| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,330,404 | A→C | pseudogene (3999/4605 nt) | yfaS ← | pseudogene, bacterial alpha2‑macroglobulin YfaS variant family; putative membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,330,404 | 0 | A | C | 98.6% | 263.3 / NA | 70 | pseudogene (3999/4605 nt) | yfaS | pseudogene, bacterial alpha2‑macroglobulin YfaS variant family; putative membrane protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base C (33/36); minor base T (0/1); total (33/37) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
ACCGGTTGCAGAATAAAGCTCATCTCTTCTTCACCAGGGATAAGCCGATACAACTGGCGTTCAACGGTCACCGGAATGTTACTTTGTTGAGCCATTTTTGCCGGCTCACGTCAGCGGACCTGCACATTTTGCGGCGATAATTCGTCACCAAA‑‑AGAGAGAATGTCCGGCACGCCCTGACCAACCCAACGCCAGTCTTCGCCCCCTCCAG‑TTAACTTATGTTTAGCCCATGCGCCCGCAGGCGCAGGCAAAACAACTGGAGGCATTGTCGCCATATATTTCGCCAGCCAGTTCATGGCCAGCGCGCGCTCAATAGTGGATTGCTCAGCGGTCAAACCACTTAAAATAGCGGCCGTCTGGGTAGCGTCGCCACCGCTATTAAGCAGCACAACCGTGTGCGCCAGCGGCTGATTGCTGTTTGCCGCTTTATCCCACGCATATT > NC_000913/2330189‑2330627 | aCCGGTTGCAGAATAAAGCTCATCTCTTCTTCACCAGGGATAAGCCGATACAACTGGCGTTCAACGGTCACCGGAATGTTACTTTGTTGAGCCATTTTTGCCGGCTCACGTCAGCGGACCTGCACATTTTGCGGCGATAATTCGTCACCAAA‑‑AGAGAGAATGTCCGGCACGCCCTGACCAACCCAACGCCAGTCTTCGCCCCCTCCAG‑TTAACTTCTGTTTAGCCCATGCGCCcgcag > 2:835815/1‑238 (MQ=255) ctgTTTCAGAAAACAGCTCTTCTCAGCTGCACGAGAGATAGGCCGATACAACTGGCCTGCAACGGTCCCCTGAATGTGTCTTTGTTGATCCATTTTTGCCGGCGCACGTCAGGGGACCTGCACATTGTGCGGCGATAATTCGTCACCAAA‑‑AGAGAGAATGTCCGGCACGCCCTGACCAACCCAGCGCCAGTCATCGCCCCCTCCAG‑TTAACATCTGTTTAGCCCAAGCGCCcgcaggcg < 2:883877/237‑1 (MQ=255) cGGTTGCAGAATAAAGCTCATCTCTTCTTCACCAGGGATAAGCCGATACAACTGGCGTTCAACGGTCACCGGAATGTTACTTTGTTGAGCCATTTTTGCCGGCTCACGTCAGCGGACCTGCACATTTTGCGGCGATAATTCGTCACCAAA‑‑AGAGAGAATGTCCGGCACGCCCTGACCAACCCAACGCCAGTCTTCGCCCCCTCCAG‑TTAACTTCTGTTTAGCCCATGCGCCcgcaggcg < 2:651363/239‑1 (MQ=255) aTCTCTTCTTCACCAGGGATAAGCCGATACAACTGGCGTTCAACGGTCACCGGAATGTTACTTTGTTGAGCCATTTTTGCCGGCTCACGTCAGCGGACCTGCACATTTTGCGGCGATAATTCGTCACCAAA‑‑AGAGAGAATGTCCGGCACGCCCTGACCAACCCAACGCCAGTCTTCGCCCCCTCCAG‑TTAACTTCTGCTTAGCCCATGCGCCCGCAGGCGCAGGCCACACAAATGGaag > 2:752258/1‑237 (MQ=255) ctctTCTTCACCAGGGATAAGCCGATACAACTGGCGTTCAACGGTCACCGGAATGTTACTTTGTTGAGCCATTTTTGCCGGCTCACGTCAGCGGACCTGCACATTTTGCGGCGATAATTCGTCACCAAA‑‑AGAGAGAATGTCCGGCACGCCCTGACCAACCCAACGCCAGTCTTCGCCCCCTCCAG‑TTAACTTCTGTTTAGCCCATGCGCCCGCAGGCGCAGGCAAAACAACTGGAGGCa > 1:226938/1‑239 (MQ=255) ctctTCTTCACCAGGGATAAGCCGATACAACTGGCGTTCAACGGTCACCGGAATGTTACTTTGTTGAGCCATTTTTGCCGGCTCACGTCAGCGGACCTGCACATTTTGCGGCGATAATTCGTCACCAAA‑‑AGAGAGAATGTCCGGCACGCCCTGACCAACCCAACGCCAGTCTTCGCCCCCTCCAG‑TTAACTTCTGTTTAGCCCATGCGCCCGCAGGCGCAGGCAAAACAACTGGAGGCa > 1:60262/1‑239 (MQ=255) ttcttcACCAGGGATAAGCCGATACAACTGGCGTTCAACGGTCACCGGAATGTTACTTTGTTGAGCCATTTTTGCCGGCTCACGTCAGCGGACCTGCACATTTTGCGGCGATAATTCGTCACCAAA‑‑AGAGAGAATGTCCGGCACGCCCTGACCAACCCAACGCCAGTCTTCGCCCCCTCCAG‑TTAACTTCTGTTTAGCCCATGCGCCCGCAGGCGCAGGCAAAACAACTGGAGGCATTg < 1:835815/239‑1 (MQ=255) aCCAGGGATAAGCCGATTCCACTGGCGTTCAACGGTCCCCGGAATGTTACTTTGTTGAGCCATTTTTGCCGGCTCACGTCAGCGGACCTGCACATTTTGCGGCGATAATTCGTCACCAAA‑‑AGAGAGAATGTCCGGCACGCCCTGACCAACCCAACGCCAGTCTTCGCCCCCTCCAG‑TTAACTTCTGTTTAGCCCATGCGCCCGCAGGCGCAGGCAAAACAACTGGAGGCATTGTCGCCa < 2:60262/239‑1 (MQ=255) aTACAACTGGCGTTCAACGGTCACCGGAATGTTACTTTGTTGAGCCATTTTTGCCGGCTCACGTCAGCGGACCTGCACATTTTGCGGCGATAATTCGTCACCAAA‑‑AGAGAGAATGTCCGGCACGCCCTGACCAACCCAACGCCAGTCTTCGCCCCCTCCAG‑TTAACTTCTGTTTAGCCCATGCGCCCGCAGGCGCAGGCAAAACAACTGGAGGCATTGTCGCCATATATTTCgccagcc < 2:226938/239‑1 (MQ=255) aCGGTCACCGGAATGTTACTTTGTTGAGCCATTTTTGCCGGCTCACGTCAGCGGACCTGCACATTTTGCGGCGATAATTCGTCACCAAA‑‑AGAGAGAATGTCCGGCACGCCCTGACCAACCCAACGCCAGTCTTCGCCCCCTCCAG‑TTAACTTCTGTTTAGCCCATGCGCCCGCAGGCGCAGGCAAAACAACTGGAGGCATTGTCGCCATATATTTCGCCAGCCAGTTCATGGCCAgcgc < 1:592602/239‑1 (MQ=255) gTCACCGGAATGTTACTTTGTTGAGCCATTTTTGCCGGCTCACGTCAGCGGACCTGCACATTTTGCGGCGATAATTCGTCCCCAAA‑‑AGAGAGAATGTCCGGCACGCCCTGCCCAACCCAACGCCAGTCTTCGCCCCCTCCAG‑TTAACTTCTGTTTAGCCCCTGCGCCCGCATGCGCAGGCAAACCACCTGGAGGCATTGTCGCCGTATCTTTTGCCAGCCAGTTCCTGGCCAtcgctc > 2:551955/1‑236 (MQ=255) aCCGGAATGTTACTTTGTTGAGCCATTTTTGCCGGCTCACGTCAGCGGACCTGCACATTTTGCGGCGATAATTCGTCACCAAA‑‑AGAGAGAATGTCCGGCACGCCCTGACCAACCCAACGCCAGTCTTCGCCCCCTCCAG‑TTAACTTCTGTTTAGCCCATGCGCCCGCAGGCGCAGGCAAAACAACTGGAGGCATTGTCGCCATATATTTCGCCAGCCAGTTCATGGCCAGCGCGCGCTc > 1:552079/1‑239 (MQ=255) aCCGGAATGTTACTTTGTTGAGCCATTTTTGCCGGCTCACGTCAGCGGACCTGCACATTTTGCGGCGATAATTCGTCACCAAA‑‑AGAGAGAATGTCCGGCACGCCCTGACCAACCCAACGCCAGTCTTCGCCCCCTCCAG‑TTAACTTCTGTTTAGCCCATGCGCCCGCAGGCGCAGGCAAAACAACTGGAGGCATTGTCGCCATATATTTCGCCAGCCAGTTCATGGCCAGCGCGCGCTc > 1:667212/1‑239 (MQ=255) gAATGTTACTTTGTTGAGCCATTTTTGCCGGCTCACGTCAGCGGACCTGCACATTTTGCGGCGATAATTCGTCACCAAA‑‑AGAGAGAATGTCCGGCACGCCCTGACCAACCCAACGCCAGTCTTCGCCCCCTCCAG‑TTAACTTCTGTTTAGCCCATGCGCCCGCAGGCGCAGGCAAAACAACTGGAGGCATTGTCGCCATATATTTCGCCAGCCAGTTCATGGCCAGCGCGCGCTCAATa < 1:180736/239‑1 (MQ=255) cTTTGTTGAGCCATTTTTGCCGGCTCACGTCAGCGGACCTGCACATTTTGCGGCGATAATTCGTCACCAAA‑‑AGAGAGAATGTCCGGCACGCCCTGACCAACCCAACGCCAGTCTTCGCCCCCTCCAG‑TTAACTTCTGTTTAGCCCATGCGCCCGCAGGCGCAGGCAAAACAACTGGAGGCATTg > 2:628816/1‑184 (MQ=255) cTTTGTTGAGCCATTTTTGCCGGCTCACGTCAGCGGACCTGCACATTTTGCGGCGATAATTCGTCACCAAA‑‑AGAGAGAATGTCCGGCACGCCCTGACCAACCCAACGCCAGTCTTCGCCCCCTCCAG‑TTAACTTCTGTTTAGCCCATGCGCCCGCAGGCGCAGGCAAAACAACTGGAGGCATTg < 1:628816/184‑1 (MQ=255) cTTTGTTGAGCCATTTTTGCCGGCTCACGTCAGCGGACCTGCACATTTTGCGGCGATAATTCGTCACCAAA‑‑AGAGAGAATGTCCGGCACGCCCTGACCAACCCAACGCCAGTCTTCGCCCCCTCCAG‑TTAACTTCTGTTTAGCCCATGCGCCCGCAGGCGCAGGCAAAACAACTGGAGGCATTGTCGCCATATATTTCGCCAGCCAGTTCATGGCCAgcgcgcg < 2:750840/224‑1 (MQ=255) cTTTGTTGAGCCATTTTTGCCGGCTCACGTCAGCGGACCTGCACATTTTGCGGCGATAATTCGTCACCAAA‑‑AGAGAGAATGTCCGGCACGCCCTGACCAACCCAACGCCAGTCTTCGCCCCCTCCAG‑TTAACTTCTGTTTAGCCCATGCGCCCGCAGGCGCAGGCAAAACAACTGGAGGCATTGTCGCCATATATTTCGCCAGCCAGTTCATGGCCAgcgcgcg > 1:750840/1‑224 (MQ=255) tgttgAGCCATTTTTGCCGGCTCACGTCAGCGGACCTGCACATTTTGCGGCGATAATTCGTCACCAAA‑‑AGAGAGAATGTCCGGCACGCCCTGACCAACCCAACGCCAGTCTTCGCCCCCTCCAG‑TTAACTTCTGTTTAGCCCATGCGCCCGCAGGCGCAGGCAAAACAACTGGAGGCATTGTCGCCATATATTTCGCCAGCCAGTTCATGGCCAGCGCGCGCTCAATAGTGGATTGCTc > 1:829022/1‑239 (MQ=255) ccATTTTTGCCGGCTCACGTCAGCGGACCTGCACATTTTGCGGCGATAATTCGTCACCAAA‑‑AGAGAGAATGTCCGGCACGCCCTGACCAACCCAACGCCAGTCTTCGCCCCCTCCAG‑TTAACTTCTGTTTAGCCCATGCGCCCGCAGGCGCAGGCAAAACAACTGGAGGCATTGTCGCCATATATTTCGCCAGCCAGTTCATGGCCAGCGCGCGCTCAATAGTGGATTGCTCAGCGGTc > 1:211364/1‑239 (MQ=255) tttttGCCGGCTCACGTCAGCGGACCTGCACATTTTGCGGCGATAATTCGTCACCAAA‑‑AGAGAGAATGTCCGGCACGCCCTGACCAACCCAACGCCAGTCTTCGCCCCCTCCAG‑TTAACTTCTGTTTAGCCCATGCGCCCGCAGGCGCAGGCAAAACAACTGGAGGCATTGTCGCCATATATTTCGCCAGCCAGTTCATGGCCAGCGCGCGCTCAATAGTGGATTGCTCAGCGGTCaaa < 1:693802/239‑1 (MQ=255) cTCACGTCAGCGGACCTGCACATTTTGCGGCGATAATTCGTCACCAAA‑‑AGAGAGAATGTCCGGCACGCCCTGACCAACCCAACGCCAGTCTTCGCCCCCTCCAG‑TTAACTTCTGTTTAGCCCATGCGCCCGCAGGCGCAGGCAAAACAACTGGAGGCATTGTCGCCATATATTTCGCCAGCCAGTTCATGGCCAGTGCGCGCTCAATAGTGGATTGCTCAGCGGTCaaa > 2:102448/1‑229 (MQ=255) cTCACGTCAGCGGACCTGCACATTTTGCGGCGATAATTCGTCACCAAA‑‑AGAGAGAATGTCCGGCACGCCCTGACCAACCCAACGCCAGTCTTCGCCCCCTCCAG‑TTAACTTCTGTTTAGCCCATGCGCCCGCAGGCGCAGGCAAAACAACTGGAGGCATTGTCGCCATATATTTCGCCAGCCAGTTCATGGCCAGTGCGCGCTCAATAGTGGATTGCTCAGCGGTCaaa < 1:102448/229‑1 (MQ=255) gTCAGCGGACCTGCACATTTTGCGGCGATAATTCGTCACCAAA‑‑AGAGAGAATGTCCGGCACGCCCTGACCAACCCAACGCCAGTCTTCGCCCCCTCCAG‑TTAACTTCTGTTTAGCCCATGCGCCCGCAGGCGCAGGCAAAACAACTGGAGGCATTGTCGCCATATATTTCGCCAGCCAGTTCATGGCCAGCGCGCGCTCAATAGTGGATTGCTCAGCGGTCAAACCACTTAAAATAGCg < 1:232081/239‑1 (MQ=255) cGGACCTGCACATTTTGCGGCGATAATTCGTCACCAAA‑‑AGAGAGAATGTCCGGCACGCCCTGACCAACCCAACGCCAGTCTTCGCCCCCTCCAG‑TTAACTTCTGTTTAGCCCATGCGCCCGCAGGCGCAGGCAAAACAACTGGAGGCATTGTCGCCATATATTTCgccagc > 2:201544/1‑171 (MQ=255) cGGACCTGCACATTTTGCGGCGATAATTCGTCACCAAA‑‑AGAGAGAATGTCCGGCACGCCCTGACCAACCCAACGCCAGTCTTCGCCCCCTCCAG‑TTAACTTCTGTTTAGCCCATGCGCCCGCAGGCGCAGGCAAAACAACTGGAGGCATTGTCGCCATATATTTCgccagc < 1:201544/171‑1 (MQ=255) ggACCTGCACATTTTGCGGCGATAATTCGTCACCAAA‑‑AGAGAGAATGTCCGGCACGCCCTGACCAACCCAACGCCAGTCTTCGCCCCCTCCAG‑TTAACTTCTGTTTAGCCCATGCGCCCGCAGGCGCAGGCAAAACAACTGGAGGCATTGTCGCCATATATTTCGCCAGCCAGTTCATGGCCAGCGCGCGCTCAATAGTGGATTGCTCAGCGGTCAAACCACTTAAAATAGCGGc < 1:752258/235‑1 (MQ=255) ggACCTGCACATTTTGCGGCGATAATTCGTCACCAAA‑‑AGAGAGAATGTCCGGCACGCCCTGACCAACCCAACGCCAGTCTTCGCCCCCTCCAG‑TTAACTTCTGTTTAGCCCATGCGCCCGCAGGCGCAGGCAAAACAACTGGAGGCATTGTCGCCATATATTTCGCCAGCCAGTTCATGGCCAGCGCGCGCTCAATAGTGGATTGCTCAGCGGTCAAACCACTTAAAATAGCGGc < 1:174152/235‑1 (MQ=255) aCCTGCACATTTTGCGGCGATAATTCGTCACCAAA‑‑AGAGAGAATGTCCGGCACGCCCTGACCAACCCAACGCCAGTCTTCGCCCCCTCCAG‑TTAACTTCTGTTTAGCCCATGCGCCcgcaggc < 1:519261/123‑1 (MQ=255) aCCTGCACATTTTGCGGCGATAATTCGTCACCAAA‑‑AGAGAGAATGTCCGGCACGCCCTGACCAACCCAACGCCAGTCTTCGCCCCCTCCAG‑TTAACTTCTGTTTAGCCCATGCGCCcgcaggc > 2:519261/1‑123 (MQ=255) cTGCACATTTTGCGGCGATAATTCGTCACCAAAAGAGAGAGAATGTCCGGCACGCCCTGACCAACCCAACGCCAGTCTTCGCCCCCTCCAG‑TTAACTTCTGTTTAGCCCATGCGCCCGCAGGCGCAGGCAAAACAACTGGAGGCATTGTTGCCATATATTTCGCCAGCCAGTTCATGGCCAGCGCGCGCTCAATAGGGGATTGCTCAGCGGTCAAACCACTTAAAATAGCGGCCg > 1:559354/1‑235 (MQ=255) cTGCACATTTTGCGGCGATAATTCGTCACCAAA‑‑AGAGAGAATGTCCGGCACGCCCTGACCAACCCAACGCCAGTCTTCGCCCCCTCCAG‑TTAACTTCTGTTTAGCCCATGCGCCCGCAGGCGCAGGCAAAACAACTGGAGGCATTGTCGCCATATATTTCGCCAGCCAGTTCATGGCCAGCGCGCGCTCAATAGTGGATTGCTCAGCGGTCaaa < 2:401007/214‑1 (MQ=255) cTGCACATTTTGCGGCGATAATTCGTCACCAAA‑‑AGAGAGAATGTCCGGCACGCCCTGACCAACCCAACGCCAGTCTTCGCCCCCTCCAG‑TTAACTTCTGTTTAGCCCATGCGCCCGCAGGCGCAGGCAAAACAACTGGAGGCATTGTCGCCATATATTTCGCCAGCCAGTTCATGGCCAGCGCGCGCTCAATAGTGGATTGCTCAGCGGTCaaa > 1:401007/1‑214 (MQ=255) ggcgATAATTCGTCACCAAA‑‑AGAGAGAATGTCCGGCACGCCCTGACCAACCCAACGCCAGTCTTCGCCCCCTCCAG‑TTAACTTCTGTTTAGCCCATGCGCCCGCAGGCGCAGGCAAAACAACTGGAGGCATTGTCGCCATATATTTCGCCAGCCAGTTCATGGCCAGCGCGCGCTCAATAGTGGATTGCTCAGCGGTCAAACCACTTAAAATAGCGGCCGTCTGGGTAGCGTCGCCAc < 2:667212/238‑1 (MQ=255) ggcgAGAATTCGTCACCAAA‑‑AGAGAGAATGTCCGGCACGCCCTGACCAACCCAACGCCAGTCTTCGCCCCCTCCAG‑TTAACTTCTGTTTAGCCCATGCGCCCGCAGGCGCAGGCAAAACAACTGGAGGCATTGTCGCCGTATATTTCGCCAGCCAGTTCATGGCCAGCGCGCGCTCAATAGTGGATTGCTCAGCGGTCAAACCACTTAAAATAGCGGCCGGCTGGGTAGCGTCGCCAc < 1:551955/238‑1 (MQ=255) ggccATAATTCGGACCCAAA‑‑AGGGCAAATGCCCGGCCAGCCCGGACCAACCCAACGCCAGTCTTCGCCCCCTCCAG‑TTAACTTCTGTTTAGCCCATGCGCCCGCAGGCGCAGGCAAAACAACTGGAGGCATTGTCGCCATATATTTCGCCAGCCAGTTCATGGCCAGCGCGCGCTCAATAGTGGATTGCTCAGCGGTCAAACCACTTAAAATAGCGGCCGTCTGGGTAGCGTCGCCAc < 2:211364/238‑1 (MQ=255) tCACCAAA‑‑AGAGAGAATGTCCGGCACGCCCTGACCAACCCAACGCCAGTCTTCGCCCCCTCCAG‑TTAACTTCTGTTTAGCCCATGCGCCCGCAGGCGCAGGCAAAACAACTGGAGGCATTGTCGCCATATATTTCgccagcc < 1:244942/142‑1 (MQ=255) tCACCAAA‑‑AGAGAGAATGTCCGGCACGCCCTGACCAACCCAACGCCAGTCTTCGCCCCCTCCAG‑TTAACTTCTGTTTAGCCCATGCGCCCGCAGGCGCAGGCAAAACAACTGGAGGCATTGTCGCCATATATTTCgccagcc > 2:244942/1‑142 (MQ=255) gccAAA‑‑AGAGACAAGGTCCGGCACGCCCTGACCACCCCAACGCCATTCTTCGCCCCCTCCAG‑TTAACTTCTGTTTAGCCCATGCGCCCGCAGGCGCAGGCAAAACAACTGGAGGCATTGTCGCCATATATTTCGCCAGCCAGTTCATGGCCAGCGCGCGCTCAATAGTGGATTGCTCAGCGGTCAAACCACTTAAAATAGCGGCCGTCTGGGTAGCGTCGCCACCGCTATTAAgcagca < 2:407586/238‑1 (MQ=255) a‑‑aGAGAGAATGTCCGGCACGCCCTGACCAACCCAACGCCAGTCTTCGCCCCCTCCAG‑TTAACTTCTGTTTAGCCCATGCGCCCGCAGGCGCAGGCAAAACAACTGGAGGCATTGTCGCCATATATTTCGCCAGCCAGTTCATGGCCAGCGCGCGCTCAATAGTGGATTGCTCAGCGGTCAAACCACTTAAAATAGCGGCCGTCTGGGTAGCGTCGCCACCGCTATTAag > 1:871738/1‑229 (MQ=255) a‑‑aGAGAGAATGTCCGGCACGCCCTGACCAACCCAACGCCAGTCTTCGCCCCCTCCAG‑TTAACTTCTGTTTAGCCCATGCGCCCGCAGGCGCAGGCAAAACAACTGGAGGCATTGTCGCCATATATTTCGCCAGCCAGTTCATGGCCAGCGCGCGCTCAATAGTGGATTGCTCAACGGTCAAACCACTTAAAATAGCGGCCGTCTGGGTAGCGTCGCCACCGCTATTAag < 2:871738/229‑1 (MQ=255) aaTGTCCGGCACGCCCTGACCAACCCAACGCCAGTCTTCGCCCCCTCCAG‑TTAACTTCTGTTTAGCCCATGCGCCCGCAGGCGCAGGCAAAACAACTGGAGGCATTGTCGCCATATATTTCGCCAGCCAGTTCATGGCCAgcgcgcg < 2:722096/147‑1 (MQ=255) aaTGTCCGGCACGCCCTGACCAACCCAACGCCAGTCTTCGCCCCCTCCAG‑TTAACTTCTGTTTAGCCCATGCGCCCGCAGGCGCAGGCAAAACAACTGGAGGCATTGTCGCCATATATTTCGCCAGCCAGTTCATGGCCAgcgcgcg > 1:722096/1‑147 (MQ=255) aaTGTCCGGCACGCCCTGACCAACCCAACGCCAGTCTTCGCCCCCTCCAG‑TTAACTTCTGTTTAGCCCATGCGCCCGCAGGCGCAGGCAAAACAACTGGAGGCATTGTCGCCATATATTTCGCCAGCCAGTTCATGGCCAGCGCGCGCTCAATAGTGGATTGCTCAGCGGTCAAACCACTTAAAATATCGGCCGTCTGGGTAGCGTCGCCACCGCAATTAAGCAGATCAACCGTGTgc > 2:926893/1‑238 (MQ=255) tCCGGCACGCCCTGACCAACCCAACGCCAGTCTTCGCCCCCTCCAG‑TTAACTTCTGTTTAGCCCATGCGCCCGCAGGCGCAGGCAAAACAACTGGAGGCATTGTCGCCATATATTTCGCCAGCCAGTTCATGGCCAGCGCGCGCTCAATAGTGGa > 1:205446/1‑155 (MQ=255) tCCGGCACGCCCTGACCAACCCAACGCCAGTCTTCGCCCCCTCCAG‑TTAACTTCTGTTTAGCCCATGCGCCCGCAGGCGCAGGCAAAACAACTGGAGGCATTGTCGCCATATATTTCGCCAGCCAGTTCATGGCCAGCGCGCGCTCAATAGTGGa < 2:205446/155‑1 (MQ=255) cGGCACGCCCTGACCAACCCAACGCCAGTCTTCGCCCCCTCCAG‑TTAACTTCTGTTTAGCCCATGCGCCCGCAGGCGCAGGCAAAACAACTGGAg < 1:555479/95‑1 (MQ=255) cGGCACGCCCTGACCAACCCAACGCCAGTCTTCGCCCCCTCCAG‑TTAACTTCTGTTTAGCCCATGCGCCCGCAGGCGCAGGCAAAACAACTGGAg > 2:555479/1‑95 (MQ=255) gACCAACCCAACGCCAGTCTTCGCCCCCTCCAG‑TTAACTTCTGTTTAGCCCATGCGCCCGCAGGCGCAGGCAAAACAACTGGAGGCATTGTCGCCATATATTTCGCCAGCCAGTTCATGGCCAgcgcgcg > 2:215959/1‑130 (MQ=255) gACCAACCCAACGCCAGTCTTCGCCCCCTCCAG‑TTAACTTCTGTTTAGCCCATGCGCCCGCAGGCGCAGGCAAAACAACTGGAGGCATTGTCGCCATATATTTCGCCAGCCAGTTCATGGCCAgcgcgcg < 1:215959/130‑1 (MQ=255) aacccaacGCCAGTCTTCGCCCCCTCCAG‑TTAACTTCTGTTTAGCCCATGCGCCCGCAGGCGCAGGCAAAACAACTGGAGGCATTGTCGCCATATATTTCGCCAGCCAGTTCATGGCCAGCGCGCGCTCAATAGTGGATTGCTCAGCGGTCAAACCACTTAAAATAGCGGCCGTCTGGGTAGCGTCGCCACCGCTATTAAGCAGCACAACCGTGTGCGCCAGCGGCTGATTGCTGTTTg < 1:926893/239‑1 (MQ=255) aacccaacGCCAGCCCTCGCCCCCTCCAG‑TTAACTTTTGTTTACCCAATGCGCCCGAAGGCGCAGGCAAAACAACTGGAGGCATTGTCGCCATATATTTCGCCAGCCAGTTCATGGCCAGCGCGCGCTCAATAGTGGATTGCTCAGCGGTCAAACCACTTAAAATAGCGGCCGTCTGGGTAGCGTCGCCACCGCTATTAAGCAGCACAACCGTGTGCGCCAGCGGCTGATTGCTGTTTg < 2:281352/239‑1 (MQ=255) cccaacGCCAGTCTTCGCCCCCTCCAG‑TTAACTTCTGTTTAGCCCATGCGCCCGCAGGCGCAGGCAAAACAACTGGAGGCATTGTCGCCATATATTTCGCCAGCCAGTTCATGGCCAGCGCGCGCt < 2:506118/126‑1 (MQ=255) cccaacGCCAGTCTTCGCCCCCTCCAG‑TTAACTTCTGTTTAGCCCATGCGCCCGCAGGCGCAGGCAAAACAACTGGAGGCATTGTCGCCATATATTTCGCCAGCCAGTTCATGGCCAGCGCGCGCt > 1:506118/1‑126 (MQ=255) cccaacGCCAGTCTTCGCCCCCTCCAG‑TTAACTTCTGTTTAGCCCATGCGCCCGCAGGCGCAGGCAAAACAACTGGAGGCATTGTCGCCATATATTTCGCCAGCCAGTTCATGGCCAGCGCGCGCTCAATAGTGGATTGCTCAGCGGTCAAACCACTTAAAATAGCGGCCGt > 2:436552/1‑172 (MQ=255) cccaacGCCAGTCTTCGCCCCCTCCAG‑TTAACTTCTGTTTAGCCCATGCGCCCGCAGGCGCAGGCAAAACAACTGGAGGCATTGTCGCCATATATTTCGCCAGCCAGTTCATGGCCAGCGCGCGCTCAATAGTGGATTGCTCAGCGGTCAAACCACTTAAAATAGCGGCCGt < 1:436552/172‑1 (MQ=255) cGCCAGTCTTCGCCCCCTCCAG‑TTAACTTCTGTTTAGCCCATGCGCCCGCAGGCGCAGGCAAAACAACTGGAGGCATTGTCGCCATATATTTCGCCAGCCAGTTCATGGCCAGCGCGCGCTCAATAGTGGATTGCTCAGCGGTCAAACCACTTAAAATAGCGGCCGTCTGGGTAGCGTCGCCACCGCTATTAAGCAGCACAACCGTGTGCGCCAGCGGCTGATTGCTGATTGCCGCttt > 1:182437/1‑239 (MQ=255) ccAGTCTTCGCCCCCTCCAG‑TTAACTTCTGTTTAGCCCATGCGCCCGCAGGCGCAGGCAAAACAACTGGAGGCATTGTCGCCATATATTTCGCCAGCCAGTTCATGGCCAGCGCGCGCTCAATAGTGGATTGCTCAGCGGTCAAACCACTTAAAATAGCGGCCGTCTGGGTAGCGTCGCCACCGCTATTAAGCAGCACAACCGTGTGCGCCAGCGGCTGATTGCTGTTTGCCGCTTTAt < 2:829022/239‑1 (MQ=255) gTCTTCGCCCCCTCCAG‑TTAACTTCTGTTTAGCCCATGCGCCCGCAGGCGCAGGCAAAACAACTGGAGGCATTGTCGCCATATATTTCGCCAGCCAGTTCATGGCCAGCGCGCGCTCAATAGTGGATTGCTCAGCGGTCAAACCACTTAAAATAGCGGCCGTCTGGGTAGCGTCGCCACCGCTa > 2:230914/1‑184 (MQ=255) gTCTTCGCCCCCTCCAG‑TTAACTTCTGTTTAGCCCATGCGCCCGCAGGCGCAGGCAAAACAACTGGAGGCATTGTCGCCATATATTTCGCCAGCCAGTTCATGGCCAGCGCGCGCTCAATAGTGGATTGCTCAGCGGTCAAACCACTTAAAATAGCGGCCGTCTGGGTAGCGTCGCCACCGCTa < 1:230914/184‑1 (MQ=255) gTCTTCGCCCCCTCCAG‑TTAACTTCTGTTTAGCCCATGCGCCCGCAGGCGCAGGCAAAACAACTGGAGGCATTGTCGCCATATATTTCGCCAGCCAGTTCATGGCCAGCGCGCGCTCAATAGTGGATTGCTCAGCGGTCAAACCACTTAAAATAGCGGCCGTCTGGGTAGCGTCGCCACCGCTATTa < 2:215189/187‑1 (MQ=255) gTCTTCGCCCCCTCCAG‑TTAACTTCTGTTTAGCCCATGCGCCCGCAGGCGCAGGCAAAACAACTGGAGGCATTGTCGCCATATATTTCGCCAGCCAGTTCATGGCCAGCGCGCGCTCAATAGTGGATTGCTCAGCGGTCAAACCACTTAAAATAGCGGCCGTCTGGGTAGCGTCGCCACCGCTATTa > 1:215189/1‑187 (MQ=255) tCTTCGCCCCCTCCAG‑TTAACTTCTGTTTAGCCCATGCGCCCGCAGGCGCAGGCAAAACAACTGGAGGCATTGTCGCCATATATTTCGCCAGCCAGTTCATGGCCAGCGCGCGCTCAATAGTGGATTGCTCAGCGGTCAAACCACTTAAAATATCGGCCGTCTGGGTAGCGTCGCCACCGCTATTAAGCAGCACAACCGTGTGCGCCAGCGGCTGATTGCTGTTTGCCGCTTTATctc > 2:448652/1‑236 (MQ=255) cGCCCCCTCCAG‑TTAACTTCTGTTTAGCCCATGCGCCCGCAGGCGCAGGCAAAACAACTGGAGGCATTGTCGCCATATATTTCGCCAGCCAGTTCATGGCCAGCGCGCGCTCAATAGTGGATTGCTCAGCGGTCAAACCACTTAAAATAGCGGCCGTCTGGGTAGCGTCGCCACCGCTATTAAACAGCCAAACCTGGTGCGCCAGCGGCTGATTGCTGTTTTCTGCTTTATCCCACGCa > 2:409003/1‑239 (MQ=255) ccccccTTCAGATTAACTTCTGTTTAGCCCATGCGCCCGCAGGCGCAGGCAAAACAACTGGAGGCATTGTCGCCATATATTTCGCCAGCCAGTTCATGGCCAGCGCGCGCTCAATAGTGGATTGCTCAGCGGTCAAACCACTTAAAATAGCGGCCGTCTGGGTAGCGTCGCCACCGCTATTAAGCAGCACAACCGTGTGCGCCAGCGGCTGATTGCTGTTTGCCGCTTTATCCCACGCa < 2:182437/238‑1 (MQ=255) cTCCAG‑TTAACTTCTGTTTAGCCCATGCGCCCGCAGGCGCAGGCAAAACAACTGGAGGCATTGTCGCCATATATTTCGCCAGCCAGTTCATGGCCAGCGCGCGCTCAATAGTGGATTGCTCa > 2:350864/1‑122 (MQ=255) cTCCAG‑TTAACTTCTGTTTAGCCCATGCGCCCGCAGGCGCAGGCAAAACAACTGGAGGCATTGTCGCCATATATTTCGCCAGCCAGTTCATGGCCAGCGCGCGCTCAATAGTGGATTGCTCa < 1:350864/122‑1 (MQ=255) cTCCAG‑TTAACTTCTGTTTAGCCCATGCGCCCGCAGGCGCAGGCAAAACAACTGGAGGCATTGTCGCCATATATTTCGCCAGCCAGTTCATGGCCAGCGCGCGCTCAATAGTGGATTGCTCAGCGGTCAAACCACTTAAAATAGCg < 2:292353/146‑1 (MQ=255) cTCCAG‑TTAACTTCTGTTTAGCCCATGCGCCCGCAGGCGCAGGCAAAACAACTGGAGGCATTGTCGCCATATATTTCGCCAGCCAGTTCATGGCCAGCGCGCGCTCAATAGTGGATTGCTCAGCGGTCAAACCACTTAAAATAGCg > 1:292353/1‑146 (MQ=255) cTCCAG‑TTAACTTCTGTTTAGCCCATGCGCCCGCAGGCGCAGGCAAAACAACTGGAGGCATTGTCGCCATATATTTCGCCAGCCAGTTCATGGCCAGCGCGCGCTCAATAGTGGATTGCTCAGCGGTCAAACCACTTAAAATAGCGGCCGTCTGGGGAGCGTCGCCACCGCTATTAAGCAGCACAACCGTGGGCGCCCGCGGCCGATTGCTGGTTGCCGCTTTATCCCACGccactt > 2:74875/1‑232 (MQ=255) | ACCGGTTGCAGAATAAAGCTCATCTCTTCTTCACCAGGGATAAGCCGATACAACTGGCGTTCAACGGTCACCGGAATGTTACTTTGTTGAGCCATTTTTGCCGGCTCACGTCAGCGGACCTGCACATTTTGCGGCGATAATTCGTCACCAAA‑‑AGAGAGAATGTCCGGCACGCCCTGACCAACCCAACGCCAGTCTTCGCCCCCTCCAG‑TTAACTTATGTTTAGCCCATGCGCCCGCAGGCGCAGGCAAAACAACTGGAGGCATTGTCGCCATATATTTCGCCAGCCAGTTCATGGCCAGCGCGCGCTCAATAGTGGATTGCTCAGCGGTCAAACCACTTAAAATAGCGGCCGTCTGGGTAGCGTCGCCACCGCTATTAAGCAGCACAACCGTGTGCGCCAGCGGCTGATTGCTGTTTGCCGCTTTATCCCACGCATATT > NC_000913/2330189‑2330627 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |