGTTACACCataat < 2:4468512/100‑1 (MQ=255) gAAGCAGGTGAGAGATCCTGACCAATATACAAATGCGAAATATGTCAGGAAAAGGCACCTGGCGAATGTTGCGCAAACTGATGTGGCGTTACACCataat < 2:3004984/100‑1 (MQ=255) aaGCAGGTGTGAGATCCTGACCAATATTCAAATGCGAAATATGTCAGGAAAAGGCACCTGGCGAATGTTGCGCAAACTGATGTGGCGTTACACCataata < 1:1029058/100‑1 (MQ=255) ggTGTGAGATCCTGACCAATATTCAAATGCGAAATATGTCAGGAAAAGGCACCTGGCGAATGTTGCGCAAACTGATGTGGCGTTACACCATAATATTGTc > 2:773510/1‑100 (MQ=255) ggTGTGAGATCCTGACCAATATTCAAATGCGAAATATGTCAGGAAAAGGCACCTGGCGAATGTTGCGCAAACTGATGTGGCGTTACACCATAATATTGTc > 1:795224/1‑100 (MQ=255) cgtgtGAGATCCTGACCAATATTCAAATGCGAAAAAAAAAAAAAAAAGGCACCTGGCGAATGTTGCGCAAACTGATGTGGCGTTACACCATAATATTGTc < 2:81462/99‑1 (MQ=255) gtgtGAGATCCTGACCAATATTCAAATGCGAAATATGTCAGGAAAAGGCACTTGCCGAATGTTGCGCAAACTGATGTGGCGTTACACCATAATATTATCg > 2:4002994/1‑100 (MQ=255) gtgtGAGATCCTGACCAATATTCAAATGCGAAATATGTCAGGAAAAGGCACCTGGCGAATGTTGCGCAAACTGATGTGGCGTTACACCATAATATTGTCg > 2:2952114/1‑100 (MQ=255) gtgtGAGATCCTGACCAATATTCAAATGCGAAATATGTCAGGAAAAGGCACCTGGCGAATGTTGCGCAAACTGATGTGGCGTTACACCATAATATTGTCg < 2:2765585/100‑1 (MQ=255) gtgtGAGATCCTGACCAATATTCAAATGCGAAATATGTCAGGAAAAGGCACCTGGCGAATGTTGCGCAAACTGATGTGGCGTTACACCATAATATTGTCg < 1:399318/100‑1 (MQ=255) gtgtGAGAGCCTGACCAATATTCAAATGCGAAATATGTCAGGAAAAGGCACCTGGCGAATGTTGCGCAAACTGATGTGGCGTTACACCATAATATTGTCg < 2:2035906/100‑1 (MQ=255) tgtgAGATCCTGACCAATATTCAAATGCGAAATATGTCAGGAAAAGGCACCTGGCGAATGTTGCGCAAACTGATGTGGCGTTACACCATAATATTGTCGa < 2:1341254/100‑1 (MQ=255) gtgAGATCCTGACCAATATTCAAATGCGAAATATGTCAGGAAAAGGCACCTGGCGAATGTTGCGCAAACTGATGTGGCGTTACACCATAATATTGTCGaa > 2:3050052/1‑100 (MQ=255) gtgAGATCCTGACCAATATTCAAATGCGAAATATGTCAGGAAAAGGCACCTGGCGAATGTTGCGCAAACTGATGTGGCGTTACACCATAATATTGTCGaa > 2:1622746/1‑100 (MQ=255) tgAGATCCTGACCAATATTCAAATGCGAAATATGTCAGGAAAAGGCACCTGGCGAATGTTGCGCAAACTGATGTGGCGTTACACCATAATATTGTCGaaa < 2:2330100/100‑1 (MQ=255) gagaTCCTGACCAATATTCAAATGCGAAATATGTCAGGAAAAGGCACCTGGCGAATGTTGCGCAAACTGATGTGGCGTTACACCATAATATTGTCGAAAt > 1:3552124/1‑100 (MQ=255) agaTCCTGACCAATATTCAAATGCGAAATATGTCAGGAAAAGGCACCTGGCGAATGTTGCGCAAACTGATGTGGCGTTACACCATAATATTGTCGAAAtg < 1:2985622/100‑1 (MQ=255) agaTCCTGACCAATATTCAAATGCGAAATATGTCAGGAAAAGGCACCTGGCGAATGTTGCGCAAACTGATGGGGCGTTACACCATAATATTGTCGAAAtg < 2:2202977/100‑1 (MQ=255) tCCTGACCAATATTCAAATGCGAAATATGTCAGGAAAAGGCACCTGGCGAATGTTGCGCAAACTGATGTGGCGTTACACCATAATATTGTCGAAATgtgt > 2:3385906/1‑100 (MQ=255) ccTGACCAATATTCAAATGCGAAATATGTCAGGAAAAGGCACCTGGCGAATGTTGCGCAAACTGATGTGGCGTTACACCATAATATTGTCGAAATGTGtt < 2:3454732/100‑1 (MQ=255) gACCAATATTCAAATGCGAAATATGTCAGGAAAAGGTACCTGGCGAATGTTGCGCAAACTGATGTGGCGTTACACCATAATATTGTCGAAATGTGTTtat > 1:99572/1‑100 (MQ=255) aCCAATATTCAAATGCGAAATATGTCAGGAAAAGGCACCTGGCGAATGTTGCGCAAACTGATGTGGCGTTACCCCATAATATTGTCGAAATGTGTTtata < 2:2393745/100‑1 (MQ=255) aCCAATATTCAAATGCGAAATATGTCAGGAAAAGGCACCTGGCGAATGTTGCGCAAACTGATGTGGCGTTACACCATAATATTGTCGAAATGTGTTtata < 1:1127207/100‑1 (MQ=255) tcAATATTCAAATGCGAAATATGTCAGGAAAAGGCACCTGGCGAATGTTGCGCAAACTGATGTGGCGTTACACCATAATATTGTCGAAATGTGTTTATaa < 2:2660826/99‑1 (MQ=255) ccAATATTCAAATGCGAAATATGTCAGGAAAAGGCACCTGGCGAATGTTGCGCAAACTGATGTGGCGTTACACCATAATATTGTCGAAATGTGTTTATaa > 2:141503/1‑100 (MQ=255) ccAATATTCAAATGCGAAATATGTCAGGAAAAGGCACCTGGCGAATGTTGCGCAAACTGATGTGGCGTTACACCATAATATTGTCGAAATGTGTTTATaa < 1:502322/100‑1 (MQ=255) cAATATTCAAATGCGAAATATGTCAGGAAAAGGCACCTGGCGAATGTTGCGCAAACTGATGTGGCGTTACACCATAATATTGTCGAAATGTGTTTATaaa > 1:3439199/1‑100 (MQ=255) cAATATTCAAATGCGAAATATGTCAGGAAAAGGCACCTGGCGAATGTTGCGCAAACTGATGTGGCGTTACACCATAATATTGTCGAAATGTGTTTATaaa > 1:2691361/1‑100 (MQ=255) atatTCAAATGCGAAATATGTCAGGAAAAGGCACCTGGCGAATGTTGCGCAAACTGATGTGGCGTTACACCATAATATTGTCGAAATGTGTTTATAAAGt > 1:3289193/1‑100 (MQ=255) atatTCAAATGCGAAATATGTCAGGAAAAGGCACCTGGCGAATGTTGCGCAAACTGATGTGGCGTTACACCATAATATTGTCGAAATGTGTTTATAAAGt < 2:1819263/100‑1 (MQ=255) atatTCAAATGCGAAATATGTCAGGAAAAGGCACCTGGCGAATGTTGCGCAAACTGATGTGGCGTTACACCATAATATTGTCGAAATGTGTTTATAAAGt < 2:3713186/100‑1 (MQ=255) tatTCAAATGCGAAATATGTCAGGAAAAGGCACCTGGCGAATGTTGCGCAAACTGATGTGGCGTTACACCATAATATTGTCGAAATGTGTTTATAAAGTa < 2:1582877/100‑1 (MQ=255) nttCAAATGCGAAATATGTCAGGAAAAGGCACCTGGCGAATGTTGCGCAAACTGATGTGGCGTTACACCATAATATTGTCGAAATGTGTTTATAAAGTAc > 1:4831374/2‑100 (MQ=255) atTCAAATGCGAAATATGTCAGGAAAAGGCACCTGGCGAATGTTGCGCAAACTGATGTGGCGTTACACCATAATATTGTCGAAATGTGTTTATAAAGTAc > 1:2226124/1‑100 (MQ=255) ttCAAATGCGAAATATGTCAGGAAAAGGCACCTGGCGAATGTTGCGCAAACTGATGTGGCGTTACACCATAATATTGTCGAAATGTGTTTATAAAGTACg > 1:4702327/1‑100 (MQ=255) ttCAAATGCGAAATATGTCAGGAAAAGGCACCTGGCGAATGTTGCGCAAACTGATGTGGCGTTACACCATAATATTGTCGAAATGTGTTTATAAAGTACg < 1:143265/100‑1 (MQ=255) ttCAAATGCGAAATATGTCAGGAAAAGGCACCTGGCGAATGTTGCGCAAACTGATGTGGCGTTACACCATAATATTGTCGAAATGTGTTTATAAAGTACg > 1:1344038/1‑100 (MQ=255) naaaTGCGAAATATGTCAGGAAAAGGCACCTGGCGAATGTTGCGCAAACTGATGTGGCGTTACACCATAATATTGTCGAAATGTGTTTATAAAGTACGAt > 1:516427/2‑100 (MQ=255) cAAATGCGAAATATGTCAGGAAAAGGCACCTGGCGAATGTTGCGCAAACTGATGTGGCGTTACACCATAATATTGTCGAAATGTGTTTATAAAGTACGAt > 2:1940418/1‑100 (MQ=255) cAAATGCGAAATATGTCAGGAAAAGGCACCTGGCGAATGTTGCGCAAACTGATGTGGCGTTACACCATAATATTGTCGAAATGTGTTTATAAAGTACGAt < 2:3876928/100‑1 (MQ=255) aaaTGCGAAATATGTCAGGAAAAGGCACCTGGCGAATGTTGCGCAAACTGATGTGGCGTTACACCATAATATTGTCGAAATGTGTTTATAAAGTACGATg > 2:3149977/1‑100 (MQ=255) gCGAAATATGTCAGGAAAAGGCACCTGGCGAATGTTGCGCAAACTGATGTGGCGTTACACCATAATATTGTCGAAATGTGTTTATAAAGTACGATGTACt < 1:1676134/100‑1 (MQ=255) gCGAAATATGTCAGGAAAAGGCACCTGGCGAATGTTGCGCAAACTGATGTGGCGTTACACCATAATATTGTCGAAATGTGTTTATAAAGTACGATGTACt < 1:963929/100‑1 (MQ=255) cGAAATATGTCAGGAAAAGGCACCTGGCGAATGTTGCGCAAACTGATGTGGCGTTACACCATAATATTGTCGAAATGTGTTTATAAAGTACGATGTACTg < 1:3193555/100‑1 (MQ=255) cGAAATATGTCAGGAAAAGGCACCTGGCGAATGTTGCGCAAACTGATGTGGCGTTAAACCATACTATTGTCGAAATGTGTTTATAAAGTACGATGTACTg < 1:263579/100‑1 (MQ=255) gAAATATGTCAGGAAAAGGCGCCTGGCGCATGTTGCGCAAAGTGATGTGGCGTTACACCATAATATTGTCGAAATGTGTTTATAAAGTACGATGTACTGc < 2:1228966/100‑1 (MQ=255) gAAATATGTCAGGAAAAGGCACCTGGCGAATGTTGCGCAAACTGATGTGGCGTTACACCATAATATTGTCGAAATGTGTTTATAAAGTACGATGTACTGc < 2:3513154/100‑1 (MQ=255) gAAATATGTCAGGAAAAGGCACCTGGCGAATGTTGCGCAAACTGATGTGGCGTTACACCATAATATTGTCGAAATGTGTTTATAAAGTACGATGTACTGc < 2:1719765/100‑1 (MQ=255) aaaTATGTCAGGAAAAGGCACCTGGCGAATGTTGCGCAAACTGATGTGGCGTTACACCATAATATTGTCGAAATGTGTTTATAAAGTACGATGTACTGCt > 1:215209/1‑100 (MQ=255) aaaTATGTCAGGAAAAGGCACCTGGCGAATGTTGCGCAAACTGATGTGGCGTTACACCATAATATTGTCGAAATGTGTTTATAAAGTACGATGTACTGCt > 1:598975/1‑100 (MQ=255) aaaTATGACATCAAAATGCACCCGGCAGATGGTGCGCAAGCGGATGTGTCGTTACACCATAATATTGTCGAAATGTGTTTATAAAGTACGATGTACTGCt < 1:1274455/100‑1 (MQ=255) tatGTCAGGAAAAGGCACCTGGCGAATGTTGCGCAAACTGATGTGGCGTTACACCATAATATTGTCGAAATGTGTTTATAAAGTACGATGTACTGCtata > 1:3826545/1‑100 (MQ=255) atGTCAGGAAAAGGCACCTGGCGAATGTTGCGCAAACTGATGTGGCGTTACACCATAATATTGTCGAAATGTGTTTATAAAGTACGATGTACTGcagatc > 1:725836/1‑95 (MQ=255) atGTCAGGAAAAGGCACCTGGCGAATGTTGCGCAAACTGATGTGGCGTTACACCATAATATTGTCGAAATGTGTTTATAAAGTACGATGTACTGCTATAg > 1:4603457/1‑100 (MQ=255) tGTCAGGAAAAGGCACCTGGCGAATGTTGCGCAAACTGATGTGGCGTTACACCATAATATTGTCGAAATGTGTTTATAAAGTACGATGTACTGCTATAGc < 1:282677/100‑1 (MQ=255) ttCAGGAAAAGGCACCTGGCGAATGTTGCGCAAACTGATGTGGCGTTACACCATAATATTGTCGAAATGTGTTTATAAAGTACGATGTACTGCTATAGcc < 1:3563963/99‑1 (MQ=255) gTCAGGAAAAGGCACCTGGCGAATGTTGCGCAAACTGATGTGGCGTTACACCATAATATTGTCGAAATGTGTTTATAAAGTACGATGTACTGCTATAGcc < 1:4046740/100‑1 (MQ=255) gTCAGGAAAAGGCACCTGGCGAATGTTGCGCAAACTGATGTGGCGTTACACCATAATATTGTCGAAATGTGTTTATAAAGTACGATGTACTGCTATAGcc > 1:10745/1‑100 (MQ=255) tCAGGAAAAGGCACCTGGCGAATGTTGCGCAAACTGATGTGGCGTTACACCATAATATTGTCGAAATGTGTTTATAAAGTACGATGTACTGCTATAGCca > 2:3524895/1‑100 (MQ=255) cAGGAAAAGGCACCTGGCGAATGTTGCGCAAACTGATGTGGCGTTACACCATAATATTGTCGAAATGTGTTTATAAAGTACGATGTACTGCTATAGCcac > 2:3395698/1‑100 (MQ=255) cAGGAAAAGGCACCTGGCGAATGTTGCGCAAACTGATGTGGCGTTACACCATAATATTGTCGAAATGTGTTTATAAAGTACGATGTACTGCTATAGCcac < 1:1770515/100‑1 (MQ=255) cAGGAAAAGGCACCTGGCGAATGTTGCGCAAACTGATGTGGCGTTACACCATAATATTGTCGAAATGTGTTTATAAAGTACGATGTACTGCTATAGCcac > 1:4276698/1‑100 (MQ=255) aGGAAAAGGCACCTGGCGAATGTTGCGCAAACTGATGTGGCGTTACACCATAATATTGTCGAAATGTGTTTATAAAGTACGATGTACTGCTATAGCcaca < 1:4428210/100‑1 (MQ=255) ggAAAAGGCACCTGGCGAATGTTGCGCAAACTGATGTGGCGTTACACCATAATATTGTCGAAATGTGTTTATAAAGTACGATGTACTGCTATAGCCACAt > 2:4584767/1‑100 (MQ=255) ggAAAAGGCACCTGGCGAATGTTGCGCAAACTGATGTGGCGTTACACCATAATATTGTCGAAATGTGTTTATAAAGTACGATGTACTGCTATAGCCACAt > 2:3342302/1‑100 (MQ=255) gAAAAGGCACCTGGCGAATGTTGCGCAAACTGATGTGGCGTTACACCATAATATTGTCGAAATGTGTTTATAAAGTACGATGTACTGCTATAGCCACAtt < 1:1967006/100‑1 (MQ=255) aaaaGGCACCTGGCGAATGTTGCGCAAACTGATGTGGCGTTACACCATAATATTGTCGAAATGTGTTTATAAAGTACGATGTACTGCTATAGCCACAttt < 1:3147347/100‑1 (MQ=255) | AGCCGGTAGCCCGGCAGAAATCATCAGGGAAGAGTTTCACATGAAGCAGGTGTGAGATCCTGACCAATATTCAAATGCGAAATATGTCAGGAAAAGGTACCTGGCGAATGTTGCGCAAACTGATGTGGCGTTACACCATAATATTGTCGAAATGTGTTTATAAAGTACGATGTACTGCTATAGCCACATTTTTC > NC_000913/3663804‑3663997 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |