New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2765420 =271 (1.330)8 (0.050) 7/268 9.2 4.2% intergenic (‑267/+93) yfjL/yfjM CP4‑57 putative defective prophage, DUF4297/DUF1837 polymorphic toxin family protein/CP4‑57 prophage; uncharacterized protein
?NC_000913 = 2765411 158 (1.040)intergenic (‑258/+102) yfjL/yfjM CP4‑57 putative defective prophage, DUF4297/DUF1837 polymorphic toxin family protein/CP4‑57 prophage; uncharacterized protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 240 total aligned reads displayed.

AGACAAGAAAAAATTCTACGTCGAAACAGAACGAGCAGAGAGCCCAAAACAAGCCATCATGATGAGCTATAAGGAGTGGGGTCCGGATGGGCAAGGCATCAACAATATAGAAAGCCATGAACACGCGATGTTGACATTGCTCAAAGAGCATCGAGATATGACCCTACCAACCAGGAAATAATGCGTGCAACTGTGTTTTATAATATCAAGTGTGATTACAATCGCTGGCGGTGCCATAGTGCCATAGTGCCATAGTGCCATAGTGCCATAGTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/2765693‑2765420
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgccatagtgccatagtgccatagtgccatagtgccatagtgcGGTTGGCGGTCTCAGCTCTGAACTATTTGAAAACCAAAACCTTGATTAAGGCTGTGCCTACCTTACGTTAGTTGGGGCAGTATGTTATATAACCAAATTAGACGTCAGGGTTACAATATTTGTGGAATCCTGAAAAGCTTGATACCTGCGACCGAGAATGGCTGTGAAGTATTTAGATCACTGGTGATGATGCAGTGATCCGATTGGACTGTGTCATAACATCTCCTTAATTTTCGCA  <  NC_000913/2765411‑2765174
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                
AGACAAGAAAAAATTCTACGTCGAAACAGAACGAGCAGAGAGCCCAAAACAAGCCATCATGATGAGCTATAAGGAGTGGGGTCCGGATGGGCAAGGCATCAACAATATAGAAAGCCATGAACACGCGATGTTGACATTGCTCAAAGAGCATCGAGATATGACCCTACCAACCAGGAAATAATGCGTGCAACTGTGTTTTATAATATCAAGTGTGATTACAATCGCTGGCGGTGCCA                                                                                                                                                                                                                                                                                      <  1:1991655/236‑1
AGACAAGAAAAAATTCTACGTCGAAACAGAACGAGCAGAGAGCCCAAAACAAGCCATCATGATGAGCTATAAGGAGTGGGGTCCGGATGGGCAAGGCATCAACAATATAGAAAGCCATGAACACGCGATGTTGACATTGCTCAAAGAGCATCGAGATATGACCCTACCAACCAGGAAATAATGCGTGCAACTGTGTTTTATAATATCAAGTGTGATTACAATCGCTGGCGGTGCCA                                                                                                                                                                                                                                                                                      <  2:1890118/236‑1
AGACAAGAAAAAATTCTACGTCGAAACAGAACGAGCAGAGAGCCCAAAACAAGCCATCATGATGAGCTATAAGGAGTGGGGTCCGGATGGGCAAGGCATCAACAATATAGAAAGCCATGAACACGCGATGTTGACATTGCTCAAAGAGCATCGAGATATGACCCTACCAACCAGGAAATAATGCGTGCAACTGTGTTTTATAATATCAAGTGTGATTACAATCGCTGGCGGTGC                                                                                                                                                                                                                                                                                        <  1:2381781/234‑1
   CAAGAAAAAATTCTACGTCGAAACAGAACGAGCAGAGAGCCCAAAACAAGCCATCATGATGAGCTATAAGGAGTGGGGTCCGGATGGGCAAGGCATCAACAATATAGAAAGCCATGAACACGCGATGTTGACATTGCTCAAAGAGCATCGAGATATGACCCTACCAACCAGGAAATAATGCGTGCAACTGTGTTTTATAATATCAAGTGTGATTACAATCGCTGGCGGTGCCATAGTGC                                                                                                                                                                                                                                                                                <  1:2497312/239‑1
     AGAAAAAATTCTACGTCGAAACAGAACGAGCAGAGAGCCCAAAACAAGCCATCATGATGAGCTATAAGGAGTGGGGTCCGGATGGGCAAGGCATCAACAATATAGAAAGCCATGAACACGCGATGTTGACATTGCTCAAAGAGCATCGAGATATGACCCTACCAACCAGGAAATAATGCGTGCAACTGTGTTTTATAATATCAAGTGTGATTACAATCGCTGGCGGTGCCATAGTGCCA                                                                                                                                                                                                                                                                              <  2:728770/239‑1
       AAAAAATTCTACGTCGAAACAGAACGAGCAGAGAGCCCAAAACAAGCCATCATGATGAGCTATAAGGAGTGGGGTCCGGATGGGCAAGGCATCAACAATATAGAAAGCCATGAACACGCGATGTTGACATTGCTCAAAGAGCATCGAGATATGACCCTACCAACCAGGAAATAATGCGTGCAACTGTGTTTTATAATATCAAGTGTGATTACAATCGCTGGCGGTGCCATAGTGC                                                                                                                                                                                                                                                                                <  2:2205968/235‑1
             TTCTACGTCGAAACAGAACGAGAAGAGAGCCCAAAACAAGCCATCATGATGAGCAATAAGGAGTGGGGTCCGGATGGGCAAGGCATCAAAAATACAGAAAGCCATGAACACGCGATGTTGACATTGATCAAAGAGCATCGAGATATGACCCTACCAACCAGGAAATAATGCGTGCAACTGTGTTTTATAATATCAAGTGTGATTACAATCGCTGGCGGTGCCATAGTGCCATAGTGCCA                                                                                                                                                                                                                                                                      <  2:252596/239‑1
                   GTCGAAACAGAACGAGCAGAGAGCCCAAAACAAGCCATCATGATGAGCTATAAGGAGTGGGGTCCGGATGGGCAAGGCATCAACAATATAGAAAGCCATGAACACGCGATGTTGACATTGCTCAAAGAGCATCGAGATATGACCCTACCAACCAGGAAATAATGCGTGCAACTGTGTTTTATAATATCAAGTGTGATTACAATCGCTGGCGGTGCCATAGTGCCATAGTGCCATAGTGC                                                                                                                                                                                                                                                                <  2:918528/239‑1
                   GTCGAAACAGAACGAGCAGAGAGCCCAAAACAAGCCATCATGATGAGCTATAAGGAGTGGGGTCCGGATGGGCAAGGCATCAACAATATAGAAAGCCATGAACACGCGATGTTGACATTGCTCAAAGAGCATCGAGATATGACCCTACCAACCAGGAAATAATGCGTGCAACTGTGTTTTATAATATCAAGTGTGATTACAATCGCTGGCGGTGCCATAGTGCCATAGTGCCATAGTGC                                                                                                                                                                                                                                                                <  1:519660/239‑1
                     CGAAACAGAACGAGCAGAGAGCCCAAAACAAGCCATCATGATGAGCTATAAGGAGTGGGGTCCGGATGGGCAAGGCATCAACAATATAGAAAGCCATGAACACGCGATGTTGACATTGCTCAAAGAGCATCGAGATATGACCCTACCAACCAGGAAATAATGCGTGCAACTGTGTTTTATAATATCAAGTGTGATTACAATCGCTGGCGGTGCCATAGTGCCATAGTGCCATAGTGCCA                                                                                                                                                                                                                                                              <  2:2387823/239‑1
                      GAAACAGAACGAGCAGAGAGCCCAAAACAAGCCATCATGATGAGCTATAAGGAGTGGGGTCCGGATGGGCAAGGCATCAACAATATAGAAAGCCATGAACACGCGATGTTGACATTGCTCAAAGAGCATCGAGATATGACCCTACCAACCAGGAAATAATGCGTGCAACTGTGTTTTATAATATCAAGTGTGATTACAATCGCTGGCGGTGCCATAGTGCCATAGTGCCATAGTGCCA                                                                                                                                                                                                                                                              <  1:626748/238‑1
                                  GCAGAGAGCCCAAAACAAGCCATCATGATGAGCTATAAGGAGTGGGGTCCGGATGGGCAAGGCATCAACAATATAGAAAGCCATGAACACGCGATGTTGACATTGCTCAAAGAGCATCGAGATATGACCCTACCAACCAGGAAATAATGCGTGCAACTGTGTTTTATAATATCAAGTGTGATTACAATCGCTGGCGGTGCCATAGTGCCATAGTGCCATAG                                                                                                                                                                                                                                                                   >  1:521858/1‑221
                                  GCAGAGAGCCCAAAACAAGCCATCATGATGAGCTATAAGGAGTGGGGTCCGGATGGGCAAGGCATCAACAATATAGAAAGCCATGAACACGCGATGTTGACATTGCTCAAAGAGCATCGAGATATGACCCTACCAACCAGGAAATAATGCGTGCAACTGTGTTTTATAATATCAAGTGTGATTACAATCGCTGGCGGGGCCATAGTGCCATAGTGCCATAGTGGCATAGTGCCATAGT                                                                                                                                                                                                                                                  >  1:2536767/1‑238
                                       GAGCCCAAAACAAGCCATCATGATGAGCTATAAGGAGTGGGGTCCGGATGGGCAAGGCATCAACAATATAGCAAGCCATGAACACGCGATGTTGACATTGCTCAAAGAGCATCGAGATATGACCCTACCAACCAGGAAATAATGCGTGCAACTGTGTTTTATAATATCAAGTGTGATTACAATCGCTGGCGGTGCCATAGTGCCATAGTGCCATAGTGCCATAGTGCCA                                                                                                                                                                                                                                                      >  1:168883/1‑229
                                                    GCCATCATGATGAGCTATAAGGAGTGGGGTCCGGATGGGCAAGGCATCAACAATATAGAAAGCCATGAACACGCGATGTTGACATTGCTCAAAGAGCATCGAGATATGACCCTACCAACCAGGAAATAATGCGTGCAACTGTGTTTTATAATATCAAGTGTGATTACAATCGCTGGCGGTGCCATAGTGC                                                                                                                                                                                                                                                                                <  1:2209939/190‑1
                                                              TGAGCTATAAGGAGTGGGGTCCGGATGGGCAAGGCATCAACAATATAGAAAGCCATGAACACGCGATGTTGACATTGCTCAAAGAGCATCGAGATATGACCCTACCAACCAGGAAATAATGCGTGCAACTGTGTTTTATAATATCAAGTGTGATTACAATCGCTGGCGGTGCCATAGTGCCATAGTGCCATAGTGCCATAGTGCCA                                                                                                                                                                                                                                                      >  2:2741907/1‑206
                                                               GAGCTATAAGGAGTGGGGTCCGGATGGGCAAGGCATCAACAATATAGAAAGCCATGAACACGCGATGTTGACATTGCTCAAAGAGCATCGAGATATGACCCTACCAACCAGGAAATAATGCGTGCAACTGTGTTTTATAATATCAAGTGTGATTACAATCGCTGGCGGTGCCATAGTGCCATAGTGC                                                                                                                                                                                                                                                                        <  2:1688244/187‑1
                                                                            TGGGGTCCGGATGGGCAAGGCATCAACAATATAGAAAGCCATGAACACGCGATGTTGACATTGCTCAAAGAGCATCGAGATATGACCCTACCAACCAGGAAATAATGCGTGCAACTGTGTTTTATAATATCAAGTGTGATTACAATCGCTGGCGGTGCCATAGTGCCATAGTGCCATAG                                                                                                                                                                                                                                                                   <  1:315468/179‑1
                                                                               GGTCCGGATGGGCAAGGCATCAACAATATAGAAAGCCATGAACACGCGATGTTGACATTGCTCAAAGAGCATCGAGATATGACCCTACCAACCAGGAAATAATGCGTGCAACTGTGTTTTATAATATCAAGTGTGATTACAATCGCTGGCGGTGCCATAGTGCCATAGTGCCATAG                                                                                                                                                                                                                                                                   >  2:673262/1‑176
                                                                                 TCCGGATGGGCAAGGCATCAACAATATAGAAAGCCATGAACACGCGATGTTGACATTGCTCAAAGAGCATCGAGATATGACCCTACCAACCAGGAAATAATGCGTGCAACTGTGTTTTATAATATCAAGTGTGATTACAATCGCTGGCGGTGCCATAGTGCCATAGTGCCATAGTGCCATATTGCCA                                                                                                                                                                                                                                                      <  2:1803155/187‑1
                                                                                    GGATGGGCAAGGCATCAACAATATAGAAAGCCATGAACACGCGATGTTGACATTGCTCAAAGAGCATCGAGATATGACCCTACCAACCAGGAAATAATGCGTGCAACTGTGTTTTATAATATCAAGTGTGATTACAATCGCTGGCGGTGCCATAGTGCCA                                                                                                                                                                                                                                                                              <  2:202425/160‑1
                                                                                         GGCAAGGCATCAACAATATAGAAAGCCATGAACACGCGATGTTGACATTGCTCAAAGAGCATCGAGATATGACCCTACCAACCAGGAAATAATGCGTGCAACTGTGTTTTATAATATCAAGTGTGATTACAATCGCTGGCGGTGCCATAGTGCCATAGTGCCA                                                                                                                                                                                                                                                                      >  2:2598466/1‑163
                                                                                                   CAACAATATAGAAAGCCATGAACACGCGATGTTGACATTGCTCAAAGAGCATCGAGATATGACCCTACCAACCAGGAAATAATGCGTGCAACTGTGTTTTATAATATCAAGTGTGATTACAATCGCTGGCGGTGCCATAGTGCCA                                                                                                                                                                                                                                                                              <  2:326057/145‑1
                                                                                                              AAAGCCATGAACACGCGATGTTGACATTGCTCAAAGAGCATCGAGATATGACCCTACCAACCAGGAAATAATGCGTGCAACTGTGTTTTATAATATCAAGTGTGATTACAATCGCTGGCGGTGCCA                                                                                                                                                                                                                                                                                      >  1:434003/1‑126
                                                                                                                    ATGAACACGCGATGTTGACATTGCTCAAAGAGCATCGAGATATGACCCTACCAACCAGGAAATAATGCGTGCAACTGTGTTTTATAATATCAAGTGTGATTACAATCGCTGGCGGTGCCATAGTGCCATAGTGCCATAGTGCCATAGT                                                                                                                                                                                                                                                          >  1:692496/1‑148
                                                                                                                     TGAACACGCGATGTTGACATTGCTCAAAGAGCATCGAGATATGACCCTACCAACCAGGAAATAATGCGTGCAACTGTGTTTTATAATATCAAGTGTGATTACAATCGCTGGCGGTGCCA                                                                                                                                                                                                                                                                                      >  2:1175337/1‑119
                                                                                                                     TGAACACGCGATGTTGACATTGCTCAAAGAGCATCGAGATATGACCCTACCAACCAGGAAATAATGCGTGCAACTGTGTTTTATAATATCAAGTGTGATTACAATCGCTGGCGGTGCCA                                                                                                                                                                                                                                                                                      <  1:1175337/119‑1
                                                                                                                                 GTTGACATTGCTCAAAGAGCATCGAGATATGACCCTACCAACCAGGAAATAATGCGTGCAACTGTGTTTTATAATATCAAGTGTGATTACAATCGCTGGCGGTGCCATAGTGCCATAGTGCCATAGTGCCA                                                                                                                                                                                                                                                              >  1:1256028/1‑131
                                                                                                                                          GCTCAAAGAGCATCGAGATATGACCCTACCAACCAGGAAATAATGCGTGCAACTGTGTTTTATAATATCAAGTGTGATTACAATCGCTGGCGGTGCCATAGTGCCATAGTGCCA                                                                                                                                                                                                                                                                      <  1:474854/114‑1
                                                                                                                                          GCTCAAAGAGCATCGAGATATGACCCTACCAACCAGGAAATAATGCGTGCAACTGAGTTTTATAATATCAAGTGTGATTACAATCGCTGGCGGTGCCATAGTGCCATAGTGCCA                                                                                                                                                                                                                                                                      >  2:474854/1‑114
                                                                                                                                                     ATCGAGATATGACCCTACCAACCAGGAAATAATGCGTGCAACTGTGTTTTATAATATCAAGTGTGATTACAATCGCTGGCGGTGCCATAGTGCCATAGTGCCATAGTGCCA                                                                                                                                                                                                                                                              >  2:863058/1‑111
                                                                                                                                                     ATCGAGATATGACCCTACCAACCAGGAAATAATGCGTGCAACTGTGTTTTATAATATCAAGTGTGATTACAATCGCTGGCGGTGCCATAGTGCCATAGTGCCATAGTGCCA                                                                                                                                                                                                                                                              <  1:863058/111‑1
                                                                                                                                                                ACCCTACCAACCAGGAAATAATGCGTGCAACTGTGTTTTATAATATCAAGTGTGATTACAATCGCTGGCGGTGCCATAGTGCCATAGTGCCATAGTGCCA                                                                                                                                                                                                                                                              >  1:295705/1‑100
                                                                                                                                                                                    ATGCGTGCAACTGTGTTTTATAATATCAAGTGTGATTACAATCGCTGGCGGTG                                                                                                                                                                                                                                                                                         >  2:514878/1‑53
                                                                                                                                                                                     TGCGTGCAACTGTGTTTTATAATATCAAGTGTGATTACAATCGCTGGCGGTGCCATAGTGCCA                                                                                                                                                                                                                                                                              >  2:300798/1‑63
                                                                                                                                                                                        GTGCAACTGTGTTTTATAATATCAAGTGTGATTACAATCGCTGGCGGTGCCATAGTGCCATAGTGCCATAGTGCCATAGTGCCA                                                                                                                                                                                                                                                      <  1:1823247/84‑1
                                                                                                                                                                                         TGCAACTGTGTTTTATAATATCAAGTGTGATTACAATCGCTGGCGGTG                                                                                                                                                                                                                                                                                         <  1:711735/48‑1
                                                                                                                                                                                                 TGTTTTATAATATCAAGTGTGATTACAATCGCTGGCGGTGCCATAGTGCCATAGTGCCATAGTGCCATAGTGCCATAGTGCGGTTGGCGGTCT                                                                                                                                                                                                                                    >  2:547037/1‑93
                                                                                                                                                                                                 TGTTTTATAATATCAAGTGTGATTACAATCGCTGGCG‑‑‑‑‑‑‑‑GTGCCATAGTGCCATAGTGCCATAGTGCCATAGTGCGGTTGGCGGTCTCAGCTCTGAACTATTTGAAAACCAAAACCTTGATTAAGGCTGTGCCTACCTTACGTTAGTTGGGGCAGTATGTTATATAACCAAATTAGACGTCA                                                                                                                                     <  2:1773375/180‑1
                                                                                                                                                                                                 TGTTTTATAATATCAAGTGTGATTACAATCGCTGGCG‑‑‑‑‑‑‑‑GTGCCATAGTGCCATAGTGCCATAGTGCCATAGTGCGGTTGGCGGTCTCAGCTCTGAACTATTTGAAAACCAAAACCTTGATTAAGGCTGTGCCTACCTTACGTTAGTTGGGGCAGTATGTTATATAACCAAATTAGACGTCA                                                                                                                                     >  1:1773375/1‑180
                                                                                                                                                                                                   TTTTATAATATCAAGTGTGATTACAATCGCTGGCGGTGCCATAGTGCCATAGTGCCA                                                                                                                                                                                                                                                                      <  1:1760944/57‑1
                                                                                                                                                                                                   TTTTATAATATCAAGTGTGATTACAATCGCTGGCGGTGCCATAGTGCCA                                                                                                                                                                                                                                                                              <  1:1548026/49‑1
                                                                                                                                                                                                      TATAATATCAAGTGTGATTACAATCGCTGGCGGTGCCATAGTGCCATAGTGCCATAGTGCCATAGTGCCATAGTGCGGTTGGCGGTCTCAGCTCTGAACTATTTGAAAACCAAAACCTTGATTAAGGCTGTGCCTACCTTACGTTAGTTGGGGCAGTATGTTATATAACCAAATTAGACGTC                                                                                                                                      >  2:2470274/1‑182
                                                                                                                                                                                                           TATCAAGTGTGATTACAATCGCTGGCGGTGCCATAGTGCCATA                                                                                                                                                                                                                                                                            <  1:1864054/43‑1
                                                                                                                                                                                                                      ATTACAATCGCTGGCGGTGCCATAGTGCCATAGTGC                                                                                                                                                                                                                                                                        <  1:2600456/36‑1
                                                                                                                                                                                                                       TTACAATCGCTGGCGGTGCCATAGTGCCATAGTGCCATAGTGCCATAGTGCCA                                                                                                                                                                                                                                                      >  2:2374952/1‑53
                                                                                                                                                                                                                               tgcacatGTGCCATAGTGCCATAGTGCCATTGTGACATAGTGACCTAGTTCGGTTGGCGGTCTCATCTCTTAACTATTTGAAAACCAAAACCTTGATTAATGCAGTGCATAACTTACGTTAGTTGGGGCAGTATGATATATAACCAAATTAGACGTCAGGGTTACAATATTTGTGTAATCCTAAAAAGATTGATACCTGCGACCGAGAATGGCTGTGAAGTATTTAGATCACTGGTGA                                                     <  2:1293789/231‑1
                                                                                                                                                                                                                                        GCCATAGTGCCATAGTGCCATAGGGCCATAGTGCCATAGTGCGGTTGGCGGTCTCAGCTCTGAACTATTTGAAAACCAAAACCTTGATTAAGGCTGTGCCTACCTTACGTTAGTTGGGGCAGTATGTTATATAACCAAATTAGACGTCAGGGTTACAATATTTGTGGAATCCTGAAAAGCTTGATACCTGCGACCGAGAATGGCTGTGAAGTATTTAGATCACTGGTGATGATGC                                               <  2:2254476/235‑1
                                                                                                                                                                                                                                         CCATAGTGCCATAGTGCCATAGTGCCATAGTGCCATAGTGCGGTTGGCGGTCTCAGCTCTGAACTATTTGAAAACCAAAACCTTGATTAAGGCTGTGCCTACCTTACGTTAGTTGGGGCAGTATGTTATATAACCAAATTAGACGTCAGGGTTACAATATTTGTGGAATCCTGAAA                                                                                                         <  1:2346597/176‑1
                                                                                                                                                                                                                                         CCATAGTGCCATAGTGCCATAGTGCCATAGTGCCATAGTGCGGTTGGCGGTCTCAGCTCTGAACTATTTGAAAACCAAAACCTTGATTAAGGCTGTGCCTACCTTACGTTAGTTGGGGCAGTATGTTATATAACCAAA                                                                                                                                               >  2:2413085/1‑138
                                                                                                                                                                                                                                         CCATAGTGCCATAGTGCCATAGTGCCATAGTGCCATAGTGCGGTTGGCGGTCTCAGCTCTGAACTATTTGAAAACCAAAACCTTGATTAAGGCTGTGCCTACCTTACGTTAGTTGGGGCAGTATGTTATATAACCAAA                                                                                                                                               <  1:2413085/138‑1
                                                                                                                                                                                                                                         CCATAGTGCCATAGTGCCATAGTGCCATAGTGCCATAGTGCGGTTGGCGGTCTCAGCTCTGAACTATTTGAAAACCAAAACCTTGATTAAGGCTGTGCCTACCTTACG                                                                                                                                                                             >  1:1651023/1‑108
                                                                                                                                                                                                                                          CATAGTGCCATAGTGCCATAGTGCCATAGTGCCATAGTGCGGTTGGCGGTCTCAGCTCTGAACTATTTGAAAACCAAAACCTTGATTAAGGCTGTGCCTACCTTACGTTAGTTGGGGCAGTATGTTATATAACCAAATTAGACGTCAGGGTTACAATATTTGTGGAATCCTGAAAAGCTTGATACCTGCGACCGAGAATGGCTGTGAAGTATTTAGATCACTGGTGATGATGCAGTGA                                          <  1:2005176/238‑1
                                                                                                                                                                                                                                           ATAGTGCCATAGTGCCATAGTGCCATAGTGCCATAGGGCGGTTGGCGGTCTCAGCTCTGAACTATTTGAAAACCAAAACCTTGATTAAGGCTGTGCCTACCTTACGTTAGTTGGGGCAGTATGTTATATAACCAAATTAGACGTCAGGGGTACAATATTTGTGGAATCCTGAAAAGCTTGATACCTGCGACCGAGAATGGCTGTGAAGTATTTAGATCACTGGTGATGATGCAGTGAT                                         >  2:1857339/1‑238
                                                                                                                                                                                                                                            TAGTGCCATAGTGCCATAGTGCCATAGTGCCATAGTGCGGTTGGCGGTCTCAGCTCTGCACTCTTTGAAAACCAAAACCTTGATTAAGGCTGTGCCTACCTTACGTTAGTTGGGGCAGTATGTTATATAACCAAATTAGACGTCAGGGTTACAATATTTGTGGAATCCTGAAAAGCTTGATACCTGCGACCGAGAATGGCTGTGAAGTATTTAGATCACTGGTGGTGATGCAGTGGTCC                                       >  2:693103/1‑239
                                                                                                                                                                                                                                                 CCATAGTGCCATAGTGCCATAGTGCCATAGTGCGGTTGGCGGTCTCAGCTCTGAACTATTTGAAAACCAAAACCTTGATTAAGGCTGTGCCTACCTTACGTTAGTTGGGGCAGTATGTTATATAACCAAATTAGACGTCAGGGTTACAATATTTGTGGAATCCTGAAAAACTTGATACCTGCGACCGAGAATGGCTGGGAAGTATTTAGATCACTGGTGATGATGCAGTGACCCGATTG                                  >  1:2297105/1‑239
                                                                                                                                                                                                                                                    TAGTGCCATAGTGCCATAGTGCCATAGTGCGGTTGGCGGTCTCAGCTCTGAACTATTTGAAAACCAAAACCTTGATTAAGGCTGTGCCTACCTTACGTTAGTTGGGGC                                                                                                                                                                  <  2:580093/108‑1
                                                                                                                                                                                                                                                      GTGCCATAGTGCCATAGTGCCATAGTGCGGTTGGCGGTCTCAGCTCTGAACTATTTGAAAACCAAAACCTTGATTAAGGCTGTGCCTACCTTACGTTAGTTGGGG                                                                                                                                                                   <  1:984234/105‑1
                                                                                                                                                                                                                                                       TGCCATAGTGCCATAGTGCCATAGTGCGGTTGGCGGTCTCAGCTCTGAACTATTTGAAAACCAAAACCTTGATTAAGGCTGTGCCTACCTTACGTTAGTTGGGGCAGTATGTTATATAACCAAATTAGACGTCAGGGTTACAATATTTGTGGAATCCTGAAAAGCTTGATACCTGCGACCGAGAATGGCTGTGAAGTATTTAGATCACTGGTGATGATGCAGTGATCCGATTGG                                 >  1:2050726/1‑234
                                                                                                                                                                                                                                                       TGCCATAGTGCCATAGTGCCATAGTGCGGTTGGCGGTCTCAGCTCTGAACTATTTGAAAACCAAAACCTTGATTAAGGCTGTGCCTACCTTACGTTAGTTGGGGCAGTATGTTATATAACCAAATTAGACGTCAGGGTTACAATATTTGTGGAATCCTGAAAAGCTTGATACCTGCGA                                                                                         >  1:1587211/1‑178
                                                                                                                                                                                                                                                       TGCCATAGTGCCATAGTGCCATAGTGCGGTTGGCGGTCTCAGCTCTGAACTATTTGAAAACCAAAACCTTGATTAAGGCTGTGCCTACCTTACGTTAGTTGGGGCAGTATGTTATATAACCAAATTAGACGTCAGGGTTACAATATTTGTGGAATCCTGAAAAGCTTGATACCTGCGA                                                                                         <  2:1587211/178‑1
                                                                                                                                                                                                                                                       TGCCATAGTGCCATAGTGCCATAGTGCGGTTGGCGGTCTCAGCTCTGAACTATTTGAAAACCAAAACC                                                                                                                                                                                                       >  2:1183124/1‑68
                                                                                                                                                                                                                                                       TGCCATAGTGCCATAGTGCCATAGTGCGGTTGGCGGTCTCAGCTCTGAACTATTTGAAAACCAAAACC                                                                                                                                                                                                       <  1:1183124/68‑1
                                                                                                                                                                                                                                                        GCCATAGTGCCATAGTGCCATAGTGCGGTTGGCGGTCTCAGCTCTGAACTATTTGAAAACCAAAACCTTGATTAAGGCTGTGCCTACCTTACGTTAGTTGGGGCAGTATGTTATATAACCAAATTAGACGTCAGGGTTACAATATTTGTGGAATCCTGAAAAGCTTGATACCTGCGACCGAGAATGGCTGTGAAGTATTTAGATCACTGGTGATGATGCAGTGATCCGATTGGACTG                             <  2:183975/237‑1
                                                                                                                                                                                                                                                        GCCATAGTGCCATAGTGCCATAGTGCGGTTGGCGGTCTCAGCTCTGAACTATTTGAAAACCAAAACCTTGATTAAGGCTGTGCCTACCTTACGTTAGTTGGGGCAGTATGTTATATAACCAAATTAGACGTCAGGGTTACAATATTTGTGGAATCCTGAAAAGCTTGATACCTGCGACCGAGAATGGCTGTGAAGTATTTAGATCACTGGTGATGATGCAGTGATCCGATTGGAC                               <  1:2706128/235‑1
                                                                                                                                                                                                                                                        GCCATAGTGCCATAGTGCCATAGTGCGGTTGGCGGTCTCAGCTCTGAACTATTTGAAAACCAAAACCTTGATTAAGGCTGTGCCTACCTTACGTTAGTTGGGGCAGTATGTTATATAACCAAATTAGACGTCAGGGTTACAATATTTGTGGAATCCTGAAAAGCTTGATACCTGCGACCGAGAATGGCTGTGAAGTATTTAGATCACTGGTGATGATGCAGTGATCCGAGTGGAC                               <  2:1701879/235‑1
                                                                                                                                                                                                                                                         CCATAGTGCCATAGTGCCATAGTGCGGTTGGCGGTCT                                                                                                                                                                                                                                    <  1:589324/37‑1
                                                                                                                                                                                                                                                         CCATAGTGCCATAGTGCCATAGTGCGGTTAGCGGTCTCAGCTCTGAACTATTTGAAAACCAAAACCTTGATTAAGG                                                                                                                                                                                             <  1:468619/76‑1
                                                                                                                                                                                                                                                            TAGTGCCATAGTGCCATAGTGCGGTTGGCGGTCTCAGCTC                                                                                                                                                                                                                              >  2:2002877/1‑40
                                                                                                                                                                                                                                                               TGCCATAGTGCCATAGTGCGGTTGGCGGTCTCAGCTCTGAACTATTTGAAAACCAAAACCTTGATTAAGGCTGTGCCTACCTTACGTTAGTTGGGGCAGTATGTTATATAACCAAATTAGACGTCAGGGTTACAATATTTGTGGAATCCTGAAAAGCTTGATACCTGCGACCGAGAATGGCTGTGAAGTATTTAGATCACTGGTGATGATGCAGTGATCCGCTTGGACTGTGTCATAct                    >  2:1030292/1‑237
                                                                                                                                                                                                                                                               TGCCATAGTGCCATAGTGCGGTTGGCGGTCTCAGCTCTGAACTATTTGAAAACCAAAACCTTGATTAAGGCTGTGCCTACCTTACGTTAGTTGGGGCAGTATGTTATATAACCAAATTAGACGTCAGGGTTACAATATTTGTGGAATCCTGAAAAGCTTGATACCTGCGACCGAGAATGGCTGTGAAGTATTTAGAT                                                              >  1:35683/1‑197
                                                                                                                                                                                                                                                               TGCCATAGTGCCATAGTGCGGTTGGCGGTCTCAGCTCTGAACTATTTGAAAACCAAAACCTTGATTAAGGCTGTGCCTACCTTACGTTAGTTGGGGCAGTATGTTATATAACCAAATTAGACGTCAGGGTTACAATATTTGTGGAATCCTGAAAAGCTTGATACCTGCGACCGAGAATGGCTGTGAAGTATTTAGAT                                                              <  2:35683/197‑1
                                                                                                                                                                                                                                                               TGCCATAGTGCCATAGTGCGGTTGGCGGTCTCAGCTCTGAACTATTTGAAAACCAAAACCTTGATTAAGGCTGTGCCTACCTTACGTTAGTTGGGGCA                                                                                                                                                                 <  1:1794788/98‑1
                                                                                                                                                                                                                                                                 CCATAGTGCCATAGTGCGGTTGGCGGTCTCAGCTCTGAACTATTTGAAAACCAAAACCTTGATTAAGGCTGTGCCTACCTTACGTTAGTTGGGGCAGTATGTTATATAACCAAATTAGACGTCAGGGTTACAATATTTGTGGAATCCTGAAAAGCTTGATACCTGCGACCGAGAA                                                                                  <  1:719739/175‑1
                                                                                                                                                                                                                                                                 CCATAGTGCCATAGTGCGGTTGGCGGTCTCAGCTCTGAACTATTTGAAAACCAAAACCTTGATTAAGGCTGTGCCTACCTTACGTTAGTTGGGGCAGTATGTTATATAACCAAATTAGACGTCAGGGTTACAATATTTGTGGAATCCTGAAAAGCTTGATACCTGCGACCGAGAA                                                                                  >  2:719739/1‑175
                                                                                                                                                                                                                                                                 CCATAGTGCCATAGTGCGGTTGGCGGTCTCAGCTCTGAACTATTTGAAAACCAAAACCTTGATTAAGGCTGTGCCTACCTTACGTTAGTTGGGGCA                                                                                                                                                                 <  2:1613880/96‑1
                                                                                                                                                                                                                                                                   ATAGTGCCATAGTGCGGTTGGCGGTCTCAGCTCTGAACTATTTGAAAACCAAAACCTTGATTAAGGCTGTGCCTACCTTACGTTAGTTGGGGCA                                                                                                                                                                 >  2:1244719/1‑94
                                                                                                                                                                                                                                                                    TAGTGCCATAGTGCGGTTGGCGGTCTCAGCTCTGAACTATTTGAAAACCAAAACCTTGATTAAGGCTGTGCCTACCTTACGTTAGTTGGGG                                                                                                                                                                   >  2:2096123/1‑91
                                                                                                                                                                                                                                                                    TAGTGCCATAGTGCGGTTGGCGGTCTCAGCTCTGAACTATTTGAAAACCAAAACCTTGATTAAGGCTGTGCCTACCTTACGTTAGTTGGGG                                                                                                                                                                   <  1:2096123/91‑1
                                                                                                                                                                                                                                                                       TGCCATAGTGCGGTTGGCGGTCTCAGCTCTGAACTATTTGAAAACCAAAACCTTGATTAAGGCTGTGCCTACCTTACGTTAGTTGGGGCA                                                                                                                                                                 <  1:1009973/90‑1
                                                                                                                                                                                                                                                                        GCCATAGTGCGGTTGGCGGTCTCAGCTCTGAACTATTTGAAAACCAAAACCTTGATTAAGGCTGTGCCTACCTTACGTTAGTTGGGGCAGTATGTTATATAACCAAATTAGACGTCAGGGTTAC                                                                                                                              >  1:2159304/1‑124
                                                                                                                                                                                                                                                                        GCCATAGTGCGGTTGGCGGTCTCAGCTCTGAACTATTTGAAAACCAAAACCTTGATTAAGGCTGTGCCTACCTTACGTTAGTTGGGGCAGTATGTTATATAACCAAATTAGACGTCAGGGTTAC                                                                                                                              <  2:2159304/124‑1
                                                                                                                                                                                                                                                                         CCATAGTGCGGTTGGCGGTCTCAGCTCTGAACTATTTGAAAACCAAAACCTTGATTAAGGCTGTGCCTACCTTACGTTAGTTGGGGCAGTATGTTATATAACCAAATTAGACGTCAGGGTTACAATATTTGTGGAATCCTGAAAAGCTTGATACCTGCGACCGAGAATGGCTGTGAAGTATTTAGATCACTGGTGATGATGCAGTGATCCGATTGGACTGTGTCATAACATCTCCTTAA          >  1:1445501/1‑239
                                                                                                                                                                                                                                                                         CCATAGTGCGGTTGGCGGTCTCAGCTCTGAACTATTTGAAAACCAAAACCTTGATTAAGGCTGTGCCTACCTTACGTTAGTTGGGGCAGTATGTTATATAACCAAATTAGACGTCAGGGTTACAATATTTGTGGAATCCTGAAAAGCTTGATACCTGCGACCGAGAATGGCTGTGAAGTATTTAGATCACTGGTGATGATGCAGTGATCCGATTGGACTGTGT                          <  1:2021998/223‑1
                                                                                                                                                                                                                                                                         CCATAGTGCGGTTGGCGGTCTCAGCTCTGAACTATTTGAAAACCAAAACCTTGATTAAGGCTGTGCCTACCTTACGTTAGTTGGGGCAGTATGTTATATAACCAAATTAGACGTCAGGGTTACAATATTTGTGGAATCCTGAAAAGCTTGATACCTGCGACCGAGAATGGCTGTGAAGTATTTAGA                                                               >  2:447926/1‑186
                                                                                                                                                                                                                                                                         CCATAGTGCGGTTGGCGGTCTCAGCTCTGAACTATTTGAAAACCAAAACCTTGATTAAGGCTGTGCCTACCTTACGTTAGTTGGGGCA                                                                                                                                                                 >  2:2606824/1‑88
                                                                                                                                                                                                                                                                         CCATAGTGCGGTTGGCGGTCTCAGCTCTGAACTATTTGAAAACCAAAACCTTGATTAAGGCTGTGCCTACCTTACGTTAGTTGGGGCA                                                                                                                                                                 <  1:2252051/88‑1
                                                                                                                                                                                                                                                                         CCATAGTGCGGTTGGCGGTCTCAGCTCTGAACTATTTGAAAACCAAAACCTTGATTAAGGCTGTGCCTACCTTACGTTAGTTGGGGCA                                                                                                                                                                 >  2:2247893/1‑88
                                                                                                                                                                                                                                                                         CCATAGTGCGGTTGGCGGTCTCAGCTCTGAACTATTTGAAAACCAAAACCTTGATTAAGGCTGTGCCTACCTTACGTTAGTTGGGGCA                                                                                                                                                                 <  1:2606824/88‑1
                                                                                                                                                                                                                                                                         CCATAGTGCGGTTGGCGGTCTCAGCTCTGAACTATTTGAAAACCAAAACCTTGATTAAGGCTGTGCCTACCTTACGTTAGTTGGGG                                                                                                                                                                   <  2:1437141/86‑1
                                                                                                                                                                                                                                                                           ATAGTGCGGTTGGAGGTCTCAGCTCTGAACTATTTGAAAACCAAAACCTTGATTAAGGCTGTGCCTACCTTACGTTAGTTGGGGCAGTATGTTATATAACCAAATTAGACGTCAGGGTTACAATATTTGTGGAATCCTGAAAAGCTTGATACCTGCGACCGAGAATGGCTGTGAAGTATTTAGATCACTGGTGATGATGCAGTGATCCGATTGGACTG                             <  2:408537/218‑1
                                                                                                                                                                                                                                                                            TAGTGCGGTTGGCGGTCTCAGCTCTGAACTATTTGAAAACCAAAACCTTGATTAAGGCTGTGCCTACCTTACGTTAGTTGGGGCAGTATGTTATATAACCAAATTAGACGTCAGGGTTACAATATTTGTGGAATCCTGAAAAGCTTGATACCTGCGACCGAGAATGGCTGTGAAGTATTTAGATCACTGGTGATGATGCAGTGATCCGATTGGAC                               >  2:795496/1‑215
                                                                                                                                                                                                                                                                            TAGTGCGGTTGGCGGTCTCAGCTCTGAACTATTTGAAAACCAAAACCTTGATTAAGGCTGTGCCTACCTTACGTTAGTTGGGGCAGTATGTTATATAACCAAATTAGACGTCAGGGTTACAATATTTGTGGAATCCTGAAAAGCTTGATACCTGCGACCGAGAATGGCTGTGAAGTATTTAGATCACTGGTGATGATGCAGTGATCCGATTGGAC                               <  1:795496/215‑1
                                                                                                                                                                                                                                                                                 CGGTTGGCGGTCTCAGCTCTGAACTATTTGAAAACCAAAACCTTGATTAAGGCTGTGCCTACCTTACGTTAGTTGGGGCAGTATGTTATATAACCAAATTAGACGT                                                                                                                                       >  1:494817/1‑106
                                                                                                                                                                                                                                                                                 CGGTTGGCGGTCTCAGCTCTGAACTATTTGAAAACCAAAACCTTGATTAAGGCTGTGCCTACCTTACGTTAGTTGGGGCAGTATGTTATATAA                                                                                                                                                    >  2:1409035/1‑93
                                                                                                                                                                                                                                                                                 CGGTTGGCGGTCTCAGCTCTGAACTATTTGAAAACCAAAACCTTGATTAAGGCTGTGCCTACCTTACGTTAGTTGGGGCAGTATGTTATATAA                                                                                                                                                    <  1:1409035/93‑1
                                                                                                                                                                                                                                                                                 CGGTTGGCGGTCTCAGCTCTGAACTATTTGAAAACCAAAACCTTGATTAAGGCTGTGCCTACCTTACGTTAGTTGGGGCA                                                                                                                                                                 >  2:2310300/1‑80
                                                                                                                                                                                                                                                                                 CGGTTGGCGGTCTCAGCTCTGAACTATTTGAAAACCAAAACCTTGATTAAGGCTGTGCCTACCTTACGTTAGTTGGGGC                                                                                                                                                                  <  1:2445142/79‑1
                                                                                                                                                                                                                                                                                 CGGTTGGCGGTCTCAGCTCTGAACTATTTGAAAACCAAAACCTTGATTAAGGCTGTGCCTACCTTACGTTAGTTGGGGC                                                                                                                                                                  <  1:396393/79‑1
                                                                                                                                                                                                                                                                                 CGGTTGGCGGTCTCAGCTCTGAACTATTTGAAAACCAAAACCTTGATTAAGGCTGTGCCTACC                                                                                                                                                                                  >  2:490079/1‑63
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                
AGACAAGAAAAAATTCTACGTCGAAACAGAACGAGCAGAGAGCCCAAAACAAGCCATCATGATGAGCTATAAGGAGTGGGGTCCGGATGGGCAAGGCATCAACAATATAGAAAGCCATGAACACGCGATGTTGACATTGCTCAAAGAGCATCGAGATATGACCCTACCAACCAGGAAATAATGCGTGCAACTGTGTTTTATAATATCAAGTGTGATTACAATCGCTGGCGGTGCCATAGTGCCATAGTGCCATAGTGCCATAGTGCCATAGTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/2765693‑2765420
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgccatagtgccatagtgccatagtgccatagtgccatagtgcGGTTGGCGGTCTCAGCTCTGAACTATTTGAAAACCAAAACCTTGATTAAGGCTGTGCCTACCTTACGTTAGTTGGGGCAGTATGTTATATAACCAAATTAGACGTCAGGGTTACAATATTTGTGGAATCCTGAAAAGCTTGATACCTGCGACCGAGAATGGCTGTGAAGTATTTAGATCACTGGTGATGATGCAGTGATCCGATTGGACTGTGTCATAACATCTCCTTAATTTTCGCA  <  NC_000913/2765411‑2765174

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.