| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 2594348 = | 110 (0.770) | 5 (0.040) | 5/314 | NT | 5.1% | coding (1512/2016 nt) | tmcA | elongator methionine tRNA (ac4C34) acetyltransferase |
| ? | NC_000913 | 2594774 = | 84 (0.630) | coding (1086/2016 nt) | tmcA | elongator methionine tRNA (ac4C34) acetyltransferase | |||||
GTTTTCGTCGCCCGCGGGGTAATCTGGTGGCCCAGTCGCTGGCGGCGCACGGCAACAATCCACTGGCGGCGACATTGCGTGGACGGCGGGTCAGCCGGATAGCAGTTCATCCGGCTCGTCAGCGGGAAGGCACAGGGCGGCAACTTATTGCTGGTGCTTTGCAATATACGCAAGACCTCGACTATCTTTCGGTGAGTTTTGGTTACACCGGGGAGTTATGGCGTTTCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/2594577‑2594348‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgtttctgg‑ATCGCTTTGCCATAACGTCTGTTCAAATGCGGAAATGACAATATTGCCTTGTGGTGTATGGGTGAAGTTTTCATCGTCAAAAACCAGTGCCTCGCTGACCATTTTTTCCAGCGGGCATCCCTGCGCCCAGCGGATCGGCTGTTGCAGTTCAAAACGGTGTAAATGCGGAAAGCGAGCGCA‑AAATTTCAGCAAAAAACCACGTCCGGTGCCTTCGTAGCCCTGCACCG > NC_000913/2594774‑2595000 GTTTTCGTCGCCCGCGGGGTAATCTGGTGGCCCAGTCGCTGGCGGCGCACGGCAACAATCCACTGGCGGCGACATTGCGTGGACGGCGGGTCAGCCGGATAGCAGTTCATCCGGCTCGTCAGCGGGAAGGCACAGGGCGGCAACTTATTGCTGGGGCTTTGCAATATACGCCAGACCTCGACTACCTTTCGGTGAGTTTTGGTTACACCGGGGAGTTATGGCGTTTCT > 1:551752/1‑228 TTTTCGTCGCCCGCGGGGTAATCTGGTGGCCCAGTCGCTGGCGGCGCACGGCAACAATCCACTGGCGGCGACATTGCGTGGACGGCGGGTCAGCCGGATAGCAGTTCATCCGGCTCGTCAGCGGGAAGGGACAGGGCGGCAACTTATTGCTGGTGCTTTGCAATATACGCAAGACCTCGACTATCTTTCGGTGAGGTTTGGTTACACCGGGGAGTTATGGCGTTTCTG > 1:1294068/1‑228 TTTTCGTCGCCCGCGGGGTAATCTGGTGGCCCAGTCGCTGGCGGCGCACGGCAACAATCCACTGGCGGCGACATTGCGTGGACGGCGGGTCAGCCGGATAGCAGTTCATCCGGCTCGTCAGCGGGAAGGCACAGGGCGGCAACTTATTGCTGGTGCTTTGCAATATACGCAAGACCTCGACTATCTTTCGGTGAGTTTTGGTTACACCGGGGAGTTATGGCGTTTCTG > 1:528722/1‑228 CGGCGACATTGCGTGGACGGCGGGTCAGCCGGATAGCAGTTCATCCGGCTCGTCAGCGGGAAGGCACAGGGCGGCAACTTATTGCTGGTGCTTTGCAATATACGCAAGACCTCGACTATCTTTCGGTGAGTTTTGGTTACACCGGGGAGTTATG < 2:1254329/154‑1 GGAAGGCACAGGGCGGCAACTTATTGCTGGTGCTTTGCAATATACGCAAGACCTCGACTATCTTTCGGTGAGTTTTGGTTACACCGGGGAGTTATGGCGTTTCTGG‑ATCGCTTTGCCATAACGTCTGTTCAAATGCGGAAATGACAATATTG > 2:1597092/1‑152 GAAGGCACAGGGCGGCAACTTATTGCTGGTGCTTTGCAATATACGCAAGACCTCGACTATCTTTCGGTGAGTTTTGGTTACACCGGGGAGTTATGGCGTTTCTGG‑ATCGCTTTGCCATAACGTCTGTTCAAATGCGGAAATGACAATATTGC < 1:1599926/152‑1 AGGCACAGGGCGGCAACTTATTGCTGGTGCTTTGCAATATACGCAAGACCTCGACTATCTTTCGGTGAGTTTTGGTTACACCGGGGAGTTATG > 1:1686919/1‑93 GGCACAGGGCGGCAACTTATTGCTGGTGCTTTGCAATATACGCAAGACCTCGACTATCTTTCGGTGAGTTTTGGTTACACCGGGGAGTTATGG < 2:1683941/93‑1 TTGCAATGTACGGAAGGCCTCGACTAGCTTTCGGTGAGTTTTGGTTCCACCGGGGAGTTATGGCGTTTCTGGCAACGCTTTGCCATAACGTCTGTTCAAATGCGGAAATGACAATATTGCCTTGTGGTGTATGGGTGAAGTTTTCATCGTCAAAAACCAGTGCCTCGCTGACCATTTTTTCCAGCGGGCATCCCTGCGCCCAGCGGATCGGCTGTTGCAGTTCAAAAC < 2:1067542/228‑1 ACCTCGACTATCTTTCGGTGAGTTTTGGTTACACCGGGGAGTTATGGCGTTTCTGG‑ATCGCTTTGCCATAACGTCTGTTCAAATGCGGAAATGACAATATTGCCTTGTGGTG > 1:1628530/1‑112 CCTCGACTATCTTTCGGTGAGTTTTGGTTACACCGGGGAGTTATGGCGTTTCTGG‑ATCGCTTTGCCATAACGTCTGTTCAAATGCGGAAATGACAATATTGCCTTGTGGTGT < 2:1625650/112‑1 CGTTTCTGG‑ATCGCTTTGCCATAACGTCTGTTCAAATGCGGAAATGACAATATTGCCTTGTGGTGTATGGGTGAAGTTTTCATCGTCAAAAACCAGTGCCTCGCTGACCATTTTTTCCAGCGGGCATCCCTGCGCCCAGCGGATCGGCTGTTGCAGTTCAAAACGGTGTAAATGCGGAAAGCGAGCGCA‑AAATTTCAGCAAAAAACCACGTCCGGTGCCTTCGTAGCC < 1:1138536/228‑1 CGTTTCTGG‑ATCGCTTTGCCATAACGTCTGTTCAAATGCGGAAATGACAATATTGCCTTGTGGTGTATGGGTGAAGTTTTCATCGTCAAAAACCAGTGCCTCGCTGACCATTTTTTCCAGCGGGCATCCCTGCGCCCAGCGGATCGGCTGTTGCAGTTCAAAACGGTGTAAATGCGGAAAGCGAGCGCA‑AAATTTCAGCAAAAAACCACGTC > 1:873963/1‑212 CGTTTCTGG‑ATCGCTTTGCCATAACGTCTGTTCAAATGCGGAAATGACAATATTGCCTTGTGGTGTATGGGTGAAGTTTTCATCGTCAAAAACCAGTGCCTCGCTGACCATTTTTTCCAGCGGGCATCCCTGCGCCCAGCGGATCGGCTGTTGCAGTTCAAAACGGGGTAAATGCGGAAAGCGAGCGCA‑AAATTTCAGCAAAAAACCACGTCCGGTGCCTTCGTAGCC > 1:132659/1‑228 GTTTCTGG‑ATCGCTTTGCCATAACGTCTGTTCAAATGCGGAAATGACAATATTGCCTTGTGGTGTATGGGTGAAGTTTTCATCGTCAAAAACCAGTGCCTCGCTGACCATTTTTTCCAGCGGGCATCCCTGCGCCCAGCGGATCGGCTGTTGCCGTTtcaa > 2:500322/1‑157 GTTTCTGG‑ATCGCTTTGCCATAACGTCTGTTCAAATGCGGAAATGACAATATTGCCTTGTGGTGTATGGGTGAAGTTTTCATCGTCAAAAACCAGTGCCTCGCTGACCATTTTTTCCAGCGGGCATCCCTGCGCCCAGCGGATCGGCTGTTGCAGTTCAAAACGGTGTAAATGCGGAAAGCGAGCGCA‑AAATTTCAGCAAAAAACCACGTCCGG > 2:255460/1‑214 GTTTCTGG‑ATCGCTTTGCCATAACGTCTGTTCAAATGCGGAAATGACAATATTGCCTTGTGGTGTATGGGTGAAGTTTTCATCGTCAAAAACCAGTGCCTCGCTGACCATTTTTTCCAGCGGGCATCCCTGCGCCCAGCGGATCGGCTGTTGCAGTTCAAAACGGTGTAAATGCGGAAAGCGAGCGCA‑AAATTTCAGCAAAAAACCACGTCC < 2:872441/212‑1 GTTTCTGG‑ATCGCTTTGCCATAACGTCTGTTCAAATGCGGAAATGACAATATTGCCTTGTGGTGTATGGGTGAAGTTTTCATCGTCAAAAACCAGTGCCTCGCTGACCATTTTTTCCAGCGGGCATCCC > 1:902612/1‑129 TTTCTGG‑ATCGCTTTGCCATAACGTCTGTTCAAATGCGGAAATGACAATATTGCCTTGTGGTGTATGGGTGAAGTTTTCATCGTCAAAAACCAGTGCCTCGCTGACCATTTTTTCCAGCGGGCATCCCTGCGCCCAGCGGATCGGCTGTTGCAGTTCAAAACGGTGTAAATGCGGAAAGCGAGCGCA‑AAATTTCAGCAAAAAACCACGTCCGGT < 1:255891/214‑1 TTTCTGG‑ATCGCTTTGCCATAACGTCTGTTCAAATGCGGAAATGACAATATTGCCTTGTGGTGTATGGGTGAAGTTTTCATCGTCAAAAACCAGTGCCTCGCTGACCATTTTTTCCAGCGGGCATCCCTGCGCCCAGCGGATCGGCTGTTGCAGTTCAAAA < 1:501137/161‑1 TTTCTGG‑ATCGCTTTGCCATAACGTCTGTTCAAATGCGGAAATGACAATATTGCCTTGTGGTGTATGGGTGAAGTTTTCATCGTCAAAAACCAGTGCCTCGCTGACCATTTTTTCCAGCGGGCATCCCT < 2:901034/129‑1 CTGG‑ATCGCTTTGCCATAACGTCTGTTCAAATGCGGAAATGACAATAGTGCCTTGTGGTGTATGGGTGAAGTTTTCATCGTCAAAAACCAGTGCCTCGCTGACCATTTTTTCCAGCGGGCATCCCTGCGCCCAGCGGATCGGCTGTTGCAGTTCAAAACGGTGTAAATGCGGAAAGCGAGCGCA‑AAATTTCAGCAAAAAACCACGTCCGGTGCCTTCGTAGCCCTGCA < 2:210856/228‑1 G‑ATCGCTTTGCCATAACGTCTGTTCAAATGCGGAAATGACAATATTGCCTTGTGGTGTATGGGTGAAGTTTTCATCGTCAAAAACCAGTGCCTCGCTGACCATTTTTTCCAGCGGGCATCCCTGCGCCCAGCGGATCGGCTGTTGCAGTTCAAAACGGTGTAAATGCGGAAAGCGAGGCCACAAATTTC‑GCAAAAAACCACGTTCGGTGCCTTCGGAGACCTGtcccg > 2:2038913/1‑223 GTTTTCGTCGCCCGCGGGGTAATCTGGTGGCCCAGTCGCTGGCGGCGCACGGCAACAATCCACTGGCGGCGACATTGCGTGGACGGCGGGTCAGCCGGATAGCAGTTCATCCGGCTCGTCAGCGGGAAGGCACAGGGCGGCAACTTATTGCTGGTGCTTTGCAATATACGCAAGACCTCGACTATCTTTCGGTGAGTTTTGGTTACACCGGGGAGTTATGGCGTTTCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/2594577‑2594348‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgtttctgg‑ATCGCTTTGCCATAACGTCTGTTCAAATGCGGAAATGACAATATTGCCTTGTGGTGTATGGGTGAAGTTTTCATCGTCAAAAACCAGTGCCTCGCTGACCATTTTTTCCAGCGGGCATCCCTGCGCCCAGCGGATCGGCTGTTGCAGTTCAAAACGGTGTAAATGCGGAAAGCGAGCGCA‑AAATTTCAGCAAAAAACCACGTCCGGTGCCTTCGTAGCCCTGCACCG > NC_000913/2594774‑2595000 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |