New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 12994980 (0.000)173 (1.030) 102/190 0.1 100% intergenic (+253/‑1684) ychE/oppA UPF0056 family inner membrane protein/oligopeptide ABC transporter periplasmic binding protein
?NC_000913 1300698 = 0 (0.000)intergenic (+1453/‑484) ychE/oppA UPF0056 family inner membrane protein/oligopeptide ABC transporter periplasmic binding protein

Only 100 of 187 total aligned reads displayed.

AAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGA  >  NC_000913/1300601‑1300797
                                                                                                 |                                                                                                   
atcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaata                                                                                                   <  1:326337‑M2/3‑1 (MQ=255)
 tcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaataa                                                                                                  <  1:3763957‑M2/4‑1 (MQ=255)
  catgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaataat                                                                                                 <  1:1100733‑M2/5‑1 (MQ=255)
    tgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctatataataa                                                                                               <  1:2342977‑M2/7‑1 (MQ=255)
    tgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaataataa                                                                                               >  1:355880‑M2/94‑100 (MQ=255)
    tgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaataataa                                                                                               >  1:3072184‑M2/94‑100 (MQ=255)
      ttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATc                                                                                             >  1:4246333‑M2/92‑100 (MQ=255)
      ttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATc                                                                                             <  1:2259664‑M2/9‑1 (MQ=255)
       tattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCa                                                                                            >  2:825666‑M2/91‑100 (MQ=255)
          tttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAAtt                                                                                         <  1:3053746‑M2/13‑1 (MQ=255)
          tttagccacatcataagcctgggcttgctgaataataatggaaatgatattattaattccactgcctttggtagagcaaagtgctaaATAATAATCAAtt                                                                                         <  2:3631199‑M2/13‑1 (MQ=255)
           ttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTg                                                                                        >  1:4230809‑M2/87‑100 (MQ=255)
                 acatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAat                                                                                  <  1:2945824‑M2/20‑1 (MQ=255)
                   atcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAatta                                                                                >  1:270033‑M2/79‑100 (MQ=255)
                     cataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAattatt                                                                              >  2:4314028‑M2/77‑100 (MQ=255)
                      ataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATtg                                                                             >  2:602313‑M2/76‑100 (MQ=255)
                       taatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATtgt                                                                            >  2:2627597‑M2/75‑100 (MQ=255)
                       taatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATtgt                                                                            >  2:17592‑M2/75‑100 (MQ=255)
                           cctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCAt                                                                        >  1:2915568‑M2/71‑100 (MQ=255)
                            ctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCAtt                                                                       <  1:1337069‑M2/31‑1 (MQ=255)
                            ctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCAtt                                                                       <  1:645240‑M2/31‑1 (MQ=255)
                             tggtcttacggaagaataattgaaatgatattattaattccactgcatttggtaaaggaaagtgctaaATAATAATCAATCTTTAAATTATTGTGAAttt                                                                      >  2:2564130‑M2/69‑100 (MQ=255)
                              gggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTc                                                                     <  2:1994706‑M2/33‑1 (MQ=255)
                               ggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCa                                                                    >  2:1831837‑M2/67‑100 (MQ=255)
                                gcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCac                                                                   <  2:3534537‑M2/35‑1 (MQ=255)
                                gcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCac                                                                   <  1:3046628‑M2/35‑1 (MQ=255)
                                gcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCac                                                                   <  1:2084503‑M2/35‑1 (MQ=255)
                                   tgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTcactan                                                                <  1:3511148‑M2/38‑2 (MQ=255)
                                   tgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCactac                                                                >  2:553001‑M2/63‑100 (MQ=255)
                                    gctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCactact                                                               <  1:1083117‑M2/39‑1 (MQ=255)
                                    gctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCactact                                                               <  2:799204‑M2/39‑1 (MQ=255)
                                    gctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCactact                                                               <  1:4146330‑M2/39‑1 (MQ=255)
                                     ctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTg                                                              <  2:3888933‑M2/40‑1 (MQ=255)
                                       gaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGa                                                            <  1:4275223‑M2/42‑1 (MQ=255)
                                       gaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGa                                                            >  1:391922‑M2/59‑100 (MQ=255)
                                         agaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAAc                                                          <  2:2937895‑M2/44‑1 (MQ=255)
                                          gaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACt                                                         <  1:3180359‑M2/45‑1 (MQ=255)
                                           aataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTg                                                        <  2:1331520‑M2/46‑1 (MQ=255)
                                           aataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTg                                                        >  2:1481102‑M2/55‑100 (MQ=255)
                                           aataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTg                                                        <  1:1181031‑M2/46‑1 (MQ=255)
                                            ataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGt                                                       <  1:956154‑M2/47‑1 (MQ=255)
                                             taattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTa                                                      <  2:1718072‑M2/48‑1 (MQ=255)
                                                ttgaaatgatattattaattccactgcctttggtagaggaaagtgctgaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATc                                                   <  2:3851206‑M2/51‑1 (MQ=255)
                                                 tgaaatgatattattaattccactgcctttgttagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCa                                                  <  1:1534971‑M2/52‑1 (MQ=255)
                                                  gaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAg                                                 <  1:2744705‑M2/53‑1 (MQ=255)
                                                     atgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGaaa                                              <  1:3469247‑M2/56‑1 (MQ=255)
                                                      tgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGaaaa                                             <  2:2364209‑M2/57‑1 (MQ=255)
                                                      tgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGaaaa                                             <  1:3279180‑M2/57‑1 (MQ=255)
                                                       gatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAg                                            <  1:4397771‑M2/58‑1 (MQ=255)
                                                       gatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAg                                            >  2:2834520‑M2/43‑100 (MQ=255)
                                                       gatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAg                                            >  1:3643902‑M2/43‑100 (MQ=255)
                                                        atattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGa                                           >  2:1544773‑M2/42‑100 (MQ=255)
                                                         tattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGAt                                          <  1:2860810‑M2/60‑1 (MQ=255)
                                                          attattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATa                                         >  2:2963024‑M2/40‑100 (MQ=255)
                                                          attattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATa                                         >  2:172470‑M2/40‑100 (MQ=255)
                                                          attattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATa                                         >  1:2540678‑M2/40‑100 (MQ=255)
                                                             attaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGAc                                      <  2:4009033‑M2/64‑1 (MQ=255)
                                                             attaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGAc                                      >  2:4059857‑M2/37‑100 (MQ=255)
                                                              ttaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACa                                     <  1:863933‑M2/65‑1 (MQ=255)
                                                              ttaattccaccgcctttgctagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACa                                     <  1:3576932‑M2/65‑1 (MQ=255)
                                                                  ttccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCt                                 <  1:2630017‑M2/69‑1 (MQ=255)
                                                                    ccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTa                               >  2:2386997‑M2/30‑100 (MQ=255)
                                                                    ccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTa                               <  1:2615376‑M2/71‑1 (MQ=255)
                                                                     cactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATCGACATGCTTAg                              >  2:2939073‑M2/29‑100 (MQ=255)
                                                                     cactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAg                              >  2:533740‑M2/29‑100 (MQ=255)
                                                                     cactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAg                              >  2:432379‑M2/29‑100 (MQ=255)
                                                                     cactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAg                              <  1:2001458‑M2/72‑1 (MQ=255)
                                                                      actgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGc                             <  2:2875015‑M2/73‑1 (MQ=255)
                                                                      actgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGc                             <  1:3002045‑M2/73‑1 (MQ=255)
                                                                         gcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCaa                          >  2:311345‑M2/25‑100 (MQ=255)
                                                                           ctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAAtc                        >  2:3497477‑M2/23‑100 (MQ=255)
                                                                           ctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAAtc                        >  2:3085068‑M2/23‑100 (MQ=255)
                                                                            tttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAAtct                       <  2:1300078‑M2/79‑1 (MQ=255)
                                                                            tttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAAtct                       >  1:1919050‑M2/22‑100 (MQ=255)
                                                                               ggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTa                    >  2:3746550‑M2/19‑100 (MQ=255)
                                                                               ggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTa                    <  2:3282878‑M2/82‑1 (MQ=255)
                                                                               ggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACAGGCTTAGCCAATCCCTa                    >  2:3476458‑M2/19‑100 (MQ=255)
                                                                                  agaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTAttt                 >  1:1392708‑M2/16‑100 (MQ=255)
                                                                                   gaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATttg                >  2:4087293‑M2/15‑100 (MQ=255)
                                                                                   gaggaaagtgctaaACAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATttg                <  2:4136078‑M2/86‑1 (MQ=255)
                                                                                     ggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGGTAGACATGCTTAGCCAATCTCTATttgat              >  2:4249213‑M2/13‑100 (MQ=255)
                                                                                     ggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATttgat              >  1:1896981‑M2/13‑100 (MQ=255)
                                                                                     ggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATttgat              <  2:942379‑M2/88‑1 (MQ=255)
                                                                                      gaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATttgatt             <  2:3834368‑M2/89‑1 (MQ=255)
                                                                                       aaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATttgattg            <  2:3926477‑M2/90‑1 (MQ=255)
                                                                                       aaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATttgattg            <  2:351621‑M2/90‑1 (MQ=255)
                                                                                       aaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATttgattg            <  2:1920092‑M2/90‑1 (MQ=255)
                                                                                       aaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATttgattg            <  1:563033‑M2/90‑1 (MQ=255)
                                                                                            nctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGattgaattg       >  1:3519751‑M2/6‑100 (MQ=255)
                                                                                            gctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGattgaattg       <  2:2742129‑M2/95‑1 (MQ=255)
                                                                                            gctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGattgaattg       >  1:1264386‑M2/6‑100 (MQ=255)
                                                                                             ctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGattgaattga      >  2:2213329‑M2/5‑100 (MQ=255)
                                                                                             ctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGattgaattga      >  1:745415‑M2/5‑100 (MQ=255)
                                                                                             ctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGattgaattga      >  2:3340847‑M2/5‑100 (MQ=255)
                                                                                             ctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGattgaattga      >  2:1625187‑M2/5‑100 (MQ=255)
                                                                                             ctaaATAATAATCAAGTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCGATTTGattgaattga      <  2:2061847‑M2/96‑1 (MQ=255)
                                                                                              taaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGAttgaattgaa     >  2:1078449‑M2/4‑100 (MQ=255)
                                                                                                aATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAg   >  2:4290036‑M2/2‑100 (MQ=255)
                                                                                                aATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAg   <  2:2442953‑M2/99‑1 (MQ=255)
                                                                                                aATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAg   >  1:2359838‑M2/2‑100 (MQ=255)
                                                                                                 |                                                                                                   
AAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGA  >  NC_000913/1300601‑1300797

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.