Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_000913 | 353,610 | C→G | 12.5% | A302G (GCG→GGG) | prpE → | propionate‑‑CoA ligase |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 353,610 | 0 | C | G | 12.5% | 227.2 / 2.1 | 85 | A302G (GCG→GGG) | prpE | propionate‑‑CoA ligase |
Reads supporting (aligned to +/- strand): ref base C (30/43); new base G (8/4); total (38/47) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.24e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
GTGGCTGGAATCCAACGAAACCTCCTGCATTCTCTACACTTCCGGCACGACCGGCAAACCTAAAGGCGTGCAGCGTGACGTCGGCGGATATGCGGTGGCGCTGGCGACCTCGATGGACACCATTTTTGGCGGCAAAGCGGGCAGCGTGTTCTTTTGCGCATCGGATATCGGCTGGGTGGTGGGGCATTCGTATATCGTTTACGCGCCGCTGCTGGCGGGGATGGCGACTATCGTTTACGAAGGATTGCCGAC‑CTGGCCGGACTGCGGC‑GTGT‑GGTGGACAATCGTCGAGAAATATCAGGTTAGCCGGATGTTCTCAGCGCCGACCGCCATTCGCGTGCT‑GAAAAAATTCCCTACCG‑CTGAAATTCGCAAACACGATCTCTCGTCGCT‑GGAA‑GTGCTCTATCTGGCTGGAGAACCGCTGGACGAGCCGACCGCCAGTTGGGTGAGCAATACG > NC_000913/353386‑353836 | gtggcTGGAATCCAACGAAACCTCCTGCATTCTCTACACTTCCGGCACGACCGGCAAACCTAAAGGCGTGCAGCGTGACGTCGGCGGATATGCGGTGGCGCTGGCGACCTCGATGGACACCATTTTTGGCGGCAAAGCGGGCAGCGTGTTCTTTTGCGCATCGGATATCGGCTGGGTGGTGGGGCATTCGTATATCGTTTACGCGCCGCTGCTGGCGGGGATGGCGa < 1:1028198/227‑1 (MQ=255) gcTGGAATCCAACGAACCCTCCTGCATTCCTTCCCCTTCCGGCACGACCGGCAAACCTAAAGGCGGGCAGCGTGACGTCGGCGGATATGCGGTGGCGCTGGCGACCTCGATGGACACCATTTTTGGCGGCAAAGCGGGCAGCGTGTTCTTTTGCGCATCGGATATCGGCTGGGTGGTGGGGCATTCGTATATCGTTTACGCGCCGCTGCTGGCGGGGATGGCGACTa < 2:1533885/227‑1 (MQ=255) gAATCCAACGAAACCTCCTGCATTCTCTACACTTCCGGCACGACCGGCAAACCTAAAGGCGTGCAGCGTGACGTCGGCGGATATGCGGTGGCGCTGGCGACCTCGATGGACACCATTTTTGGCGGCAAAGCGGGCAGCGTGTTCTTTTGCGCATCGGATATCGGCTGGGTGGTGGGGCATTCGTATATCGTTTACGCGCCGCTGCTGGCGGGGATGGCGACTa < 2:1824467/223‑1 (MQ=255) aTCCAACGAAACCTCCTGCATTCTCTACACTTCCGGCACGACCGGCAAACCTAAAGGCGTGCAGCGTGACGTCGGCGGATATGCGGTGGCGCTGGCGACCTCGATGGACACCATTTTTGGCGGCAAAGCGGGCAGCGTGTTCTTTTGCGCATCGGATATCGGCTGGGTGGTGGGGCATTCGTATATCGTTTACGCGCCGCTGCTGGCGGGGATGGCGGGTATCGctt > 1:1560899/1‑227 (MQ=255) aaCGAAACCTCCTGCATTCTCTACACTTCCGGCACGACCGGCAAACCTAAAGGCGTGCAGCGTGACGTCGGCGGATATGCGGTGGCGCTGGCGACCTCGATGGACACCATTTTTGGCGGCAAAGCGGGCAGCGTGTTCTTTTGCGCATCGGATATCGGCTGGGTGGTGGGGCATTCGTATATCGTTTACGCGCCGCTGCTGGCGGGGATGGGGACTATCGTTTTCGa > 1:1176809/1‑227 (MQ=255) cctGCATTCTCTACACTTCCGGCACGACCGGCAAACCTAAAGGCGTGCAGCGTGACGTCGGCGGATATGCGGTGGCGCTGGCGACCTCGATGGACACCATTTTTGGCGGCAAAGCGGGCAGCGTGTTCTTTTGCGCATCGGATATCGGCTGGGTGGTGGGGCATTCGTATATCGTTTACGCGCCGCTGCTGGCGGGGGTGGCGGGCATCGGTTACGAACGAGTGTCGa > 1:337926/1‑228 (MQ=255) tGCATTCTCTACACTGCCGGCACGACCGGCAAACCTAACGGCGTGAAGCGTGACGTCGGCGGATATGCGGTGGCGCTGGCGACCTCGATGGACACCATTTTTGGCGGCAAAGCGGGCAGCGTGTTCTTTTGCGCATCGGATATCGGCTGGGTGGTGGGGCATTCGTATATCGTTTACGCGCCGCTGCTGGCGGGGATGGCGACTATCGTTTACGAAGGATTGCCGAc‑c < 2:2028126/228‑1 (MQ=255) ttccacacccTTCCGGGACGACCGGCAAACCTAAAGGCGTGCAGCGTGGCGTCGGCGGATATGCGGTGGCGCTGGCGACCTCGATGGACACCATTTTTGGCGGCAAAGCGGGCAGCGTGTTCTTTTGCGCATCGGATATCGGCTGGGTGGTGGGGCATTCGTATATCGTTTACGCGCCGCTGCTGGCGGGGATGGCGACTATCGTTTACGAAGGATTGCCGAC‑CTgg < 1:849098/218‑1 (MQ=255) ttCTCTACCCTTCCGGCACGACCGGCAAACCTAAAGGCGTGCAGCGTGACGGCGGCGGATATGCGGTGGCGCTGGCGACCTCGATGGACACCATTTTTGGCGGCAAAGCGGGCAGCGTGTTCTTTTGCGCATCGGATATCGGCTGGGTGGTGGGGCATTCGTATATCGTTTACGCGCCGCTGCTGGCGGGGATGGCGACTATCGTTTACGAAGGATTGCCGAC‑CTgg < 1:1418330/227‑1 (MQ=255) tatACATTTCCGGCACGACCGGCCAACCTAAAGGCGTGCTGCGTGACGTCGGCGGATATGCGGTGGCGCTGGCGCCCTCGATGGACACCATTTTTGGCGGCAAAGCGGGCAGCGTGTTCTTTTGCGCATCGGATATCGGCTGGGTGGTGGGGCATTCGTATATCGTTTACGCGCCGCTGCTGGCGGGGATGGCGACTATCGTTTACGAAGGATTGCCGAC‑CTGGcc < 2:1297303/224‑1 (MQ=255) tCCGGGACGGCCGGCCAACCTAAAGGCGTGCAGCGTGACGTCGGCGGATATGCGGTGGCGCTGGCGACCTCGATGGACACCATTTTTGGCGGCAAAGCGGGCAGCGTGTTCTTTTGCGCATCGGATATCGGCTGGGTGGTGGGGCATTCGTATATCGTTTACGCGCCGCTGCTGGCGGGGATGGCGACTATCGTTTACGAAGGATTGCCGAC‑CTGGCCGGACTgcggc < 1:310776/228‑1 (MQ=255) tCCGGCACGAACGGCAAACCTAAAGGCGTGCAGCGTGACGTCGGCGGATATGCGGTGGCGCTGGCGACCTCGATGGACACCATTTTTGGCGGCAAAGCGGGCAGCGTGTTCTTTTGCGCATCGGATATCGGCTGGGTGGTGGGGCATTCGTATATCGTTTACGCGCCGCTGCTGGCGGGGATGGCGACTATCGTTTACGAAGGATTGCCGAC‑CTGGCCGGACTgcggc < 2:1807705/228‑1 (MQ=255) ccGGCACGACCGGCAAACCTAAAGGCGTGCAGCGTGACGTCGGCGGATATGCGGTGGCGCTGGCGACCTCGATGGACACCATTTTTGGCGGCAAAGCGGGCAGCGTGTTCTTTTGCGCATCGGATATCGGCTGGGTGGTGGGGCATTCGTATATCGTTTACGCGCCGCTGCTGGCGGGGATGGGGACTATGGGTTACGAAGGGTTGCCGAC‑CTGGCCGGACTgcgggg > 1:152539/1‑226 (MQ=255) ccGGCACGACCGGCAAACCTAAAGGCGTGCAGCGTGACGTCGGCGGATATGCGGTGGCGCTGGCGACCTCGATGGACACCATTTTTGGCGGCAAAGCGGGCAGCGTGTTCTTTTGCGCATCGGATATCGGCTGGGTGGTGGGGCATTCGGATATCGTTTACGCGCCGCTGCTGGCGGGGGTGGCGGCTCATGTTTTTGAAGGAATGCCGCC‑CTGGGCgggcgtgcgcg > 1:1164217/1‑219 (MQ=255) cGGCACGACCGGCAAACCTAAAGGCGTGCAGCGTGACGTCGGCGGATATGCGGTGGCGCTGGCGACCTCGATGGACACCATTTTTGGCGGCAAAGCGGGCAGCGTGTTCTTTTGCGCATCGGATATCGGCTGGGTGGTGGGGCATTCGTATATCGTTTACGCGCCGCTGCTGGCGGGGAGTGGGACTCTCGTTTACGAAGGATTGCCGACACTGCCCGG‑CTgcggc‑gg > 1:1826922/1‑227 (MQ=255) cGGCACGACCGGCAAACCTAAAGGCGTGCAGCGTGACGTCGGCGGATATGCGGTGGCGCTGGCGACCTCGATGGACACCATTTTTGGCGGCAAAGCGGGCAGCGTGTTCTTTTGCGCATCGGATATCGGCTGGGGGGTGGGGCATTCGGATATCGTTTACGCGCCGCTGCTGGCGGGGGTGGGGACTCTCGGTTACGAAGGATTGCCGAC‑CTGGCCgggagtcgggt > 1:1559638/1‑218 (MQ=255) ggCACGACGGGCAAACCTATAGGCGTTCAGCGTGCCGTCGGCGGATATGCGGTGGCGCTGGCGACCTCGATGGACACCATTTTTGGCGGCAAAGCGGGCAGCGTGTTCTTTTGCGCATCGGATATCGGCTGGGTGGTGGGGCATTCGTATATCGTTTACGCGCCGCTGCTGGCGGGGATGGCGACTATCGTTTACGAAGGATTGCCGAC‑CTGGCCGGACTGCGGC‑gtg < 2:1452807/228‑1 (MQ=255) ggCACGACCGGCAAACCTAAAGGCGTGCAGCGTGACGGCGGCGGATATGCGGTGGCGCTGGCGACCTCGATGGACACCATTTTTGGCGGCAAAGCGGGCAGCGTGTTCTTTTGCGCATCGGATATCGGCTGGGTGGTGGGGCATTCGTATATCGTTTACGCGCCGCTGCTGGCGGGGATGGCGa < 1:1965797/184‑1 (MQ=255) gCACGACCGGCAAACCTAAAGGCGTGCAGCGTGACGTCGGCGGATATGCGGTGGCGCTGGCGACCTCGATGGACACCATTTTTGGCGGCAAAGCGGGCAGCGTGTTCTTTTGCGCATCGGATATCGGCTGGGTGGTGGGGCATTCGTATATCGTTTACGCGCCGCTGCTGGCGGGGATGGGGACGATCGGTTACGAAGGAATTCCGAA‑CTGGCCGGGCTgcggc‑gctg > 1:305344/1‑225 (MQ=255) gCACGACCGGCAAACCTAAAGGCGTGCAGCGTGACGTCGGCGGATATGCGGTGGCGCTGGCGACCTCGATGGACACCATTTTTGGCGGCAAAGCGGGCAGCGTGTTCTTTTGCGCATCGGATATCGGCTGGGTGGTGGGGCATTCGTATATCGTTTACGCGCCGCTGCTGGCGGGGATGGCGACTATCg > 1:1021286/1‑189 (MQ=255) cACGACCGGCAAACCTAAAGGCGTGCAGCGTGACGTCGGCGGATATGCGGTGGCGCTGGCGACCTCGATGGACACCATTTTTGGCGGCAAAGCGGGCAGCGTGTTCTTTTGCGCATCGGATATCGGCTGGGTGGTGGGGCATTCGTATATCGTTTACGCGCCGCTGCTGGCGGGGATGGCGACTATCGt < 2:1019426/189‑1 (MQ=255) aCCGGCAAACCTAAAGGCGTGCAGCGTGACGTCGGCGGATATGCGGTGGCGCTGGCGACCTCGATGGACACCATTTTTGGCGGCAAAGCGGGCAGCGTGTTCTTTTGCGCATCGGATATCGGCTGGGTGGTGGGGCATTCGTATATCGTTTACGCGCCGCTGCTGGCGGGGGTGGCGGCTATCGTTTACGAAGGATTGCCGAC‑CTGGCCCGACTGCGGC‑GTGt‑ggtgg > 1:1561244/1‑228 (MQ=255) cGGCAAACCTAAAGGCGTGCAGCGTGACGTCGGCGGATATGCGGTGGCGCTGGCGACCTCGATGGACACCATTTTTGGCGGCAAAGCGGGCAGCGTGTTCTTTTGCGCATCGGATATCGGCTGGGTGGTGGGGCATTCGTATATCGTTTACGCGCCGCTGCTGGCGGGGATGGCGACTATCGTTTACGAAGGATTGCCGAC‑CTGGCCGGACTGCGGC‑GTgt‑ggt < 1:906157/224‑1 (MQ=255) ccTAAAGGCGTGCAGCGTGACGTCGGCGGATAGGCGGTGGCGCTGGCGCCCTCGATGGACACCATTTTGGGCGGCAAAGCGGGCAGCGTTTTCTTTTGCGCATCGGATATCGGCTGGGTGGTGGGGCATTCGTATATCGTTTACGCGCCGCTGCTGGCGGGGATGGCGACTATCGTTTACGAAGGATTGCCGAC‑CTGGCCGGACTGCGGC‑GTGT‑GGTGGACAAtcgt < 1:1730130/227‑1 (MQ=255) aaGGCGTGCAGCGTGACGTCGGCGGATATGCGGTGGCGCTGGCGACCTCGATGGACACCATTTTTGGCGGCAAAGCGGGCAGCGTGTTCTTTTGCGCATCGGATATCGGCTGGGTGGTGGGGCATTCGTATATCGTTTACGCGCCGCTGCTGGCGGGGATGGCGACTATCGTTTACGAAGGATTGCCGAC‑CTGGCCGGACTGCGGC‑GTGT‑GGTGGACAATCGTCgaga < 2:1048525/228‑1 (MQ=255) aaGGCGTGCAGCGTGACGTCGGCGGATATGCGGTGGCGCTGGCGACCTCGATGGACACCATTTTTGGCGGCAAAGCGGGCAGCGTGTTCTTTTGCGCATCGGATATCGGCTGGGTGGTGGGGCATTCGTATATCGTTTACGCGCCGCTGCTGGCGGGGATGGCGACTATCGTTTACGAAGGATTGCCGAC‑CTGGCCGGACTGCGGC‑GTGT‑GGTGGACAATCGTCgag < 1:1994258/227‑1 (MQ=255) tGCAGCGTGACGTCGGCGGATATGCGGTGGCGCTGGCGACCTCGATGGACACCATTTTTGGCGGCAAAGCGGGCAGCGTGTTCTTTTGCGCATCGGATATCGGCTGGGGGGTGGGGCATTCGGATATCGTTTACGCGCCGCTGCTGGGGGGGGTGGCGGACAACGGTTACGAAGGAATGGCGAC‑CTGGGCGGGGCGCTGC‑GTGTGGGTGGGC‑ATAGTCGAGCAataat > 2:1180844/1‑226 (MQ=255) gCAGCGTGACGTCGGCGGATATGCGGTGGCGCTGGCGACCTCGATGGACACCATTTTTGGCGGCAAAGCGGGCAGCGTGTTCTTTTGCGCATCGGATATCGGCTGGGTGGTGGGGCATTCGTATATCGTTTACGCGCCGCTGCTGGCGGGGATGGCGACTATCGTTTACGAAGGATTGCCGAC‑CTgg < 1:43006/187‑1 (MQ=255) catcGTGACGTCGGCGGATATGCGGTGGCGCTGGCGACCTCGATGGACACCATTTTTGGCGGCAAAGCGGGCAGCGTGTTCTTTTGCGCATCGGATATCGGCTGGGTGGTGGGGCATTCGTATATCGTTTACGCGCCGCTGCTGGCGGGGATGGCGACTATCGTTTACGAAGGATTGCCGAC‑CTGGCCGGACTGCGGC‑GTGT‑GGTGGACAATCGTCGAGAAATATCAg < 2:1185060/225‑1 (MQ=255) gcggATATGCGGTGGCGCTGGCGACCTCGATGGACACCATTTTTGGCGGCAAAGCGGGCAGCGTGTTCTTTTGCGCATCGGATATCGGCTGGGTGGGGGGGCATTCGTATATCGTTTACGCGCCGCTGCTGGCGGGGAGGGCGGCTATCGTTTACGAAAGATTGCCGAC‑CTGGCCGGACTTCGGC‑GTGT‑GGTGGACAATCGTCGCGAAAAATCAGGTTAGCCggcgg > 1:1526978/1‑224 (MQ=255) atGCGGTGGCGCTGGCGACCTCGATGGACACCATTTTTGGCGGCAAAGCGGGCAGCGTGTTCTTTTGCGCATCGGATATCGGCTGGGGGGTGGGGCATTCGTATATCGTTTACGCGCCGCTGCTGGCGGGGATGGGGACTATCGTTTACGAAGGATGTCCGAC‑CTGGCCGGGCTGCGGC‑GTGT‑GGGGGGCGATCGTCGAGAAAAATCAGGGTAGCCggtggtttgac > 2:144183/1‑218 (MQ=255) tGGCGCTGGCGACCTCGATGGACCCCATTTTTGGCGGCAAAGCGGGCAGCGTGTTCTTTTGCGCATCGGATATCGGCTGGGTGGTGGGGCATTCGTATATCGTTTACGCGCCGCTGCTGGCGGGGATGGCGACTATCGTTTACGAAGGATTGCCGAC‑CTGGCCg < 1:716147/164‑1 (MQ=255) ctgtGGACCCCTTTTTTGGCTGCGAAGGGGGCGGCGTGTTCTTTGCCGCATGGGATATCGGCTGGGGGGTGGGTCGTTCGATTAGGGTTGCCGCGCCGCAGCGGGCGGGGAGGGCGACTATCGTTTACGAAGGATTGCCGCC‑ATGGCCGGACTGCGGC‑GTGT‑GGTGGACAATCGTCGAGAAATATCAGGTTAGCCGGATTTTCTCAGCGCCGACCGCCATTCGCGTg < 2:1607553/224‑1 (MQ=255) tgtGGCGGCAAAGCGGGCAGAGTGTTCTTTTGCGCATCGGAGAGCGGCTGGGTGGTGGGGCATTCGTATATCGTTTCCGCGCCGCGGCTGGCGGGGATGGCGACTATCGTTTACGAAGGATTGCCGAC‑CTGGCCGGACTGCGGC‑GTGT‑GGTGGACAATCGTCGAGAAATATCAGGTTAGCCGGATGTTCTCAGCGCCGACCGCCATTCGCGTGCT‑GAAAAAATTccc < 2:304823/225‑1 (MQ=255) ggcggcAAAGCGGGCAGCGTGTTCTTTTGCGCATCGGATATCGGCTGGGTGGTGGGGCATTCGTATATCGTTTACGCGCCGCTGCTGGCGGGGATGGCGACt > 1:1573347/1‑102 (MQ=255) gcggcAAAGCGGGCAGCGTGTTCTTTTGCGCATCGGATATCGGCTGGGTGGTGGGGCATTCGTATATCGTTTACGCGCCGCTGCTGGCGGGGATGGCGACTa < 2:1570556/102‑1 (MQ=255) cggcAAAGCGGGCAGCGTGTTCTTTTGCGCATCGGATATCGGCTGGGTGGTGGGGCATTCGTATATCGTTTACGCGCCGCTGCTGGCGGGGATGGCGACTATCGTTTACGAAGGATTGCCGAC‑CTGGCCGGACTGCGGC‑GTGT‑GGTGGACAAtcgtcg < 1:43660/158‑1 (MQ=255) ggcAAAGCGGGCAGCGTGTTCTTTTGCGCATCGGATATCGGCTGGGTGGTGGGGCATTCGTATATCGTTTACGCGCCGCTGCTGGCGGGGATGGCGACTATCg > 1:338266/1‑103 (MQ=255) ggcAAAGCGGGCAGCGTGTTCTTTTGCGCATCGGATATCGGCTGGGTGGTGGGGCATTCGTATATCGTTTACGCGCCGCTGCTGGCGGGGATGGCGACTATCGTTTAc > 1:35361/1‑108 (MQ=255) gcAAAGCGGGCAGCGTGTTCTTTTGCGCATCGGATATCGGCTGGGTGGTGGGGCATTCGTATATCGTTTACGCGCCGCTGCTGGCGGGGATGGCGACTATCGt < 2:337696/103‑1 (MQ=255) gcAAAGCGGGCAGCGTGTTCTTTTGCGCATCGGATATCGGCTGGGTGGTGGGGCATTCGTATATCGTTTACGCGCCGCTGCTGGCGGGGATGGCGACTATCGTTTACg < 2:35295/108‑1 (MQ=255) ctgCGTGTTCTTTTGCGCATCGGATATCGGCTGGGTGGTGGGGCATTCGTATATCGTTTACGCGCCGCTGCTGGCGGGGATGGCGACTATCGTTTACGAAGGATTGCCGAC‑CTGGCCGGACTGCGGC‑GTGT‑GGTGGACAATCGTCGAGAAATATCAGGTTAGCCGGATGTTCTCAGCGCCGACCGCCATTCGCGTGCT‑GAAAAAATTCCCTACCG‑CTGAAATTCGCa < 1:345749/225‑1 (MQ=255) cTTTTGCGCATCGGATATCGGCTGGGTGGTGGGGCATTCGTATATCGTTTACGCGCCGCTGCTGGCGGGGGTGGCGACTATCGTTTTCGAAGGATTGCCGAC‑CTGGCCGGGCTGCGGC‑GGGT‑GGTGGGCAATCGTCGGGAAATATCAGGTTAGCCCGATGTTTTCAGCGCCGACCCCCCTTACAGTGGTGGAAAAAATTCCTTA‑CG‑CTGAAATTTGCAAAAACGAtac > 2:1991906/1‑226 (MQ=255) tGCGCATCGGATATCGGCTGGGTGGTGGGGCATTCGTATATCGTTTACGCGCCGCTGCTGGCGGGGGGGGCGACTTTCGTTTTCGAAGGATTGCCGAC‑CTGGCCGGACTGCGGC‑GGGT‑GGGGGGCAATCGGCGAGAAATATCAGGGTAGCCGGATGTTTTCAGCGCCGACCGCAATTTGCGGGCT‑GGTAAAATTCCCTACCG‑CTGTAAATCGCCAACACCAtcccccg > 2:1688086/1‑223 (MQ=255) cgcATCGGATATCGGCTGGGGGGTGGGGCATTCGTATATCGTTTACGCGCCGCTGCTGGCGGGGGTGGGGGCTATCGTTTACGAAGGATTGCCGAC‑CTGGCCgg > 2:1427583/1‑104 (MQ=255) gcATCGGGTGTGGGCTGGGTGGTGGGGCGTTCGTATATCGTTTGAGCGGCGCTGCTGGCGGGGATGGCGACTATCGTTTACGAAGGATTGCCGAC‑CTGGCGGGACTGCGGC‑GTGT‑TGTGGACAATCGTCGAGAAATATCAGGTTAGc < 1:991974/147‑1 (MQ=255) gcATCGGATATCGGCTGGGTGGTGGGGCATTCGTATATCGTTTACGCGCCGCTGCTGGCGGGGATGGCGACTATCGTTTACGAAGGATTGCCGAC‑CTGGCCGGa < 1:1430140/104‑1 (MQ=255) cGGATATCGGCTGGGTGGTGGGGCATTCGTATATCGTTTACGCGCCGCTGCTGGCGGGGATGGCGACTATCGTTTACGAAGGATGGCCGAC‑CTGGCCGGACTGCGGC‑GTGT‑GGTGGACAATCGTCGAGAAATATCAGGTTAGCCGGATGTTCTCAGCGCCGACCGCCATTCGCGTGCT‑GAAAAAATTCCCTACCG‑CTGAAATTCGCAAACACGATCTCGCGTCGCT‑gg < 1:938102/228‑1 (MQ=255) gttttCGGCTGGGTGGTGGGCCATTCGTATATCGTTTACGCGCCGCTGCTGGCGGGGATGGCGACTATCGTTTACGAAGGATTGCCGAC‑CTGGCCGGACTGCGGC‑GTGT‑GGTGGACAATCGTCGAGAAATATCAGGTTAGCCGGATGTTCTCAGCGCCGACCGCCATTCGCGTGCT‑GAAAAAATTCCCTACCG‑CTGAAATTCGCAAACACGATCTCTCGTCGCT‑GGaa < 2:1823685/224‑1 (MQ=255) gaattCGGCTGGTTGGTGGGGCATTCGTATATCGGTTCCGCGCCGCTGCTGGCGGGGATGGCGACTATCGTTTACGAAGGATTGCCGAC‑CTGGCCGGACTGCGGC‑GTGT‑GGTGGACAATCGTCGAGAAATATCAGGTTAGCCGGATGTTCTCAGCGCCGACCGCCATTCGCGTGCT‑GAAAAAATTCCCTACCG‑CTGAAATTCGCAAACACGATCTCTCGTCGCT‑GGaa < 1:1318892/224‑1 (MQ=255) atggcgtGGGTGGTGGGGCATGCGTATTTCGTTTCCCCGCCCATGCGGGCGGGGATGGCGACTATCGTTTACGAAGGATTGCCGAC‑CTGGCCGGACTGCGGC‑GTGT‑GGTGGACAATCGTCGAGAAATATCAGGTTAGCCGGATGTTCTCAGCGCCGACCGCCATTCGCGTGCT‑GAAAAAATTCCCTACCG‑CTGAAATTCGCAAACACGATCTCTCGTCGCT‑GGAA‑GTg < 1:1961146/222‑1 (MQ=255) atCGGCTGGGTGGTGGGGCATTCGTATATCGTTTACGCGCCGCTGCTGGCGGGGGGGGGGACTATCGGTTTCGAAGGATTGCCGCC‑CCGGCCGGACTGCGGCGGGGG‑GGGGGACAA‑CGTCGGGGAAAATCAGGGTAGCCCGGGGGTTTAGGGGCCGACCGCCATTGCCGGGCT‑GGAAAAATTCCCAACCC‑CGTGAATTCGCAAAAACGAGTGCTCCTCGCTCGGAA‑gg > 2:1777974/1‑227 (MQ=255) gCTGGGTGGTGGGGCATTCGTATATCGTTTACGCGCCGCTGCTGGCGGGGATGGCGACTATCGTTTACGAAGGATTGCCGAC‑CTGGCCGGACTGCGGC‑GTGT‑GGTGGACAATCGTCGAGAAATATCAGGTTAGCCGGATGTTCTCAGCGCCGACCGCCATTCGCGTGCT‑GAAAAAATTCCCTACCG‑CTGAAATTCGCAAACACGATCTCTCGTCGCT‑GGAA‑GTGctc < 1:384547/227‑1 (MQ=255) tGGGTGGTGGGGCATTCGTATATCGTTTACGCGCCGCTGCTGGCGGGGATGGGGACTATCGTTTACGAAGGATTGCCGAC‑CTGGCCGGACTGCGGC‑GTGT‑GGTGGACAATCGTCGAGAAATATCAGGTTAGCCGGATGTTCTCAGCGCCGACCGCCATTCGCGTGCT‑GAAAAAATTCCCTACCG‑CTGAAATTCGCAAACACGATCTCTCGTCGCT‑GGAA‑GTGCTCTAt < 2:1174702/228‑1 (MQ=255) gggTGGTGGGGCATTCGTATATCGTTTACGCGCCGCTGCTGGCGGGGATGGCGACTATCGTTTTCGAAGGATTGCCGAC‑CTGGCCGGACTGCGGC‑GTGT‑GGTGGACAATCGTCGAGAAATATCAGGTTAGCCGGATGTTCTCAGCGCCGACCGCCCTTTGCGTGCT‑GAAAAAATTCCCTACCT‑CTGAAAATCGCCAACACGATCTCTCGTCTCT‑GGAA‑GAGCTCTAt > 2:199090/1‑227 (MQ=255) ggtggtGGGGCATTCGTATATCGTTTACGCGCCGCTGCTGGCGGGGATGGCGACTATCGTTTACGAAGGATTGCCGAC‑CTGGCCGGACTGCGGC‑gt > 1:394365/1‑96 (MQ=255) gggggtggGGCATTCGTATATCGTTTACGCGCCGCTGCTGGCGGGGATGGCGACTATCGTTTACGAAGGATTGCCGAC‑CCGGCCGGGCTGCGGC‑GGGG‑GGGGGGCAAACGGCGGGGAAAATCAGGGTTGGCGGGTGGTTTCCGGCCCGGCCCCCCATCCCGTGCT‑GGAAAAAATCTCTACCGCCGGAAATTCCCACACCGCAACCCTCGGCCCT‑GGAA‑GGGCCCTac > 2:1961212/4‑226 (MQ=255) gtggtgGGGCATTCGTATATCGTTTACGCGCCGCTGCTGGCGGGGATGGCGACTATCGTTTACGAAGGATTGCCGAC‑CTGGCCGGACTGCGGC‑gtg < 2:393716/96‑1 (MQ=255) gCATTCGTAGATCGTTTACGCGCCGCTGCTGGCGGGGATGGCGACTATCGTTTACGAAGGATTGCCGAC‑CTGGCCGGACTGCGGC‑GTGT‑GGTGGACAATCGTCGAGAAATATCAGGTTAGCCGGATGTTCTCAGCGCCGACCGCCATTCGCGTGCT‑GAAAAAATTCCCTACCG‑CTGAAATTCGCAAACACGATCTCTCGTCGCT‑GGAA‑GTGCTCTATCTGGCTGgag < 1:1995455/227‑1 (MQ=255) cATTCGTATATCGTTTACGCGCCGCTGCTGGCGGGGATGGCGACTATCGTTTACGAAGGATTGCCGAC‑CTGGCCGGACTGCGGC‑GTGT‑GGTGGACAATCGTCGAGAAATATCAGGTTAGCCGGATGTTCTCAGCGCCGACCGCCCTTTCCGTGCT‑GAAAAAATTACCTACCG‑CTGAAATTCGCAAACACGAACTCTCGTCGCT‑GGac > 2:992278/1‑206 (MQ=255) cATTCGTATATCGTTTACGCGCCGCTGCTGGCGGGGATGGCGACTATCGTTTACGAAGGATTGCCGAC‑CTGGCCGGACTGCGGC‑GTGT‑GGTGGACAATCGTCGAGAAATATCAGGTTAGCCGGATGTTCTCAGCGCCGACCGCCATTCGCGTGCT‑GAAAAAATTCCCTACCG‑CTGAAATTCGc > 1:38430/1‑183 (MQ=255) aTTCGTATATCGTTTACGCGCCGCTGCTGGCGGGGATGGCGACTATCGTTTACGAAGGATTGCCGAC‑CTGGCCGGACTGCGGC‑GTGT‑GGTGGACAATCGTCGAGAAATATCAGGTTAGCCGGATGTTCTCAGCGCCGACCGCCATTCGCGTGCT‑GAAAAAATTCCCTACCG‑CTGAAATTCGCa < 2:38360/183‑1 (MQ=255) aTTCGTATATCGTTTACGCGCCGCTGCTGGCGGGGATGGCGACTATCGTTGACGAAGGATTGCCGAC‑CTGGCCGGACTGCGGC‑GTGT‑GGTGGACAATCGTCGAGAAATATCAGGTTAGCCGGATGTTCTCAGCGCCGACCGCCATTCGCGTGCT‑GAAAAAATTCCCTACCG‑CTGAAATTCGCAAACACGATCTCTCGTCGCT‑GGaa < 1:994066/206‑1 (MQ=255) ttCGTATATCGTTTACGCGCCGCTGCTGGCGGGGGTGGCGACTATCGTTTACGAAGGATTGCCGAC‑CTGGCCGGACTGCGGC‑GTGT‑GGTGGACAATCGTCGAGAAATATCAGGTTAGCCGGATGTTCTCAGCGCCGACCGCCATTCGCGTGCT‑GAAAAAATTTCCTACCG‑CTGAAATTACCGAACACGAGCTTCCGTCGCT‑GGAA‑GTGgtcccgctccttc > 2:2017899/1‑211 (MQ=255) ttCGTATATCGTTTACGCGCCGCTGCTGGCGGGGATGGCGGCTATCGTTTACGAAGGATTGCCGAC‑CCGGCCGGGCGTCGGC‑GGGG‑GGTGGACAATCGTCGAGAAATATCAGGTTAGCCGGGTGTTCTCAGCGCCGACCGCCATTCGCGGGCT‑GAAAAAATTTCCTACCG‑CTGAAATTCGCAAACACGAACTCTCGTCGCT‑GGGA‑CTGATCTATc > 2:449122/1‑215 (MQ=255) tcgttgatCTTTTACGGGCCGCTGCTGGCGGGGATGGGGACTATCGTTTACGAAGGATTGCCGAC‑CTGGCCGGACTGCGGC‑GTGT‑GGTGGACAATCGTCAAGAAATATCAGGTTAGCCGGATGTTCTCAGCGCCGACCGCCATTCGCGTGCT‑GAAAAAATTCCCTACCG‑CTGAAATTCGCAAACACGATCTCTCGTCGCT‑GGAA‑GTGCTCTATct < 1:449857/209‑1 (MQ=255) tCGTATATCGGTTACGCGCCGCTGCTGGCGGGGATGGCGACTATCGTTTACGAAGGATTGCCGAC‑CTGGCCGGACTGCGGC‑GTGT‑GGTGGACAATCGTCGAGAAATATCAGGTTAGCCGGATGTTCTCAGCGCCGACCGCCATTCGCGTGCT‑GAAAAAATTCCCTACCG‑CTGAAATTCGCAAACACGATCTCTCGTCGc < 1:2021508/199‑1 (MQ=255) tCGTTTACGCGCCGCTGCTGGCGGGGATGGCGACTATCGTTTACGAAGGATTGCCGAC‑CTGGCCGGACTGCGGC‑GTGT‑GGTGGACAATCGTCGAGAAATATCAGGTTAGCCGGATGTTCTCAGCGCCGACCGCCATTCGCGTGCT‑GAAAAAATTCCCTACCG‑CCGAAATTCGCAAACACGAACTCTCGTAGCT‑GGAA‑GTGCTCCATCTGGCCGGGGaaagcctggagt > 2:2025790/1‑218 (MQ=255) tttACGCGCCGCTGCTGGCGGGGATGGCGACTATCGTTTACGAAGGATTGCCGAC‑CTGGCCGGACTGCGGC‑GTGT‑GGTGGACAATCGTCGAGAAATATCAGGTTAGCCGGa > 1:429469/1‑111 (MQ=255) tttACGCGCCGCTGCTGGCGGGGATGGCGACTATCGTTTACGAAGGATTGCCGAC‑CTGGCCGGACTGCGGC‑GTGG‑GGTGGACAATCGTCGAGAAATATCAGGTTAGCCGGATGTTCTCAGCGCCGACCGCCATTCGCGTGCT‑GAAAAAATTCCCTACCG‑CTGAAATTCGCAAACACGACCTCTCGTCGCT‑GGAA‑GGGCTCTATCCGGCCGGTGAAACGCTGGACGAgg > 2:864054/1‑227 (MQ=255) tttACGCGCCGCTGCTGGCGGGGATGGCGACTATCGTTTACGAAGGATTGCCGAC‑CTGGCCGGACTGCGGC‑GGGT‑GGGGGGCAATCGTCGAGAAATATCAGGTTAGCCGGATGTTCTCAGCGCCGACCGCCATTCGCGTGCT‑GAAAAAATTCCCTACCG‑CTGAAATTTGCCAAAACGAACTTCTGTCCCT‑GGCA‑GTGCTCTATCTGGCTGGAGGACCGCTGGACGAGc > 2:1354928/1‑228 (MQ=255) tttACGCGCCGCTGCTGGCGGGGATGGCGACTATCGTTTACGAAGGATTGCCGAC‑CCGGCCGGGCTGCGGC‑GTGT‑GGGGGACAATCGTCGAGAAATATCAGGTTAGCCGGGTGGTCTCAGCGCCGACCGCCATTCGCGTGCT‑GAAAAAATTTCCTACCG‑CTGAAATTCGCAAACACGATCTCTCGTCCCT‑GGAA‑AGGCCCTAACTGGCTGGGGAACCGCTGGACGAGc > 2:713135/1‑228 (MQ=255) tttACGCGCCGCTGCTGGCGGGGATGGCGACCATCGTTTACGAAGGATTGCCGAC‑CTGGCCGGACTggggc‑gg > 2:1455317/1‑72 (MQ=255) ttACGCGCCGCTGCTGGCGGGGATGGCGACTATCGTTTACGAAGGATTGCCGAC‑CTGGCCGGACTGCGGC‑gtg < 1:1457921/73‑1 (MQ=255) ttACGCGCCGCTGCTGGCGGGGATGGCGACTATCGTTTACGAAGGATTGCCGAC‑CTGGCCGGACTGCGGC‑GTGT‑GGTGGACAATCGTCGAGAAATATCAGGTTAGCCGGAt < 2:428753/111‑1 (MQ=255) tACGCGCCGCTGCTGGCGGGGATGGCGACTATCGTTTACGAAGGATTTCCGAC‑CTGGCCGGACTGCGGC‑GGGT‑GGTGGACAATCGTCGAGAAATATCAGGTTAGCCGGATGTTCTCAGCGCCGACCGCCATTCGCGTGCT‑GAAAAAATTCCCTACCG‑CCGTAATTCGCAAAAACGATCTCTCGGCGCT‑GGAA‑GGGGTCCATCTGGCTTGGGAACCCCTGGACGAGcca > 2:1357587/1‑227 (MQ=255) tACGCGCCGCTGCTGGCGGGGATGGCGACTATCGTTTACGAAGGATTGCCGAC‑CTGGCCGGACTGCGGC‑GTGT‑GGTGGACAATCGTCGAGAAATATCAGGTTAGCCGGATGTTCTCAGCGCCGACCGCCCTTTGCGTGCT‑GAAAAAATTTCCTACCG‑CTGAAATTTGCAAAAACGATCTCCCCTCGCT‑TGAAGGTGC‑CTATCTTGCTGGGGGACCTCCGGGCGatgcc > 2:1136793/1‑224 (MQ=255) gctgctGGCGGGGATGGCGACTATCGTTTACGAAGGATTGCCGAC‑CTGGCCGGACTGCGGC‑GTGT‑GGTGGACAATCGTCGAGAAATATCAGGTTAGCCGGATGTTCTCAGCGCCGACCGCCATTCGCGTGCT‑GAAAAAATTCCCTACCG‑CTGAAATTCGCAAACACGATCTCTCGTCGCT‑GGAA‑GTGc > 1:58737/1‑188 (MQ=255) gctgctGGCGGGGATGGCGACTATCGTTTACGAAGGATTGCCGAC‑CTGGCCGGACTGCGGC‑GTGG‑GGGGGACAATCGTCGAGAAATATCAGGTTAGCCGGATGTTCTCAGCGCCGCCCGCCATTCCCGTGCT‑GAAAAAATTCCCTACCG‑CTGCAATTTGCCAACACGAACTCCCGGCGCC‑GGAA‑GTGGCCTATCTTGCTGGGGACACGCCGGCAGAGCGGAGCGcccg > 2:1425311/1‑226 (MQ=255) ctgcggGGGGGAATGGCGCTTTTCGTTTACGAAGGATTCCCGCC‑CTGGCCGGACTGCGGC‑GTGT‑GGTGGACAATCGTCGAGAAATATCAGGTTAGCCGGATGTTCTCAGCGCCGACCGCCATTCGCGTGCT‑GAAAAAATTCCCTACCG‑CTGAAATTCGCAAACACGATCTCTCGTCGCT‑GGAA‑GTGct < 2:58631/188‑1 (MQ=255) cgggggggaATGGCGGCTATCGTTTACGAAGGATTCCCGAC‑CTGGCCGGACTGGGGC‑GTGT‑GGTGGACAATCGGCGAGAAATATCAGGTTAGCCGGATGTTCTCAGCGCCGACCGCCATTCGCGTGCT‑GAAAAAATTCCCTACCG‑CTGAAATTCGCAAACACGATCTCTCGTCGCT‑GGAA‑GTGCTCTATCTGGCTGGAGAACCGCTGGACGAGCCGACCGCCAGTTgg < 1:1360030/223‑1 (MQ=255) gggggggATGGGGACTATAGTATACGGAGGTGTGCCGCC‑CTGGCCGGACTGCGGG‑GTGT‑GGTGGACAATCGTCGAAAAATATGAGGTTAGCCGGATTTTCCCAGCGCCGACCGCCATTCGCGTGCT‑GAAAAAATTCCCTACCG‑CTGAAATTCGCAAACACGATCTCTCGCCGCT‑GGAA‑GTGCTCTATCTGGCTGGAGAACCGCTGGACGAGCCGACCGCCAGTTGGGt < 2:337357/225‑1 (MQ=255) ggggATGGCGACTATCGTTTACGAAGGATTGCCGAC‑CTGGCCGGACTGCGGC‑GTGG‑GGGGGACAATCGTCGAGAAATATCAGGTTAGCCGGATGTTCTCAgcgc > 2:1890471/1‑104 (MQ=255) gggATGGGGACTTTCGTTTACGAAAGATTGCCGAC‑CTGGCCGGCCTGGGGC‑GTTT‑GGTGGACAATCGTCGAGAAATATCAGTTTAGCCGGTTGTTCTCAGCGcc < 1:1893819/104‑1 (MQ=255) gaaTGGCGACTACCGTTTACGAAGGATGGCCGAC‑CTGGCCGGACTGCGGC‑GTGT‑GGTGGACAATCGTCGAGAAATATCAGGTTAGCCGGATGTTCTCAGCGCCGACCGCCATTCGCGTGCT‑GAAAAAATTCCCTACCG‑CTGAAATTCGCAAACACGATCTCTCGTCGCT‑GGAA‑GTGCTCTATCTGGCTGGAGAACCGCTGGACGAGCCGACCGCCAGTTGGGTGAGCa < 1:1357367/226‑1 (MQ=255) cGACTATCGTTTACGAAGGTTTGCCGAC‑CTGGCCGGACGGCGGC‑GTGT‑GGTGGACAATCGGCGAGAAATATCAGGTTAGCCGGATGTTCTCAGCGCCGACCGCCATTCGCGTGCT‑GAAAAAATTCCCTACCG‑CTGAAATTCGCAAACACGATCTCTCGTCGCT‑GGAA‑GTGCTCTATCTGGCTGGAGAACCGCTGGACGAGCCGACCGCCAGTTGGGTGAGCAATACg < 1:509388/227‑1 (MQ=255) cGACTATCGTTTACGAAGGATTGCCGAC‑CTGGCCGGACTGCGGC‑GTGT‑GGTGGACAATCGTCGAGAAATATCAGGTTAGCCGGATGTTCTCAGCGCCGACCGCCATTCGCGTGCT‑GAAAAAATTCCCTACCG‑CTGAAATTCGCAAACACGATCTCTCGTCGCT‑GGa > 2:46245/1‑166 (MQ=255) | GTGGCTGGAATCCAACGAAACCTCCTGCATTCTCTACACTTCCGGCACGACCGGCAAACCTAAAGGCGTGCAGCGTGACGTCGGCGGATATGCGGTGGCGCTGGCGACCTCGATGGACACCATTTTTGGCGGCAAAGCGGGCAGCGTGTTCTTTTGCGCATCGGATATCGGCTGGGTGGTGGGGCATTCGTATATCGTTTACGCGCCGCTGCTGGCGGGGATGGCGACTATCGTTTACGAAGGATTGCCGAC‑CTGGCCGGACTGCGGC‑GTGT‑GGTGGACAATCGTCGAGAAATATCAGGTTAGCCGGATGTTCTCAGCGCCGACCGCCATTCGCGTGCT‑GAAAAAATTCCCTACCG‑CTGAAATTCGCAAACACGATCTCTCGTCGCT‑GGAA‑GTGCTCTATCTGGCTGGAGAACCGCTGGACGAGCCGACCGCCAGTTGGGTGAGCAATACG > NC_000913/353386‑353836 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 6 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |