Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,862,6670GA31.8% 57.5 / 10.5 44pseudogene (937/1617 nt)glvCpseudogene, arbutin specific enzyme IIC component of PTS;enzyme; Transport of small molecules: Carbohydrates, organic acids, alcohols; PTS system, arbutin‑like IIB component; PTS system, arbutin‑like IIC component
Reads supporting (aligned to +/- strand):  ref base G (21/9);  new base A (0/14);  total (21/23)
Fisher's exact test for biased strand distribution p-value = 8.12e-06
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.26e-01
Rejected as consensus: Frequency below/above cutoff threshold.

TGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGG‑TAAAACCTAGTCAATCAG‑ACCTCCGCCCATGTT‑GCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGG‑CCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGG‑TTCGGTAATTCCCACCAGCATGGC‑GGTTAA‑GGTTGCGGGAATCAGC‑AAGCCCG‑CCA‑C‑TTTTACCCGATTTTCCGGTGCGGCAGTGAAGTAC‑ATCGCTAAAGAAATG‑CCCACGGCACCAAAGATTTTTGAGTTACCGTG‑CA‑GGGCAAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGACCAAAGATAAACTGTCCGTAGATGA  >  NC_000913/3862430‑3862903
                                                                                                                                                                                                                                                    |                                                                                                                                                                                                                                                    
tGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGG‑TAAAACCTAGTCAATCAG‑ACCTCCGCCCATGTT‑GCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGG‑CCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGG‑TTCGGTAATTCCCACCAGCATGGC‑GGTTAA‑GGTTGCGGGa                                                                                                                                                                                                                                                     <  2:184913/239‑1 (MQ=255)
                    atatCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGG‑TAAAACCTAGTCAATCAG‑ACCTCCGCCCATGTT‑GCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGG‑CCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGG‑TTCGGTAATTCCCACCAGCATGGC‑GGTTAA‑AGTGTCGGGGATAAGC‑AAGCCCG‑ccc                                                                                                                                                                                                                                   >  1:1447203/1‑234 (MQ=255)
                     tatCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGG‑TAAAACCTAGTCAATCAG‑ACCTCCGCCCATGTT‑GCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGG‑CCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGG‑TTCGGTAATTCCCACCAGCATGGC‑GGGTAA‑AGGTGGGGGGAACCGA‑AAAGCCG‑CCA‑C‑cttt                                                                                                                                                                                                                            >  1:904526/1‑239 (MQ=255)
                           cgTGGTTGCTGAACATCGGGATCCAGTTTTGCGG‑TAAAACCTAGTCAATCAG‑ACCTCTGCCCATGTT‑GCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGG‑CCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGG‑TTCGGTAATTCCCACCAGCATGGC‑GGGTAA‑AGTTGGGGGGAACAAC‑AAACCCG‑CCC‑C‑CTTTTccc                                                                                                                                                                                                                        >  1:561426/1‑237 (MQ=255)
                           cgTGGTTGCTGAACATCGGGATCCAGTTTTGCGG‑TAAAACCTAGTCAATCAG‑ACCTCCGCCCATGTT‑GCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGG‑CCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGG‑TTCGGTAATTCCCACCAGCATGGC‑GGTTAA‑AGGTGTGGGGATCAAC‑AAACCCGCCCC‑C‑TTTTAccca                                                                                                                                                                                                                       >  1:114555/1‑238 (MQ=255)
                              ggTTGCTGAACATCGGGATCCAGTTTTGCGG‑TAAAACCTAGTCAATCAG‑ACCTCCGCCCATGTT‑GCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGG‑CCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGG‑TTCGGTAATTCCCACCAGCATGGC‑GGTTTA‑GGGGGGGGGGAAAAGC‑AAACCCG‑CCC‑C‑TTTTACCCgcgtt                                                                                                                                                                                                                   >  1:579312/1‑235 (MQ=255)
                                 tGCTGAACACCGGGAGCCAGTTTGGCGA‑AAAACCCTATACAATCCG‑CCCCCCGCCCTTGTC‑CCCCACACCACAAAAGAAATACATTACGGCCGACAGTGAGG‑CCGCCAGCACGGCGTGTACCACAAACAGCAAGGGAAAAAAAAACAGGAAGGTAAATCCCGGCGG‑TTGGGTACTCCCCACCCGCAGGGG‑GTTTAG‑GGGGGGGGGAATAAGC‑AAGCCCG‑CCA‑C‑TTTTACCCGATTTTc                                                                                                                                                                                                                 <  2:27641/238‑1 (MQ=255)
                                                     gttggggg‑TAAAACCTACGCAATCCGCCCCCCCGCCAATGTG‑CCCCACCACACCAAAGAAATACATTCGGGGCGACATGGGGG‑CCGCCAGCAGGGCGTGCACCGAAAACAGCACGGGAAAAAGGAAAGGAAAGTTAAATTCCGGGGG‑TTGGGTAATCCCCACCAGCAGGGG‑GTTTAG‑GGTGGGGGAAATAAGC‑AACCCCG‑CCA‑C‑TTTTACCCGATTTTCCGGTGCGGCAGTGAAGTAC‑a                                                                                                                                                                                            <  2:1073521/233‑1 (MQ=255)
                                                      tttGGGG‑AAAAACCTAG‑CCATCCA‑CCCCCCCCCCATGTTCGCCCCCCCCCCAAAAGAAAAACATTACGG‑CGACAATGGGGCCCGCAGGCCCGGGGTGTACCGAAACCAGCAACGTGAAAATGAACAGGAAGGAAAATCCCAGGGG‑TTCGGTAATCCCCCCCAGCGTGGG‑GGTTAG‑GGTGGGGGAAATAAGA‑AAGCCCG‑CCA‑C‑TTTTACCCGATTTTCCGGTGCGGCAGTGAAGTAC‑At                                                                                                                                                                                           <  2:1467764/238‑1 (MQ=255)
                                                      tttGCGGATAAACCCAAGCCAATCAG‑CCCCCTGCCCTTGTT‑GCCCCCCACACAAAAGAGATACATGCGGGACAGCATGGGGC‑CCCCCAGCAGGGGGGGTACCACAAACAGCAACGGTAAAATGAGCGGGAAGGTAATTTCCAGGGT‑TTCGTTAATCCCCACCAAGAGGGC‑GGTAAG‑GGTGGGGGAAATCAGC‑AGCCCCG‑CCA‑C‑TTTTACCCGATTTTCCGGTGCGGCa                                                                                                                                                                                                       <  2:1398875/228‑1 (MQ=255)
                                                                            tCAG‑ACCTCCGCCCATGTT‑GCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGG‑CCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGG‑TTCGGTAATTCCCACCAGCATGGC‑GGGTAA‑AGGTGCGGGGAATAGC‑AAACCCC‑CCA‑CTTTTTACCCGTTTTTCC‑GTGCGGGCGTGGAGGAC‑ATCGCTAAAAAAAAC‑CCCACCGc                                                                                                                                                                     >  1:1490662/1‑238 (MQ=255)
                                                                                                     cacacaccaAAGACTTAACTTAGGGTCGACATGGGGG‑CCGCCAGCGGGGCGTGACCCAAAAACAGAAAGGGAAAAAGAAACAGAAAGGAAAATCCCGGCGG‑TTCGTTAACCCCCCCCAGCGTGGG‑GGTAAG‑GGGTGCGGGAACCAGC‑AAGCCCG‑CCA‑C‑TTTTACCCGATTTTCCGGTGCGGCAGTGAAGTAC‑ATCGCTAAAGAAATG‑CCCACGGCACCAAAGATTTTTGAGTTACCGTg                                                                                                                                             <  2:904526/237‑1 (MQ=255)
                                                                                                      ccacaccaAAGAGATACATTACGGTCGACATTGAGG‑CCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGG‑TTCGGTAATTCCCACCAGCATGGC‑GGGTAA‑GGGTGTGGGGAACAACAAAACCCC‑CCC‑C‑TTTTCCCCATTTTTCCGG‑GCGGCAGGGAAAATA‑ATAGCCTAAGAAAAGACCCCCGGACCCACAGATTTTTTAGTTACCggt                                                                                                                                             >  2:1162498/1‑237 (MQ=255)
                                                                                                         caccaAAGAGATACATTACGGTCGACATTGAGG‑CCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGG‑TTCGGTAATTCCCACCAGCATGGCGGGTTAT‑GGTTGGGGGagcaa                                                                                                                                                                                                                                                 >  2:288618/1‑138 (MQ=255)
                                                                                                          ccaaaaGATAAACATTCCGGTCGACTTGGGGC‑CCGCCAGCGGGGCGTGACCCAAAAACAGCAAGGGTAAAAAAAAAGGGAAGTAAAATCCCGGCGG‑TTGGGTAATCCCCCCCAGCAGGGC‑GGTTAG‑GGTGGGGGAAATCAAA‑AAGCCCG‑CCA‑C‑TTTTACCCGATTTTCCGGTGCGGCAGTGAAGTAc                                                                                                                                                                                              <  2:1276587/184‑1 (MQ=255)
                                                                                                                   aTACATTACGGTCGACATTGAGG‑CCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGG‑TTCGGTAATTCCCACCAGCATGGC‑GGTTAA‑AGGTGCGGGAAAAAACAAAACCCC‑CCC‑C‑TTTTACCC‑ATTTTTCGGGGGGGCAGTGAAATAC‑ATCGCTCAAGAAAAA‑CCCACGGCCCCAAAAATTTTTTAGTTAACCTG‑CA‑GGGGAAAACCg                                                                                                                              >  2:290015/1‑238 (MQ=255)
                                                                                                                    tACATTACGGTCGACATTGAGG‑CCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGG‑TTCGGTAATTCCCACCAGCATGGC‑GGTTAA‑AGTTTCGGGGATCAGC‑AAACCCG‑CCA‑C‑TTTTACCCCATTTTTCCGTGCGGCAGGGGAGGAA‑ATCGCTtaaa                                                                                                                                                                                   >  1:1276587/1‑186 (MQ=255)
                                                                                                                         tACGGTCGACATTGAGG‑CCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGG‑TTCGGTAATTCCCACCAGCATGGC‑GGGTAA‑GGTTTCGGGGATAAGC‑AAACCCC‑CCC‑C‑CTTTTCCCGATTTTCCGGGGCGGCGGGGAAGGAC‑a                                                                                                                                                                                            >  1:635479/1‑173 (MQ=255)
                                                                                                                              tCGACATTGAGG‑CCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGG‑TTCGGTAATTCCCACCAGCATGGC‑GGGTAA‑GGGTGCGGGGAACAGC‑AAGCCCGCCCC‑C‑TTTAACCCAATTTTCCGG‑GCGGCCGGGAAgga                                                                                                                                                                                               >  1:347580/1‑164 (MQ=255)
                                                                                                                                 aCATTGAGG‑CCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGG‑TTCGGTAATTCCCACCAGCATGGC‑GGTTAA‑GGGTGCGGGGAATAGC‑AAGCCCG‑CCACC‑TTTTTCCGGATTTTcg                                                                                                                                                                                                                >  1:213663/1‑146 (MQ=255)
                                                                                                                                     tGAGG‑CCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGG‑TTCGGTAATTCCCACCAGCATGGCGGGTTAA‑GG‑TGTGGGGAACAAA‑AAACCCC‑CCA‑C‑CTTTTCCCCCATTTCCGGGGGGGCCGTGAAAAACAAACCCAAAAAAAAAC‑CCCCCGGCCCCAAAAATTTTTG‑GTTTACATG‑CACGGCCAAAACCCCCTTCCGGGaacaa                                                                                                                >  2:1561387/1‑235 (MQ=255)
                                                                                                                                        gg‑CCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGG‑TTCGGTAATTCCCACCAGCATGGCGGGTTAA‑GGTTGGGGGAA‑AAGG‑AAAACCG‑CCA‑C‑CTTTACCCCATTTTTCGGGGCGGGAGGGGAGGAA‑ATTGCCAaaaaaaaacccc                                                                                                                                                                          >  1:147953/1‑170 (MQ=255)
                                                                                                                                                       cgtcgaCCGAAAACAGCAGAGGAAAAATAAACAAG‑AGGGAAAATCCAGGGGTTTGGGTAATCCCCCCCAGCATGGG‑GTTTAG‑GGTGGCGGGAATCAGC‑AACCCCG‑CCA‑C‑TTTTACCCGATTTTCCGGTGCGGCAGTGAAGTAC‑ATCGCTAAAGAAATG‑CCCACGGCACCAAAGATTTTTGAGTTACCGTG‑CA‑GGGCAAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCt                                                                                           <  2:1490662/233‑1 (MQ=255)
                                                                                                                                                                   aCAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGG‑TTCGGTAATTCCCACCAGCATGGC‑GGTTTA‑AGTTGCGGGGATCAGC‑AAACCCC‑CCC‑C‑CTTTACCCCATTTTCCGGGGCGGCAGTGGAGGAA‑ATCGCCAAAGAAATG‑CCCACGGCACCAAAAATTTTTTTGTTACCGTg                                                                                                                                             >  1:1089524/1‑178 (MQ=255)
                                                                                                                                                                            gTGAAATGAACAGGAAGGTAAATTCCAGCGG‑TTCGGTAATTCCCACCAGCATGGC‑GGTTAA‑AGGTTCGGGAATCAGC‑AAGACCGCCCC‑C‑TTTTACCC‑ATTTTTCGGGGCGGCCGGGAAGTAC‑ATCGCTAAAAAAAAA‑CCCCCCGCCACAAAAATTTTTTAGTTTCCGCGCCG‑GGGAAAAACCCCCTTCCGGGAAAAAC‑ATTTTAACGGCCTCGCGCTCCAACAGAAcaccttccgaa                                                                       >  2:1066940/1‑227 (MQ=255)
                                                                                                                                                                                  tGAACAGGAAGATAAATCCCGGCGG‑TTCGGTAATCCCCACCAGCATGGG‑GGTTAG‑GGTTGGGGAAACCAGC‑AAGCCCG‑CCA‑C‑TTTTACCCGATTTTCCGGTGCGGCAGTGAAGTAC‑ATCGCTAAAGAAATG‑CCCACGGCACCAAAGATTTTTGAGTTACCGTG‑CA‑GGGCAAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTGCGcc                                                               <  1:224484/239‑1 (MQ=255)
                                                                                                                                                                                  agAACGGGAAGGTAAATCCCGGGGG‑TCGGGTAATCCCCACCAGTATGGC‑GGTTAA‑GGTGGGGGAAAGCAGA‑AAGCCCG‑CCA‑C‑TTTTACCCGATTTTCCGGTGCGGCAGTGAAGTAC‑ATCGCTAAAGAAATG‑CCCACGGCACCAAAGATTTTTGAGTTACCGTG‑CA‑GGGCAAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTGCGcc                                                               <  1:774962/238‑1 (MQ=255)
                                                                                                                                                                                    aaaggaaagaaaaaTCCCGGGGG‑TTCGGTATTCCCCACCAGCAGGGG‑GGTTAA‑GGTTGGGGAAATCAGA‑AAGCCCG‑CCA‑C‑TTTTACCCGATTTTCCGGTGCGGCAGTGAAGTAC‑ATCGCTAAAGAAATG‑CCCACGGCACCAAAGATTTTTGAGTTACCGTG‑CA‑GGGCAAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTGCGcc                                                               <  1:14256/226‑1 (MQ=255)
                                                                                                                                                                                         gaattaaaaTTGCGGCGG‑TGTGGTAATCCCCACCAGCGTGG‑‑GGTTAAGGGTTGGGGAAACCAGA‑AGCCCCG‑CCA‑C‑TTTTACCCGATTTTCCGGTGCGGCAGTGAAGTAC‑ATCGCTAAAGAAATG‑CCCACGGCACCAAAGATTTTTGAGTTACCGTG‑CA‑GGGCAAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTGCGCCCAGTa                                                          <  1:159368/231‑1 (MQ=255)
                                                                                                                                                                                          aaGTTAAATTCCAGCGG‑TTCGTTAATCCCCCCCAGCTTGGC‑GGTTAA‑GGTGGCGGAAATCACA‑AAGCCCG‑CCA‑C‑TTTTACCCGATTTTCCGGTGCGGCAGTGAAGTAC‑ATCGCTAAAGAAATG‑CCCACGGCACCAAAGATTTTTGAGTTACCGTG‑CA‑GGGCAAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTGCGCCCAg                                                            <  1:290015/234‑1 (MQ=255)
                                                                                                                                                                                                 ttcccAGCGT‑TTCGGTTATCCCCCCCAGCAGGGC‑GTTTAG‑GGTTGGGGGAATCAGC‑AGGCCCG‑CCA‑C‑TTTTACCCGATTTTCCGGTGCGGCAGTGAAGTAC‑ATCGCTAAAGAAATG‑CCCACGGCACCAAAGATTTTTGAGTTACCGTG‑CA‑GGGCAAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATg                                                <  1:1162498/236‑1 (MQ=255)
                                                                                                                                                                                                    tccggcttttaggTAATGCCCACCAGCGTGGT‑GTGTAT‑GGTTGCGGAAATCAAC‑AGGCCCG‑CCA‑C‑TTTTACCCGATTTTCCGGTGCGGCAGTGAAGTAC‑ATCGCTAAAGAAATG‑CCCACGGCACCAAAGATTTTTGAGTTACCGTG‑CA‑GGGCAAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATg                                                <  1:988040/226‑1 (MQ=255)
                                                                                                                                                                                                       gCGG‑TTCGGTAATTCCCACCAGCATGGC‑GGTTAA‑GGGTGGGGGGATCAGC‑AAGCCCC‑CCC‑C‑CTTTACCCGATTTTTCGGGGCGGGAGGGAAGTAA‑ATCGCCAAAAAAAAG‑CCCACGGCCCCAAAGAATTTTTAGTTACCGGG‑CA‑GGGGAAAACCCCCTTCCGGGAACAACGAATTCAGCGGCCCGGCGCTCCCAACGAAATCTTTTAGAAGCTGCGCCCCGTAAAACCGAATGCCGCCt                                          >  2:1040929/1‑239 (MQ=255)
                                                                                                                                                                                                               ggTAATCCCCCCCAGAAGGGC‑GGTTAA‑GGTTGCGGAAATAAGC‑AAGCCCG‑CCA‑C‑TTTTAcc                                                                                                                                                                                                                         <  1:405493/61‑1 (MQ=255)
                                                                                                                                                                                                                    ccccccccACCATGGC‑GGTTAG‑GGTTGGGGAAAACAGC‑AGCCCCG‑CCA‑C‑TTTTACCCGATTTTCCGGTGCGGCAGTGAAGTAC‑ATCGCTAAAGAAATG‑CCCACGGCACCAAAGATTTTTGAGTTACCGTG‑CA‑GGGCAAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGcc                              <  1:1411799/237‑1 (MQ=255)
                                                                                                                                                                                                                        cccgaggaTGGG‑GGTTAG‑GGTGGGGGGAATCAGA‑AACCCCG‑CCA‑C‑TTTTACCCGATTTTCCGGTGCGGCAGTGAAGTAC‑ATCGCTAAAGAAATG‑CCCACGGCACCAAAGATTTTTGAGTTACCGTG‑CA‑GGGCAAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGAc                          <  1:333249/232‑1 (MQ=255)
                                                                                                                                                                                                                           ccagagggggggTTGA‑GGTTGGGGAAATCAGC‑AAGCCCG‑CCA‑C‑TTTTACCCGATTTTCCGGTGCGGCAGTGAAGTAC‑ATCGCTAAAGAAATG‑CCCACGGCACCAAAGATTTTTGAGTTACCGTG‑CA‑GGGCAAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGACCa                        <  1:1304340/229‑1 (MQ=255)
                                                                                                                                                                                                                                   c‑GGTTAG‑GTTTGGGGAAACCAGA‑AACCCCG‑CCA‑C‑TTTTACCCGATTTTCCGGTGCGGCAGTGAAGTAC‑ATCGCTAAAGAAATG‑CCCACGGCACCAAAGATTTTTGAGTTa                                                                                                                                                  <  1:1612183/110‑1 (MQ=255)
                                                                                                                                                                                                                                      gTTAG‑GGTGGGGGGATCCAGC‑ATGACCG‑CCA‑C‑TTTTACCCGATTTTCCGGTGCGGCAGTGAAGTAC‑ATCGCTAAAGAAATG‑CCCACGGCACCAAAGATTTTTGAGTTACCGTG‑CA‑GGGCAAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGaa                                                                                  <  2:1213647/170‑1 (MQ=255)
                                                                                                                                                                                                                                        aaa‑GGTGGCGGGAATCAGA‑AGGCCCG‑CCA‑C‑TTTTACCCGATTTTCCGGTGCGGCAGTGAAGTAC‑ATCGCTAAAGAAATG‑CCCACGGCACCAAAGATTTTTGAGTTACCGTG‑CA‑GGGCAAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGACCAAAGATAAACTGTc           <  1:467194/238‑1 (MQ=255)
                                                                                                                                                                                                                                         gaggggggggggAACCAGC‑ACGCCCG‑CCA‑C‑TTTTACCCGATTTTCCGGTGCGGCAGTGAAGTAC‑ATCGCTAAAGAAATG‑CCCACGGCACCAAAGATTTTTGAGTTACCGTG‑CA‑GGGCAAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGACCAAAGATAAACTGTc           <  1:1040929/230‑1 (MQ=255)
                                                                                                                                                                                                                                                gCGGGAATCAGC‑AAGCCCG‑CCA‑C‑TTTTACCCGATTTTCCGGTGCGGCAGTGAAGTa                                                                                                                                                                                               >  2:1062317/1‑56 (MQ=255)
                                                                                                                                                                                                                                                gCGGGAATCAGC‑AAGCCCG‑CCA‑C‑TTTTACCCGATTTTCCGGTGCGGCAGTGAAGTa                                                                                                                                                                                               <  1:1062317/56‑1 (MQ=255)
                                                                                                                                                                                                                                                 cGGGAATCAGC‑AAGCCCG‑CCA‑C‑TTTTACCCGATTTTCCGGTGCGGCAGTGAAGTAC‑ATCGCTAAAGAAATG‑CCCACGGCACCAAAGATTTTTGAGTTACCGTG‑CA‑GGGCAAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGa                                                                        >  1:1213647/1‑170 (MQ=255)
                                                                                                                                                                                                                                                 cGGGAATCAGC‑AAGCCCG‑CCA‑C‑TTTTACCCGATTTTCCGGTGCGGCAGTGAAGTAC‑ATCGCTAAAGAAATG‑CCCACGGCACCAAAGATTTTTGAGTTACCGTG‑CA‑GGGCAAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGACCAAAGATAAACTGTCCGTAGATg   >  1:1325144/1‑239 (MQ=255)
                                                                                                                                                                                                                                                  gggAATCAGC‑AAGCCCG‑CCA‑C‑TTTTACCCGATTTTCCGGTGCGGCAGTGAAGTAC‑a                                                                                                                                                                                            >  1:305617/1‑56 (MQ=255)
                                                                                                                                                                                                                                                  gggAATCAGC‑AAGCCCG‑CCA‑C‑TTTTACCCGATTTTCCGGTGCGGCAGTGAAGTAC‑ATCGCTAAAGAAATG‑CCCACGGCACCAAAGAttt                                                                                                                                                          >  1:1064023/1‑89 (MQ=255)
                                                                                                                                                                                                                                                  gggAATCAGC‑AAGCCCG‑CCA‑C‑TTTTACCCGATTTTCCGGTGCGGCAGTGAAGTAC‑ATCGCTAAAGAAATG‑CCCACGGCACCAAAGATTTTTGAGTTACCGTG‑CA‑GGGCAAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGACCAAAGATAAACTGTCCGTAGATGa  >  1:1534457/1‑239 (MQ=255)
                                                                                                                                                                                                                                                    |                                                                                                                                                                                                                                                    
TGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGG‑TAAAACCTAGTCAATCAG‑ACCTCCGCCCATGTT‑GCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGG‑CCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGG‑TTCGGTAATTCCCACCAGCATGGC‑GGTTAA‑GGTTGCGGGAATCAGC‑AAGCCCG‑CCA‑C‑TTTTACCCGATTTTCCGGTGCGGCAGTGAAGTAC‑ATCGCTAAAGAAATG‑CCCACGGCACCAAAGATTTTTGAGTTACCGTG‑CA‑GGGCAAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGACCAAAGATAAACTGTCCGTAGATGA  >  NC_000913/3862430‑3862903

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 6 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑