New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | 729363 = | 182 (1.040) | 19 (0.130) | 15/172 | 17.7 | 10.9% | intergenic (+23/‑220) | ybfA/rhsC | DUF2517 family protein/Rhs protein with putative toxin domain; putative neighboring cell growth inhibitor |
? | NC_000913 | 729393 = | 153 (1.010) | intergenic (+53/‑190) | ybfA/rhsC | DUF2517 family protein/Rhs protein with putative toxin domain; putative neighboring cell growth inhibitor | |||||
Rejected: Coverage evenness skew score above cutoff. | |||||||||||
Rejected: Frequency below/above cutoff threshold. |
ATATTTATATATATTTCATGAATATATGTTTCGATTGGTATAACGATGTCTAAATATTCCTCTGAACATCTTCCTGATACAAAAAACCGCCAGCGTTTCCGCTGGCGGTTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/729474‑729363 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgctggcggttttTTGTATCAGGAAGATGTTCAGAGGAATATTTAGACATCGTTATACCAATCGAAACATATATTCATGAAATATATATAAATATTTTCCTAATTGTTCTTA > NC_000913/729393‑729491 ATATTTATATATATTTCATGAATATATGTTTCGATTGGTATAACGATGTCTAAATATTCCTCTGAACATCTTCCTGATACAAAAAACCGCCAGCGTTTCC < 2:1529443/100‑1 ATTTATATATATTTCATGAATATATGTTTCGATTGGTATAACGATGTCTAAATATTCCTCTGAACATCTTCCTGATACAAAAAACCGCCAGCGTTTCCGC > 1:3641027/1‑100 TTTATATATATTTCATGAATATATGTTTCGATTGGTATAACGATGTCTAAATATTCCTCTGAACATCTTCCTGATACAAAAAACCGCCAGCGTTTCCGCT > 1:1291961/1‑100 TTTATATATATTTCATGAATATATGTTTCGATTGGTATAACGATGTCTAAATATTCCTCTGAACATCTTCCTGATACAAAAAACCGCCAGCGTTTCCGCT > 1:4023602/1‑100 TATATATATTTCATGAATATATGTTTCGATTGGTATAACGATGTCTAAATATTCCTCTGAACATCTTCCTGATACAAAAAACCGCCAGCGTTTCCGCTGG > 2:3177975/1‑100 TATATATATTTCATGAATATATGTTTCGATTGGTATAACGATGTCTAAATATTCCTCTGAACATCTTCCTGATACAAAAAACCGCCAGCGTTTCCGCTGG < 1:2652623/100‑1 ATATATATTTCATGAATATATGTTTCGATTGGTATAACGATGTCTAAATATTCCTCTGAACATCTTCCTGATACAAAAAACCGCCAGCGTTTCCGCTGGC < 2:1045631/100‑1 ATATATATTTCATGAATATATGTTTCGATTGGTATAACGATGTCTAAATATTCCTCTGAACATCTTCCTGATACAAAAAACCGCCAGCGTTTCCGCTGGC < 1:2147539/100‑1 ATAGATATTTCATGAATATATGTTTCGATTGGTATGACGATGTCTAAATATTCCTCTGAACATCAACCTAAAACAAAAAACCGCCAGCGTTTCCGCTGGC < 2:3648272/100‑1 atgTATTTCATGAATATATGTTTCGCTTGGTATAACTATGTCTAAATATTCCTCTGAACATCTTCCTGATACAAAAAACCGCCAGCGTTTCCGCTGGCGG < 1:1215923/97‑1 ATATATTTCATGAATATATGTTTCGATTGGTATAACGATGTCTAAATATTCCTCTGAACATCTTCCTGATACAAAAAACCGCCAGCGTTTCCGCTGGCGG < 2:3880520/100‑1 TATATTTCATGAATATATGTTTCGATTGGTATAACGATGTCTAAATATTCCTCTGAACATCTTCCTGATACAAAAAACCGCCAGCGTTTCCGCTGGCGGT > 1:22499/1‑100 ATATTTCATGAATATATGTTTCGATTGGTATAACGATGTCTAAATATTCCTCTGAACATCTTCCTGATACAAAAAACCGCCAGCGTTTCCGCTGGCGGTT < 1:784899/100‑1 ATATTTCATGAATATATGTTTCGATTGGTATAACGATGTCTAAATATTCCTCTGAACATCTTCCTGATACAAAAAACCGCCAGCGTTTCCGCTGGCGGTT < 1:458402/100‑1 TATTTCATGAATATATGTTTCGATTGGTATAACGATGTCTAAATATTCCTCTGAACATCTTCCTGATACAAAAAACCGCCAGCGTTTCCGCTGGCGGTTT > 1:1412515/1‑100 TATTTCATGAATATATGTTTCGATTGGTATAACGATGTCTAAATATTCCTCTGAACATCTTCCTGATACAAAAAACCGCCAGCGTTTCCGCTGGCGGTTT > 2:1412446/1‑100 TATTTCATGAATATATGTTTCGATTGGTATAACGATGTCTAAATATTCCTCTGAACATCTTCCTGATACAAAAAACCGCCAGCGTTTCCGCTGGCGGTTT > 2:1428497/1‑100 ATTTCATGAATATATGTTTCGATTGGTATAACGATGTCTAAATATTCCTCTGAACATCTTCCTGATACAAAAAACCGCCAGCGTTTCCGCTGGCGGTTTT > 2:1426024/1‑100 TATGTTTCGATTGGTATAACGATGTCTAAATATTCCTCTGAACATCTTCCTGATACAAAAAACCGCCAGCGTTTCCGCTGGCGGTTTTTTGTATCAGGAA > 1:2622628/1‑100 GATTGGTATAACGATGTCTAAATATTCCTCTGAACATCTTCCTGATACAAAAAACCGCCAGCGTTTCCGCTGGCGGTTTTTTGTATCAGGAAGATGTTCA > 1:3778594/1‑100 gtTATAACGATGTCTAAATATTCCTCTGAACATGTTCCTGATAGAAAAAACCGCCAGCGTTTCCGCTGGCGCGTTTTTGTGTCAGAAAGAGGTTCAGAGt > 2:3690530/3‑99 GGTATAACGATGTCTAAATATTCCTCTGAACATCTTCCTGATACAAAAAACCGCCAGCGTTTCCGCTGGCGGTTTTTTGTATCAGGAAGATGTTCAGAGG > 1:800154/1‑100 ATGTCTAAATATTCCTCTGAACATCTTCCTGATACAAAAAACCGCCAGCGTTTCCGCTGGCGGTTTTTTGTATCAGGAAGATGTTCAGAGGAATATTTAG > 1:1939502/1‑100 TGTCTAAATATTCCTCTGAACATCTTCCTGATACAAAAAACCGCCAGCGTTTCCGCTGGCGGTTTTTTGTATCAGGAAGATGTTCAGAGGAATATTTAGA > 1:2206524/1‑100 ACATCTTCCTGATACAAAAAACCGCCAGCGTTTCCGCTGGCGGTTTTTTGTATCAGGAAGATGTTCAGAGGAATATTTAGACATCGTTATACCAATCGAA > 1:2449461/1‑100 CTTCCTGATACAAAAAACCGCCAGCGTTTCCGCTGGCGGTTTTTTGTATCAGGAAGATGTTCAGAGGAATATTTAGACATCGTTATACCAATCGAAACAT > 1:1119696/1‑100 CCTGATACAAAAAACCGCCAGCGTTTCCGCTGGCGGTTTTTTGTATCAGGAAGATGTTCAGAGGAATATTTAGACATCGTTATACCAATCGAAACATATA < 2:1098574/100‑1 TGATACAAAAAACCGCCAGCGTTTCCGCTGGCGGTTTTTTGTATCAGGAAGATGTTCAGAGGAATATTTAGACATCGTTATACCAATCGAAACATATATT > 2:1670749/1‑100 GATACAAAAAACCGCCAGCGTTTCCGCTGGCGGTTTTTTGTATCAGGAAGATGGTCAGACGAATATTTAGACATCGTTATACCAATCGAAACATATATTC > 2:1083006/1‑100 ACAAAAAACCGCCAGCGTTTCCGCTGGCGGTTTTTTGTATCAGGAAGATGTTCAGAGGAATATTTAGACATCGTTATACCAATCGAAACATATATTCATG > 1:2554241/1‑100 CAAAAAACCGCCAGCGTTTCCGCTGGCGGTTTTTTGTATCAGGAAGATGTTCAGAGGAATATTTAGACATCGTTATACCAATCGAAACATATATTCATGA > 2:1654065/1‑100 CAAAAAACCGCCAGCGTTTCCGCTGGCGGTTTTTTGTATCAGGAAGATGTTCAGAGGAATATTTAGACATCGTTATACCAATCGAAACATATATTAATGA > 2:890100/1‑100 AAAACCGCCAGCGTTTCCGCTGGCGGTTTTTTGTATCAGGAAGATGTTCAGAGGAATATTTAGACATCGTTATACCAATCGAAACATATATTCATGAAAT > 2:2296330/1‑100 ACCGCCAGCGTTTCCGCTGGCGGTTTTTTGTATCAGGAAGATGTTCAGAGGAATATTTAGACATCGTTATACCAATCGAAACATATATTCATGAAATATA > 1:3412177/1‑100 CCGCCAGCGTTTCCGCTGGCGGTTTTTTGTATCAGGAAGATGTTCAGAGGAATATTTAGACATCGTTATACCAATCGAAACATATATTCATGAAATATAT > 1:1707994/1‑100 CCGCCAGCGTTTCCGCTGGCGGTTTTTTGTATCAGGAAGATGTTCAGAGGAATATTTAGACATCGTTATACCAATCGAAACATATATTCATGAAATATAT > 2:2369757/1‑100 CCGCCAGCGTTTCCGCTGGCGGTTTTTTGTATCAGGAAGATGTTCAGAGGAATATTTAGACATCGTTATACCAATCGAAACATATATTCATGAAATATAT > 2:1734849/1‑100 CGCTGGCGGTTTTTTGTATCAGGAAGATGTTCAGAGGAATATTTAGACATCGTTATACCAATCGAAACATATATTCATGAAATATATATAAATATTTTCC < 1:1252515/100‑1 CGCTGGCGGTTTTTTGTATCAGGAAGATGTTCAGAGGAATATTTAGACATCGTTATACCAATCGAAACATATATTCATGAAATATATATAAATATTTTCC < 1:660752/100‑1 CGCTGGCGGTTTTTTGTATCAGGAAGATGTTCAGAGGAATATTTAGACATCGTTATACCAATCGAAACATATATTCATGAAATATATATAAATATTTTCC < 2:2265693/100‑1 CGCTGGCGGTTTTTTGTATCAGGAAGATGTTCAGAGGAATATTTAGACATCGTTATACCAATCGAAACATATATTCATGAAATATATATAAATATTTTCC > 2:2079105/1‑100 CTGGCGGTTTTTTGTATCAGGAAGATGTTCAGAGGAATATTTAGACATCGTTATACCAATCGAAACATATATTCATGAAATATATATAAATATTTTCCTA < 1:483178/100‑1 TGGCGGTTTTTTGTATCAGGAAGATGTTCAGAGGAATATTTAGACATCGTTATACCAATCGAAACATATATTCATGAAATATATATAAATATTTTCCTAA < 2:825196/100‑1 nGCGGTTTTTTGTATCAGGAAGATGTTCAGAGGAATATTTAGACATCGTTATACCAATCGAAACATATATTCATGAAATATATATAAATATTTTCCTAAT > 1:583474/2‑100 GGCGGTTTTTTGTATCAGGAAGATGTTCAGAGGAATATTTAGACATCGTTATACCAATCGAAACATATATTCATGAAATATATATAAATATTTTCCTAAT > 1:2548819/1‑100 ctGTTTTTTGTATCAGGAAGATGTTCAGAGGAATATTTAGACATCGTTATACCAATCGAAACATATATTCATGAAATATATATAAATATTTTCCTAATTG < 2:2857077/98‑1 CGGTTTTTTGTATCAGGAAGATGTTCAGAGGAATATTTAGACATCGTTATACCAATCGAAACATATATTCATGAAATATATATAAATATTTTCCTAATTG < 2:1092273/100‑1 CGGTTTTTTGTATCAGGAAGATGTTCAGAGGAATATTTAGACATCGTTATACCAATCGAAACACATATTCATGAAATATATATAAATATTTTCCTAATTG > 1:4153909/1‑100 CGGTTTTTTCAATCACAAAGATGTTCAGAGGAATATTTAGACATCGTTATACCAATCGAAACATACATCCATCAAATATATATAAATATTTTCCTAATTG < 2:2856943/100‑1 GGTTTTTTGTATCAGGAAGATGTTCAGAGGAATATTTAGACATCGTTATACCAATCGAAACATATATTCATGAAATATATATAAATATTTTCCTAATTGT < 1:3984353/100‑1 GTTTTTTGTATCAGGAAGATGTTCAGAGGAATATTTAGACATCGTTATACCAATCGAAACATATATTCATGAAATATATATAAATATTTTCCTAATTGTT > 1:1430368/1‑100 taTTTTGTATCAGGAAGATGTTCAGAGGAATATTTAGACATCTTTATACAAATCGAAACATATATTCATGAAATATATATAAATATTTTCCTAATTGTTC < 2:1083718/98‑1 TTTTTGTATCAGGAAGATGTTCAGAGGAATATTTAGACATCGTTATACCAATCGAAACATATATTCATGAAATATATATAAATATTTTCCTAATTGTTCT > 1:3981453/1‑100 TTTTTGTATCAGGAAGATGTTCAGAGGAATATTTAGACATCGTTATACCAATCGAAACATATATTCATGAAATATATATAAATATTTTCCTAATTGTTCT < 2:1429014/100‑1 TTTTTGTATCAGGAAGATGTTCAGAGGAATATTTAGACATCGTTATACCAATCGAAACATATATTCATGAAATATATATAAATATTTTCCTAATTGTTCT < 1:1680002/100‑1 TTTTGTATCAGGAAGATGTTCAGAGGAATATTTAGACATCGTTATACCAATCGAAACATATATTCATGAAATATATATAAATATTTTCCTAATTGTTCTT < 1:1824400/100‑1 TTTTGTATCAGGAAGATGTTCAGAGGAATATTTAGACATCGTTATACCAATCGAAACATATATTCATGAAATATATATAAATATTTTCCTAATTGTTCTT < 1:167587/100‑1 TTTGTATCAGGAAGATGTTCAGAGGAATATTTAGACATCGTTATACCAATCGAAACATATATTCATGAAATATATATAAATATTTTCCTAATTGTTCTTA > 2:253265/1‑100 TTTGTATCAGGAAGATGTTCAGAGGAATATTTAGACATCGTTATACCAATCGAAACATATATTCATGAAATATATATAAATATTTTCCTAATTGTTCTTA > 1:3253655/1‑100 ATATTTATATATATTTCATGAATATATGTTTCGATTGGTATAACGATGTCTAAATATTCCTCTGAACATCTTCCTGATACAAAAAACCGCCAGCGTTTCCGCTGGCGGTTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/729474‑729363 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgctggcggttttTTGTATCAGGAAGATGTTCAGAGGAATATTTAGACATCGTTATACCAATCGAAACATATATTCATGAAATATATATAAATATTTTCCTAATTGTTCTTA > NC_000913/729393‑729491 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |