BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
JC JC	NC_000913	1,293,008	IS1 (+) +9 bp	intergenic (‑86/‑511)	hns ← / → tdk	global DNA‑binding transcriptional dual regulator H‑NS/thymidine kinase/deoxyuridine kinase

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	1293008 =	0 (0.000)	52 (0.820)	40/334	0.5	100%	intergenic (‑86/‑519)	hns/tdk	global DNA‑binding transcriptional dual regulator H‑NS/thymidine kinase/deoxyuridine kinase
*	?	NC_000913	1978503 =	NA (NA)	52 (0.820)	40/334	0.5	100%	noncoding (768/768 nt)	IS1	repeat region
*	?	NC_000913	= 1293016	0 (0.000)	62 (0.980)	46/334	0.3	100%	intergenic (‑94/‑511)	hns/tdk	global DNA‑binding transcriptional dual regulator H‑NS/thymidine kinase/deoxyuridine kinase
*	?	NC_000913	= 1979270	NA (NA)	62 (0.980)	46/334	0.3	100%	noncoding (1/768 nt)	IS1	repeat region

Only 100 of 117 total aligned reads displayed.

CCGCGCTTTCTTCTTCGCGACGTTCGTTAACAACAACTTCTAATTTTTCCAGCATTTCTTCCAGCGTTTCAAGTGTACATTCTCTTGCCTGCGCACGAAGAGTACGGATGTTGTTCAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTC  >  NC_000913/1292784‑1293250

tgacggatggctggacgctgtatgaatcccgcctgaagggaaagctgcacgtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccAGGAATTCAAAAtt                                                                                                                                                                                                                                       >  2:926986‑M1/225‑238 (MQ=255)

                        aatcccgcctgaagggaaagctgcacgtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccAGAAATTCAAAATTGTTCTTTATTTTGTGCCGCCaataa                                                                                                                                                                                                              <  2:225037‑M1/39‑1 (MQ=255)

                              gcctgaagggaaagctgcacgtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccAGGAATTCAAAAtt                                                                                                                                                                                                                                       >  1:927597‑M1/195‑208 (MQ=255)

                              gcctgaagggaaagctgcacgtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCt                                                                                                                                                                                                        <  1:1654‑M1/45‑1 (MQ=255)

                              gcctgaagggaaagctgcacgtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCt                                                                                                                                                                                                        <  1:616144‑M1/45‑1 (MQ=255)

                               cctgaagggaaagctgcacgtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCaataaata                                                                                                                                                                                                           <  1:823828‑M1/42‑1 (MQ=255)

                               cctgaagggaaagctgcacgtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCaataaata                                                                                                                                                                                                           <  2:330792‑M1/42‑1 (MQ=255)

                                 caacTTCTAATTTTTCCAGCATTTCTTCCAGCGTTTCAAGTGTACATTCTCTTGCCTGCGCACGAAGAGTACGGATGTTGTTCAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAggtgatgctgccaacttactgatttagtgtatgatggtg                                                                                                                                                                                                     >  2:61918‑M1/1‑200 (MQ=255)

                                       cTAATTTTTCCAGCATTTCTTCCAGCGTTTCAAGTGTACATTCTCTTGCCTGCGCACGAAGAGTACGGATGTTGTTCAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAggtgatgctgccaacttactgatttagtgtatgatggtgtttttg                                                                                                                                                                                               <  1:212637‑M1/239‑46 (MQ=255)

                                       cTAATTTTTCCAGCATTTCTTCCAGCGTTTCAAGTGTACATTCTCTTGCCTGCGCACGAAGAGTACGGATGTTGTTCAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAA‑‑TAAGGAATTCAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgag                                                                                                                                                                                             >  1:603505‑M1/1‑192 (MQ=255)

                                             tgcacgtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAg                                                                                                                                                                                          <  2:246838‑M1/59‑1 (MQ=255)

                                                acgtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAg                                                                                                                                                                                      <  2:663454‑M1/63‑1 (MQ=255)

                                                        tcttcCAGCGTTTCAAGTGTACATTCTCTTGCCTGCGCACGAAGAGTACGGATGTTGTTCAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggctt                                                                                                                                                                              <  1:61918‑M1/239‑63 (MQ=255)

                                                           aagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAg                                                                                                                                                                                 >  2:1654‑M1/166‑233 (MQ=255)

                                                           aagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGAcg                                                                                                                                                                              >  1:663454‑M1/166‑236 (MQ=255)

                                                               gatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCata                                                                                                                                                                       >  2:188078‑M1/162‑239 (MQ=255)

                                                                cGTTTCAAGTGTACATTCTCTTGCCTGCGCACGAAGAGTACGGATGTTGTTCAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggct                                                                                                                                                                               >  1:58303‑M1/1‑169 (MQ=255)

                                                                 tatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCAtata                                                                                                                                                                     >  1:330792‑M1/160‑239 (MQ=255)

                                                                 gTTTCAAGTGTACATTCTCTTGCCTGCGCACGAAGAGTACGGATGTTGTTCAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttct                                                                                                                                                                      <  2:58303‑M1/238‑71 (MQ=255)

                                                                    tCAAGTGTACATTCTCTTGCCTGCGCACGAAGAGTACGGATGTTGTTCAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAggtgatgctgccaacttactgatttagtgtatga                                                                                                                                                                                                          <  1:228067‑M1/199‑35 (MQ=255)

                                                                    tCAAGTGTACATTCTCTTGCCTGCGCACGAAGAGTACGGATGTTGTTCAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAggtgatgctgccaacttactgatttagtgtatga                                                                                                                                                                                                          >  2:228067‑M1/1‑165 (MQ=255)

                                                                          cgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGAcg                                                                                                                                                                              >  1:852638‑M1/151‑221 (MQ=255)

                                                                               ttCTCTTGCCTGCGCACGAAGAGTACGGATGTTGTTCAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcc                                                                                                                                                       <  1:21198‑M1/239‑86 (MQ=255)

                                                                                     tGCCTGCGCACGAAGAGTACGGATGTTGTTCAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAggtgatgctgcc                                                                                                                                                                                                                                <  1:20597‑M1/160‑13 (MQ=255)

                                                                                     tGCCTGCGCACGAAGAGTACGGATGTTGTTCAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAggtgatgctgcc                                                                                                                                                                                                                                >  2:20597‑M1/1‑148 (MQ=255)

                                                                                      cataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGAtt                                                                                                                                                <  2:764964‑M1/101‑1 (MQ=255)

                                                                                          acctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCgc                                                                                                                                            >  2:616144‑M1/135‑239 (MQ=255)

                                                                                            gcACGAAGAGTACGGATGTTGTTCAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAggtgatgctgcc                                                                                                                                                                                                                                <  2:196753‑M1/153‑13 (MQ=255)

                                                                                                            acctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGt                                                                                                                                     >  2:823828‑M1/117‑228 (MQ=255)

                                                                                                            acctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTaaaa                                                                                                                           >  1:246838‑M1/117‑238 (MQ=255)

                                                                                                                gttCAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggc                                                                                                                      >  2:719896‑M1/1‑121 (MQ=255)

                                                                                                                      aaTTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtg                                                                                                                                                                                  >  2:149600‑M1/1‑115 (MQ=255)

                                                                                                                      aaTTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtg                                                                                                                                                                                  <  1:149600‑M1/173‑59 (MQ=255)

                                                                                                                       aTTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAA‑‑TAAGGAATTCAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagca                                                                                                               <  2:603505‑M1/237‑126 (MQ=255)

                                                                                                                           tAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccg                                                                                                            >  2:186796‑M1/1‑110 (MQ=255)

                                                                                                                                 agtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTac                                                                                                                                                          <  1:604452‑M1/91‑1 (MQ=255)

                                                                                                                                 agtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTac                                                                                                                                                          >  2:604452‑M1/96‑186 (MQ=255)

                                                                                                                                       tCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcg                                                                                               <  1:186796‑M1/239‑142 (MQ=255)

                                                                                                                                                     tcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAgg                                                                                 >  1:245748‑M1/76‑239 (MQ=255)

                                                                                                                                                     tcAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgct                                                                                                                                                                                        <  2:344464‑M1/136‑53 (MQ=255)

                                                                                                                                                     tcAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgct                                                                                                                                                                                        >  1:344464‑M1/1‑84 (MQ=255)

                                                                                                                                                     tcAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAggtgatgctgccaactta                                                                                                                                                                                                                          >  2:318821‑M1/1‑84 (MQ=255)

                                                                                                                                                     tcAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAggtgatgctgccaactta                                                                                                                                                                                                                          >  2:266450‑M1/1‑84 (MQ=255)

                                                                                                                                                     tcAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAggtgatgctgccaactta                                                                                                                                                                                                                          <  1:266450‑M1/102‑19 (MQ=255)

                                                                                                                                                     tcAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAggtgatgctgccaactta                                                                                                                                                                                                                          <  1:318821‑M1/102‑19 (MQ=255)

                                                                                                                                                       aaaCTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAggtgatgctgccaa                                                                                                                                                                                                                              >  1:243115‑M1/1‑82 (MQ=255)

                                                                                                                                                       aaaCTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGCGCAATAGCCAGGAATGTAAGGAATTCAggtgatgctgccaa                                                                                                                                                                                                                              <  2:243115‑M1/96‑15 (MQ=255)

                                                                                                                                                                  gggaTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAggtgatgctgcaaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgttgctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaac                                                                    <  2:866273‑M1/239‑169 (MQ=255)

                                                                                                                                                                     gtggtTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatc                                                                                                   >  2:455507‑M1/1‑68 (MQ=255)

                                                                                                                                                                     gtggtTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatc                                                                                                   <  1:455507‑M1/205‑138 (MQ=255)

                                                                                                                                                                      caaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCga                                                                                                                                                     >  2:820621‑M1/59‑154 (MQ=255)

                                                                                                                                                                        gtTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggca                                                              >  2:28645‑M1/1‑65 (MQ=255)

                                                                                                                                                                        gtTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAggtgatgctgccaa                                                                                                                                                                                                                              >  2:192116‑M1/1‑65 (MQ=255)

                                                                                                                                                                        gtTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAggtgatgctgccaa                                                                                                                                                                                                                              <  1:192116‑M1/79‑15 (MQ=255)

                                                                                                                                                                        aagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGAcg                                                                                                                                                                              >  1:792143‑M1/57‑127 (MQ=255)

                                                                                                                                                                        aagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGAcg                                                                                                                                                                              <  2:792143‑M1/71‑1 (MQ=255)

                                                                                                                                                                         agtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGtcttc                                                             >  1:191276‑M1/56‑239 (MQ=255)

                                                                                                                                                                               gAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaactgcag                                                       <  1:864580‑M1/239‑182 (MQ=255)

                                                                                                                                                                                  gTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggctt                                                                                                                                                                              >  1:26440‑M1/1‑55 (MQ=255)

                                                                                                                                                                                  gTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggctt                                                                                                                                                                              <  2:26440‑M1/117‑63 (MQ=255)

                                                                                                                                                                                       atctgaacataaaacactatcaataagttggagtcattaccAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGt                                                                                                                                     <  2:897481‑M1/112‑1 (MQ=255)

                                                                                                                                                                                       atctgaacataaaacactatcaataagttggagtcattaccAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGt                                                                                                                                     >  1:897481‑M1/42‑153 (MQ=255)

                                                                                                                                                                                            agCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacg                                                                                                                                       >  2:16583‑M1/1‑45 (MQ=255)

                                                                                                                                                                                            agCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacg                                                                                                                                       <  1:16583‑M1/146‑102 (MQ=255)

                                                                                                                                                                                            agCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggctt                                                                                                                                                                              <  1:478148‑M1/107‑63 (MQ=255)

                                                                                                                                                                                            agCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggctt                                                                                                                                                                              >  2:478148‑M1/1‑45 (MQ=255)

                                                                                                                                                                                            aacataaaacactatcaataagttggagtcattaccAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCa                                                                   >  1:898497‑M1/37‑214 (MQ=255)

                                                                                                                                                                                            aacataaaacactatcaataagttggagtcattaccAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCa                                                                   <  2:898497‑M1/178‑1 (MQ=255)

                                                                                                                                                                                             gCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctc                                                                                                                                                        >  2:206858‑M1/1‑44 (MQ=255)

                                                                                                                                                                                             gCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctc                                                                                                                                                        <  1:206858‑M1/128‑85 (MQ=255)

                                                                                                                                                                                              cataaaacactatcaataagttggagtcattaccAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGTTGTGTTTACgag                                        <  1:93470‑M1/205‑1 (MQ=255)

                                                                                                                                                                                                ttAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaactgcagttcacttacaccgctt                                       >  2:755089‑M1/1‑41 (MQ=255)

                                                                                                                                                                                                 tAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatca                                                                                                                                                                  >  2:925342‑M1/1‑40 (MQ=255)

                                                                                                                                                                                                 tAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAggtgatgctgccaacttactgatttagtgt                                                                                                                                                                                                              <  2:734343‑M1/70‑31 (MQ=255)

                                                                                                                                                                                                 tAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAggtgatgctgccaacttactgatttagtgt                                                                                                                                                                                                              >  1:734343‑M1/1‑40 (MQ=255)

                                                                                                                                                                                                        tatcaataagttggagtcattaccAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGtcttc                                                             <  2:831417‑M1/184‑1 (MQ=255)

                                                                                                                                                                                                        tatcaataagttggagtcattaccAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGtcttc                                                             >  1:831417‑M1/25‑208 (MQ=255)

                                                                                                                                                                                                        aGTTGTGCAATAGCCAGGAATGTAAGGAATTCAggtgatgctgcc                                                                                                                                                                                                                                <  2:274911‑M1/45‑13 (MQ=255)

                                                                                                                                                                                                        aGTTGTGCAATAGCCAGGAATGTAAGGAATTCAggtgatgctgcc                                                                                                                                                                                                                                >  1:274911‑M1/1‑33 (MQ=255)

                                                                                                                                                                                                         atcattaagttggagtcattaccAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCACAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTa                                                         >  2:252340‑M1/24‑211 (MQ=255)

                                                                                                                                                                                                         atcaataagttggagtcattaccAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGc                                                                                                                                                                   >  1:402474‑M1/24‑105 (MQ=255)

                                                                                                                                                                                                         atcaataagttggagtcattaccAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGc                                                                                                                                                                   <  2:402474‑M1/82‑1 (MQ=255)

                                                                                                                                                                                                         atcaataagttggagtcattaccAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTAttt                                                                                                                                                            <  1:546842‑M1/89‑1 (MQ=255)

                                                                                                                                                                                                         atcaataagttggagtcattaccAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTAttt                                                                                                                                                            >  2:546842‑M1/24‑112 (MQ=255)

                                                                                                                                                                                                         atcaataagttggagtcattaccAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCACAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTa                                                         <  1:252340‑M1/188‑1 (MQ=255)

                                                                                                                                                                                                                  ttggagtcattaccAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGc                                                                                                                                                                   >  1:740115‑M1/15‑96 (MQ=255)

                                                                                                                                                                                                                    ggagtcattaccAGGAATTCAAAATTGTTCTTTATTTTGTgc                                                                                                                                                                                                                       <  2:650137‑M1/30‑1 (MQ=255)

                                                                                                                                                                                                                    ggagtcattaccAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGtct                                                               >  2:65276‑M1/13‑194 (MQ=255)

                                                                                                                                                                                                                    ggagtcattaccAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGtct                                                               <  1:65276‑M1/182‑1 (MQ=255)

                                                                                                                                                                                                                      agtcattaccAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGAt                                                                                                                  <  1:229065‑M1/131‑1 (MQ=255)

                                                                                                                                                                                                                      agtcattaccAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGAt                                                                                                                  >  2:229065‑M1/11‑141 (MQ=255)

                                                                                                                                                                                                                          aaTGTAAGGAATTCAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaactgcagttcacttacaccgcttctcaacccggtacgcac                      <  1:28645‑M1/229‑215 (MQ=255)

                                                                                                                                                                                                                                   aaTTCAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaactgcagttcacttacaccgcttctcaacccggtacgcaccagaaaatca            >  1:212985‑M1/1‑6 (MQ=255)

                                                                                                                                                                                                                                    aTTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTc  >  1:214438/1‑239 (MQ=255)

                                                                                                                                                                                                                                     ttCAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggt                                                                                                                                                                                           <  2:308441‑M1/53‑50 (MQ=255)

                                                                                                                                                                                                                                     ttCAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggt                                                                                                                                                                                           >  1:308441‑M1/1‑4 (MQ=255)

                                                                                                                                                                                                                                      tCAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaccatggcaactgcag                                                       >  2:570823‑M1/1‑3 (MQ=255)

                                                                                                                                                                                                                                      tCAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaactgcag                                                       <  1:570823‑M1/184‑182 (MQ=255)

                                                                                                                                                                                                                                      tCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTcac                                                                                                         <  1:732420/134‑1 (MQ=255)

                                                                                                                                                                                                                                      tCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTcac                                                                                                         >  2:732420/1‑134 (MQ=255)

CCGCGCTTTCTTCTTCGCGACGTTCGTTAACAACAACTTCTAATTTTTCCAGCATTTCTTCCAGCGTTTCAAGTGTACATTCTCTTGCCTGCGCACGAAGAGTACGGATGTTGTTCAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTC  >  NC_000913/1292784‑1293250

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 16 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.