| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 827,507 | 0 | T | G | 34.4% | 132.3 / 12.1 | 61 | D492A (GAC→GCC) | ybhF | putative ABC transporter ATPase |
| Reads supporting (aligned to +/- strand): ref base T (3/37); new base G (21/0); total (24/37) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.66e-13 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
TCGTGGATCAACTGAATAAAGGCTTGCTCCATGGTGGGATCGGGTTGCTCATCGTTAGCCGACTGTGCTTTCAAATCGTCCGGCGTGCCGCTGGCGATTAATTTCCCGCGGTACACCAGGCCGATGCGGTCGCAATATTCCGCTTCATCCATAAAGTGGGTGGTGACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGGTCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGTTCATGCATCA‑GCGAACAGGCCAGCGCCAG‑CCGCTGT‑TTAAAACCTAATGGCAGTTCATCGGT‑GGCGTGGGAGGCGATACTTTTCAGGCCGAACGCCTCGCTCATGCGGGAGATTTTTTCGTTCTGCGCCCGACCGCGTAAGCCATACACACCAGAGAAAAAGCGTAAATTCTGTTCGACCGTCAGGTTACCGTA > NC_000913/827273‑827742 | tCGTGGATCAACTGAATAAAGGCTTGCTCCATGGTGGGATCGGGTTGCTCATCGTTAGCCGACTGTGCTTTCAAATCGTCCGGCGTGCCGCTGGCGATTAATTTCCCGCGGTACACCAGGCCGATGCGGTCGCAATATTCCGCTTCATCCATAAAGTGGGTGGTGACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGGTCAAc > 1:21820/1‑239 (MQ=255)tCGTGGATCAACTGAATAAAGGCTTGCTCCATGGTGGGATCGGGTTGCTCATCGTTAGCCGACTGTGCTTTCAAATCGTCCGGCGTGCCGCTGGCGATTAATTTCCCGCGGTACACCAGGCCGATGCGGTCGCAATATTCCGCTTCATCCATAAAGTGGGTGGTGACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGGGCaa > 1:591317/1‑238 (MQ=255) ttGCTCCATGGTGGGATCGGGTTGCTCATCGTTAGCCGACTGTGCTTTCAAATCGTCCGGCGTGCCGCTGGCGATTAATTTCCCGCGGTACACCAGGCCGATGCGGTCGCAATATTCCGCTTCATCCATAAAGTGGGTGGTGACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGGTCAACGCCGGAAGTCGGTTCGTCGAGaa < 2:591317/239‑1 (MQ=255) tGCTCCATGGTGGGATCGGGTTGCTCATCGTTAGCCGACTGTGCTTTCAAATCGTCCGGCGTGCCGCTGGCGATTAATTTCCCGCGGTACACCAGGCCGATGCGGTCGCAATATTCCGCTTCATCCATAAAGTGGGTGGTGACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGGGGGGGGCAACGCCCGAAGTCGGtgttccgggaaa > 2:649151/1‑228 (MQ=255) tGCTCCATGGTGGGATCGGGTTGCTCATCGTTAGCCGACTGTGCTTTCAAATCGTCCGGCGTGCCGCTGGCGATTAATTTCCCGCGGTACACCAGGCCGATGCGGTCGCAATATTCCGCTTCATCCATAAAGTGGGTGGTGACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGGGTGGGGGGCAAGGCCGGAAGACGGTtcgtcgcgga > 2:1145007/1‑234 (MQ=255) tGCTCCATGGTGGGATCGGGTTGCTCATCGTTAGCCGACTGTGCTTTCAAATCGTCCGGCGTGCCGCTGGCGATTAATTTCCCGCGGTACACCAGGCCGATGCGGTCGCAATATTCCGCTTCATCCATAAAGTGGGTGGTGACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGGGGGGGGGGGCACGCCGGGAGACGGGTCGTGGGGaaa > 2:1369491/1‑239 (MQ=255) tGCTCCATGGTGGGATCGGGTTGCTCATCGTTAGCCGACTGTGCTTTCAAATCGTCCGGCGTGCCGCTGGCGATTAATTTCCCGCGGTACACCAGGCCGATGCGGTCGCAATATTCCGCTTCATCCATAAAGTGGGTGGTGACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGGGGGGGGGGCGACGCCGGGAGGCGGGtctgcgcggaa > 2:266503/1‑230 (MQ=255) ttcATTGTGGGATCGGGTTGCTCATCGTTAGCCGACTTTGCTTTCAAAGCGTCCGGCGTGCCGCTGGCGATTAATTTCCCGCGGTACACCAGGCCGATGCGGTCGCAATATTCCGCTTCATCCATAAAGTGGGTGGTGACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGGTCAACGCCGGAAGTCGGTTCGTCGAGAAACa < 2:1222529/236‑1 (MQ=255) gtggGATCGGGTTGCTCATCGTTAGCCGACTGTGCTTTCAAATCGTCCGGCGTGCCGCTGGCGATTAATTTCCCGCGGTACACCAGGCCGATGCGGTCGCAATATTCCGCTTCATCCATAAAGTGGGTGGTGACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGGTCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTc < 2:1075816/239‑1 (MQ=255) tggGATCGGGTTGCTCATCGTTAGCCGACTGTGCTTTCAAATCGTCCGGCGTGCCGCTGGCGATTAATTTCCCGCGGTACACCAGGCCGATGCGGTCGCAATATTCCGCTTCATCCATAAAGTGGGTGGTGACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGGTCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTc < 1:158198/238‑1 (MQ=255) gggATCGGGTTGCTCATCGTTAGCCGACTGTGCTTTCAAATCGTCCGGCGTGCCGCTGGCGATTAATTTCCCGCGGTACACCAGGCCGATGCGGTCGCAATATTCCGCTTCATCCATAAAGTGGGTGGTGACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGGTCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCg < 2:1441742/239‑1 (MQ=255) cTCATCGTTAGCCGACTGTGCTTTCAAATCGTCCGGCGTGCCGCTGGCGATTAATTTCCCGCGGTACACCAGGCCGATGCGGTCGCAATATTCCGCTTCATCCATAAAGTGGGTGGTGACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGGGGGGGGGGGAACGCCGGAAGTCGGTTCGTTGAGGAAAAAAATGTTCGGGTCACGccac > 1:930886/1‑235 (MQ=255) cTCATCGTTAGCCGACTGTGCTTTCAAATCGTCCGGCGTGCCGCTGGCGATTAATTCCCCGCGGTACACCAGGCCGATGCGGTCGCAATATTCCGCTTCAGCCATAGAGTGGGTGGTGACCATCACCGTGACGCCTTTCTCTCCCATGCTGTGGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGGTCAGCGCCGGAAGTCGGTTCGTCGAGAAACAGAACGTCCGGTACATGCATCa < 2:592460/239‑1 (MQ=255) cGTTAGCCGACTGTGCTTTCAAATCGTCCGGCGTGCCGCTGGCGATTAATTTCCCGCGGTACACCAGGCCGATGCGGTCGCAATATTCCGCTTCATCCATAAAGTGGGTGGTGACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGGGCAATCCCGGGAATGGGTTCGTCGGAGAACAGAATATCTCGTgcatgcatgaccggc > 2:809796/1‑232 (MQ=255) gCCGACTGTGCTTTCAAATCGTCCGGCGTGCCGCTGGCGATTAATTTCCCGCGGTACACCAGGCCGATGCGGTCGCAATATTCCGCTTCATCCATAAAGTGGGTGGTGACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGGGGGGGGGGCAAACCCGGGAGGCGGTTCGTCGGGAAAAAGAAAGTCCGGGTCATGCATCA‑CCggaaaag > 1:1078478/1‑232 (MQ=255) cTGTGCTTTCAAATCGTCCGGCGTGCCGCTGGCGATTAATTTCCCGCGGTACACCAGGCCGATGCGGTCGCAATATTCCGCTTCATCCATAAAGTGGGTGGTGACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGGGAGGGGGGCAACGACGGAAGGCGGGTTGTCCAGAAAACGAATTGCCGCGTCATGCATCA‑ACGCACAAgccacc > 1:981038/1‑236 (MQ=255) gtgCTTTCAAATCGTCCGGCGTGCCGCTGGCGATTAATTTCCCGCGGTACACCAGGCCGATGCGGTCGCAATATTCCGCTTCATCCATAAAGTGGGTGGTGACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGGTCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGTTCATGCATCA‑GCGAACAGgccagcgcc < 1:1145007/239‑1 (MQ=255) ttCAAATCGTCCGGCGTGCCGCTGGCGATTAATTTCCCGCGGTACACCAGGCCGATGCGGTCGCAATATTCCGCTTCATCCATAAAGTGGGTGGTGACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGGTCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGTTCATGCATCA‑GCGAACAGGCCAGCGCCAG‑CCg < 1:1046597/239‑1 (MQ=255) aaTTTCCCGCGGTACACCAGGCCGATGCGGTCGCAATATTCCGCTTCATCCATAAAGTGGGTGGTGACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGGTCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGTTCATGCATCA‑GCGAACAGGCCAGCGCCAG‑CCGCTGT‑TTAAAACCTAATGGCAGTTCATCGGt < 1:649151/239‑1 (MQ=255) tACACCAGGCCGATGCGGTCGCAATATTCCGCTTCATCCATAAAGTGGGTGGTGACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGGTCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGTTCATGCATCA‑GCGAACAGGCCAGCGCCAG‑CCGCTGT‑TTAAAACCTAATGGCAGTTCATCGGT‑GGCGTGGGAgg < 1:266503/238‑1 (MQ=255) cacCAGGCCGATGCGGTCGCAATATTCCGCTTCATCCATAAAGTGGGTGGTGACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGGTCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGTTCATGCATCA‑GCGAACAGGCCAGCGCCAG‑CCGc < 1:910020/196‑1 (MQ=255) aTGCGGTCGCAATATTCCGCTTCATCCATAAAGTGGGTGGTGACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGGGGGGGGGGCCAAGGCGGAAAGCGGGTTGTCGAGAAAAAGAAAGTCCGGGTTATGCATCA‑GCGAAAAGAGCAGCGCCCG‑CCGCCGG‑TTTAAAAATAAAGGGCGGTCTCCGGG‑GGCGTGGGGGGGGAGAAttttttg > 2:584847/1‑236 (MQ=255) aTGCGGTCGCAATATTCCGCTTCATCCATAAAGTGGGTGGTGACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGGGGGGGGGGCAACGCCGGAAGTCGGTTTGTCGAGAAACAGAAAGTCCGGGTCATGCATAC‑GCGAACAAGCCCGCGCCAG‑CCGCCGT‑TTAAAAc > 2:910020/1‑196 (MQ=255) tGCGGTCGCAATATTCCGCTTCATCCATAAAGTGGGTGGTGACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGGGGGGGGGGCAACGCCCGCAAGCGGGTCGTCGAGAAAAAAAATGTCCGGGTCATTCATCC‑ACGAAACAGCCAGCCCCCGCCCCCTGT‑TTAAAACCAAAAGCCAGTTCATCGGG‑GGGGGGGGGGGGGGAACTTTCCAg > 2:1423494/1‑239 (MQ=255) ggTCGAAATTTTCCGCTTCCTCCATAAAGTGGGTGGTGACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGGTCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGTTCATGCATCA‑GCGAACAGGCCAGCGCCAG‑CCGCTGT‑TTAAAACCTAATGGCAGTTCATCGGT‑GGCGTGGGAGGCGATACTTTTCAGGCCg < 2:929714/239‑1 (MQ=255) tCGCAATATTCCGCTTCATCCATAAAGTGGGTGGTGACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGGTCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGTTCATGCATCA‑GCGAACAGGCCAGCGCCAG‑CCGCTGT‑TTAAAACCTAATGGCAGTTCATCGGT‑GGCGTGGGAGGCGATACTTTTCAGGCCGa < 2:272081/238‑1 (MQ=255) gCAATATTCCGCTTCATCCATAAAGTGGGTGGTGACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGGTCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGTTCATGCATCA‑GCGAACAGGCCAGCGCCAG‑CCGCTGT‑TTAAAACCTAATGGCAGTTCATCGGT‑GGCGTGGGAGGCGATACTTTTCAGGCCGAACg < 2:21820/239‑1 (MQ=255) atcttCCGCTTCATCCATAAAGTGGGTGGTGACCATCACCGTGACGCCGTGCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGGTCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGTTCATGCATCA‑GCGAACAGGCCAGCGCCAG‑CCGCTGT‑TTAAAACCTAATGGCAGTTCATCGGT‑GGCGTGGGAGGCGATACTTTTCAGGCCGAACGCCt < 2:443394/236‑1 (MQ=255) ttCATCCATAAAGTGGGTGGTGACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGGGGGGGGGGCAACGCCGGAAGGCGGGTCGTCGGGAAACAGAAAGTCCGGGTCCTTGATCACCCGAAAAGCCACGCCCCAC‑CCCCGTT‑TTAAAACC‑AATAGCAGTTAATCGGG‑GGGCGGGGGGGGGGTACTTTTTAGGCCGAAGGccccccctctcg > 2:796252/1‑229 (MQ=255) ccATAAAGTGGGTGGTGACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGTGGGTCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGTTCATGCATCA‑GCGAACAGgccagcgccag‑c < 1:34099/158‑1 (MQ=255) ccATAAAGTGGGTGGTGACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGGTCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTc < 1:653249/124‑1 (MQ=255) ccATAAAGTGGGTGGTGACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGGTCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGTTCATGCATCA‑GCGAACAGGCCAGCGCCAG‑CCGCTGT‑TTAAAACCTAATg < 1:623741/177‑1 (MQ=255) ggtggtGACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGGGGGGGTGAACGCCGGGAGGCGGTTCGTCGAGAAACAGAAAGTCCGGGTCATGCATCA‑GCGAAAAGGGCCGCGCCAG‑CCGCTGT‑TTTAAAACTAAAGGCAGTTCATc > 2:623741/1‑177 (MQ=255) ggtggtGACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGGGGGGGGGGCAACGCCGGGAGTCGGGTCGTCGAGAAACAGAATGTCCGGGTCTTGc > 2:653249/1‑124 (MQ=255) ggtggtGACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGGGGGGGGGGCAACGCCGGAAGGCGGGTTGTCGGGAAAAAGAAAGTCCGGGTCATTCCTCC‑CCGAAAAGGCCCACGCCCG‑CCCCCGT‑TTAAAACCTAATTGCCGGTCCTCTGTGGGGGTGGGGGGGGGGA‑TTTTTTGGCCGCACGCCCCGCCCCTTCGGGGGGTTTTTTTGt > 2:665822/1‑239 (MQ=255) tgACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGGTCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGTTCATGCATCA‑GCGAACAGGCCAGCGCCAG‑CCg < 1:462708/145‑1 (MQ=255) aCCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGGTCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGTTCATGCATCA‑GCGAACAGGCCAGCGCCAG‑CCGCTGT‑TTAAAACCTAATGGCAGTTCATCGGt < 1:1602168/173‑1 (MQ=255) aCCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGGTCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGTTCATGCATCA‑GCGAACAGGCCAGCGCCAG‑CCGCTGT‑TTAAAACCTAATGGCAGTTCATCGGT‑GGCGTGGGAGGCGATACTTTTCAGGCCGAACGCCTCGCTCATGCGGGAGAttttt < 1:894486/228‑1 (MQ=255) ccATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGGGGGGGGCCACCCCGGGAGGCGGGTTGTCGAGAAAACAAAAGTCCGGGTCATGCATCA‑ACGGAAAAGCCAGCGCCAC‑CCGCGGTGTTAAAACC‑AATAGCAGTTCATCGGG‑GGCGGGGGGGGCGGTCGTTTTTTGGGCGCACGCCCCCCTCATCCGGGGGGGTTTTTTGTTCTtcgc > 2:1565001/1‑238 (MQ=255) tCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGGTCAACGCCGGAAGTCGGTTCGGCGAGAAACAGAATGTCCGGTTCATGCATCA‑GCGAACAGGCCAGCGCCAG‑CCGCTGT‑TTAAAACCTAATGGCAGTTCATCGGT‑GGCGTGGGAGGCGATACTTTTCAGGCCGAACGCCTCGCTCATGCGGGAGATTTTTTCGTTCTGCGCCCGa < 2:782900/239‑1 (MQ=255) cGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGGTCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGTTCATGCATCA‑GCGAACAGGCCAGCGCCAG‑CCGCTGT‑TTAAAACCTAATGGCAGTTCATCGGT‑GGCGTGGGAGGCGATACTTTTCAGGCCGAACGCCTCGCTCATGCGGGAGATTTTTTCGTTCTGCGCCCGACcgc < 2:1584118/239‑1 (MQ=255) tGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGGGGGGGGGGGAACGCCGGGGGACAGGTCTGCGGGAAACAGAAATTTCTGTTACTATATCA‑GCGCACCGGCCCGCGCCAG‑CCGCTGT‑GTTAAAACTAAAGACAGTTTCTAGGG‑GGGGAGGGGGGGGGTACTTTTTATGCCCGAAGCCCCCCTCCCTCGGGGGATGTTTTTGTTCtttg > 2:894486/1‑225 (MQ=255) cGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGGTCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGTTCa < 1:1276416/101‑1 (MQ=255) cGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGGTCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGTTCATGCATCA‑GCGAACAGGCCAGCGCCAG‑CCGCTGT‑TTAAAACCTAATGGCAGTTCATCGGT‑GGCGTGGGAGGCGATACTTTTCAGGCCGAACGCCTCGCTCATGCGGGAGATTTTTTCGTTCTGCGCCCGACCGCGTAAg < 1:665822/239‑1 (MQ=255) ttCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGGTCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGt < 1:871507/93‑1 (MQ=255) ctctACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGGTCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGTTCATGCATCA‑GCGAACAGGCCAGCGCCAG‑CCGCTGT‑TTAAAACCTAATGGCAGTTCATCGGT‑GGCGTGGGAGGCGATACTTTTCAGGCCGAACGCCTCGCTCATGCGGGAGATTTTTTCGTTCTGCGCCCGACCGCGTAAGCCATaca < 1:1496804/239‑1 (MQ=255) ccctACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGGTCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGTTCATGCATCA‑GCGAACAGGCCAGCGCCAG‑CCGCTGT‑TTAAAACCTAATGGCAGTTCATCGGT‑GGCGTGGGAGGCGATACTTTTCAGGCCGAACGCCTCGCTCATGCGGGAGATTTTTTCGTTCTGCGCCCGACCGCGTAAGCCATaca < 2:1390922/237‑1 (MQ=255) tACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGGTCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTc < 1:1172572/84‑1 (MQ=255) tACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGGGGGGGGGGGAAAGCCCGGAGGCGGGTCGTCGGGAAAAAGAATGTCCGGGTTATTCATCc‑gcg > 2:1276416/1‑101 (MQ=255) tGCTGTTGATGTGCAGCCAAAATTCACGGCGGGGGGGGGGGGCAACGCCGGAAGGCGGGTCGTCGCGAAACAGAATTTTCGGTGCGTGCATcc > 2:871507/1‑92 (MQ=255) cTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGGTCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGTTCATg < 1:356536/86‑1 (MQ=255) tGTTGATGTGCAGCGAAAATTCACGGCGGGTGAGGGGGTCAACGCCGGAAGTCGGTGCGTCGAGAAACAGAATGTCCGGTTCATGCATCA‑GCGAACAGGCCAGCGCCAG‑CCGCTGT‑TTAAAACCTAATGGCAGTTCATCGGT‑GGCGTGGGAgg < 1:741508/153‑1 (MQ=255) ttGATGTGCAGCCAAAATTCACGGCGGGGGGGGGGGGTGACGCCCGAAGGCGGTTCTTCGGGAAACAGAATGACCGGGTCATGc > 2:1172572/1‑84 (MQ=255) aTGTGCAGCCAAAATTCACGGCGGGTGAGGGGGTCAACGCCGGAAGTCGGtt < 1:919330/52‑1 (MQ=255) gCAGCCAAAATTCACGGCGGGGGGGGGGGGGAAAGCCCGGAGACGGTTCGTTGAGAAACAGAAATCCCGGTTCATTCAACA‑ACGaa > 2:356536/1‑86 (MQ=255) tCACGGCGGGTGAGGGGGTCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGTTCATGCATCA‑GCGAACAGGCCAGCGCCAG‑CCGCTGT‑TTAAAACCTAATGGCAGTTCATCGGT‑GGCGTGGGAGGCGATACTTTTCAGGCCGAACGCCTCGCTCATGCGGGAGATTTTTTCGTTCTGCGCCCGACCGCGTAAg < 1:1374315/201‑1 (MQ=255) tCACGGCGGGTGAGGGGGTCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGTTCATGCATCA‑GCGAACAGGCCAGCGCCAG‑CCGCTGT‑TTAAAACCTAATGGCAGTTCATCGGT‑GGCGTGGGAGGCGATACTTTTCAGGCCGAACGCCTCGCTCATGCGGGAGATTTTTTCGTTCTGCGCCCGACCGCGTAAGCCATACACACCAGAGAAAAAGCGTAAATTCTGTTCGAc < 1:182825/239‑1 (MQ=255) cggcggGTGAGGGGGTCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGTTCATGCATCA‑GCGAACAGGCCAGCGCCAG‑CCGCTGT‑TTAAAACCTAATGGCAGTTCATCGGT‑GGCGTGGGAGGCGATACTTTTCAGGCCGAACGCCTCGCTCATGCGGGAGATTTTTTCGTTCTGCGCCCGACCGCGTAAGCCATACACACCAGAGAAAAAGCGTAAATTCTGTTCGACCGt < 1:205599/239‑1 (MQ=255) cggGTGAGGGGGTCAACTCCGGAAGGCGGGTCGGCGAGAAACAGAATGTCCGGTTCATGCATCA‑GCGAACAGGCCTGCGCCAG‑CCGCTGT‑TTAAAACCTAATGGCAGTTCATCGGT‑GGCGTGGGAGGCGATACTTTTCAGGCCGAACGCCTCGCTCATGCGGGAGATTTTTTCGTTCTGCGCCCGACCGCGTAAGCCATACACACCAGAGAAAAAGCGTAAATTCTGTTCGACCGTCa < 2:864057/238‑1 (MQ=255) cggGTGAGGGGGTCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGTTCATGCATCA‑GCGAACAGGCCAGCGCCAG‑CCGCTGT‑TTAAAACCTAATGGCAGTTCATCGGT‑GGCGTGGGAGGCGATACTTTTCAGGCCGAACGCCTCGCTCATGCGGGAGATTTTTTCGTTCTGCGCCCGACCGCGTAAGCCATACACACCAGAGAAAAAGCGTAAATTCTGTTCGACCGTCa < 1:638593/238‑1 (MQ=255) ggTCAACGCCGGAAGGCGGGTCGTCGAGAAACAGAATGTCCGGGTCATGCATCA‑GCGAACAGGCCAGCGCCAG‑CCGCTGT‑TTAAAACCTAATGGCAGTTCATCGGT‑GGCGGGGGAGGGGGTAATTTTCAGGCCGAACGCCTCGCTCATGCGGGGGATTTTTTCGGTCTGCGCCCGACCGCGGAAGCCATAAACACCAGAGAAAAAGCGGAAATTATGGTCGAACGTCAGGTTAACGTa > 2:638593/1‑238 (MQ=255) tCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGTTCATGCATCA‑GCGAACAGGCCAGCGCCAG‑CCGCTGT‑TTAAAACCTAATGGCAGTTCATCGGT‑GGCGTGGGAGGCGATACTTTTCAGGCCGAACGCCTCGCTCATGCGGGAGATTTTTTCGTTCTGCGCCCGACcgc > 2:612405/1‑178 (MQ=255) tCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGTTCATGCATCA‑GCGAACAGGCCAGCGCCAG‑CCGCTGT‑TTAAAACCTAATGGCAGTTCATCGGT‑GGCGTGGGAGGCGATACTTTTCAGGCCGAACGCCTCGCTCATGCGGGAGATTTTTTCGTTCTGCGCCCGACcgc < 1:612405/178‑1 (MQ=255) | TCGTGGATCAACTGAATAAAGGCTTGCTCCATGGTGGGATCGGGTTGCTCATCGTTAGCCGACTGTGCTTTCAAATCGTCCGGCGTGCCGCTGGCGATTAATTTCCCGCGGTACACCAGGCCGATGCGGTCGCAATATTCCGCTTCATCCATAAAGTGGGTGGTGACCATCACCGTGACGCCTTTCTCTACCATGCTGTTGATGTGCAGCCAAAATTCACGGCGGGTGAGGGGGTCAACGCCGGAAGTCGGTTCGTCGAGAAACAGAATGTCCGGTTCATGCATCA‑GCGAACAGGCCAGCGCCAG‑CCGCTGT‑TTAAAACCTAATGGCAGTTCATCGGT‑GGCGTGGGAGGCGATACTTTTCAGGCCGAACGCCTCGCTCATGCGGGAGATTTTTTCGTTCTGCGCCCGACCGCGTAAGCCATACACACCAGAGAAAAAGCGTAAATTCTGTTCGACCGTCAGGTTACCGTA > NC_000913/827273‑827742 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 6 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |