| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,297,688 | T→C | 10.0% | M151V (ATG→GTG) | yraQ ← | putative inner membrane permease |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,297,688 | 0 | T | C | 10.0% | 170.7 / 2.3 | 62 | M151V (ATG→GTG) | yraQ | putative inner membrane permease |
| Reads supporting (aligned to +/- strand): ref base T (36/19); new base C (2/5); total (38/24) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 9.75e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TCCATAGCGCCCTGCCCCAGCGGCTAAAAAACCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCTGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCAGCGTCGCAATCAGCAACACCATCACCAGCCCGGCCACCAGACGAATCGCCGCAAAACCCCAGCCGAGGACAAAGCCCATAAACACCAGCGTCGCCGGGTTTAA‑CACC‑GGATTGCCCATCCAGAATGCCAGCGCACCGCCCATCGACACCTGTTGGCGACGCATTCCCGCCGCGACCGGAGCCGCACAGCAGGTACACATCATGCCCGGCAACGAAAACAGCGTTCCCAGCAGCGTGCCGCGAAAGCGCGATTGCCCAAGCGTACGCAACAACCAGTCACGCGGGATCAGCACCTGAATCAACGAACCGAGGATCACCCCCAGCACCGCCGCTTTCCATACC > NC_000913/3297463‑3297911 | tCCATAGCGCCCTGCCCCAGCGGCTAAAAAACCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCTGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCAGCGTCGCAATCAGCAACACCATCACCAGCCCGGCCACCAGACGAATCGCCGCAAAACCCCAGCCGAGGACAAAGCCCATAAACACCAGCGTCGCCGGGGTTAA‑CACC‑GGATTGACCATc > 1:1293830/1‑227 (MQ=255) catgggccccGGCCCCCGCGGCTAAAAAACCCGCCCTGTACTACCGGTATGTCAATTTCGACCGGTGCCTGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCAGCGTCGCAATCAGCAACACCATCACCAGCCCGGCCACCAGACGAATCGCCGCAAAACCCCAGCCGAGGACAAAGCCCATAAACACCAGCGTCGCCGGGTTTAA‑CACC‑GGATTGCCCATCCAg < 2:1435982/221‑1 (MQ=255) tAGCGCCCTGCCCCAGCGGCTAAAAAACCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCTGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCAGCGTCGCAATCAGCAACACCATCACCAGCCCGGCCACCAGACGAATCGCCGCAAAACCCCAGCCGAGGACAAAGCCCATAAACACCAGCGTCGCCGGGTTTAA‑CACC‑GGATTGCCCATCCAGaa < 1:707148/228‑1 (MQ=255) tGCCCCAGCGGCTAAAAAACCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCTGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCAGCGTCGCAATCAGCAACACCATCACCAGCCCGGCCACCAGACGAATCGCCGCAAAACCCCAGCCGAGGACAAAGCCCATAAACACCAGCGTCGCCGGGTTTAA‑CACC‑GGATTGCCCATCCAGACTGCCAgcg > 1:1576531/1‑228 (MQ=255) ccccAGCGGCTAAACAACCCGCCCGGTGCTTCCGGTATGTCAATTTCGACCGGTGCCTGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCAGCGTCGCAATCAGCAACACCATCACCAGCCCGGCCACCAGACGAATCGCCGCAAAACCCCAGCCGAGGACAAAGCCCATAAACACCAGCGTCGCCGGGTTTAA‑CACC‑GGATTGCCCATCCAGAATGCCAGCGCa < 1:702097/228‑1 (MQ=255) ccccAGCGGCTAAAAAACCCGCCCTGTGCTTCCGGGATGTCAATTTCGACCGGTGCCTGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCAGCGTCGCAATCAGCAACACCATCACCAGCCCGGCCACCAGACGAATCGCCGCAAAACCCCAGCCGAGGACAAAGCCCATCAACACCAGCGTCGCCGGGTTTAA‑CACC‑GGATTGCCCATCCACGAAGCCAgcgc > 1:1702821/1‑227 (MQ=255) gCGGCTAAAAAACCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCTGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCAGCGTCGCAATCAGCAACACCATCACCAGCCCGGCCACCAGACGAATCGCCGCAAAACCCCAGCCGAGGACAAAGCCCATAAACACCAGCGTCGCCGGGTTTAA‑CACC‑GGATTGCCCATCCAGAATGCCAGCGCACCGcc < 1:1961339/228‑1 (MQ=255) ggCTAAACACCCCGCCCTGTGCTTCCGGTATTTCAATTACGACCGGTGCCTGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCAGCGTCGCAATCAGCAACACCATCACCAGCCCGGCCACCAGACGAATCGCCGCAAAACCCCAGCCGAGGACAAAGCCCATAAACACCAGCGTCGCCGGGTTTAA‑CACC‑GGATTGCCCATCCAGAATGCCAGCGCACCGccc < 2:1501191/227‑1 (MQ=255) tAAAAAACCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCTGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCAGCGTCGCAATCAGCAACACCATCACCAGCCCGGCCACCAGACGAATCGCCGCCAAACCCCAGCCGAGGACAAAGCCCATAAACACCAGCGTCGCCGGGCTTAA‑CACC‑GGATTGCCCACCCAGAATGCCAGCGCACCGCCCATc > 1:1410673/1‑227 (MQ=255) acaCCCGCCCGGTGCTTCCGGTATGTCAATTTCGACCGGTGCCTGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCAGCGTCGCAATCAGCAACACCATCACCAGCCCGGCCACCAGACGAATCGCCGCAAAACCCCAGCCGAGGACAAAGCCCATAAACACCAGCGTCGCCGGGTTTAA‑CACC‑GGATTGCCCATCCAGAATGTCAGCGCACCGCCCATCGacac < 1:901044/226‑1 (MQ=255) ccGGTATGTCAATTTCGACCGGTGCCTGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCAGCGTCGCAATCAGCAACACCATCACCAGCCCGGCCACCAGACGAATCGCCGCAAAACCCCAGCCGAGGACAAAGCCCATAAACACCAGCGTCGCCGGGTTTAA‑CACC‑GGATTGCCCATCCAGAATGCCAGCGCACCGCCCATCGACACCTGTTGGCGACGCATTc > 1:785037/1‑228 (MQ=255) atgtaagtgtCGACGGGTGCATGGCTTTGCGTTTTTACACGCACCCATTTTGCCCCCGGCGCCGCAACAAGCAACACCATCCCCAGCCCGGCCACCAGACGAACCGCCGCAAAACCCCAGCCGAGGAAAAAGCCAAAAAACACCAGCGCCGCCGGGTTTAC‑CCCC‑GGATTGCCCACCCAGAATCCCAGCGCCCCGCCCATCGACACCTGTTGGCGACGCATTCccgcc < 2:1824857/219‑1 (MQ=255) acttgcgcgcGGTGCCTCGTTTTGCGGTTTTCCACCCCCCCATTTTTGCCCACGCCTCACAACCAGCACCACCATCACCAGCCCGGCCACCAGACGAACCGCCGCAAACCCCCAGCCGAGGACAAAGCCCAAAAACCCCAGCGTCGCCGGGTTTAA‑CCCC‑GGATTCCCCATCCAAAATGCCAGCGCCCCGCCCATCGACACCTGTTGGCGACGCATTCCCGCCGCGAc < 2:783709/219‑1 (MQ=255) tttCGACCGGTGCCTGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCAGCGTCGCAATCAGCAACACCATCACCAGCCCGGCCACCAGACGAATCGCCGCAAAACCCCAGCCGAGGACAAAGCCCATAAACACCAGCGTCGCCGGGTTTAA‑CACC‑GGATTGCCCATCCAGAATGCCAGCGCACCGCCCATCGACACCTGTTGGCGACGCATTCCCGCCGCGAcc > 1:137848/1‑227 (MQ=255) cccGACCGGGACCTCCGTTTGCGTTGTTTCACGCACCCATTTTTGCCCCAGCGTCGCAATCAGCAACCCCAGCACCAGCCCGGCCACCAGACGAATCGCCGAAAACCCCCAGCCGAGGACAAAGCCCATAAACCCCAGCGTCGCCGGGTTTAA‑CCCC‑GGATTGCCCATCCAGAATGCCGGCGCCCCGCCCATCGACACCTGTTGGCGACGCATTCCCGCCGCGACCgg < 2:1573734/226‑1 (MQ=255) aCCGGTGCCTGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCAGCGTCGCAATCAGCAACACCATCACCAGCCCGGCCACCAGACGAATCGCCGCAAAACCCCAGCCGAGGACAAAGCCCATAAACACCAGCGTCGCCGGGTTTAA‑CACC‑GGATTGCCCATCCAGAATGCCAGCGCACCGCCCATCGACACCTGTTGGCGACGCATTCCCGCCGCGACCGGAGc > 2:199473/1‑227 (MQ=255) tGCCTGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCAGCGTCGCAATCAGCAACACCATCACCAGCCCGGCCACCAGACGAATCGCCGCAAAACCCCAGCCGAGGACAAAGCCCATAAACACCAGCGTCGCCGGGTTTAA‑CACC‑GGATTGCCCATCCAGAATGCCAGCGCACCGCCCATCGACACCCGTTGGCGACGCATTCCCGCCGCGACCGGATCCGcac > 1:553761/1‑227 (MQ=255) tGCGGTGTTTCACGCACCCATTTTTGCACCAGCGTCGCAATCAGCAACACCATCACCAGCCCGGCCACCAGACGAATCGCCGCAAAACCCCAGCCGAGGACAAAGCCCATAAACACCAGCGTCGCCGGGTTTAA‑CACC‑GGATTGCCCACCCAGAATGCCAGCGCACCGCCCATCGACACCTGTTGGCGACGCATTCCCGCCGCGACCGGAGCCGCACAGCAGGTaca > 1:389289/1‑227 (MQ=255) tGCGGTGTTTCACGCACCCATTTTTGCACCAGCGTCGCAATCAGCAACACCATCACCAGCCCGGCCACCAGACGAATCGCCGCAAAACCCCAGCCGAGGACAAAGCCCATAAACACCAGCGCCGCCGGGTTTAA‑CACC‑GGATTGCCCATCCAGAATGCCAGCGCACCGCCCATCGACACCTGTTGGCGACGCATTCCCGCCGCGACCCGAGCCGCACAGCAGGTaca > 1:921524/1‑227 (MQ=255) ggTGTTTCACGCACCCATTTTTGCACCAGCGTCGCAATCAGCAACACCATCACCAGCCCGGCCACCAGACGAATCGCCGCAAAACCCCAGCCGAGGACAAAGCCCATAAACACCAGCGTCGCCGGGTTTAA‑CACC‑GGATTGCCCATCCAGAATGCCAGCGCACCGCCCATCGACACCTGTTGGCGACGCATTCCCGCCCCGACCGGAGCCGCACAGCCGGTACAcat > 2:388877/1‑227 (MQ=255) cGCCCCCATTTTGCCACCAGGGTCGAACTCAGCACCCCCATCCCCAGCCCGCCCACCAGACGACTCGCCGCAAACCCCCAGCCGAGGACAACGCCCAAAACCCCCAGCGTCGCCGGGTTTAC‑CACC‑GGATTGCCCATCCAGAATGCCAGCCCCCCGCCCACCGACCCCTGTTGGCGCCGCATTCCCGCCGCGACCGGAGCCGCACAGCAGGTACACATCATGCCCGGc < 2:140187/228‑1 (MQ=255) aCCCATTTTTGCACCAGCGTCGCAATCAGCAACACCATCACCAGCCCGGCCACCAGACGAATCGCCGCAAAACCCCAGCCGAGGACAAAGCCCATAAACACCAGCGTCGCCGGGTTTAA‑CACC‑GGATTGCCCATCCAGAATGCCAGCGCACCGCCCATCGACACCTGTTGGCGACGCATTCCCGCCGCGACCGGa > 1:466452/1‑195 (MQ=255) tCACCAGCCCGGCCACCAGACGAATCGCCGCAAAACCCCAGCCGAGGACAAAGCCCATAAACACCAGCGTCGCCGGGTTTAA‑CACC‑GGATTGCCCATCCAGAATGCCAGCGCACCGCCCATCGACACCTGTTGGCGACGCATTCCCGCCGCGACCGGAGCCGCACAGCAGGTACACATCATGCCCGGCAACGACAACAGCGTTCCCAGCAGCGTGCCGCGAAAGcgcg > 1:301374/1‑228 (MQ=255) cccGGCCACCAGACGAATCGCCGCAAAACCCCAGCCGAGGACAAAGCCCATAAACACCAGCGTCGCCGGGTTTAA‑CACC‑GGATTGCCCATCCAGAATGCCAGCGCACCGCCCATCGACACCTGTTGGCGACGCATTCCCGCCGCGACCGGAGCCGca > 1:1164494/1‑157 (MQ=255) ccGGCCACCAGACGAACCGCCGCAAACCCCCAGCCGAGGACAAAGCCCAAAAACCCCAGCGTCGCCGGGTTTAA‑CCCC‑GGATGGCCCACCCAGAATGCCAGCGCCCCGCCCATCGACCCCTGTGGGCGACGCATTCCCGCCGCGACCGGAGCCGcac < 2:1162406/157‑1 (MQ=255) cGGCCACCAGACGAATCGCCGCAAAACCCCAGCCGAGGACAAAGCCCATAAACACCAGCGTCGCCGGGTTTAA‑CACC‑GGATTGCCCATCCAGAATGCCAGCGCAc > 2:1382651/1‑105 (MQ=255) ggCCACCAGACGAATCGCCGCAAAACCCCAGCCGAGGACAAAGCCCATAAACACCAGCGTCGCCGGGTTTAA‑CACC‑GGATTGCCCATCCAGAATGCCAGCGCAcc < 1:1385135/105‑1 (MQ=255) gCCACCAGACGAATCGCCGCAAAACCCCAGCCGAGGACAAAGCCCATAAACACCAGCGTCGCCGGGTTTAA‑CACC‑GGATTGCCCATCCAGAATGCCAGCGCACCGCCCATCGACACCTGTTGGCGACGCATTCCCGCCGCGACCGGAGCCGCACAGCAGGTACACATCATGCCCGGCAACGAAAACAGCGTTCCCAGCAGCGTGCCGCGAAAGCGCGATTGCCCAAg > 1:155587/1‑227 (MQ=255) gCCACCAGACGAACCGCCGCAAAACCCCAGCCGAGGACAAAGCCCATAAACACCAGCGTCGCCGGGTTTAA‑CACC‑GGATTGCCCATCCAGAATGCCACCGCACCGCCCATCGACACCTGTTGCCGACGCATTCCCGCCGCGACCGGCGCCGCACAGCAGGTACACATCATGCCCGGCAACGAAAAc > 1:1590362/1‑186 (MQ=255) ccaccaGACAATTCGCCGCAAAACCCCAGCCGAGGACAAAGCCCAAAAACCCCAGCGTCCCCGGTTTTAC‑CACC‑GGATTGCCCCTCCAGAATGCCAGCGCACCGCCCATCGACCCCTGTTGGCGCCCCATTCCCGCCGCGACCGGAGCCGCACAGCAGGTACACATCATGCCCGGCAACGAAAACa < 2:1587539/186‑1 (MQ=255) acaggacaaTCCCCACAAACCCCCAGCCGAGGACAACCCCCAAAAACCCCCGCCTCCCCGGTTTAAA‑CCCC‑GGATTGCCCATCCAGAATGCCCGCCCCCCCCCCATCGACCCCTTTTGCCACCCCATCCCCGCCGCGACCGGAGCCGCACAGCAGGTACACATCATGCCCGGCAACGAAAACAGCGTTCCCAGCAGCGTGCCGCGAAAGCGCGATTGCCCAAGCGTAc < 2:504076/221‑1 (MQ=255) gccgcAAAACCCCAGCCGAGGACAAAGCCCATAAACACCAGCGTCGCCGGGTTTAA‑CACC‑GGATTGCCCATCCAGAATGCCAGCGCACCGCCCATCGACACCTGTTGGCGACGCATTCCCGCCGCGACCGGAGCCGCACAGCAGGTACACATCATGCCCGGCAACGAAAACAGCGTTCCCAGCAGCGTGCCGCGAAAGCGCGATTGCCCAAGCGTACGcaacacaca > 1:450972/1‑223 (MQ=255) aaacCCCCAGCCGAGGACAAAGCCCATAACCCCCAGCGCCGCC‑GGTTTAA‑CCCCGGGATTCCCCATCCAAAACGCCAGCGCCCCCCCCACCGACCCCTGTGGGCGACGCATCCCCGCCGCGACCGGAGCCGCACAGCAGGTACACATCATGCCCGGCAACGAAAACAGCGTTCCCAGCAGCGTGCCGCGAAAGCGCGATTGCCCAAGCGTACGCAACAACCAGTCAcg < 2:919906/228‑1 (MQ=255) aacccccAGCAGAGACAAAAGCCCAAAACCACCAGCCTCCCCGGGTTTAA‑CCCC‑GGTTTGCCACTCCAGACTGCCGGCGCCCCCCCCACCGACCCCTGTTGGCGACGCATGCCCGCCGCGACCGGAGCCGCACAGCAGGTACACATCATGCCCGGCAACGAAAACAGCGTTCCCAGCAGCGTGCCGCGAAAGCGCGATTGCCCAAGCGTACGCAACAACCAGTCAcgc < 2:1791202/225‑1 (MQ=255) aGCCCATAAACACCAGCGTCGCCGGGTTTAA‑CACC‑GGATTGCCCATCCAGAATGCCAGCGCACCGCCCATCGACACCTGTTGGCGACGCATTCCCGCCGCGACCGGAGCCGCACAGCAGGTACACATCATGCCCGGCAACGAAAACAGCGTTCCCAGCAGCGTGCCGCGAACGCGCGATTGCCCAAGCGTACGCAACAACCCGTCACGCGGGATCAGCACCTGAATCa > 1:469748/1‑228 (MQ=255) aGCCCATAAACACCAGCGTCGCCGGGTTTAA‑CACC‑GGATTGCCCATCCAGAATGCCAGCGCACCGCCCATCGACACCTGTTGGCGACGCATTCCCGCCGCGACCGGAGCCGCACAGCAGGTACACATCATGCCCGGCAACGAAAACAGCGTTCCCAGCAGCGTGCCGCGAAAGCGCGATTGCCCAAGCGTACGCAACAACCAGTCAcgc > 1:51282/1‑209 (MQ=255) aGCCCATAAACACCAGCGTCGCCGGGTTTAA‑CACC‑GGATTGCCCATCCAGAATGCCAGCGCACCGCCCATCGACACCTGTTGGCGACGCATTCCCGCCGCGACCGGAGCCGCACAGCAGGTACACATCATGCCCGGCAACGAAAACAGCGTTCCCAGCAGCGTGCCGCGAAAGCGCGATTGCCCAAGCGTACGCAACAACCAGTCACGCGGGATCAGCACCTGAATCa > 1:1551629/1‑228 (MQ=255) aGCCCATAAACACCAGCGTCGCCGGGTTTAA‑CACC‑GGATTGCCCATCCAGAATGCCAGCGCACCGCCCATCGACACCTGTTGGCGACGCATTCCCGCCGCGACCGGAGCCGCACAGCAGGTACACATCATGCCCGGCAACGAAAACAGCGTTCCCAGCAGCGTGCCGCGAAAGCGCGATTGCCCAAGCGTACGCAACAACCAGTCACGCGGGATCAGCACCTGAATCa > 1:83857/1‑228 (MQ=255) aGCCCATAAACACCAGCGTCGCCGGGTTTAA‑CACC‑GGATTGCCCATCCAGAATGCCAGCGCACCGCCCATCGACACCTGTTGGCGACGCATTCCCGCCGCGACCGGAGCCGCACAGCAGGTACACATCATGCCCGGCAACGAAAACAGCGTTCCCAGCAGCGTGCCGCGAAAGCGCGATTGCCCAACCGTACGCAACAACCAGCCACGCGGGGTCAGCACCTGAATCa > 2:1238375/1‑228 (MQ=255) gCCCAAAAACCCCGGCGTCCCGGTGTTTAC‑CCCC‑GGCGTCCCCACCCAGAACGCCAGCCCCCCCCCAACCGACACCGGTGGGCGACGCATTCCCGCCGCGACCGGAGCCGCACAGCAGGTACACATCATGCCCGGCAACGAAAACAGCGTTCCCAGCAGCGTGCCGCGAAAGCGCGATTGCCCAAGCGTACGCAACAACCAGTCACGCGGGATCAGCACCTGAATCaa < 2:552854/228‑1 (MQ=255) cccATAAACACCAGCGTCGCCGGTTTTAA‑CCCC‑GGATTCCCCATCCAGAATGCCAGCGCACCGCCCATCGACCCCTTTGGGCGACGCATTCCCGCCGCGACCGGAGCCGCACAGCAGGTACACATCATGCCCGGCAACGAAAACAGCGTTCCCAGCAGCGTGCCGCGAAAGCGCGATTGCCCAAGCGTACGCAACAACCAGTCACGCGGGATCAGCACCTGAATCaa < 1:529532/227‑1 (MQ=255) aTAAACACCAGCGTCGCCGGGTTTAA‑CACC‑GGATTGCCCATCCAGAATGCCAGCGCACCGCCCATCGACACCTGTTGGCGACGCATTCCCGCCGCGACCGGAGCCGCACAGCAGGTACACATCATGCCCGGCAACGAAAACAGCGTTCCCAGCAGCGTGCCGCGAAAGCGCGATTGCCCAAGCGTACGCAACAACCAGTCACGCGGGATCAGCACCTGAATCAACGa > 1:1111344/1‑227 (MQ=255) aTAAACACCAGCGTCGCCGGGTTTAA‑CACC‑GGATTGCCCATCCAGAATGCCAGCGCACCGCCCATCGACACCTGTTGGCGACGCATTCCCGCCGCGACCGGAGCCGCACAGCAGGTACACATCATGCCCGGCAACGAAAACAGCGTTCCCAGCAGCGTGCCGCGAAAGCGCGATTGCCCAAGCGAACGCACCAACCAGTCACGCGGGATCAGCACCTGAATCACCGa > 1:925967/1‑227 (MQ=255) ccAGCGTCGCCGGGTTTAA‑CACC‑GGATTGCCCATCCAGAATGCCAGCGCACCGCCCATCGACACCTGTTGGCGACGCATTCCCGCCGCGACCGGAGCCGCACAGCAGGTACACATCATGCCCGGCAACGAAAACAGCGTTCCCAGCAGCGTGCCGCGAAAGCGCGATTGCCCAAGCGTACGCAACAACCAGTCACGCGGGATCAGCACCTGAATCAACGAACCGAgg > 1:2038139/1‑227 (MQ=255) cAGCGTCGCCGGGTTTAA‑CACC‑GGATTGCCCATCCAGAATGCCAGCGCACCGCCCATCGACACCTGTTGGCGACGCATTCCCGCCGCGACCGGAGCCGCACAGCAGGTACACATCATGCCCGGCAACGAAAACAGCGTTCCCAGCAGCGTGCCGCGAAAGCGCGATTGCCCAAGCGTACGCAACAACCAGTCACGCGGGATCAGCACCTGAATCAACGAACCGAGGa > 1:1154571/1‑227 (MQ=255) gccgccGCCGGTTTAAA‑CCGC‑GTATTCCCCACCCAGAACCCCCGCGCCCCGCCCCCCGCCACCGGTGCGCGCCCCACTCCCGCCGCGACCGGAGCCGCACAGCAGGTACACATCATGCCCGGCAACGAAAACAGCGTTCCCAGCAGCGTGCCGCGAAAGCGCGATTGCCCAAGCGTACGCAACAACCAGTCACGCGGGATCAGCACCTGAATCAACGAACCg < 2:300862/217‑1 (MQ=255) agccccGCCAGTTTTAC‑CCCC‑GGACTCCCCCTCCAGAATGCCACCGCCCCCCCCCTCGCCCCTGGTCGCCCACGCATCCCCGCCGCGACCGGAGCCGCACAGCAGGTACACATCATGCCCGGCAACGAAAACAGCGTTCCCAGCAGCGTGCCGCGAAAGCGCGATTGCCCAAGCGTACGCAACAACCAGTCACGCGGGATCAGCACCTGAATCAACGAACCGAGGATc < 2:1109352/223‑1 (MQ=255) gCGTCGCCGGGTTTAA‑CACC‑GGATTGCCCATCCAGAATGCCAGCGCACCGCCCATCGACACCTGTTGGCGACGCATTCCCGCCGCGACCGGAGCCGCACAGCAGGCACACATCATGCCCGGCAACGAAAACAGCGTTCCCAGCAGCGTGCCGCCAAAGCCCGATTGCCCAACCGTACGCAACAACCCGTCACCCGGGAACAGCACCTGAATCAACGAACCGCGGAACa > 1:1942526/1‑228 (MQ=255) cGTCGCCGGGTTTAA‑CCCC‑GGATTCCCCATCCAGAATGCCAGCGCCCCGCCCATCGACCCCTGTTGGCGCCGCATCCCCGCCGCGACCGGAGCCGCACAGCAGGTACACATCATGCCCGGCAACGAAAACAGCGTTCCCAGCAGCGTGCCGCGAAAGCGCGATTGCCCAAGCGTACGCAACAACCAGTCACGCGGGATCAGCACCTGAATCAACGAAcc < 2:1939082/219‑1 (MQ=255) cGTCGCCGGGTTTAA‑CACC‑GGATTGCCCATCCAGAATGCCAGCGCACCGCCCATCGACACCTGTTGGCGACGCATTCCCGCCGCGACCGGAGCCGCACAGCAGGTACACATCATGCCCGGCAACGAAAACAGCGTTCCCAGCAGCGTGCCGCGAAAGCGCGATTGCCCAAGCGTACGCAACAACCAGTCACGCGGGATCAGCACCTGAATCAACGAACCGAGGGTCa > 1:59386/1‑227 (MQ=255) gCCGGGTTTAA‑CACC‑GGATTGCCCATCCAGAATGCCAGCGCACCGCCCATCGACACCTGTTGGCGACGCATTCCCGCCGCGACCGGAGCCGCACAGCAGGTACACATCATGCCCGGCAACGAAAACAGCGTTCCCAGCAGCGTGCCGCGAAAGCGCGATTGCCCAAGCGTACGCAACAACCAGTCACGCGGGATCAGCACCTGaa > 1:1638845/1‑205 (MQ=255) ccGGGTTTAA‑CACC‑GGATTGCCCATCCAGAATGCCAGCGCACCGCCCATCGACACCTGTTGGCGACGCATTCCCGCCGCGACCGGAGCCGCAcag > 1:1581357/1‑95 (MQ=255) ggggTTTAA‑CCCC‑GGATTGCCCATCCAGAATGCCAGCGCCCCGCCCATCGACCCCTGTTGGCGACGCATCCCCGCCGCGACCGGAGCCGCAcagc < 2:1578553/94‑1 (MQ=255) gggTTTAA‑CACC‑GGATTGCCCATCCAGAATGCCAGCGCACCGCCCATCGACACCTGTTGGCGACGCATTCCCGCCGCGACCGGAGCCGCACAGCAGGTACACATCATGCCCGGCAACGCAAACAGCGCTCCCTGCAGCGTGCCGCGAAAGCGCGATTGCCCAAGCGTAAGCCACAACCAGTCACGCGGGATCCGCa > 1:1764686/1‑196 (MQ=255) gTTTAACCACC‑GGTTTGCCAACCCGGAATCCCAGCGCCCCCCCAACCGACCCCTGTGGGCGCCGCATCCCCGCCGCGACCGGAGCCGCACAGCAGGTACACATCATGCCCGGCAACGAAAACAGCGTTCCCAGCAGCGTGCCGCGAAAGCGCGATTGCCCAAGCGTACGCAACAACCAGTCACGCGGGATCAGCAc < 2:1761566/196‑1 (MQ=255) ggATTGCCCATCCAGAATGCCAGCGCACCGCCCATCGACACCTGTTGGCGACGCATTCCCGCCGCGACCGGAGCCGCACAGCAGGTACACATCATGCCCGGCAACGAAAACAGCGTTCCCAGCAGCGTGCCGCGAAAGCGCGATTGCCCAAGCGTACGCAACAACCAg > 1:1110502/1‑168 (MQ=255) gATTGCCCATCCAGAATGCCAGCGCACCGCCCATCGACACCTGTTGGCGACGCATTCCCGCCGCGACCGGAGCCGca > 1:593867/1‑77 (MQ=255) aTTCCCCATCCAGAATGCCAGCGCCCCCCCCATCGCCCCCTGTTGGCGACGCATTCCCGCCGCGACCGGAGCCGcac < 2:592895/77‑1 (MQ=255) tGCCCATCCAGAATGCCAGCGCACCGCCCATCGACACCTGTTGGCGACGCATTCCCGCCGCGACCGGAGCCGCACAGCAGGTACACATCATGCCCGGCAACGAAAACAGCGTTCCCAGCAGCGTGCCGCGAAAGCGCGATTGCCCAAGCGTACGCAACAACCAGTCACGCGGGATCAGCACCTGAATCAACGAACCGAGGATCA‑CCCCAGCACCGCCGCTTTCCATAc > 1:1255462/1‑228 (MQ=255) cccATCCAGAATGCCAGCGCACCGCCCATCGACACCTGTTGGCGACGCATTCCCGCCGCGACCGGAGCCGCACAGCAGGTACACATCATGCCCGGCAACGAAAACAGCGTTCCCAGCAGCGTGCCGCGAAAGCGCGATTGCCCAAGCGTACGCAACAACCAGTCACGCGGGATCAGCACCTGAATCAGCGAACCGAGGATCACCCCCAGCACCGCCCCTTTCCCTAcc > 2:1387666/1‑228 (MQ=255) cccATCCAGAATGCCAGCGCACCGCCCATCGACACCTGTTGGCGACGCATTCCCGCCGCGACCGGAGCCGCACAGCAGGTACACATCATGCCCGGCAACGAAAACAGCGTTCCCAGCAGCGTGCCGCGAAAGCGCGATTGCCCAAGCGTACGCAACAACCAGTCACGCGGGATCAGCACCTGAATCACCGAACCGCGGATCACCCCCAGCACCGCCGCTTTCCATAcc > 1:1029205/1‑228 (MQ=255) cccATCCAGAATGCCAGCGCACCGCCCATCGACACCTGTTGGCGACGCATTCCCGCCGCGACCGGAGCCGCACAGCAGGTACACATCATGCCCGGCAACGAAAACAGCGTTCCCAGCAGCGTGCCGCGAAAGCGCGATTGCCCAAGCGTACGCAACAACCAGTCACGCGGGATCAGCACCTGAATCAACGAACCGCGGATCACCCCCCGCACCGCCGCTTTCCATaac > 2:1231893/1‑226 (MQ=255) | TCCATAGCGCCCTGCCCCAGCGGCTAAAAAACCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCTGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCAGCGTCGCAATCAGCAACACCATCACCAGCCCGGCCACCAGACGAATCGCCGCAAAACCCCAGCCGAGGACAAAGCCCATAAACACCAGCGTCGCCGGGTTTAA‑CACC‑GGATTGCCCATCCAGAATGCCAGCGCACCGCCCATCGACACCTGTTGGCGACGCATTCCCGCCGCGACCGGAGCCGCACAGCAGGTACACATCATGCCCGGCAACGAAAACAGCGTTCCCAGCAGCGTGCCGCGAAAGCGCGATTGCCCAAGCGTACGCAACAACCAGTCACGCGGGATCAGCACCTGAATCAACGAACCGAGGATCACCCCCAGCACCGCCGCTTTCCATACC > NC_000913/3297463‑3297911 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 6 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |