Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913540,5580TG26.0% 265.5 / 42.8 129intergenic (+50/‑7)allB/ybbYallantoinase/putative uracil/xanthine transporter
Reads supporting (aligned to +/- strand):  ref base T (21/73);  new base G (33/0);  total (56/73)
Fisher's exact test for biased strand distribution p-value = 1.63e-16
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 132 total aligned reads displayed.

AATAGCAGCTATGTTCTTACCAATGACGATCTGGAATATCGCCACAAAGTCAGCCCGTATGTTGGCCGTACCATTGGCGCGCGTATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTC‑CGGTTAAGGTGTGT‑TTATGTTCAATTTTGCAGTCAGCCGCGAAAG‑CCTG‑TTATCAGGATTTCAGTG‑GT‑TTTTCTTTATTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTA‑CTTTCTGCTTTTCAGTTGCCGCAAAGT‑AGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTCGCGCTATTATGGAAGGGCCAGGTGGCCTG  >  NC_000913/540326‑540795
                                                                                                                                                                                                                                         |                                                                                                                                                                                                                                                    
aaTAGCAGCTATGTTCTTACCAATGACGATCTGGAATATCGCCACAAAGTCAGCCCGTATGTTGGCCGTACCATTGGCGCGCGTATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGGATTCTC‑CCGTTTAGGTGGGt‑tt                                                                                                                                                                                                                                               >  1:117866/1‑239 (MQ=255)
             ttCTTACCAATGACGATCTGGAATATCGCCACAAAGTCAGCCCGTATGTTGGCCGTACCATTGGCGCGCGTATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTC‑CTGTTAAGGGGTGT‑TTTTGttt                                                                                                                                                                                                                                         >  1:2737022/1‑231 (MQ=255)
               cTTACCAATGACGATCTGGAATATCGCCACAAAGTCAGCCCGTATGTTGGCCGTACCATTGGCGCGCGTATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGGCTTTTCTCCGTTAGGGTGTTT‑TTTTTTTCTAtttgtt                                                                                                                                                                                                                                 >  2:1986158/1‑236 (MQ=255)
                 tACCAATGACGATCTGGAATATCGCCACAAAGTCAGCCCGTATGTTGGCCGTACCATTGGCGCGCGTATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACCGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCCATCTC‑CGGTTTACGTGTGT‑GTATGTTcgtattttcat                                                                                                                                                                                                                               >  2:281612/1‑228 (MQ=255)
                  aCCAATGACGATCTGGAATATCGCCACAAAGTCAGCCCGTATGTTGGCCGTACCATTGGCGCGCGTATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCGTTCAC‑CCGTTTAGG‑GTGTGTTACGTTCTATTTTTCAGTc                                                                                                                                                                                                                             >  2:1285153/1‑239 (MQ=255)
                  aCCAATGACGATCTGGAATATCGCCACAAAGTCAGCCCGTATGTTGGCCGTACCATTGGCGCGCGTATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCACTTTC‑CTGCTATGGTGTGt‑tt                                                                                                                                                                                                                                               >  2:690300/1‑221 (MQ=255)
                       tGACGATCTGGAATATCGCCACAAAGTCAGCCCGTATGTTGGCCGTACCATTGGCGCGCGTATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTC‑CGGTTAAGGGGTGT‑TTTTGTTCTATTTTGCAGTCAGcc                                                                                                                                                                                                                         >  1:228252/1‑238 (MQ=255)
                       tGACGATCTGGAATATCGCCACAAAGTCAGCCCGTATGTTGGCCGTACCATTGGCGCGCGTATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTC‑CCGGTTAGGGGTGT‑TTTTTTTTCATTTTTCAGTCAGcc                                                                                                                                                                                                                         >  1:455287/1‑238 (MQ=255)
                          cGATCTGGAATATCGCCACAAAGTCAGCCCGTATGTTGGCCGTACCATTGGCGCGCGTATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTC‑CGGTTAAGGTGTGT‑TTATGTTCAATTTTGCAGTCAGCCGCGa                                                                                                                                                                                                                     <  1:509262/239‑1 (MQ=255)
                           gATCTGGAATATCGCCACAAAGTCAGCCCGTATGTTGGCCGTACCATTGGCGCGCGTATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTC‑CGGTTAAGGTGTGT‑TTATGTTCAATTTTGCAGTCAGCCGCGaa                                                                                                                                                                                                                    <  1:1285153/239‑1 (MQ=255)
                           gATCTGGAATATCGCCACAAAGTCAGCCCGTATGTTGGCCGTACCATTGGCGCGCGTATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTC‑CGGTTAAGGTGTGT‑TTATGTTCAATTTTGCAGTCAGCCGCGaa                                                                                                                                                                                                                    <  1:1523542/239‑1 (MQ=255)
                            aTCTGGAATATCGCCACAAAGTCAGCCCGTATGTTGGCCGTACCATTGGCGCGCGTATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTC‑CGGTTAAGGGGGGT‑TTATTTTCAATTTTTTAGTCCACCGCGcaa                                                                                                                                                                                                                   >  1:1109060/1‑239 (MQ=255)
                                  aaTGTCGCCACAAAGTCAGCCCTGATGTTGGCGTTCCCATGGGCGCAGGTATCACGAAGACCATCGTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTC‑CGGTTAAGGTGTGT‑TTATGTTCAATTTTGCAGTCAGCCGCGAAAG‑c                                                                                                                                                                                                                <  2:1969421/235‑1 (MQ=255)
                                  aaTAGCGCCCGAAAGTCAGCCCCTATGTTTGCCGTACCATTGGCCCGCGTATCACGAAAACCATCTTACGTGGTGATGTGATTTACGAACTTGAACAGGGCTTACCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCCTTCTC‑CGGTTAAGGTGTGT‑TTATGTTCAATTTTGCAGTCAGCCGCGAAAG‑CCTg                                                                                                                                                                                                             <  2:51183/238‑1 (MQ=255)
                                      tCGCCACAAAGTCAGCCCGTATGTTGGCCGTACCATTGGCGCGCGTATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATACTC‑CGGTTAAGGGGTGT‑TTTTTTTCTCTTTTGCAGTCTGCCGCGGCAG‑CCTG‑ttgt                                                                                                                                                                                                        >  2:1626937/1‑236 (MQ=255)
                                       cGCCACAAAGTCAGCCCGTATGTTGGCCGTACCATTGGCGCGCGTATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCCTTCTT‑CGGTTAAGGGGTGG‑TTATGTTCACTTTTGTCTGCAGCCGCGAAAG‑ACttgtattt                                                                                                                                                                                                       >  2:1592508/1‑232 (MQ=255)
                                         ccACAAAGTCAGCCCGTATGTTGGCCGTACCATTGGCGCGCGTATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTC‑CGGTTTAGGTGTGG‑TTTTGTTCAATTTTGCAGTCAGCCGCGGAAG‑GCTG‑TTTTCAgg                                                                                                                                                                                                    >  1:865248/1‑239 (MQ=255)
                                              aaGTCAGCCCGTATGTTGGCCGTACCATTGGCGCGCGTATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTC‑CGGTTTAGGTGTGT‑TTATGTTCAATTTTGCCGTCAGCCGCGAAAG‑CCTG‑TTATCAGGAtttt                                                                                                                                                                                               >  1:2226329/1‑238 (MQ=255)
                                                                   gTACCATTGGCGCGCGTATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTTTC‑CGGGTAAGGGGTGT‑TTTTGTTCCATTTTTCAGTCAGCCGCGGAAG‑CCTG‑TTATCAGGGTTTCTGGG‑GG‑TTTTCTTTAtttttt                                                                                                                                                                        >  1:867700/1‑239 (MQ=255)
                                                                    tACCATTGGCGCGCGTATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCTGCGGCCCTTCTC‑CGGTTCAGGTGTGT‑TTATGTTTCATTTTTCAGTCCGCCGCGCAAG‑CCTG‑TTATATAGATTTCAGGG‑GT‑TTTTTTTTAttttttt                                                                                                                                                                       >  2:1342714/1‑238 (MQ=255)
                                                                    tACCATTGGCGCGCGTATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTC‑CGGTTTAGGTGTGT‑TTTTTTTCTATTTTTCAGGCCGCCGCGAAAG‑CCTG‑TTATCAGGATTTCAGTG‑GG‑TTTTCtttttttttt                                                                                                                                                                        >  1:614688/1‑238 (MQ=255)
                                                                    tACCATTGGCGCGCGTATCACGAAAACCATCTTACGTGGTGATGCGATTTACGACATTGAACAGAGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCCTTCTC‑CCGCTTATGAGGGG‑TTATTGTCAATTTTGCAGTTGGCCGCGGAAG‑CCTG‑GTGTCAGGGTTTTAGTG‑GG‑TTTTCTTTATTTTTTg                                                                                                                                                                       >  2:2120077/1‑239 (MQ=255)
                                                                      ccATTGGCGCGCGTATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTC‑CGGTTAAGGTGTGT‑TTATGTTCAATTTTGCAGTCAGCCGCGAAAG‑CCTG‑TTATCAGGATTTCAGTG‑GT‑TTTTCTTTAtttt                                                                                                                                                                          <  1:2663470/234‑1 (MQ=255)
                                                                       cATTGGCGCGCGTATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTC‑CGGTTAAGGTGTGT‑TTATGTTCAATTTTGCAGTCAGCCGCGAAAG‑CCTG‑TTATCAGGATTTCAGTG‑GT‑TTTTCTTTAtt                                                                                                                                                                            <  1:511547/231‑1 (MQ=255)
                                                                         ttGGCGCGCGTATCACGAAAACCATCTTACGTGGTGATGTGA‑TTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTC‑CGGTTAAGGTGTGT‑TTATGTTCAATTTTGCAGTCAGCCGCGAAAG‑CCTG‑TTATCAGGATTTCAGTG‑GT‑TTTTCTTTATTTTTTGCAacac                                                                                                                                                                 <  1:1834260/239‑1 (MQ=255)
                                                                              gcgcgTATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTC‑CGGTTAAGGTGTGT‑TTATGTTCAATTTTGCAGTCAGCCGCGAAAG‑CCTG‑TTATCAGGATTTCAGTG‑GT‑TTTTCTTTATTTTTTGCAACACGGtt                                                                                                                                                             <  1:1882667/239‑1 (MQ=255)
                                                                                 cgTATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCCTTTTC‑CCGTTAAGGGGTGT‑TTTTGTTCAATTTTTCTGTGCGCCGCGCAAGACCTG‑‑TATTAGGATTTTTGTG‑GT‑TTTTTTTTTTTTTTTTCAacacactta                                                                                                                                                            >  2:511547/1‑232 (MQ=255)
                                                                                    aTCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTC‑CGGTTAAGGTGTGT‑TTATGTTCAATTTTGCAGTCAGCCGCGAAAG‑CCTG‑TTATCAGGATTTCAGTG‑GT‑TTTTCTTTATTTTTTGCAACACGGTTGTGGt                                                                                                                                                        <  2:48144/238‑1 (MQ=255)
                                                                                      ctagAAAACCAACTCACGTGGGTATTTGATTTACGACATTGAACCGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTC‑CGGTTAAGGTGTGT‑TTATGTTCAATTTTGCAGTCAGCCGCGAAAG‑CCTG‑TTATCAGGATTTCAGTG‑GT‑TTTTCTTTATTTTTTGCAACACGGTTGTGGTtcc                                                                                                                                                     <  2:2239104/236‑1 (MQ=255)
                                                                                             aCCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTC‑CGGTTAAGGTGTGT‑TTATGTTCAATTTTGCAGTCAGCCGCGAAAG‑CCTG‑TTATCAGGATTTCAGTG‑GT‑TTTTCTTTATTTTTTGCAACACGGTTGTGGTTCCTCCTACg                                                                                                                                              <  1:132916/239‑1 (MQ=255)
                                                                                             aCCAGCTTACGTGGATATGGTATTTACGACATTGAACAGGGCTGCCGTGTTGCGCCGAAAGGTCAATTTAGCCTTAAGCATCAGCAGTAATGTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCAGTAGA‑CGGTTAAGGTGTGT‑TTATGTTCAATTTTGCAGTCAGCCTCGAAAG‑CCTG‑TTATCGGGATTTCAGTG‑GT‑TTTTCTTTATTTTTTGCAACACGGTTGTGGTTCCTCCTACg                                                                                                                                              <  2:646707/239‑1 (MQ=255)
                                                                                               cATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTC‑CGGTTAAGGTGTGT‑TTATGTTCAATTTTGCAGTCAGCCGCGAAAG‑CCTG‑TTATCAGGATTTCAGTG‑GT‑TTTTCTTTATTTTTTGCAaca                                                                                                                                                                  <  1:2383151/217‑1 (MQ=255)
                                                                                                  cTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTC‑CGGTTAAGGTGTGT‑TTATGTTCAATTTTGCAGTCAGCCGCGAAAG‑CCTG‑TTATCAGGATTTCAGTG‑GT‑TTTTCTTTATTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTA‑Ct                                                                                                                                        <  1:281612/239‑1 (MQ=255)
                                                                                                         ggtgCTGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTC‑CGGTTACTGGGTGG‑TTTTTTTATATTTTTCCGTCAGCCCCGAGAT‑ACTG‑TTTTGCAGATTTTACGG‑GTCTTTTCTTT‑TTTTTTGTCAAACCGTGTTGGGTCCTTCTACGCtcttttttg                                                                                                                                    >  2:2206709/1‑229 (MQ=255)
                                                                                                           tgatgtgatTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTC‑CGGTTAAGGTGTGT‑TTATGTTCAATTTTGCAGTCAGCCGCGAAAG‑CCTG‑TTATCAGGATTTCAGTG‑GT‑TTTTCTTTATTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTA‑Cttt                                                                                                                                      <  1:1539131/232‑1 (MQ=255)
                                                                                                             atgtgatTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTTTC‑CGGTTTAGGGGGGG‑TTATTTTTAATTTTGCAGTCAGGCGCGACAA‑GCTG‑TTCTTAGGGTTTTAGTG‑GT‑GTTTCTTTATTTTTTGTAACACGGTTGGGGTTCCTGCTTCGCCA‑CTTTCTTCTTTTc                                                                                                                             >  2:1475242/1‑239 (MQ=255)
                                                                                                             atgtgatTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTC‑CCGTTAAGGGGTGT‑TTATTTTCTATTTTTCCGTCAGCCCCCGAAG‑CCTGTTTTTCAGGTTTTC‑GTG‑GT‑TTTTTTTTTTTTTTTTCACAACCGTTGTGGTGTCTCCTTCCCGT‑CTTTCTTCgtttt                                                                                                                             >  2:1352787/1‑238 (MQ=255)
                                                                                                                    ttAAGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTC‑CGGTTAAGGTGTGT‑TTATGTTCAATTTTGCAGTCAGCCGCGAAAG‑CCTG‑TTATCAGGATTTCAGTG‑GT‑TTTTCTTTATTTTTTGCAACACGGTTGTGGTTCCTCCGACGCTA‑CTTTCTGCTTTTCAGTTGcc                                                                                                                      <  2:832590/239‑1 (MQ=255)
                                                                                                                     tACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTACTCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTC‑CGGGTAAGGTGTGT‑TTTTTTTCAATTTTGCGGTCAGCCCCCAAAG‑CCGC‑TTTTTCTGGTTTTAGGG‑GG‑TTTTTTTTTTTTTTTGCACCACCGGATTGGTTGCTCCGTCGCTT‑CCTTCTCCtttttg                                                                                                                            >  2:1539131/1‑230 (MQ=255)
                                                                                                                            ttGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTC‑CGGTTAAGGTGTGT‑TTATGTTCAATTTTGCAGTCAGCCGCGAAAG‑CCTG‑TTATCAGGATTTCAGTG‑GT‑TTTTCTTTATTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTA‑CTTTCTGCTTTTCAGTTGCCGCAAAGT‑a                                                                                                             <  1:687079/239‑1 (MQ=255)
                                                                                                                              gAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTC‑CGGTTAAGGTGTGT‑TTATGTTCAATTTTGCAGTCAGCCGCGAAAG‑CCTG‑TTATCAGGATTTCAGTG‑GT‑TTTTCTTTATTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTA‑CTTTCTGCTTTTCAGTTGCCGCAAAGT‑AGc                                                                                                           <  1:2314148/239‑1 (MQ=255)
                                                                                                                              gAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTC‑CGGTTAAGGTGTGT‑TTATGTTCAATTTTGCAGTCAGCCGCGAAAG‑CCTG‑TTATCAGGATTTCAGTG‑GT‑TTTTCTTTATTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTA‑CTTTCTGCTCTTCAGTTGCCGCAAAGT‑AGc                                                                                                           <  1:1905960/239‑1 (MQ=255)
                                                                                                                               aaCAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTC‑CGGTTAAGGTGTGT‑TTATGTTCAATTTTGCAGTCAGCCGCGAAAG‑CCTG‑TTATCAGGATTTCAGTG‑GT‑TTTTCTTTATTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTA‑Cttt                                                                                                                                      <  1:1662035/212‑1 (MQ=255)
                                                                                                                                    ggCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCATCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTC‑CGGTTAAGGTGTGT‑TTATGTTCAATTTTGCAGTCAGCCGCGAAAG‑c                                                                                                                                                                                                                <  1:648574/137‑1 (MQ=255)
                                                                                                                                    ggCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTC‑CGGTTAAGGTGTGT‑TTATGTTCAATTTTGCAGTCAGCCGCGAAAG‑CCTG‑TTATCAGGATTTCAGTG‑GT‑TTTTCTTTATTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTA‑CTTTCTGCTTTTCAGt                                                                                                                          <  1:2033128/219‑1 (MQ=255)
                                                                                                                                    ggCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTC‑CGGTTAAGGGGTGT‑TTATGTTCAATTTTTCAGTCAGCCGCGACAG‑CCTG‑TTATCAGGATTTCAGTT‑GG‑TTTTCTTTATTTTTTGCAACACGGTTGTTGTTCCTCCTTCGCCA‑CTTTCCGCTTTTTAGTTCTCGCAAAGT‑Agcttgctt                                                                                                     >  2:1123959/1‑239 (MQ=255)
                                                                                                                                    ggCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTC‑CGGTTAAGGGGGGT‑TTTTGTTCTATTTTTCAGTCAGCCGCGAAAG‑CCCG‑TTTTTAGGCTTTTTGTG‑GT‑TTTTTTTTTTTTTTTGTATCACGGTTTTGTGTTCTCCTCCGCTC‑TTTTTTGCTTTTTAGTTTCCTCAAATT‑AGCCTGCtt                                                                                                     >  2:85750/1‑239 (MQ=255)
                                                                                                                                    ggCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCAATCTC‑CGGGTAAGGTGTGT‑TTATGTTTAATTTTTCAGTCAGCCGCGAAAA‑CCTG‑TTATAAGGGTTTTTGTG‑GT‑TTTTTTTTTTTTTTTTGTACACGGTTGTGGTTCCTCCTACACTT‑CTTTTTTCCTTTTTGTTGCCGCcaaatta                                                                                                             >  2:1847826/1‑228 (MQ=255)
                                                                                                                                     gCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCTTTAATCTGGCCCCTGCAATGCCCGTCCGTGCGGCGGGCATTCTC‑CGGTTAAGGTGTGT‑TTATTTTCAATTTTGCAGTCAGCCGCGAAAG‑CCTG‑TTATCAGGATTTCAGTG‑GT‑TTTTCTTTATTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTA‑CTTTCTGCTTTTCAGTTGCCGCAAAGT‑AGCCTGCt                                                                                                      <  2:2616570/237‑1 (MQ=255)
                                                                                                                                         cccTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTC‑CGGTTAAGGTGTGT‑TTATGTTCAATTTTGCAGTCAGCcgcg                                                                                                                                                                                                                      >  1:1191628/1‑127 (MQ=255)
                                                                                                                                         cccTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTC‑CGGGTTAGGGGTGT‑TTATGTTTCATTTTTCAGTTAACCCCGCAAA‑CCTG‑TTATCAGGGTATCTGTG‑GT‑TTTTTTTTTTTTTTTGTGACACGGGTGTGGGTTCTCCTACGCTT‑CTTTCTTCtttttt                                                                                                                            >  2:1662035/1‑210 (MQ=255)
                                                                                                                                          ccTGGTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCATTAATCTGGCCCCTGCAGTGCCCGTCCTTGCGGCGGGCATTCTC‑CGGTTAAGGTGTGT‑TTATGTTCAATTTTGCAGTCAGCCGCGAAAG‑CCTG‑TTATCATGATTTCAGTG‑GT‑TTTTCTTTATTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTA‑CTTTCTGCTTTTCAGTGGCCGCAAAGT‑AGGCTACTTACGCTc                                                                                               <  2:316899/239‑1 (MQ=255)
                                                                                                                                               tGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTC‑CGGTTAAGGTGTGT‑TTATGTTCAATTTTGCAGTCAGCCGCGAAAG‑CCTG‑TTATCAGGATTTCAGTG‑GT‑TTTTCTTTATTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTA‑CTTTCTGCTTTTCAGTTGCCGCAAAGT‑AGCCTGCTTACGCTCACGCa                                                                                          <  1:568471/239‑1 (MQ=255)
                                                                                                                                                            cAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTC‑CGGTTAAGGTGTGT‑TTATGTTCAATTTTGCAGTCAGCCGCGAAAG‑CCTG‑TTATCAGGATTTCAGTG‑GT‑TTTTCTTTATTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTA‑CTTTCTGCTTTTCAGTTGCCGCAAAGT‑AGCCTGCTTACGCTCACGCAATATGCTTTTCt                                                                              <  1:2210913/238‑1 (MQ=255)
                                                                                                                                                                    ccTTAAACATCAGCAGTAATCTGGCCCCTGCAAAGCCCGCCCTTGCGGCGGTCAATATG‑GCGTTGAAGGCTGT‑TTTTGGTCAATTTTGCTATCAGCCTCGGAAG‑CCTG‑CTATGAGGGTTTCAGTGTGT‑TTTTTTTTTTTTTTTCAAACA‑GGTTTGGGGTCCTCCTACGCTATTTTTCTGCTTTT‑ATTTGCCGCCACAT‑AGTCCGCTTACGCTCAAGCAACATGCTTTTCTTTCCACCGc                                                                     >  2:2276939/1‑239 (MQ=255)
                                                                                                                                                                     cTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGGCTTCTC‑CGGTTAAGGGGGGT‑TTTAGTTCAATTTTGCAGTCAGCCGCGGAAG‑CCTG‑TTATCTGGATTTTTGGG‑GG‑TTTTTTTTTTTTTTTTCAACACGGTTTTGGGTCCCTCTTCCGTA‑CTTTCTTCTTTTTTTGTGTCTCCAAGT‑AGGCTTCTTTCGCTCACACTATTTGTTTTTCTTTCTccccc                                                                     >  2:587803/1‑236 (MQ=255)
                                                                                                                                                                     cTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTC‑CGGTTAAGGTGTGT‑TTATGTTCAATTTTGCAGTCAGCCGCGAAAG‑CCTG‑TTATCAGGATTTCAGTG‑GT‑TTTTCTTTATTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTA‑CTTTCTGCTTTTCAGTTGCCGCAAAGT‑AGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCa                                                                    <  1:346446/239‑1 (MQ=255)
                                                                                                                                                                     cTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTC‑CGGTTAAGGTGTGT‑TTATGTTCAATTTTGCAGGCAGCCGCGAAAG‑CCTG‑TTATCAGGATTTCAGTG‑GT‑TTTTCTTTATTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTA‑CTTTCTGCTTTTCAGTTGCCGCAAAGT‑AGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCa                                                                    <  2:1518044/239‑1 (MQ=255)
                                                                                                                                                                        aaaCATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTC‑CGGTTAAGGTGTGT‑TTATGTTCAATTTTGCAGTCAGCCGCGaa                                                                                                                                                                                                                    >  1:871296/1‑98 (MQ=255)
                                                                                                                                                                        aaaCATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTC‑CGGTTAAGGTGTGT‑TTATGTTCAATTTTGCAGTCAGCCGCGaa                                                                                                                                                                                                                    <  2:871296/98‑1 (MQ=255)
                                                                                                                                                                                 cagTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTC‑CGGTTAAGGTGTGT‑TTATGTTCAATTTTGCAGTCAGCCGCGAAAG‑CCTG‑TTATCAGGATTTCAGTG‑GT‑TTTTCTTTATTTTTTGCAACACGGTTGTGGTTCCTCCTACg                                                                                                                                              <  1:1916782/155‑1 (MQ=255)
                                                                                                                                                                                 cagTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTC‑CGGTTAAGGTGTGT‑TTATGTTCAATTTTGCAGTCAGCCGCGAAAG‑CCTG‑TTATCAGGATTTCAGTG‑GT‑TTTTCTTTATTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTA‑CTTTCTGCTTTTCAGTTGCCGCAAAGT‑AGCCTGCTTACGCTCACGCa                                                                                          <  1:2083936/205‑1 (MQ=255)
                                                                                                                                                                                     aaTCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTC‑CGGTTAAGGTGTGT‑TTATGTTCAATTTTGCAGTCAGCCGCGAAAG‑CCTG‑TTATCAGGATTTCAGTG‑GT‑TTTTCTTTATTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTA‑CTTTCTGCTTTTCAGTTGCCGCAAAGT‑AGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTc                                                    <  1:993043/239‑1 (MQ=255)
                                                                                                                                                                                      aTCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTC‑CGGTTAAGGTGTGT‑TTATGTTCAATTTTGCAGTCAGCCGCGAAAG‑CCTG‑TTATCAGGATTTCAGTG‑GT‑TTTTCt                                                                                                                                                                                 <  1:2741970/115‑1 (MQ=255)
                                                                                                                                                                                         tGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTC‑CGGTTAAGGTGTGT‑TTATGTTCAATTTTGCAGTCAGCCGCGAAAG‑CCTG‑TTATCAGGATTTCAGTG‑GT‑TTTTCTTTATTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTA‑CTTTCTGCTTTTCAGTTGCCGCAAAGT‑AGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAGGc                                                <  1:339416/239‑1 (MQ=255)
                                                                                                                                                                                           gCCCCTGCAATGCCCGTCCTTGCGGCGGGGATTCTC‑CGGGTAAGGGGGGT‑TTTTGTTCAATTTTGCAGTCAGGCGCGAAAA‑CCCG‑GTATCAGGGTTTCCGTG‑GT‑TTTTTTTTTTTTTTTGTAACACGGTTGTGGTTCCTCCTACGCTA‑CTTTCTGTTTTTTAGTTGCCGCAAAGT‑AGCCTGCCTCAGATCACGCCATATTATTTTTTTGCTTCCCCACCAGCCTTCCTCGCTCATGCGt                                              >  2:1760145/1‑239 (MQ=255)
                                                                                                                                                                                           gCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTTTC‑CGGTTAAGGGGGGT‑TTTTGGTCAATTTTGCCGGCCGCCGCGGCAG‑CCCG‑TTTTCAGGGTTTTTGTT‑GT‑TTTTTTTTTTTTTTTTTAAAACGGTTTGGGGTCCTCCTTTCCTA‑Ctttttt                                                                                                                                   >  2:1916782/1‑152 (MQ=255)
                                                                                                                                                                                           gCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTC‑CGGTTAAGGTGTGT‑TTATGtt                                                                                                                                                                                                                                          <  2:1268087/57‑1 (MQ=255)
                                                                                                                                                                                           gCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTC‑CGGTTAAGGGGTGT‑TTATGtt                                                                                                                                                                                                                                          >  1:1268087/1‑57 (MQ=255)
                                                                                                                                                                                              ccTGCAATGCCCGTCCTTGCGGCGGGCATTCTC‑CGGTTAAGGTGTGT‑TTATGTTCAATTTTGCAGTCAGCCGCGAAAG‑CCTG‑TTATCAGGATTTCAGTG‑GT‑TTTTCTTTATTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTA‑CTTTCTGCTTTTCAGTTGCCGCAAAGT‑AGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAGGCGtttt                                           <  1:1592508/239‑1 (MQ=255)
                                                                                                                                                                                              ccTGCAATGCCCGTCCTTGCGGCGGGCATTCCC‑CGGTTTAGGTGTGT‑TTTTGTTCAATTTTTTAGGCAGCCGCGAACG‑CCTG‑TTTTCTGGGGTTTAGTG‑GT‑TTTTCTTTTTTTTTTGCAAGACTGTTGTTGTTCCTTCTACGCTT‑CCTTTTTCTTTTCCGTTGTCGCCAAGTAAGCCGCCTTA‑TCTCACGCCATCTGCTTTTCTTGCTACCTCTCCGGACTGCTTCTCTCAg                                                  >  2:1309714/1‑232 (MQ=255)
                                                                                                                                                                                                tGCAATGCCCGTCCTTGCGGCGGGGATTCTC‑CGGTTAAGGTGTGT‑TTTTGTTCAATTTTTCAGTCAGCCGCGAAAG‑CCTG‑TTTTTAGGGTTTTAGTG‑GT‑TTTTTTTTTTTTTTTTCAACACGGGTGTGGTTTCTCCTACGCTA‑CTTTCtt                                                                                                                                   >  2:1558417/1‑149 (MQ=255)
                                                                                                                                                                                                tGCAATGCCCGTCCTTGCGGCGGGGATTCTC‑CGGTTAAGGGGGGT‑TTTTGTTCAATTTTGCAGGCAGCCGCGAAAA‑CCTG‑TTTTCCGGGTTTCTGTG‑Gt‑tttttttttttttttt                                                                                                                                                                       >  2:2741970/1‑114 (MQ=255)
                                                                                                                                                                                                tGCAATGCCCGTCCTTGCGGCGGGCATTCTC‑CGGTTTAGGGGTGT‑TTTTTTTCCATTTTTCAGTCAGCCCCGCAAG‑CCTG‑TTATCAGGGTTTTAGTG‑GG‑TTTTTTTTTTTTTTTTCAACACGGTTGTGGTTTCTCCTACGCTA‑CTTTCTGCTTTTTCTTTGCCGCACAGT‑AGCCTGCTTTTGCTCACGCCATATGCTTTTCTTTCTTCCCCACTGTCCTTCTTCGCTCCTGCGTTTTgt                                         >  2:1260987/1‑238 (MQ=255)
                                                                                                                                                                                                tGCAATGCCCGTCCTTGCGGCGGGCATTCTC‑CGGTTAAGGTGTGT‑TTATGTTCAATTTTGCAGTCAGCCGCGAAAG‑CCTG‑TTATCAGGATTTCAGTG‑GT‑TTTTCTTTATTTTTTGCAACACGGTTGTGGt                                                                                                                                                        <  2:849435/130‑1 (MQ=255)
                                                                                                                                                                                                 gCAATGCCCGTCCTTGCGGCGGGCATTCTC‑CGGTTAAGGTGTGT‑TTATGTTCAATTTTGCAGTCAGCCGCGAAAG‑CCTG‑TTATCAGGATTTCAGTG‑GT‑TTTTCTTTATTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTA‑Cttt                                                                                                                                      <  1:1800740/146‑1 (MQ=255)
                                                                                                                                                                                                 gCAATGCCCGTCCTTGCGGCGGGCATTCTC‑CGGTTAAGGTGTGT‑TTATGTTCAATTTTGCAGTCAGCCGCGAAAG‑CCTG‑TTATCAGGATTTCAGTG‑GT‑TTTTCTTTATTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTA‑CTTTCTGCTTTTCAGTTGCCGCAAAGT‑AGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCg                                        <  1:842617/239‑1 (MQ=255)
                                                                                                                                                                                                     tGCCCGTCCTTGCGGCGGGGATTTTC‑CGGGTAAGGGGTGT‑TTATGTTCAATTTTGCAGGCAGCCGCGAAAG‑CCTG‑TTTTTAGGGTTTCAGTG‑GT‑TTTTTTTTTTTTTTTGCAACACGGTTGTGGTTCCTCTTCAGCGA‑CTTTTTGTTTTTTATTTGCCGCAAAGG‑AGCCTGTGCACGCTCACGCAATATGCTTTTTCTTCTTCAGCACTGGACTGCTTCGCTCTGGCGCTTTTAGGTCa                                    >  2:790572/1‑239 (MQ=255)
                                                                                                                                                                                                          gTCCTTGCGGCGGGCATTCTC‑CGGGTAAGGGGGGT‑TTTTGTTTCATTTTTCAGTCAGCCGCGAAAG‑CCTG‑TTTTCAGGATTTCAGTG‑GT‑TTTTCTTTTTTTTTTGCAACACGGTTGTGGTTTCTCCTACg                                                                                                                                              >  1:849435/1‑130 (MQ=255)
                                                                                                                                                                                                           tCCTTGCGGCGGGCATTCTC‑CGGTTAAGGGGGGT‑TTTTGTTTAATTTTTCAGGCAGCCGCGAAAA‑CCTG‑TTTTTAGGGTTTCAGTG‑GG‑TTTTTTTTATTTTTTGCAAAACGGTTGTGGTTCCTCCTACGCCA‑CTTTCTTCtttttt                                                                                                                            >  2:1800740/1‑144 (MQ=255)
                                                                                                                                                                                                            ccTTGCGGCGGGCATTCTC‑CGGTTAAGGTTTGT‑TTATGTTCAATTTTGCAGTCAGCCGCGAAAG‑CCTG‑TTATCAGGATTTCAGTG‑GT‑TTTTCTTTATTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTA‑CTTTCTGCTTTTCAGTTGCCGCAAAGT‑AGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCAtcgtcg                              <  2:2439781/238‑1 (MQ=255)
                                                                                                                                                                                                            ccTTGCGGCGGGCATTCTC‑CGGTTAAGGTGTGT‑TTATGTTCAATTTTGCAGTCAGCCGCGAAAG‑CCTG‑TTATCAGGATTTCAGTG‑GT‑TTTTCTTTATTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTA‑CTTTCTGCTTTTCAGTTGCCGCAAAGT‑AGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCAtcgtcg                              <  1:2276939/238‑1 (MQ=255)
                                                                                                                                                                                                             cTTGCGGCGGGCATTCTC‑CGGTTAAGGTGTGT‑TTATGTTCAATTTTGCAGTCAGCCGCGAAAG‑CCTG‑TTATCAGGATTTCAGTG‑GT‑TTTTCTTTATTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTA‑CTTTCTGCTTTTCAGTTGCCGCAAAGT‑AGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTcgcg                            <  1:1123959/239‑1 (MQ=255)
                                                                                                                                                                                                             cTTGCGGCGGGCATTCTC‑CGGTTAAGGTGTGT‑TTATGTTCAATTTTGCAGTCAGCCGCGAAAG‑CCTG‑TTATCAGGATTTCAGTG‑GT‑TTTTCTTTATTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTA‑CTTTCTGCTTTTCAGTTGCCGCAAAGT‑AGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTcgcg                            <  2:614688/239‑1 (MQ=255)
                                                                                                                                                                                                             cTTGCGGCGGGCATTCTC‑CGGTTAAGGTGTGT‑TTATGTTCAATTTTGCAGTCAGCCGCGAAAG‑CCTG‑TTATCAGGATTTCAGTG‑GT‑TTTTCTTTATTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTA‑CTTTCTGCTTTTCAGTTGCCGCAAAGT‑AGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTcgcg                            <  1:2120077/239‑1 (MQ=255)
                                                                                                                                                                                                             cTTGCGGCGGGCATTCTC‑CGGTTAAGGTGTGT‑TTATGTTCAATTTTGCAGTCAGCCGCGAAAG‑CCTG‑TTATCAGGATTTCAGTG‑GT‑TTTTCTTTATTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTA‑CTTTCTGCTTTTCAGTTGCCGCAAAGT‑AGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTcgcg                            <  2:455287/239‑1 (MQ=255)
                                                                                                                                                                                                             cTTGCGGCGGGCATTCGC‑CGGTTAAGGTGTGT‑TTATGTTCAATTTTGCAGTCAGCCGCGAAAG‑CCTG‑TTATCAGGATTTCAGTG‑GT‑TTTTCTTTATTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTA‑CTTTCTGCTTTTCAGTTGCCGCAAAGT‑AGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTcgcg                            <  2:2677418/239‑1 (MQ=255)
                                                                                                                                                                                                             cTTGCCGCTGGCATTCAC‑CGTTGGAGGTTTGT‑TTAGGTTCAATTTTGCAGTCAGCCGCGGAAG‑CCTG‑GTGTCAGGATTACAGTG‑GT‑TTTTCTTTATATTGTGCAACACGGTTATGTGTCCTCCTACGCTG‑CTGGCTGCTTTTCAGTTCCCGCAGATT‑AGCCGGCTGACGCTCACGCAATATGCTTCTCTGGCTACCGCACTGGCCAGCATCGCGCAGGCGTATTGCGACCATCGTcgcg                            <  2:514735/239‑1 (MQ=255)
                                                                                                                                                                                                                       gCATTCTC‑CGGTTAAGGTGTGT‑TTATGTTCAATTTTGCAGTCAGCCGCGAAAG‑CCTG‑TTATCAGGATTTCAGTG‑GT‑TTTTCTTTATTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTA‑CTTTCTGCTTTTCAGTTGCCGCAAAGT‑AGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCCCTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTCGCGCTATTATgg                   <  1:2571112/238‑1 (MQ=255)
                                                                                                                                                                                                                       gCATTCTC‑AGGTTAAGTTGTGT‑TTATGTTCAATTTTGCAGTCAGCCGCGAAAG‑CCTG‑TTATCAGGATTTCAGTG‑GT‑TTTTCTTTATTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTC‑CTTTCTGCTTTTCAGTTGCCGCAAAGT‑AGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTCGCGCTATTATgg                   <  2:38619/238‑1 (MQ=255)
                                                                                                                                                                                                                        cATTCTC‑CGGTTAAGGTGTGT‑TTATGTTCAATTTTGCAGTCAGCCGCGAAAG‑CCTG‑TTATCAGGATTTCAGTG‑GT‑TTTTCTTTATTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTA‑CTTTCTGCTTTTCAGTTGCCGCAAAGT‑AGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTCGCGCTATTATGGa                  <  1:852071/238‑1 (MQ=255)
                                                                                                                                                                                                                        cATTCTC‑CGGTTAAGGTGTGT‑TTATGTTCAATTTTGCAGTCAGCCGCGAAAG‑CCTG‑TTATCAGGATTTCAGTG‑GT‑TTTTCTTTATTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTA‑CTTTCTGCTTTTCAGTTGCCGCAAAGT‑AGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTCGCGCTATTATGGa                  <  2:1109060/238‑1 (MQ=255)
                                                                                                                                                                                                                                 ggTTAAGGTGTGT‑TTATGTTCAATTTTGCAGTCAGCCGCGAAAG‑CCTG‑TTATCAGGATTTCAGTG‑GT‑TTTTCTTTATTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTA‑CTTTCTGCTTTTCAGTTGCCGCAAAGT‑AGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTCGCGCTATTATGGAAGGGCCAgg         <  1:2206709/239‑1 (MQ=255)
                                                                                                                                                                                                                                     aaGGTTTGT‑TTATGTTCAATTTTGCAGTCAGCCGCGAAAG‑CCTG‑TTATCAGGATTTCAGTG‑TT‑TTTTCTTTATTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTA‑CTTTCTGCTTTTCAGTTGCCGCAAAGT‑AGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTCGCGCTATTATGGAAGGGCCAGGTGGc     <  2:1645854/239‑1 (MQ=255)
                                                                                                                                                                                                                                     aaGGTGTGT‑TTATGTTCAATTTTGCAGTCAGCCGCGAAAG‑CCTG‑TTATCAGGATTTCAGTG‑GT‑TTTTCTTTATTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTA‑CTTTCTGCTTTTCAGTTGCCGCAAAGT‑AGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTCGCGCTATTATGGAAGGGCCAGGTgg      >  1:2513324/1‑238 (MQ=255)
                                                                                                                                                                                                                                     aaGGTGTGT‑TTATGTTCAATTTTGCAGTCAGCCGCGAAAG‑CCTG‑TTATCAGGATTTCAGTG‑GT‑TTTTCTTTATTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTA‑CTTTCTGCTTTTCAGTTGCCGCAAAGT‑AGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTCGCGCTATTATGGAAGGGCCAGGTGGc     <  1:1590877/239‑1 (MQ=255)
                                                                                                                                                                                                                                      aGGTGTGT‑TTATGTTCAATTTTGCAGTCAGCCGCGAAAG‑CCTG‑TTATCAGGATTTCAGTG‑GT‑TTTTCTTTATTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTA‑CTTTCTGCTTTTCAGTTGCCGCAAAGT‑AGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTCGCGCta                         <  1:1605004/218‑1 (MQ=255)
                                                                                                                                                                                                                                        gtgtgt‑TTATGTTCAATTTTGCAGTCAGCCGCGAAAG‑CCTG‑TTATCAg                                                                                                                                                                                                     <  1:1462024/48‑1 (MQ=255)
                                                                                                                                                                                                                                        gtgtgt‑TTATGTTCAATTTTGCAGTCAGCCGCGAAAG‑CCTG‑TTATCAg                                                                                                                                                                                                     >  2:1462024/1‑48 (MQ=255)
                                                                                                                                                                                                                                         tgtgt‑TTATGTTCAATTTTGCAGTCAGCCGCGAAAG‑CCTG‑TTATCAGGATTTCAGTG‑GT‑TTTTCTTTATTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTA‑CTTTCTGCTTTTCAGTTGCCGCAAAGT‑AGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTCGCGCTATTATGGAAGGGCCAGGTGGCCtg  <  2:117866/238‑1 (MQ=255)
                                                                                                                                                                                                                                         |                                                                                                                                                                                                                                                    
AATAGCAGCTATGTTCTTACCAATGACGATCTGGAATATCGCCACAAAGTCAGCCCGTATGTTGGCCGTACCATTGGCGCGCGTATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTC‑CGGTTAAGGTGTGT‑TTATGTTCAATTTTGCAGTCAGCCGCGAAAG‑CCTG‑TTATCAGGATTTCAGTG‑GT‑TTTTCTTTATTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTA‑CTTTCTGCTTTTCAGTTGCCGCAAAGT‑AGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTCGCGCTATTATGGAAGGGCCAGGTGGCCTG  >  NC_000913/540326‑540795

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑