| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 986,023 | 0 | G | A | 27.3% | 611.9 / 261.4 | 381 | G320G (GGC→GGT) | ompF | outer membrane porin 1a (Ia;b;F) |
| Reads supporting (aligned to +/- strand): ref base G (132/145); new base A (34/70); total (166/215) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.06e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.66e-01 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 392 total aligned reads displayed.
GGTGTCGTCTGAACCTACGCCCAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGTCTTTCGCTTTAGATTTGGTGTAAGCGATGGACGGACGCAGACCGAAATCG > NC_000913/985924‑986122 | gtgtCGTCTGAACCTACGCCCAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTAGAGATGTTTTTGTTGAAGTAGTAGGTTgcgc < 1:3474333/100‑1 (MQ=255) gtcgtcTGAACCTACGCCCAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCAccc > 1:2199514/1‑100 (MQ=255) gtcgtcTGAACCTACGCCCAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCAccc < 2:3746812/100‑1 (MQ=255) gtcTGAACCTACGCCCAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACt > 1:4167416/1‑100 (MQ=255) gtcTGAACCTACGCCCAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACt < 1:460361/100‑1 (MQ=255) gtcTGAACCTACGCCCAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCACCCACt < 2:4244502/100‑1 (MQ=255) tcTGAACCTACGCCCAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACtt > 1:1721872/1‑100 (MQ=255) tcTGAACCTACGCCCAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCACCCACtt > 1:1037889/1‑100 (MQ=255) cTGAACCTACGCCCAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTc > 1:1323114/1‑100 (MQ=255) cTGAACCTACGCCCAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTATGTTGAAGTAGTAGGTTGCGCCCACTTc > 1:4011785/1‑100 (MQ=255) aaCCTACGCCCAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCaaa < 1:4330926/100‑1 (MQ=255) aCCTACGCCCAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTGGTAGGTTGCGCCCACTTCAAag < 2:696959/100‑1 (MQ=255) aCCTACGCCCAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAag < 2:381180/100‑1 (MQ=255) ccTACGCCCAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCACCCACTTCAAagt > 1:724890/1‑100 (MQ=255) ccTACGCCCAGTTTGTCGTCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGATGTAGTAGGTTGCGCCCACTTCAAagt > 2:4194795/1‑100 (MQ=255) tACGCCCAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCACCCACTTCAAagtag < 2:4094210/100‑1 (MQ=255) tACGCCCAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCACCCACTTCAAagtag < 2:1903719/100‑1 (MQ=255) ctccccAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCACCCACTTCAAagtagt < 2:1265140/97‑1 (MQ=255) aCGCCCAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCAACATCGGTGGACATGTTTTTGTTGAGGTAGTGGGTTGCGCGCAATTTACagtagt < 2:4329844/100‑1 (MQ=37) aCGCCCAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAagtagt > 1:1575498/1‑100 (MQ=255) aCGCCCAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCACCCACTTCAAagtagt < 2:2768457/100‑1 (MQ=255) cGCCCAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCACCCACTTCAAAGTAGtt > 1:2285569/1‑100 (MQ=255) gctcAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCACCCACTTCAAAGTAGTTc > 1:4238343/4‑100 (MQ=255) gCCCAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCTCACTTCAAAGTAGTTc > 1:3638430/1‑100 (MQ=255) gCCCAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTc > 1:3292498/1‑100 (MQ=255) gCCCAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTc > 1:3905266/1‑100 (MQ=255) gCCCAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTc < 2:3547534/100‑1 (MQ=255) cccAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTTTTTTTTTTTTTTGTTGCGCCCACTTCAAAGTAGTTCa > 2:669112/1‑100 (MQ=37) cccAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCa > 2:3906976/1‑100 (MQ=255) cccAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCa > 1:263575/1‑100 (MQ=255) aGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCa < 2:877463/100‑1 (MQ=255) gTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAg < 2:3343345/100‑1 (MQ=255) gTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAg < 1:3031737/100‑1 (MQ=255) ttgttgTCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGAt < 1:2728853/100‑1 (MQ=255) tgttgtCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATc < 1:878520/100‑1 (MQ=255) gttgtCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCa > 2:3836196/1‑100 (MQ=255) gttgtCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCa < 1:992545/100‑1 (MQ=255) gttgtCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCa > 1:2717392/1‑100 (MQ=255) ttgtCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCACCCACTTCAAAGTAGTTCACCAGATCaa < 2:2666893/100‑1 (MQ=255) cAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACATc > 2:3290439/1‑100 (MQ=255) aGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACATCa < 1:2339402/100‑1 (MQ=255) gAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCACCCACTTCAAAGTAGTTCACCAGATCAACATCAc < 2:4156463/100‑1 (MQ=255) aaTCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACATCAcc < 2:1648181/100‑1 (MQ=255) aTCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACATCACCg < 2:1124494/100‑1 (MQ=255) cGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATTAACATCACCGAt < 2:1284156/100‑1 (MQ=255) cGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCACCCACTTCAAAGTAGTTCACCAGATCAACATCACCGAt < 2:846300/100‑1 (MQ=255) cGATCTGGCTGATGGTGTAATTAACATAGGGGGACATGTTTTAGTTGAAGTAGTGGGTTACGCCCACTTCACAGTAGTTCACCAGATCAACATCACCGAt > 2:4031141/1‑100 (MQ=255) gATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATa > 1:2099042/1‑100 (MQ=255) aTCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATAc < 1:284785/100‑1 (MQ=255) tCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATAcc < 2:2482660/100‑1 (MQ=255) cTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCt < 2:3644694/100‑1 (MQ=255) tGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCtt > 1:1269485/1‑100 (MQ=255) ggTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTc > 1:1518626/1‑100 (MQ=255) gTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCt > 2:143498/1‑100 (MQ=255) tgatgaTGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTAc > 1:1077574/1‑100 (MQ=255) tgatgaTGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTAc < 2:2868584/100‑1 (MQ=255) tgatgaTGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTAc > 2:2521260/1‑100 (MQ=255) tgatgaTGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTAc < 1:3100295/100‑1 (MQ=255) gatgatGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACg > 2:1809665/1‑100 (MQ=255) atgatgTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGt > 2:562842/1‑100 (MQ=255) gatgTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCACCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGTCt < 2:2994554/100‑1 (MQ=255) gTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGTCTTTc > 1:933884/1‑100 (MQ=255) aGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGTCTTTCGc > 1:3416148/1‑100 (MQ=255) aGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGTCTTTCGc > 2:3154454/1‑100 (MQ=255) gTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGTCTTTCGCt < 2:3247508/100‑1 (MQ=255) gTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCACCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGTCTTTCGCt < 2:1201166/100‑1 (MQ=255) cAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGTCTTTCGCttt > 1:1407957/1‑100 (MQ=255) aaCATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGTCTTTCGCTTTa < 1:681940/100‑1 (MQ=255) ataTAGCTTGACAAGGTTTTGTTGACGTAGCAGATTGCGCCCACTTCAAAGTAGTTCCCCAATGCAACATCACCTAGACCTGCTACGTCTTTCGCttttg < 2:2021252/98‑3 (MQ=255) cATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGTCTTTCGCTTTAGa > 1:835010/1‑100 (MQ=255) cATAGGTGGACATGCTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGTCTTTCGCTTTAGa < 2:3967335/100‑1 (MQ=255) ggTGGACATGTTTTTGTTGAAGTAGTAGGTTGCACCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGTCTTTCGCTTTAGATTTg < 2:2940482/100‑1 (MQ=255) gTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGTCTTTCGCTTTAGATTTgg < 1:3582455/100‑1 (MQ=255) tGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGTCTTTCGCTTTAGATTTGgt < 2:3679511/100‑1 (MQ=255) ggACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGTCTTTCGCTTTAGATTTGgtg < 2:3036898/100‑1 (MQ=255) ggACATGTTTTTGTTGAAGTAGTAGGTTGCACCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGTCTTTCGCTTTAGATTTGgtg > 1:2507062/1‑100 (MQ=255) gACATGTTTTTGTTGAAGTAGTAGGTTGCACCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGTCTTTCGCTTTAGATTTGgtgt > 1:3449001/1‑100 (MQ=255) cATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGTCTTTCGCTTTAGATTTGGTGTaa > 1:290741/1‑100 (MQ=255) acgTTTTTACTGAAGTAGTACGTCGCACCCACTTCAAAGTAGTTCAGCAGATCAACATCACCGATACCTTCCACGTCTTGCGCTTTAGATTTAGCGTAAg < 2:1525482/98‑1 (MQ=255) tGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGTCTTTCGCTTTAGATTTGGTGTAAGc < 1:1937719/100‑1 (MQ=255) tGTTTTTGTTGAAGTAGTAGGTTGCACCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGTCTTTCGCTTTAGATTTGGTGTAAGc < 2:1970844/100‑1 (MQ=255) ttttGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGTCTTTCGCTTTAGATTTGGTGTAAGCGAt > 2:2684802/1‑100 (MQ=255) ttttGTTGAAGTAGTAGGTTGCACCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGTCTTTCGCTTTAGATTTGGTGTAAGCGAt < 2:2253237/100‑1 (MQ=255) tgttgttgAAGTAGTAGGTTGCACCCACTTTAAAGTAGTTCACCAGATAAACATCACCGATACCTTCTACGGCTTTCGCTTTAGATTTGGTGTAAGCGAt < 2:3411158/98‑1 (MQ=255) ttgttgAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGTCTTTCGCTTTAGATTTGGTGTAAGCGATgg < 2:913202/100‑1 (MQ=255) ttgttgAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGTCTTTCGCTTTAGATTTGGTGTAAGCGATgg < 2:2590931/100‑1 (MQ=255) gttgAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGTCTTTCGCTTTAGATTTGGTGTAAGCGATggac > 2:147210/1‑100 (MQ=255) ttgAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGTCTTTCGCTTTAGATTTGGTGTAAGCGATggacg < 2:2071987/100‑1 (MQ=255) gAAGTAGTAGTTTGCGCCCGCTTCAAAGTAGTACACGAGGTTAACATTACCGATACCTTCTACGTCTTTCGCTTTAGGTTTGGTTTAAGCGATggacgga > 2:1036170/1‑100 (MQ=255) gAAGTAGTAGATTGCGCCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGTCTTTAGCTTTAGATTTGGTGTAAGCGATggccgga > 2:2173899/1‑100 (MQ=255) agtagtAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGTCTTTCGCTTTAGATTTGGTGTAAGCGATGgacggacg > 1:52215/1‑100 (MQ=255) gtagtaGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGTCTTTCGCTTTAGATTTGGTGTAAGCGATGGACGGACGc > 2:3205780/1‑100 (MQ=255) gtagGTTGCAGCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGTCTTTCGCTTTAGATTTGGTGTAAGCGATGGACGGACGCAGa > 1:3865396/1‑100 (MQ=255) tagGTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGTCTTTCGCTTTAGATTTGGTGTAAGCGATGGACGGACGCAGAc < 2:718555/100‑1 (MQ=255) gTTGCGCCCACGTCAAAGGAGTTCACCAGATCAACATCACCGATACCTTCTACGTCTTTCGCTTTAGATTTGGTGTAAGCGATGGACGGACGCAGACCGa < 1:1761389/100‑1 (MQ=255) tGCGCCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGTCTTTCGCTTTAGATTTGGTGTAAGCGATGGACGGACGCAGACCGaaa > 1:2529869/1‑100 (MQ=255) cgcCCACTTCAAAGTAGTTCTCCAGATCAACATCACCGATACCTTCTACGTCTTTCGCTTTAGATTTGGTGTAAGCGATGGACGGACGCAGACCGAAATc < 1:3201102/100‑1 (MQ=255) cgcCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGTCTTTCGCTTTAGATTTGGTGTAAGCGATGGACGGACGCAGACCGAAATc > 2:2548144/1‑100 (MQ=255) gcCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGTCTTTCGCTTTAGATTTGGTGTAAGCGATGGACGGACGCAGACCGAAATCg > 1:3799751/1‑100 (MQ=255) gcCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGTCTTTCGCTTTAGATTTGGTGTAAGCGATGGACGGACGCAGACCGAAATCg > 2:3472291/1‑100 (MQ=255) | GGTGTCGTCTGAACCTACGCCCAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACATCACCGATACCTTCTACGTCTTTCGCTTTAGATTTGGTGTAAGCGATGGACGGACGCAGACCGAAATCG > NC_000913/985924‑986122 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |