New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 2791557	47 (0.740)	8 (0.130)	6/312	5.5	13.3%	coding (285/1449 nt)	gabD	succinate‑semialdehyde dehydrogenase I, NADP‑dependent
	?	NC_000913	= 2791668	60 (1.010)					coding (396/1449 nt)	gabD	succinate‑semialdehyde dehydrogenase I, NADP‑dependent
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GTTGATTAACGGGGAATGGCTGGACGCCAACAATGGTGAAGCCATCGACGTCACCAATCCGGCGAACGGCGACAAGCTGGGTAGCGTGCCGAAAATGGGCGCGGATGAAACCCGCGCCGCTATCGACGCCGCCAACCGCGCCCTGCCCGCCTGGCGCGCGCTCACCGCCAAAGAACGCGCCACCATTCTGCGCAACTGGTTCAATTTGATGATGGAGCATCAGGACGATTTAGCGCGCCTGATGACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/2791311‑2791557 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcctgatgaccAGGAATGGTGTCGCCATAAATGCGTTTGCCTTCTTCGGCAAACCACTCAATAAAGGAGGCGGCGTAGCTGATTTCGCCTTTCGCTTCGGCCAGTGGTTTACCCTGTTCGAGGGTCATCAGGCGCGCTAAATCGTCCTGATGCTCCATCATCAAATTGAACCAGTTGCGCAGAATGGTGGCGCGTTCTTTGGCGGTGAGCGCGCGCCAGGCGGGCAGGGCGCGGTTGGCG  <  NC_000913/2791668‑2791440                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              GTTGATTAACGGGGAATGGCTGGACGCCAACAATGGTGAAGCCATCGACGTCACCAATCCGGCGAACGGCGACAAGCTGGGTAGCGTGCCGAAAATGGGCGCGGATGAAACCCGCGCCGCTATCGACGCCGCCAACCGCGCCCTGCCCGCCTGGCGCGCGCTCACCGCCAAAGAACGCGCCACCATTCTGCGCAACTGGTTCAATTTGATGATGGAGCATCAGGACGATTTAGCGCGCC                                                                                                                                                                                                                                               <  1:725380/239‑1                       GACGCCAACAATGGTGAAGCCATCGACGTCACCAATCCGGCGAACGGCGACAAGCTGGGTAGCGTGCCGAAAATGGGCGCGGATGAAACCCGCGCCGCTATCGACGCCGCCAACCGCGCCCTGCCCGCCTGGCGCGCGCTCACCGCCAAAGAACGCGCCACCATTCTGCGCAACTGGTTCAATTTGATGATGGAGCATCAGGACGATTTAGCGCGCCTGAT                                                                                                                                                                                                                                           <  1:920305/221‑1                       GACGCCAACAATGGTGAAGCCATCGACGTCACCAATCCGGCGAACGGCGACAAGCTGGGTAGCGTGCCGAAAATGGGCGCGGATGAAACCCGCGCCGCTATCGACGCCGCCAACCGCGCCCTGCCCGCCTGGCGCGCGCTCACCGCCAAAGAACGCGCCACCATTCTGCGCAACTGGTTCAATTTGATGATGGAGCATCAGGACGATTTAACGCGCCTGAT                                                                                                                                                                                                                                           >  2:920305/1‑221                                                          TCCGGCGAACGGCGACAAGCTGGGTAGCGTGCCGAAAATGGGCGCGGATGAAACCCGCGCCGCTATCGACGCCGCCAACCGCGCCCTGCCCGCCTGGCGCGCGCTCACCGCCAAAGAACGCGCCACCATTCTGCGCAACTGGTTCAATTTGATGATGGAGCATCAGGACGATTTAGCGCGCCTGAT                                                                                                                                                                                                                                           >  2:724351/1‑186                                                          TCCGGCGAACGGCGACAAGCTGGGTAGCGTGCCGAAAATGGGCGCGGATGAAACCCGCGCCGCTATCGACGCCGCCAACCGCGCCCTGCCCGCCTGGCGCGCGCTCACCGCCAAAGAACGCGCCACCATTCTGCGCAACTGGTTCAATTTGATGATGGAGCATCAGGACGATTTAGCGCGCCTGAT                                                                                                                                                                                                                                           <  1:724351/186‑1                                                                                                                                                        TGGCGCGCGCTCACCGCCAAAGAACGCGCCACCATTCTGCGCAACTGGTTCAATTTGATGATGGAGCATCAGGACGATTTAGCGCGCCTGATGACCAGGAATGGTGTCGCCATAAATGCGTTTGCCTTCTTCGGCAAACCACTCAATAAAGGAGGCGGCGTAGCTGATTTCGCCTTTCGCTTCGGCCAGTGGTTTACC                                                                                                                                 <  1:383312/198‑1                                                                                                                                                        TGGCGCGCGCTCACCGCCAAAGAACGCGCCACCATTCTGCGCAACTGGTTCAATTTGATGATGGAGCATCAGGACGATTTAGCGCGCCTGATGACCAGGAATGGTGTCGCCATAAATGCGTTTGCCTTCTTCGGCAAACCACTCAATAAAGGAGGCGGCGTAGCTGATTTCGCCTTTCGCTTCGGCCAGTGGTTTACC                                                                                                                                 >  2:383312/1‑198                                                                                                                                                          GCGCGCGCTCACCGCCAAAGAACGCGCCACCATTCTGCGCAACTGGTTCAATTTGATGATGGAGCATCAGGACGATTTAGCGCGCCTGATGACCAGGAATGGTGTCGCCATAAATGCGTTTGCCTTCTTCGGCAAACCACTCAATAAAGGAGGCGGCGTAGCTGATTTCGCCTTTCGCTTCGGCCAGTGGTTTACC                                                                                                                                 <  1:295750/196‑1                                                                                                                                                          GCGCGCGCTCACCGCCAAAGAACGCGCCACCATTCTGCGCAACTGGTTCAATTTGATGATGGAGCATCAGGACGATTTAGCGCGCCTGATGACCAGGAATGGTGTCGCCATAAATGCGTTTGCCTTCTTCGGCAAACCACTCAATAAAGGAGGCGGCGTAGCTGATTTCGCCTTTCGCTTCGGCCAGTGGTTTACC                                                                                                                                 >  2:295750/1‑196                                                                                                                                                                          AAAGAACGCGCCACCATTCTGCGCAACTGGTTCAATTTGATGATGGAGCATCAGGACGATTTAGCGCGCCTGATGACCAGGAATGGTGTCGCCATAAATGCGTTTGCCTTCTTCGGCAAACCACTCAATAAAGGAGGCGGCGTAGCTGATTTCGCCTTTCGCTTCGGCCAGTGGTTTAC                                                                                                                                  >  1:881039/1‑179                                                                                                                                                                          AAAGAACGCGCCACCATTCTGCGCAACTGGTTCAATTTGATGATGGAGCATCAGGACGATTTAGCGCGCCTGATGACCAGGAATGGTGTCGCCATAAATGCGTTTGCCTTCTTCGGCAAACCACTCAATAAAGGAGGCGGCGTAGCTGATTTCGCCTTTCGCTTCGGCCAGTGGTTTAC                                                                                                                                  <  2:881039/179‑1                                                                                                                                                                          AAAGAACGCGCCACCATTCTGCGCAACTGGTTCAATTTGATGATGGAGCATCAGGACGATTTAGCGCGCCTGAT                                                                                                                                                                                                                                           >  1:538509/1‑74                                                                                                                                                                          AAAGAACGCGCCACCATTCTGCGCAACTGGTTCAATTTGACGATGGAGCATCAGGACGATTTAGCGCGCCTGAT                                                                                                                                                                                                                                           <  2:538509/74‑1                                                                                                                                                                                CGCGCCACCATTCTGCGCAACTGGTTCAATTTGATGATGGAGCATCAGGACGATTTAGCGCGCCTGAT                                                                                                                                                                                                                                           >  1:458763/1‑68                                                                                                                                                                                CGCGCCACCATTCTGCGCAACTGGTTCAATTTGATGATGGAGCATCAGGACGATTTAGCGCGCCTGAT                                                                                                                                                                                                                                           <  2:458763/68‑1                                                                                                                                                                                              GCGCAACTGGTTCAATTTGATGATGGAGCATCAGGACGATTTAGCGCGCCTGATGACCAGGAATGGTGTCGCCATAAATGCGTTTGCCTTCTTCGGCAAACCACTCAATAAAGGAGGCGGCGTAGCTGATTTCGCCTTTCGCTTCGGCCAGTGGTTTACC                                                                                                                                 <  1:900826/160‑1                                                                                                                                                                                              GCGCAACTGGTTCAATTTGATGATGGAGCATCAGGACGATTTAGCGCGCCTGATGACCAGGAATGGTGTCGCCATAAATGCGTTTGCCTTCTTCGGCAAACCACTCAATAAAGGAGGCGGCGTAGCTGATTTCGCCTTTCGCTTCGGCCAGTGGTTTACC                                                                                                                                 >  2:900826/1‑160                                                                                                                                                                                                                                               CTGATGACCAGGAATGGTGTCGCCATAAATGCGTTTGCCTTCTTCGGCAAACCACTCAATAAAGGAGGCGGCGTAGCTGATTTCGCCTTTCGCTTCGGCCAGTGGTTTACCCTGTTCGAGGGTCATCAGGCGCGCTAAATCGTCCTGATGCTCCATCATCAAATTGAACCAGTTGCGCAGAATGGTGGCGCGTTCTTTGGCGGTGAGCGCGCGCCAGGCGGGCAGGGCGCGGTTGGCG  <  2:584000/238‑1                                                                                                                                                                                                                                                  ATGACCAGGAATGGTGTCGCCATAAATGCGTTTGCCTTCTTCGGCAAACCACTCAATAAAGGAGGCGGCGTAGCTGATTTCGCCTTTCGCTTCGGCCAGTGGTTTACCCTGTTCGAGGGTCATCAGGCGCG                                                                                                          >  2:2002/1‑131                                                                                                                                                                                                                                                  ATGACCAGGAATGGTGTCGCCATAAATGCGTTTGCCTTCTTCGGCAAACCACTCAATAAAGGAGGCGGCGTAGCTGATTTCGCCTTTCGCTTCGGCCAGTGGTTTACCCTGTTCGAGGGTCATCAGGCGCG                                                                                                          <  1:2002/131‑1                                                                                                                                                                                                                                                  ATGACCAGGAATGGTGTCGCCATAAATGCGTTTGCCTTCTTCGGCAAACCACTCAATAAAGGAGGCGGCGTAGCTGATTTCGCCTTTCGCTTCGGCCAGTGGTTTACCCTGTTCGAGGGTCATCAG                                                                                                               >  1:629873/1‑126                                                                                                                                                                                                                                                  ATGACCAGGAATGGTGTCGCCATAAATGCGTTTGCCTTCTTCGGCAAACCACTCAATAAAGGAGGCGGCGTAGCTGATTTCGCCTTTCGCTTCGGCCAGTGGTTTACCCTGTTCGAGGGTCATCAG                                                                                                               <  2:629873/126‑1                                                                                                                                                                                                                                                       CAGGAATGGTGTCGCCATAAATGCGTTTGCCTTCTTCGGCAAACCACTCAATAAAGGAGGCGGCGTAGCTGATTTCGCCTTTCGCTTCGGCCAGTGGTTTACCCTGTTCGAGGGTCATCAGGCGCGCTAAATCGTCCTGATGCTCCATCATCAAATTGAACCAGTTGCGCA                                                             <  2:353702/171‑1                                                                                                                                                                                                                                                       CAGGAATGGTGTCGCCATAAATGCGTTTGCCTTCTTCGGCAAACCACTCAATAAAGGAGGCGGCGTAGCTGATTTCGCCTTTCGCTTCGGCCAGTGGTTTACCCTGTTCGAGGGTCATCAGGCGCGCTAAATCGTCCTGATGCTCCATCATCAAATTGAACCAGTTGCGCA                                                             >  1:353702/1‑171                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              GTTGATTAACGGGGAATGGCTGGACGCCAACAATGGTGAAGCCATCGACGTCACCAATCCGGCGAACGGCGACAAGCTGGGTAGCGTGCCGAAAATGGGCGCGGATGAAACCCGCGCCGCTATCGACGCCGCCAACCGCGCCCTGCCCGCCTGGCGCGCGCTCACCGCCAAAGAACGCGCCACCATTCTGCGCAACTGGTTCAATTTGATGATGGAGCATCAGGACGATTTAGCGCGCCTGATGACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/2791311‑2791557 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcctgatgaccAGGAATGGTGTCGCCATAAATGCGTTTGCCTTCTTCGGCAAACCACTCAATAAAGGAGGCGGCGTAGCTGATTTCGCCTTTCGCTTCGGCCAGTGGTTTACCCTGTTCGAGGGTCATCAGGCGCGCTAAATCGTCCTGATGCTCCATCATCAAATTGAACCAGTTGCGCAGAATGGTGGCGCGTTCTTTGGCGGTGAGCGCGCGCCAGGCGGGCAGGGCGCGGTTGGCG  <  NC_000913/2791668‑2791440

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.