Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 2,826,310 | 0 | T | G | 32.5% | 195.8 / 10.7 | 116 | V160G (GTG→GGG) | srlA | glucitol/sorbitol‑specific enzyme IIC component of PTS |
Reads supporting (aligned to +/- strand): ref base T (44/33); new base G (36/1); total (81/35) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 2.37e-06 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Rejected as consensus: Frequency below/above cutoff threshold. |
Only 100 of 116 total aligned reads displayed.
TCCGATGACCCTAAGCCTGGGTCGCTTTATGCCGGAAAAGTACAAACCCAGCTACTACGCGGCGGCCTCTTATAGCTGCCACTCAATGAATGGCCTCTTCCCCCAT‑ATCAACCCTGGCGAAC‑TG‑TTTGTTTATCTTGGCATTGCCAGCGG‑TCTGACAA‑CGCTGAACCTGCCACTTGGCCCAC‑TGGCGGTGAGTTATCTGCTGGTTGGTCTGGTCACCAATTTCTTCCGCGGCTGGGTGACCGATCTGACCACCGCCATTTTTGAGAAAAAGATGGGCA‑TTCAACTTGAACAA‑AAAGTTCACCTGGCAGGAGCAACATCATGACGCATATTCGGATCGAAAAAGGAACGGGTGGCTGGGGCGGCC‑CGCTTGAGCTGAAAGCCACGCCGGGAAAAAAAATCGTCTATATCACCGCCGGTACCCGGCCTGCGATTGTTGACAAACTGGCACAGCTTACTGGCTGGCAGGCTATTGAC > NC_000913/2826074‑2826547 | tCCGATGACCCTAAGCCTGGGTCGCTTTATGCCGGAAAAGTACAAACCCAGCTACTACGCGGCGGCCTCTTATAGCTGCCACTCAATGAATGGCCTCTTCCCCCAT‑ATCAACCCTGGCGAAC‑TG‑TTTGTTTATCTTGGCATTGCCAGCGG‑TCTGACAA‑CGCTGAACCTGCCACTTGGCCCAC‑TGGCGGTGAGTTATCTGCTGGTTGGTCTGGTCACCAATTTCTTCCGCGGCTGGGTGa < 1:1004479/239‑1 (MQ=255) tCCGATGACCCTAAGCCTGGGTCGCTTTATGCCGGAAAAGTACAAACCCAGCTACTACGCGGCGGCCTCTTATAGCTGCCACTCAATGAATGGCCTCTTCCCCCAT‑ATCAACCCTGGCGAAC‑TG‑TTTGTTTATCTTGGCATTGCCAGCGG‑TCTGACAA‑CGCTGAACCTGCCACTTGGCCCAC‑TGGCGGTGAGTTATCTGCTGGTTGGTCTGGTCACCAATTTCTTCCGCGGCTGGGTGa < 2:3379017/239‑1 (MQ=255) cccGATACCCATAAGCCTGGGTCGTTTGAGGCGGGAAAATTCAAAACACAGCTCCTACGCGGCGGCCTCTTATAGCTGCACCTAAATGAATGGCCTCTTCCCCCAT‑ATCACCCCTGGCGAAC‑TG‑TTTGTTTATCTTGGCATGGCCAGCGG‑TCTGACAA‑CGCTGAACCTGCCACTTGGCCCAC‑TGGCGGTGAGTTATCTGCTGGTTGGTCTGGTCACCAATTTCTTCCGCGGCTGGGTGa < 2:1404782/238‑1 (MQ=255) cgctgccccTAAGCCGGGGTCGCTTTAGGCCGAAAAAGTACAACCCCAGCTACTACGCGGCGGCCTCTTATAGCTGCCACTCAATGAATGGCCTCTTCCCCCAT‑ATCAACCCTGGCGAAC‑TG‑TTTGTTTATCTTGGCATTGCCAGCGG‑TCTGACAA‑CGCTGAACCTGCCACTTGGCCCAC‑TGGCGGTGAGTTATCTGCTGGTTGGTCTGGTCACCAATTTCTTCCGCGGCTGGGTGa < 2:2594813/231‑1 (MQ=255) cGATGACCCTAAGCCTGGGTCGCTTTATGCCGGAAAAGTACAAACCCAGCTACTACGCGGCGGCCTCTTATAGCTGCCACTCAATGAATGGCCTCTTCCCCCAT‑ATCAACCCTGGCGAAC‑TG‑TTTGTTTATCTTGGCATTGCCAGCGG‑TCTGACAA‑CGCTGACCCTGCCACTTGGCCCAC‑TGGCGGTGAGTTATCTGCTGGTTGGTCTGGTCACCAATTTCTTCCGCGGCTGGGTGAcc < 1:51199/239‑1 (MQ=255) tGACCCTAAGCCTGGGTCGCTTTATGCCGGAAAAGTACAAACCCAGCTACTACGCGGCGGCCTCTTATAGCTGCCACTCAATGAATGGCCTCTTCCCCCAT‑ATCAACCCTGGCGAAC‑TG‑TTTGTTTATCTTGGCATTGCCAGCGG‑TCTGACAA‑CGCTGAACCTGCCACTTGGCCCAC‑TGGCGGTGAGTTATCTGCTGGTTGGTCTGGTCACCCATTTCTTCCCCGGCTGGGTTACCGa > 1:1098307/1‑238 (MQ=255) aaGCCTGGGTCGCTTTATGCCGGAAAAGTACAAACCCAGCTACTACGCGGCGGCCTCTTATAGCTGCCACTCAATGAATGGCCTCTTCCCCCAT‑ATCAACCCTGGCGAAC‑TG‑TTTGTTTATCTTGGCATTGCCAGCGG‑TCTGACAA‑CGCTGAACCTGCCACTTGGCCCAC‑TGGCGGTGAGTTTTCTGCTGGGTGCTCTGGTCACCAATTTCTTCCCCGGCTGGGTGGCCGa > 1:2594813/1‑231 (MQ=255) ggTCGCTTTATGCCGGAAAAGTACAACCCCAGCTACTACGCGGCGGCCTCTTATAGCTGCCACTCAATGAATGGCCTCTTCCCCCAT‑ATCAACCCTGGCGAAC‑TG‑TTTGTTTATCTTGGCATTGCCAGCGG‑TCTGACAA‑CGCTGAACCTGCCACTTGGCCCAC‑TGGCGGTGAGTTATCTGCTGGTTGGTCTGGTCACCAATTTCTTCCGCGGCTGGGTGa < 1:436707/220‑1 (MQ=255) ggTCGCTTTATGCCGGAAAAGTACAAACCCAGCTACTACGCGGCGGCCTCTTATAGCTGCCACTCAATGAATGGCCTCTTCCCCCAT‑ATCAACCCTGGCGAAC‑TG‑TTTGTTTATCTTGGCATTGCCAGCGG‑TCTGACAA‑CGCTGAACCTGCCACTTGGCCCAC‑TGGCGGTGGGGTTTTTGCTGGTTGGTCTTGTCACCCATTTTTTTCGCGGCTTGGGGAACGATCTGGACACCGCCAt > 1:3404415/1‑239 (MQ=255) ggTCGCTTTATGCCGGAAAAGTACAAACCCAGCTACTACGCGGCGGCCTCTTATAGCTGCCACTCAATGAATGGCCTCTTCCCCCAT‑ATCAACCCTGGCGAAC‑TG‑TTTGTTTATCTTGGCATTGCCAGCGG‑TCTGACAA‑CGCTGAACCTGCCACTTGGCCCAC‑TGGCGGTGGGGTATCTGCTGGTTGGTCTGGGCCCCCATTTTTTTCGCGGCTGGGGTACCGATTTGACCACCGccct > 1:3288816/1‑237 (MQ=255) tttATGCCGGAAAAGTACAAACCCAGCTACTACGCGGCGGCCTCTTATAGCTGCCACTCAATGAATGGCCTCTTCCCCCAT‑ATCAACCCTGGCGAAC‑TG‑TTTGTTTATCTTGGCATTGCCAGCGG‑TCTGACAA‑CGCTGAACCTGCCACTTGGCCCAC‑TGGCGGTGGGGTATTTGCTGGTTGGGCTGGTCACCAATTTCTTCCGCGGCGGGGTGa > 2:75185/1‑214 (MQ=255) tGCCGGAAAAGTACAAACCCAGCTACTACGCGGCGGCCTCTTATAGCTGCCACTCAATGAATGGCCTCTTCCCCCAT‑ATCAACCCTGGCGAAC‑TG‑TTTGTTTATCTTGGCATTGCCAGCGG‑TCTGACAA‑CGCTGAACCTGCCACTTGGCCCAC‑TGGCGGTGGGTTATCTGCCGGGTGGTCTGGTCACCAATTTCTTCCGCGGCGGGGGGACCGATCTGac > 2:436707/1‑220 (MQ=255) cgAAAATGACAAACCCAGCCTCTCCGGCGCGGCCTCTTTTAGGTCCCACTTAAATAAACGCCTCTTCCCCCCTAATCACCCCGGGGGAA‑‑TG‑TTTTTTTTTTTTGGCATTGCCCGGGGTTCTACCAC‑CGCGAACCCTGCCCCTTGGCCCAC‑GGGCGGTGAGTTATCTGCTGGTTGGTCTGGTCACCAATTTCTTCCGCGGCTGGGTGACCGATCTGACCACCGCCATTTTTGAGaaaaa < 2:3469702/237‑1 (MQ=255) gCTACTACGCGGCGGCCTCTTATAGCTGCCACTCAATGAATGGCCTCTTCCCCCAT‑ATCAACCCTGGCGAAC‑TG‑TTTGTTTATCTTGGCATTGCCAGCGG‑TCTGACAA‑CGCTGAACCTGCCACTTGGCCCAC‑TGGCGGTGAGTTATCTGCTGGTTGGTCTGGTCACCAATTTCTTCCGCGGCTGGGTGACCGATCTTACCACCGCCCTTTTTGGGAAAAAGATGGGCA‑TTCAACTTgg > 1:1701019/1‑237 (MQ=255) gCTACTACGCGGCGGCCTCTTATAGCTGCCACTCAATGAAAGGCCTCTTCCCCCAT‑ATCAACCCTGGCGCAC‑TG‑TTTGTTTATCTTGGCATTGCCAGCGG‑TCTGACAA‑CGCTGAACCTTCCACTTGGCCCAC‑TGGCGGTGAGCTGTCGGCGGGTTGGGCTGGGCACCAATTTCTTCCGCGGCCGGGTGACCGATATGACCACCGCCCTTTTTTGTCAAAAGAAGGGCA‑ATCAAcatat > 2:1499526/1‑234 (MQ=255) gcCTCTTATAGCTGCCACTCAATGAATGGCCTCTTCCCCCAT‑ATCAACCCTGGCGAAC‑TG‑TTTGTTTATCTTGGCATTGCCAGCGG‑TCTGACAA‑CGCTGAACCTGCCACTTGGCCCAC‑TGGCGGTGAGTTATCTGCTGGTTGGTCTGGTCACCAATTTCTTCCGCGGCTGGGGGGCCGATCTGACCACCGCCATTTTTGAGAAAAAAATGGGCA‑TTCAACCTGAACAA‑AAAGTTCa > 1:105388/1‑236 (MQ=255) gcCTCTTATAGCTGCCACTCAATGAATGGCCTCTTCCCCCAT‑ATCAACCCTGGCGAAC‑TG‑TTTGTTTATCTTGGCATTGCCAGCGG‑TCTGACAA‑CGCTGAACCTGCCACTTGGCCCAC‑TGGCGGTGAGGTATCTGCCGGTTGGGCTGGTCACCAATTTCTTCCGCGGTCGGGGGACCGATTTGCCCACCGCCCTTTTTTAGAAAAAAATGGGGG‑ATCAACGTGAACca‑aaaaatca > 2:96067/1‑231 (MQ=255) ccTCTTATAGCTGCCACTCAATGAATGGCCTCTTCCCCCAT‑ATCAACCCTGGCGAAC‑TG‑TTTGTTTATCTTGGCATTGCCAGCGG‑TCTGACAA‑CGCTGAACCTGCCACTTGGCCCAC‑TGGCGGTGAGTTATCTGCTGGTTGGTCTGGTCACCAATTTCTTCCGCGGCTGGGGGACCGATCTGACCACCGCCATTTTTTAGAAAAAGATGGGCA‑TTCAACTTGAACAA‑AAAGTTCa > 1:3160085/1‑235 (MQ=255) ttttATAGCTGCCACTCAATGAATGGCCTCTTCCCCCAT‑ATCACCCCGGGCGAAC‑TG‑TTTGTTTATCTGGGCATTGCCAGCGG‑TCTGACAA‑CGCTGACCCTGCCACTTGGCCCAC‑TGGCGGTGAGTTATCTGCTGGTTGGTCTGGTCACCAATTTCTTCCGCGGCTGGGTGACCGATCTGACCACCGCCATTTTTGAGAAAAAGATGGGCA‑TTCAACTTGAACAA‑AAAGTTCACCTGGc < 1:2757943/237‑1 (MQ=255) tttATAGCTGCCTCTCAATGAATGGCCTCTTCCCCCAT‑TTCACCCCTGGCGAAC‑TG‑TTTGTTTATCTTGGCATTGCCAGCGG‑TCTGACAA‑CGCTGACCCTGCCACTTGGCCCAC‑TGGCGGTGAGTTATCTGCTGGTTGGTCTGGTCACCAATTTCTTCCGCGGCTGGGTg < 2:3089205/169‑1 (MQ=255) tggCTGCCACTCAATGAATGGCCTCTTCCCCCAT‑ATCAACCCTGGCGAAC‑TG‑TTTGTTTATCTTGGCATTGCCAGCGG‑TCTGACAC‑CGCTGACCCTGCCACTTGGCCCAC‑TGGCGGTGAGTTATCTGCTGGTTGGTCTGGTCACCAATTTCTTCCGCGGCTGGGTGCCCGATCTGACCACCGCCATTTTTGAGAAAAAGATGGGCA‑TTCAACTTGAACAA‑AAAGTTCACCTGGCAGGAg < 1:555893/237‑1 (MQ=255) gCCACTCAATGAATGGCCTCTTCCCCCAT‑ATCAACCCTGGCGAAC‑TG‑TTTGTTTATCTTGGCATTGCCAGCGG‑TCTGACAA‑CGCTGAACCTGCCACTTGGCCCAC‑TGGCGGTTGGGTAACTGCCGGGTGGTCTGGTCACCAATTTCTTACTCGGCTAGGGGGACGTGCTTAACACCCCCCTCTTTGGTGAAAAGATGGGCA‑CACAACTTCAACAA‑AAAAGTCACATTGCCAGAGCAAc > 2:3331055/1‑238 (MQ=255) gCCACTCAATGAATGGCCTCTTCCCCCAT‑ATCAACCCTGGCGAAC‑TG‑TTTGTTTATCTTGGCATTGCCAGCGG‑TCTGACAA‑CGCTGAACCTGCCACTTGGCCCAC‑TGGCGGTGAGTTATCTGCTTGTTGGTCTGGTCACCAATTTCTTCCGCGGCTGGGTGACCGATCTGACCACCGCCATTTTTTAGAAAAAGATGGGCA‑TTCAACTTTAACAA‑AAAGTTCCCCTAGCAGGAGCAAca > 1:306007/1‑239 (MQ=255) gCCACTCAATGAATGGCCTCTTCCCCCAT‑ATCAACCCTGGCGAAC‑TG‑TTTGTTTATCTTGGCATTGCCAGCGG‑TCTGACAA‑CGCTGAACCTGCCACTTGGCCCAC‑TGGCGGTGAGTTATCTGCTGGTTGGTTTGGTCCCCAATTTCTTCCGCGGCTGGGGGACCCAGCTGCCCACCGCCAATTTTGTGAAAAAAATGGGGA‑TTCAACTTTAAAAA‑AAAACTCAACTGGCAGCAGCAAca > 2:2727099/1‑239 (MQ=255) gCCACTCAATGAATGGCCTCTTCCCCCAT‑ATCAACCCTGGCGAAC‑TG‑TTTGTTTATCTTGGCATTGCCAGCGG‑TCTGACAA‑CGCTGAACCTGCCACTTGGCCCAC‑TGGCGGTGAGTTATCTGCTGGTTGGTCTGGTCACCAATTTCTTCCGCGGCTGGGGGACCGATCTGACCACCGCCCTTTTTGAGAAAAAAATGGGCA‑TTCAACTTGAACAA‑AAAGTTCACCTGGCAGGAGCAAca > 1:1115640/1‑239 (MQ=255) gCCACTCAATGAATGGCCTCTTCCCCCAT‑ATCAACCCTGGCGAAC‑TG‑TTTGTTTATCTTGGCATTGCCAGCGG‑TCTGACAA‑CGCTGAACCTGCCACTTGGCCCAC‑TGGCGGTGAGTTATCTGCTGGGTGGTCTGGTCCCCAATTTCTTTCGTGGCTGGGTGACCCATCTGACCACCGCCATTTTTGAGAAAAACATGGGCA‑TTCAACTTGAACAA‑AAAGTTGACCTGGTCGGAGCAAca > 2:2055437/1‑239 (MQ=255) gCCACTCAATGAATGGCCTCTTCCCCCAT‑ATCAACCCTGGCGAAC‑TG‑TTTGTTTATCTTGGCATTGCCAGCGG‑TCTGACAA‑CGCTGAACCTGCCACTTGGCCCAC‑TGGCGGTGAGGTATCTTCTGGTTGGTCTGGTCACCAATTTCTTCCGCGGCTGGGTGACCGATCTGACCACCGCCATTTTTGTGAAAAAGATGTGCC‑TTCAACTTGAACAA‑AAAATTCACCCGGCCGGAGCAAc > 1:2694281/1‑238 (MQ=255) ccACTCAATGAATGGCCTCTTCCCCCAT‑ATCAACCCTGGCGAAC‑TG‑TTTGTTTATCTTGGCATTGCCAGCGG‑TCTGACAA‑CGCTGAACCTGCCACTTGGCCCAC‑TGGCGGTGAGTTATCTGCTGGGTGGTCTGGGCACCAATTTCTTTCCCGGCTGGGGGACCGGTCTGa > 1:3089205/1‑170 (MQ=255) ctataagtgaatgGCCTCTCCCCCAAT‑A‑CAACCCCTGCGAACTTT‑TTTTTTTATCTTGCCATGGCAAGCGG‑TCTGACAA‑CGCTGACCCTGCCACTTGGCCCAC‑TGGCGGTGAGTTATCTGCTGTTTGGTCTGGTCACCAATTTCTTCCGCGGCTGGGTGACCGATCTGACAACCGCCATTTTTGAGAAAAAGATGGGCA‑TTCAACTTGAACAA‑AAAGTTCACCTGGCAGGAGCaa < 2:3465143/228‑1 (MQ=255) cACTCAATGAATGGCCTCTTCCCCCAT‑ATCAACCCTGGCGAAC‑TG‑TTTGTTTATCTTGGCATTGCCAGCGG‑TCTGACAA‑CGCTGAACCTGCCACTTGGCCCAC‑TGGCGGTGAGTTATCTGCTGGTTGGTCTGGTCACCAATTTCTTCCGCGGCTGGGGGACCGATCTGACCCCCGCCATTTTTGAGAAAAAGATGGGCA‑TTCAACTTGAACAA‑AAAATTACCCTGGCAGGGGCAAcatc > 1:1493313/1‑239 (MQ=255) aatgaatgGCCTCTTCCCCCAT‑ATCAACCCTGGCGAAC‑TG‑TTTGTTTATCTTGGCATTGCCAGCGG‑TCTGACAA‑CGCTGAACCTGCCACTTGGCCCAC‑TGGCGGTGAGTTATCTGCTTGTTTGTCTGGTTCCCCATTTCTTTCCCGGCTGGGGCACCGCACTGACCACCCCCATTTTTTAGAAAAAGATGGGCATTTTAACTTG‑ACAA‑AAAAAGCAAATGGCCGGAGCAAAAACACGAc > 2:3206374/1‑239 (MQ=255) aatgaaggGCCCCTCCCCCCAT‑ACACCCCCTGGAGAAC‑TT‑TTTTTTTATTTGGGAATTGCCGGCGG‑T‑TGAAAACCCCTGACCCTGCCACTTGGCCCCC‑TGGCGGTGAGTTATCTGCTGGTTGGTCTGGTCACCAATTTCTTCCGCGGCGGGGTGACCGATCTGACCACCGCCATTTTTGAGAAAAAGATGGGCA‑TTCAACt < 2:3512074/201‑1 (MQ=255) tgatgggCCTCTCCCCCCAT‑ACCACCCCTGGCG‑AC‑TGTTTTGTTTATCTTGGCATTGCCAGCGG‑TCGGACAA‑CGCTGACCCTGCCACTTGGCCCAC‑TGGCGGTGAGTTATCTGCTGGTTGGTCTGGTCACCAATTTCTTCCGCGGCTGGGTGACCGATCTGACCACCGCCATTTTTGAGAAAAAGATGGGCA‑TTCAACTTGAACAA‑AAAGTTCACCTGGCAGGAGCAAca < 1:2645365/225‑1 (MQ=255) tgaatgGCCTCTTCCCCCAT‑ATCAACCCTGGCGAAC‑TG‑TTTGTTTATCTTGGCATTGCCAGCGG‑TCTGACAA‑CGCTGAACCTGCCACTTGGCCCAC‑TGGCGGTGAGGTATCTGCTGGTTGGTCTGGTCACCAATTTCTTCCGCGGCTGGGTGACCGATCTGACCACCGCCATTTTTGAGAAAAAGATGGGCA‑GTCAACTTGAAAAA‑AAAATTTACCTGGCAGGAGCAAAATCACAACGc > 2:1106693/1‑239 (MQ=255) aaggcccTCTCCCCCCAT‑ATCACCCCGGGCGAAC‑TG‑TTTTTTTATCTTGGCATTGCCAGCGG‑TCTGACAC‑CGCTGACCCTGCCACTTGGCCCAC‑TGGCGGTGAGTTATCTGCTGGTTGGTCTGGTCACCAATTTCTTCCGCGGCTGGGTGACCGATCTGACCACCGCCATTTTTGAGAAAAAGATGGGCA‑TTCAACTTGAACAA‑AAAg < 1:1306175/203‑1 (MQ=255) actctCCCCCAAT‑ACCACCCGGGGCGATC‑TT‑TTTGTTTATTTTGCCTTGCCCGGCGT‑TCTAAAAA‑CGGT‑AACCCGCCCCTTTGCCCCCTTGGCGGTGGGTTTTCGGCTGTTTGGTCTGGTCACCAATTTCTTCCGCGGCGGGGTGACCGATCTGCCCACCGCCATTTTTGAGAAAAAGATGGGCA‑TTCAACTTGAACAA‑AAAg < 2:2754012/202‑1 (MQ=255) cttttCCCCCAT‑ATCACCCCGGGCGACC‑TG‑TTTGTTTATCTGGGCATTGCCAGCGG‑TCTGACAA‑CGCTGACCCTGCCACTTGGCCCAC‑TGGCGGTGAGTTATCTGCTGGTTGGTCTGGTCACCAATTTCTTCCGCGGCTGGGTGACCGATCTGACCACCGCCATTTTTGAGAAAAAGATGGGCA‑TTCAACTTGAACAA‑AAAGTTCACCTGGCAGGAGCAACATCATGACGCATATTCgg < 1:1724716/236‑1 (MQ=255) ctctTCCCCCAT‑ATCAACCCTGGCGAAC‑TG‑TTTGTTTATCTTGGCATTGCCAGCGG‑TCTGACAA‑CGCTGAACCTGCCACTTGGCCCAC‑TGGCGGTGAGTTATCTGCTGGTTGGTCTGGTCACCAATTTCTTCCGCGGCTGGGGGACCGATCTGACCACCGCCATTTTTTAGAAAAAGATGGGCA‑TTCAACTTGAACaa‑aaa > 1:3512074/1‑201 (MQ=255) ctccccccAT‑ATCACCCCGGGCGAAC‑TG‑TTTGTTTATCTGGGCATTGCCGGCGG‑TCTGACAC‑CGCTGACCCTGCCACTTGGCCCAC‑TGGCGGTGAGTTATCTGCTGGTTGGTCTGGTCACCAATTTCTTCCGCGGCTGGGTGACCGATCTGACCACCGCCATTTTTGAGAAAAAGATGGGCA‑TTCAACTTGAACAA‑AAAGTTCACCTGGCAGGAGCAACATCATGACGCATATTCGGAt < 1:1106693/236‑1 (MQ=255) ctTCCCCCGT‑ACCACCCGTGGCAAAT‑GT‑TTTGTGTACTTTGACTTGGCCCGGGG‑TCTGCCAC‑CGCGGACCCGGCCACTTGGCCCAC‑TGGCGGTGAGTTATCTGCTGGTTGGTCTGGTCACCAATTTCTTCCGCGGCGGGGTGACCGATCTGACCACCGCCATTTTTGAGAAAAAGATGGGCA‑TTCAACTTGAACAA‑AAAGTTCACCTGGCAGGAGCAACATCATGACGCATATTCGGAt < 2:3053545/239‑1 (MQ=255) ctTCCCCCAT‑ATCAACCCTGGCGAAC‑TG‑TTTGTTTATCTTGGCATTGCCAGCGG‑TCTGACAA‑CGCTGAACCTGCCACTTGGCCCAC‑TGGCGGTGAGTTATCTGCTGGTTGGTCTGGTCACCAATTTCTTCCGCGGCTGGGGGACCGATCTGACCACCGCCATTTTTTAGAAAAAAATGGGGG‑TTCAACTTGAAAAA‑AAAACTCACCCTGCAGGGGAAACATCACGAAGCa > 2:2645365/1‑230 (MQ=255) tCCCCCAT‑ATCAACCCTGGCGAAC‑TG‑TTTGTTTATCTTGGCATTGCCAGCGG‑TCTGACAA‑CGCTGAACCTGCCACTTGGCCCAC‑TGGCGGTGAGTTATCTGCTGGTTGGTCTGGTCACCAATTTCTTCCGCGGCTGGGGGACCGATCTGACCACCGCCCTTTTTGAGAAAAAAATGGGCA‑TTCAACTTTAACAA‑AAAGTTCACCTGGCAGGAGCAACATCATGACGCATATTCGGATCg > 1:1830741/1‑239 (MQ=255) ccccAT‑ATCACCCCGGGGGAAT‑TG‑TTTGTTTATCTTGGCATTGCCGGCGG‑TCTGACAA‑CGCTGACCCTGCCACTTGGCCCAC‑TGGCGGTGAGTTATCTGCTGGTTGGTCTGGTCACCAATTTCTTCCGCGGCTGGGTGACCGATCTGACCACCGCCATTTTTGAGAAAAAGATGGGCA‑TTCAACTTGAACAA‑AAAGTTCACCTGGCAGGAGCAACATCATGACGCATATTCGGATCGaa < 1:2055437/239‑1 (MQ=255) ccAT‑ATCAACCCTGGCGAAC‑TG‑TTTGTTTATCTTGGCATTGCCAGCGG‑TCTGACAA‑CGCTGAACCTGCCACTTGGCCCAC‑TGGCGGTGGGTTATCTGCTGGTTTGGCTGGTCACCAATTTTTTCCGCGGCTGGGGGGCCGCGCTGACCACCCCCCTTTTTTAGAAAAAAAAGGGCA‑TTCAAATTTAAAAA‑AAAAATCAACTGGCAGGAGGAAAATCAAGAACCATAtttcgtgagcaaa > 2:2803516/1‑228 (MQ=255) at‑atCACCCCGGCCCATC‑TT‑TTTGTTTATTTTGCAATTGCCGGGGG‑TTGGACAC‑CCCTGACCCTGCCACTTGGCCCAC‑GGGCGGTGAGTTATCTGCTGGTTGGTCTGGTCACCAATTTCTTCCGCGGCTGGGTGACCGATCTGACCACCGCCATTTTTGAGAAAAAGATGGGCA‑TTCAACTTGAACAA‑AAAGTTCACCTGGCAGGAGCAACATCATGACGCATATTCGGATCGAAAAAg < 2:416021/239‑1 (MQ=255) t‑atCAACCCTGGCGAAC‑TG‑TTTGTTTATCTTGGCATTGCCAGCGG‑TCTGACAA‑CGCTGAACCTGCCACTTGGCCCAC‑TGGCGGTGAGTTATCTGCTGGTTGGTCTGGTCACCAATTTCTTCCCCGGCTGGGGGACCGATCTTACCCCCGCCATTTTTTAGAAAAAGATGGGGA‑TTTAACTTTAACAA‑AAAAGTCACCCGGc > 1:2754012/1‑201 (MQ=255) gtCAACCCTGGCGAAC‑TG‑TTTGTTTATCTTGGCATTGCCAGCGG‑TCTGACAC‑CGCGGAACCTGCCCCTTGGCCCAC‑TGGCGGTGAGTTATCTGCTGGTTGGTCTGGTCACCAATTTCTTCCGCGGCTGGGTGACCGATCTGACCACCGCCATTTTTGAGAAAAAGATGGGCA‑TTCAACTTGAACAA‑AAAGTTCACCTGGCAGGAGCAACATCATGACGCATATTCGGATCGAAAAAGGa < 1:3342225/238‑1 (MQ=255) aCCCTGGCGAAC‑TG‑TTTGTTTATCTTGGCATTGCCAGCGG‑TCTGACAA‑CGCTGAACCTGCCACTTGGCCCAC‑TGGCGGTGAGTTATCTGCTGGTTGGTCTGGTCCCCAATTTCTTCCGCGGCTGGGGGACCCATCTGACCCCCGCCCTTTTTGAGAAAAAGATGGGGA‑TTCAACTTGAACAA‑AAAGTTCTCCTTGCAGGAGGAACATCCTGACGCATATTCTGAGCAAAAAAGGACCgg > 2:491580/1‑239 (MQ=255) cccGGGCGACC‑TG‑TTGGTTTATCTTGGCATTGCCAGCGG‑TCTGACAC‑CGCTGACCCTGCCACTTGGCCCAC‑TGGCGGTGAGTTATCTGCTGGTTGGTCTGGTCACCAATTTCTTCCGCGGCTGGGTGACCGATCTGACCACCGCCATTTTTGAGAAAAAGATGGGCA‑TTCAACTTGAACAA‑AAAGTTCACCTGGCAGGAGCAACATCATGACGCATATTCGGATCGAAAAAGGAACgg < 1:3597537/238‑1 (MQ=255) tGGCGAAC‑TG‑TTTGTTTATCTTGGCATTGCCAGCGG‑TCTGACAA‑CGCTGAACCTGCCACTTGGCCCAC‑TGGCGGTGAGTTATCTGTTGGGTGGGTTTGTCACCAATTTCTTTCGCCGCTGGGGGGCCGATCTGTCCACCGCCATTTTTTAGAAAAAGATGGGGC‑TTTAAATTGAACAA‑AAAGGTCACCTTGCCGGAGCAACATACTGACGCATATTCTGATCGCAAAAGGGACgggggg > 2:369789/1‑239 (MQ=255) ggCGAAC‑TG‑TTTGTTTATCTTGGCATTGCCAGCGG‑TCTGACAA‑CGCTGAACCTGCCACTTGGCCCAC‑TGGCGGTGAGTTATCTGCTTGTTGGTCTGGTCACCAATTTCTTCCGCGGCTGGGGGACCGATCTGACCACCGCCCTTTTTGAGAAAAAGATGGGGA‑TTCAACTTTAACAA‑AAAGTTCACCTGGCAGGAGCAACATCCTGACGCATATTCGGATCGAAAAAGGa > 1:3228383/1‑230 (MQ=255) ggCGAAC‑TG‑TTTGTTTATCTTGGCATTGCCAGCGG‑TCTGACAA‑CGCTGAACCTGCCACTTGGCCCAC‑TGGCGGTGAGTTATCTGCTGGATGGTCTGGTCACCAATTTCTTCCGCGGCTGGGTGACCGATCTGACCACCGCCATTTTTGAGAAAAAAATGGGGA‑TTTAACTTGAAAAA‑AAAGTTAACCCTGCCGGAGCAACAACATGACGCATATTCGGATCGAAAAAGGAAAggggt > 2:287364/1‑235 (MQ=255) ggCGAAC‑TG‑TTTGTTTATCTTGGCATTGCCAGCGG‑TCTGACAA‑CGCTGAACCTGCCACTTGGCCCAC‑TGGCGGTGAGGTATCTGCTGGTTGGTCTGGTCACCCATTTCTTCCGCGGCTGGGTGACCGATCTGGCCACCGCCCTTTTTTAGAAAAAAATGGGCA‑TTCAACTTTAACAA‑AAAGTTCCCCTGGCAGGAGCAACATCATGAATCCTATTTGGATCGAAAAAAGAACGGGTGGc > 2:188144/1‑239 (MQ=255) gCGAAC‑TG‑TTTGTTTATCTTGGCATTGCCAGCGG‑TCTGACAA‑CGCTGAACCTGCCACTTGGCCCAC‑TGGCGGTGGGGTTTCTGCTGGTTGGTCCGGTCCCCCATTTCTTTCGCGGCTGGGGGACCGATCTTTCCACCGCCATTTTTTGGAAAAAGATGGGCA‑TTTCACTTGTAAAA‑AAAACTTACCTGGGCGGGGACACATCATTACGCATATTCGGGGAGGAAAAAGAACAGGTg > 2:1509552/1‑236 (MQ=255) gCGAAC‑TG‑TTTGTTTATCTTGGCATTGCCAGCGG‑TCTGACAA‑CGCTGAACCTGCCACTTGGCCCAC‑TGGCGGTGAGTTATCTGCTGGTTGGTCTGGTCACCAATTTCTTCCGCGGCTGGGTGACCGATCTGACCACCGCCATTTTTGAGAAAAAGATGGGCA‑TTCAACTTGAACAA‑AAAGTTCACCTGGCCGGAGCAACATCATGACCCATAtt > 1:2142818/1‑214 (MQ=255) gCGAAC‑TG‑TTTGTTTATCTTGGCATTGCCAGCGG‑TCTGACAA‑CGCTGAACCTGCCACTTGGCCCAC‑TGGCGGTGAGTTATCTGCTGGTTGGTCTGGTCACCAATTTCTTCCGCGGCTGGGGGACCGATCTGACCACCGCCATTTTTTAGAAAAAGATGGGCA‑TTCAACTTGAACAA‑AAAATTCACCTGGCAGGAGCAACATCATGACGCATATTCGGATCGAAAAAGGAACggggg > 1:698171/1‑234 (MQ=255) gCGAAC‑TG‑TTTGTTTATCTTGGCATTGCCAGCGG‑TCTGACAA‑CGCTGAACCTGCCACTTGGCCCAC‑TGGCGGCGGGTTATCTGCCGGTTGTGCCTGTCACCCATTTCTTTCCCGGGTGGGTGGCCGAGCTCCACCCCGCCATTTTTGAGAAAAACATGGGCC‑TTCACCATGCACAACAAAGTCCACAT‑GCCGGAACAACAACCTGACGCAAATTTGGCACGCAAAAGGAACGGTTgaga > 2:2202554/1‑236 (MQ=255) c‑TG‑TTTGTTTATCTTGGCATTGCCAGCGG‑TCTGACAA‑CGCTGAACCTGCCACTTGGCCCAC‑TGGCGGTGAGGTATCTGCTGGTTGGTCTGGTCACCAATTTCTTCCGCGGCTGGGGGACCGATCTGACCACCGCCATTTTTTAGAAAAAGATGGGGA‑TTCAAACTGAACAA‑AAAGGTTCCCTGGCAGGGACAACAACATTACGCCAATTCCGATTGAAAAAAGAAAGGGGGGCTgggg > 2:3597537/1‑238 (MQ=255) ggCATTGCCAGCGG‑TCTGACAA‑CGCTGAACCTGCCACTTGGCCCAC‑TGGCGGGGAGTTTTTTGCTTGTTGGTCTGGTCACCAATTTTTTCCGCGGCTGGGGGACCGATCTGCCCACCGCCATTTTTTAGAAAAAGATGGGCA‑TTCAACTTGAACAA‑AAAAATCACCTGGCAGGAGCAACATCATGACGCATATTCGGATCCAAAAAAGAACGGGGGGCTTGGGGGGcc‑c > 2:2005717/1‑229 (MQ=255) gACAA‑CGCTGACCCTGCCCCTTGGCCCAC‑TGGCGGTGAGTTATCTGCTGGTTGGTCTGGTCACCAATTTCTTCCGCGGCTGGGTGACCGATCTGACCACCGCCATTTTTGAGAAAAAGATGGGCA‑TTCAACTTGAACAA‑AAAGTTCACCTGGCAGGAGCAACATCATGACGCATATTCGGATCGAAAAAGGAACGGGTGGCTGGGGCGGCC‑CGCTTGAGCTGAAAGCCACGCCGGGaaa < 1:2346388/239‑1 (MQ=255) cGCTGACCCTGCCACTTGGCCCAC‑TGGCGGTGAGTTATCTGCTGGTTGGTCTGGTCACCAATTTCTTCCGGGGCTGGGGGCCCGATCTGACCACCGCCATTTTTGAGAAAAAGATGGGCA‑TTCAACTTGAACAA‑AAAGTTCACCTGGCAGGAGCAACATCATGACGCATATTCGGATCGAAAAAGGAACGGGTGGCTGGGGCGGCC‑CGCTTGAGCTGAAAGCCACGCCGGGaaaaaaaa < 1:3191677/239‑1 (MQ=255) cGCTGACCCTGCCACTTGGCCCAC‑TGGCGGTGAGTTATCTGCTGGTTGGTCTGGTCACCAATTTCTTCCGCGGCTGGGTGACCGATCTGACCACCGCCATTTTTGAGAAAAAGATGGGCA‑TTCAACTTGAACAA‑AAAGTTCACCTGGCAGGAGCAACATCATGACGCATATTCGGATCGAAAAAGGAACGGGTGGCTGGGGCGGCC‑CGCTTGAGCTGAAAGCCACGCCGGGaaaaaaaa < 1:2125750/239‑1 (MQ=255) gCTGAACCTGCCACTTGGCCCAC‑TGGCGGTGAGTTATCTGCTGGTTGGTCTGGTCACCAATTTCTTCCGCGGCTGGGTGACCGATCTGACCACCGCCATTTTTGAGAAAAAGATGGGCA‑TTCAACTTGAACAA‑AAAGTTCACCTGGCAGGAGCAACATCATGACGCATATTCGGATCGAAAAAAGAACGGGGGGCTGGGGCGGCC‑CGCTTGAGCTGAAAGCCACGCCGGGgaaaaaaa > 1:457652/1‑238 (MQ=255) gagccTGCCATTGCGCCCTC‑TGTCGGTGTGTTATCTGCTGGTTGTTCTGTTCACCAATTTCTTCCGCGGCTGGGTGACCAATCTGACCGCCGCCATTTTTGAGAAAAAGATGGGCA‑TTCAACTTGAACAA‑AAAGTTCACCTGGCAGGAGCAACATCATGACGCATATTCGGATCGAAAAAGGAACGGGTGGCTGGGGCGGCC‑CGCTTGAGCTGAAAGCCACGCCGGGAAAAAAAATCGt < 2:1121627/236‑1 (MQ=255) aaaCCTGCCACTTGGCCCCC‑GGGGGGTGAGTTATCTGCTGGTTGGTCTGGTCACAAATTTCTTCCGCGGCTGGGTGCCCGATCTGACCACCGCCATTTTTGAGAAAAAGATGGGCA‑TTCAACTTGAACAA‑AAAGTTCACCTGGCAGGAGCAACATCATGACGCATATTCGGATCGAAAAAGGAACGGGTGGCTGGGGCGGCC‑CGCTTGAGCTGAAAGCCACGCCGGGAAAAAAAATCGt < 1:2534496/238‑1 (MQ=255) aCCTGCCACTTGGCCCAC‑TGGCGGGGAGTTTTTTGCCGGTTGGGCTGGTCCCCCAATTCTTCCGCGGCTGGGGGACCGATCTGACCCCCGCCCTTTTTGGGAAAAAGATGGGGC‑TTTAACTTGGACAA‑AAAATTCACCTGGCCGGAGCAACATCATGACGCATATTCGGATCGAAAAAGGAACGGGGGGCTGGGGCGGGC‑CGCCTGAGCTGAAAGCCACGGCGGGGAAAAAAATCGt > 2:1131721/1‑237 (MQ=255) aCCTGCCACTTGGCCCAC‑TGGCGGGGAGTTATCTGCTGGGTGGTCTGGTCCCCAATTTCTTCCGCGGCTGGGGGACCGATCTGACCACCGCCATTTTTTGGAAAAAGATGGGCC‑TTCAACTTGAACAA‑AAACATCACCCGGCAGGGGCAAAATTATGACGCATAATCCGCTCGGAAAAAGAAAGGGTGGCAGGGGGGGCCGCACTTACGCTGAAGCCCAC‑CCGGGcgaaaaaacatgcc > 2:977661/1‑233 (MQ=255) gCCACTTGGCCCAC‑TGGCGGTGAGTTATTCGCCGGTTGGGCTTGTCCCCAAATTTTTTCCCGGCTGGGGGACCGATCTTACCACCGCCATTTTTGACAAAAAGATGGGCC‑TTTAACTTTGACAA‑AAAATTCACCTGGCAGGAGCCACATAATAATGCATATTCTGATCGaaaa > 2:3002956/1‑173 (MQ=255) gCCACTTGGCCCAC‑TGGCGGTGAGTTATCTGCTGGTTGGTCTGGGCCCCAATTTCTTCCGCGGCTGGGGGACCGATCTGACCACCGCCATTTTTTAGAAAAAGATGGGCA‑TTTAACTTGAACAA‑AAAGATCACCTGGCAGGAGCAAAAACATGAAGCCTATTCTGGTCGAAAAAGGAACGGGTGGCGGGGGGGGCC‑CGCTTCAGCTGGAAACCACGACGGGGAAAAAACTCggacata > 2:1083173/1‑232 (MQ=255) cACTTGGCCCAC‑TGGCGGTGAGTTATCTTCTGGTTGGTCTGGGCACCAATTTTTTCCGCGGGTGGGTGACCGATCTGACCCCCGCCATTTTTTAGGAAAAGATGGGGA‑TTCAACTTTGACAA‑AAAGGTCCCCCTGCCGGGGGCACATCATg > 2:1637571/1‑151 (MQ=255) ggCCCAC‑TGGCGGTGAGTTATCTTCTGGTTGGTCTGGGCACCAATTTCTTCCGCGGCTGGGGGACCGATCTGACCACCGCCATTTTTGAGAAAAAGATGGGCA‑TTCAACTTGAACAA‑AAAGTTCACCTGGCAGGAGCAACATCATGACGCATATTCGGATCGAAAAAAGAACGGGGGGGTg > 1:1885854/1‑181 (MQ=255) cccAC‑TGGCGGTGAGTTATTTGCTGGTTGGTCTGGTCACCAATTTCTTCCGCGGCTGGGTGACCGATCTGACCACCGCCCTTTTTTAGAAAAAGATGGGCA‑TTTAACTTGAACAA‑AAAGATCACCTGGCAGGAGCAACATCATGACGCATATTCGGATCGAAAAAGGAACGGGTGGCGGGGGCGGGC‑CGCTTGATCTGAAAACCACGCCGGGGAAAAAAAACCTCCATAACAccccccg > 2:2021589/1‑237 (MQ=255) gTGAGTTATCTGCTGGTTGGTCTGGTCACCAATTTCTTCCCCGGCTGGGGGACCGATCTGACCACCGCCATTTTTGAGAAAAAGATGGGCA‑TTCAACTTGAACAA‑AAAATTCACCTGGCAGGAGCAACATCATGACGCATATTCGGATCGAAAAAGGAACGGGTGGCTGGGGCGGCC‑CGCCTTAGCTGAACACCCCGCCGGGGAAAAAAAATGGCTACAATAACGCCGGTACCCGGccc > 2:2932139/1‑238 (MQ=255) aTCTGCTGGTTGGTCTGGTCACCAATTTCTTCCGCGGCTGGGTGACCGATCTGACCACCGCCATTTTTGAGAAAAAGATGGGCA‑TTCAACTTGAACAA‑AAAGTTCACCTGGCAGGAGCAACATCATGACGCATATTCGGATCGAAAAAGGAACGGGTGGCTGGGGCGGCC‑CGCTTGAGCTGAAAGCCACGCCGGGAAAAAAAATCGTCTATATCACCGCCGGTACCCGGCCTGCg > 1:50846/1‑235 (MQ=255) tCTGCTGGTTGGTCTGGTCACCAATTTCTTCCGCGGCTGGGTGACCGATCTGACCACCGCCATTTTTGAGAAAAAGATGGGCA‑TTCAACTTGAACAA‑AAAGTTCACCTGGCAGGAGCAACATCATGACGCATATTCGGATCGAAAAAGGAACGGGTGGCTGGGGCGGCC‑CGCTTGAGCTGAAAGCCACGCCGGGAAAAAAAACCGTCTATATCACCGCCGGTACCCGGCCCGCCAttgt > 2:2769749/1‑239 (MQ=255) tggttggtCTGGTCACCAATTTCTTCCGCGGCTGGGTGACCGATCTGACCACCGCCATTTTTGAGAAAAAGATGGGCA‑TTCAACTTGAACAA‑AAAGTTCACCTGGCAGGAGCAACATCATGACGCATATTCGGATCGAAAAAGGAACGGGTGGCTGGGGCGGCC‑CGCTTGAGCTGAAAGCCACGCCGGGAAAAAAAATCGTCTATATCACCGCCGGTACCCGGCCTGCGATTGTTGACa > 1:1050180/1‑239 (MQ=255) tggttggtCTGGTCACCAATTTCTTCCGCGGCTGGGTGACCGATCTGACCACCGCCATTTTTGAGAAAAAGATGGGCA‑TTCAACTTGAACAA‑AAAGTTCACCTGGCAGGAGCAACATCATGACGCATATTCGGATCGAAAAAGGAACGGGTGGCTGGGGCGGCC‑CGCTTGAGCTGAAAGCCACGCCGGGAAAAAAAATCGTCTATATCACCGCCGGTACCCGGCCTGCGATTGTTGACa > 1:1120767/1‑239 (MQ=255) tggttggtCTGGTCACCAATTTCTTCCGCGGCTGGGTGACCGATCTGACCACCGCCATTTTTGAGAAAAAGATGGGCA‑TTCAACTTGAACAA‑AAAGTTCACCTGGCAGGAGCAACATCATGACGCATATTCGGATCGAAAAAGGAACGGGTGGCTGGGGCGGCC‑CGCTTGAGCTGAAAGCCACGCCGGGAAAAAAAATCGTCTATATCACCGCCGGTACCCGGCCTGCGATTGTTGACa > 2:860365/1‑239 (MQ=255) tggttggtCTGGTCACCAATTTCTTCCGCGGCTGGGTGACCGATCTGACCACCGCCATTTTTGAGAAAAAGATGGGCA‑TTCAACTTGAACAA‑AAAGTTCACCTGGCAGGAGCAACATCATGACGCATATTCGGATCGAAAAAGGAACGGGTGGCTGGGGCGGCC‑CGCTTGAGCTGAAAGCCACGCCGGGAAAAAAAATCGTCTATATCACCGCCGGTACCCGGCCTGCGATTGTTGACa > 1:1454566/1‑239 (MQ=255) tggttggtCTGGTCACCAATTTCTTCCGCGGCTGGGTGACCGATCTGACCACCGCCATTTTTGAGAAAAAGATGGGCA‑TTCAACTTGAACAA‑AAAGTTCACCTGGCAGGAGCAACATCATGACGCATATTCGGATCGAAAAAGGAACGGGTGGCTGGGGCGGCC‑CGCTTGAGCTGAAAGCCACGCCGGGAAAAAAAATCGTCTATATCACCGCCGGTACCCGGCCTGCGATTGTTGACa > 1:223314/1‑239 (MQ=255) tggttggtCTGGTCACCAATTTCTTCCGCGGCTGGGTGACCGATCTGACCACCGCCATTTTTGAGAAAAAGATGGGCA‑TTCAACTTGAACAA‑AAAGTTCACCTGGCAGGAGCAACATCATGACGCATATTCGGATCGAAAAAGGAACGGGTGGCTGGGGCGGCC‑CGCTTGAGCTGAAAGCCACGCCGGGAAAAAAAATCGTCTATATCACCGCCGGTACCCGGCCTGCGATGGTTGaaa > 2:1821496/1‑237 (MQ=255) gttggtCTGGTCACCAATTTCTTCCGCGGCTGGGTGACCGATCTGACCACCGCCATTTTTGAGAAAAAGATGGGCA‑TTCAACTTGAACAA‑AAAGTTCACCTGGCAGGAGCAACATCATGACGCATATTCGGATCGAAAAAGGAACGGGTGGCTGGGGCGGCC‑CGCTTGAGCTGAAAGCCACGCCGGGAAAAAAAATCGTCTATATCACCGCCGGTACCCGGCCTGCGATTGTTGACaa > 1:1794172/1‑238 (MQ=255) gttggtCTGGTCACCAATTTCTTCCGCGGCTGGGTGACCGATCTGACCACCGCCATTTTTGAGAAAAAGATGGGCA‑TTCAACTTGAACAA‑AAAGTTCACCTGGCAGGAGCAACATCATGACGCATATTCGGATCGAAAAAGGAACGGGTGGCTGGGGCGGCC‑CGCTTGAGCTGAAAGCCACGCCGGGAAAAAAAATCGTCTATATCACCGCCGGTACCCGGCCTGCGATTGTTGACaa > 1:135635/1‑238 (MQ=255) gttgggCGGGCCTCCAAAGTCATCCGCAGCGGGAAGACCGGTCTGGCCACCGCCATTTTTGAGAAAAAGATGGGGA‑TTAAACTTGAACAA‑AAAGTTCACCTGGCAGGAGCAACATCATGACGCATATTCGGATCGAAAAAGGAACGGGTGGCTgggg < 2:2146192/157‑1 (MQ=255) ggtctggtcACCAATTTCTTCCGCGGCTGGGTGACCGATCTGACCACCGCCATTTTTGAGAAAAAGATGGGCA‑TTCAACTTGAACAA‑AAAGTTCACCTGGCAGGAGCAACATCATGACGCATATTCGGATCGAAAAAGGAACGGGTGGCTGGggcggc > 1:2953735/1‑158 (MQ=255) ggtctggtcACCAATTTCTTCCGCGGCTGGGTGACCGATCTGACCACCGCCATTTTTGAGAAAAAGATGGGCA‑TTCAACTTGAACAA‑AAAGTTCACCTGGCAGGAGCAACATCATGACGCATATTCGGATCGAAAAAGGAACGGGTGGCTGGGGCGGCC‑CGCTTGAGCTGAAAGCCACGCCGGGAAAAAAAATCGTCTATATCACCGCCGGTACCCGGCCTGCGATTGTTGACaa > 1:1266526/1‑235 (MQ=255) tctggtcACCAATTTCTTCCGCGGCTGGGTGACCGATCTGACCACCGCCATTTTTGAGAAAAAGATGGGCA‑TTCAACTTGAACAA‑AAAGTTCACCTGGCAGGAGCAACATCATGACGCATATTCGGATCGAAAAAGGAACGGGTGGCTGGGGCGGCC‑CGCTTGAGCTGAAAGCCAAGCCGGGAAAAAAAATCGTTCATATCACCGCCGGTACCCGGCCTGCCGTTGTTGACAAAcctac > 2:971741/1‑235 (MQ=255) tctggtcACCAATTTCTTCCGCGGCTGGGCGACCGATCTGACCACCGCCATTTTTGAGAAAAAGATGGGCA‑TTCAACTTGAACAA‑AAAGTTCACCTGGCAGGAGCAACATCATGACGCATATTCGGATCGAAAAAGGAACGGGTGGCTGGGGCGGCC‑CGCTTGAGCTGAAAGCCACGCCGGGCAAAAAAATCGTCTATATCACCGCCGGAACCCGGCTGGCGATTGTTGCCAAACTGGc > 2:523977/1‑239 (MQ=255) tggtcACCAATTTCTTCCGCGGCTGGGTGACCGATCTGACCACCGCCATTTTTGAGAAAAAGATGGGCA‑TTCAACTTGAACAA‑AAAGTTCACCTGGCAGGAGCAACATCATGACGCATATTCGGATCGAAAAAGGAACGGGTGGCTGGGGCGGCC‑CGCTTGAGCTGAAAGCCACGCCGGGAAAAAAAATCGTCTATATCACCGCCGGTACCCGGCCTGCGATTGTTGACAAACTGGcac > 2:1966973/1‑239 (MQ=255) gtcACCAATTTCTTCCGCGGCTGGGTGACCGATCTGACCACCGCCATTTTTGAGAAAAAGATGGGCA‑TTCAACTTGAACAA‑AAAGTTCACCTGGCAGGAGCAACATCATGACGCATATTCGGATCGAAAAAGGAACGGGTGGCTGGGGCGGCC‑CGCTTGAGCTGAAAGCCACGCCGGGAAAAAAAATCGTCTATATCACCGCCGGTACCCGGCCTGCGATTGTTGACAAACTGGcaca > 1:1731821/1‑238 (MQ=255) tcACCAATTTCTTCCGCGGCTGGGTGACCGATCTGACCACCGCCATTTTTGAGAAAAAGATGGGCA‑TTCAACTTGAACAA‑AAAGTTCACCTGGCAGGAGCAAcatcat > 2:869034/1‑108 (MQ=255) tcACCAATTTCTTCCGCGGCTGGGTGACCGATCTGACCACCGCCATTTTTGAGAAAAAGATGGGCA‑TTCAACTTGAACAA‑AAAGTTCACCTGGCAGGAGCAACATCATGACGCATATTCGGATCGAAAAAGGAACGGGTGGCTGGGGCGGCC‑CGCtt > 1:2146192/1‑157 (MQ=255) tcACCAATTTCTTCCGCGGCTGGGTGACCGATCTGACCACCGCCATTTTTGAGAAAAAGATGGGCA‑TTCAACTTGAACAA‑AAAGTTCACCTGGCAGGAGCAACATCATGACGCATATTCGGATCGAAAAAGGAACGGGTGGCTGGGGCGGCC‑CGCTTGAGCTGAAAGCCACGCCGGGAAAAAAAATCGTCTATATCACCGCCGGTACCCGGCCTGCGATTGTTGACAAACTGGcaca > 1:934348/1‑237 (MQ=255) tcACCAATTTCTTCCGCGGCTGGGTGACCGATCGGACCACCGCCATTTTTGAGAAAAAGATGGGCA‑TTCAACTTGAACAA‑AAAGTTCACCTGGCAGGAGCAAcatcat < 1:869034/108‑1 (MQ=255) tcCGCGGCTGGGTGACCGATCTGACCACCGCCATTTTTGAGAAAAAGATGGGCA‑TTCAACTTGAACAA‑AAAGTTCACCTGGCAGGAGCAACATCATGACGCATATTCGGATCGAAAAAGGAACGGGTGGCTGGGGCGGCC‑CGCTTGAGCTGAAAGCCACGCCGGGAAAAAAAATCGTCTATATCACCGCCGGTACCCGGCCTGCGATTGTTGACAAACTGGCACAGCTTACtggctggc > 1:1369391/1‑239 (MQ=255) cgcgGCTGGGTGACCGATCTGACCACCGCCATTTTTGAGAAAAAGATGGGCA‑TTCAACTTGAACa > 2:3178594/1‑65 (MQ=255) cgcgGCTGGGTGACCGATCTGACCACCGCCATTTTTGAGAAAAAGATGGGCA‑TTCAACTTGAACa < 1:3178594/65‑1 (MQ=255) cgcgGCTGGGTGACCGATCTGACCACCGCCATTTTTGAGAAAAAGATGGGCA‑TTCAACTTGAACAA‑AAAGTTCACCTGGCAGGAGCAAca > 2:464143/1‑90 (MQ=255) cgcgGCTGGGTGACCGATCTGACCACCGCCATTTTTGAGAAAAAGATGGGCA‑TTCAACTTGAACAA‑AAAGTTCACCTGGCAGGAGCAAca < 1:464143/90‑1 (MQ=255) cgcgGCTGGGTGACCGATCTGACCACCGCCATTTTTGAGAAAAAGATGGGCA‑TTCAACTTGAACAA‑AAAGTTCACCTGGCAGGAGCAACATCATGACGCATATTCGGATCGAAAAAGGAACGGGTGGCTGGGGCGGCC‑CGCTTGAGCTGAAAGCCACGCCGGGAAAAAAAATCGTCTATATCACCGCCGGTACCCGGCCTGCGATTGTTGACAAACTGGCACAGCTTACTGGCTGGCAg > 1:3148685/1‑239 (MQ=255) | TCCGATGACCCTAAGCCTGGGTCGCTTTATGCCGGAAAAGTACAAACCCAGCTACTACGCGGCGGCCTCTTATAGCTGCCACTCAATGAATGGCCTCTTCCCCCAT‑ATCAACCCTGGCGAAC‑TG‑TTTGTTTATCTTGGCATTGCCAGCGG‑TCTGACAA‑CGCTGAACCTGCCACTTGGCCCAC‑TGGCGGTGAGTTATCTGCTGGTTGGTCTGGTCACCAATTTCTTCCGCGGCTGGGTGACCGATCTGACCACCGCCATTTTTGAGAAAAAGATGGGCA‑TTCAACTTGAACAA‑AAAGTTCACCTGGCAGGAGCAACATCATGACGCATATTCGGATCGAAAAAGGAACGGGTGGCTGGGGCGGCC‑CGCTTGAGCTGAAAGCCACGCCGGGAAAAAAAATCGTCTATATCACCGCCGGTACCCGGCCTGCGATTGTTGACAAACTGGCACAGCTTACTGGCTGGCAGGCTATTGAC > NC_000913/2826074‑2826547 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 6 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |