| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 1,995,398 | IS5 (–) +4 bp | intergenic (‑39/‑417) | uvrY ← / → yecF | response regulator in two‑component regulatory system with BarA/DUF2594 family protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1995398 = | 18 (0.100) | 112 (0.620) | 74/198 | 2.2 | 85.7% | intergenic (‑39/‑420) | uvrY/yecF | response regulator in two‑component regulatory system with BarA/DUF2594 family protein |
| ? | NC_000913 | = 2290113 | NA (NA) | noncoding (1/1195 nt) | IS5 | repeat region | |||||
| * | ? | NC_000913 | = 1995401 | 18 (0.100) | 135 (0.750) | 81/198 | 1.5 | 87.8% | intergenic (‑42/‑417) | uvrY/yecF | response regulator in two‑component regulatory system with BarA/DUF2594 family protein |
| ? | NC_000913 | 2101749 = | NA (NA) | noncoding (1195/1195 nt) | IS5 | repeat region | |||||
Only 100 of 268 total aligned reads displayed.
ATGCGTCGTATCCCTGCGCGCACCAGTTCGTGGTCATCAACAAGTAGAACGTTGATCAAAGGAATATCTCCAGAAATAGGGATAACGCTACTGATAGTTAGTCATTCGTATATTAGCGGTTTTTATTGCAACTTTGAAACGTTAAAAATGGTGGGTATTCGATTTTTCTCTCGTTTTTGTCAATTCGATTGTCCAC > NC_000913/1995301‑1995496 | aTGCGTCGTATCCCTGCGCGCACCAGTTCGTGGTCATCAACAAGTAGAACGTTGATCAAAGGAATATCTCCAGAAATAGGGATAACGCTACTGAtagtta > 2:1523680/1‑100 (MQ=255) gtATCCCTGCGCGCACCAGTACGTGGTCATCAACAAGTAGAACGTTGATCAAAGGAATATCTCCAGAAACAGGGATAAAGCAACTGATAGTTAGggaagg < 2:2141720‑M1/100‑7 (MQ=255) aggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTCATTCGta > 1:1177959‑M1/88‑100 (MQ=255) ngtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTCATTCGtat < 1:3626782‑M1/14‑1 (MQ=255) ggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTCATTCGtat < 2:2949181‑M1/14‑1 (MQ=255) cccTGCGCGCACCAGTTCGTGGTCATCAACAAGTAGAACGTTGATCAAAGGAATATCTCCAGAAATAGGGATAACGCTACTGATAGTTAGggaaggtgcg > 1:3476557‑M1/1‑90 (MQ=255) cccTGCGCGCACCAGTTCGTGGTCATCAACAAGTAGAACGTTGATCAAAGGAATATCTCCAGAAATAGGGATAACGCTACTGATAGTTAGggaaggtgcg < 1:1774482‑M1/100‑11 (MQ=255) cccTGCGCGCACCAGTTCGTGGTCATCAACAAGTAGAACGTTGATCAAAGGAATATCTCCAGAAATAGGGATAACGCTACTGATAGTTAGggaaggtgcg < 2:1684521‑M1/100‑11 (MQ=255) gtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTCATTCGtata > 2:2852546‑M1/86‑100 (MQ=255) ccTGCGCGCACCAGTTCGTGGTCATCAACAAGTAGAACGTTGATCAAAGGAATATCTCCAGAAATAGGGATAACGCTACTGATAGTTAGggaaggtgcga > 1:4158865‑M1/1‑89 (MQ=255) ccTGCGCGCACCAGTTCGTGGTCATCAACAAGTAGAACGTTGATCAAAGGAATATCTCCAGAAATAGGGATAACGCTACTGATAGTTAGggaaggtgcga > 2:1295944‑M1/1‑89 (MQ=255) agttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTCATTCGTATATTa < 2:2577405‑M1/18‑1 (MQ=255) gttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTCATTCGTATATTAg < 1:480837‑M1/19‑1 (MQ=255) tgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTCATTCGTATATTAGCg < 2:3188953‑M1/21‑1 (MQ=255) tgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTCATTCGTATATTAGCg < 2:4397762‑M1/21‑1 (MQ=255) cgcACCAGTTCGTGGTCATCAACAAGTAGAACGTTGATCAAAGGAATATCTCCAGAAATAGGGATAACGCTACTGATAGTTAGggaaggtgcgaataagc > 1:4447093‑M1/1‑83 (MQ=255) gatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTCATTCGTATATTAGCgg < 1:2497423‑M1/22‑1 (MQ=255) gatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTCATTCGTATATTAGCgg < 2:4238924‑M1/22‑1 (MQ=255) cACCAGTTCGTGGTCATCAACAAGTAGAACGTTGATCAAAGGAATATCTCCAGAAATAGGGATAACGCTACTGATAGTTAGggaaggtgcgaataagcgg > 1:1517696‑M1/1‑81 (MQ=255) cAGTTCGTGGTCATCAACAAGTAGAACGTTGATCAAAGGAATATCTCCAGAAATAGGGATAACGCTACTGATAGTTAGTCATTCGTATATTAGCGGtttt < 1:233177/100‑1 (MQ=255) actcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatgagggacttgttcgcaccttccTTAGTCATTCGTATATTAGCGGtttt > 2:540465‑M1/75‑100 (MQ=255) ngtTCGTGGTCATCAACAAGTAGAACGTTGATCAAAGGAATATCTCCAGAAATAGGGATAACGCTACTGATAGTTAGggaaggtgcgaataagcggggaa > 2:4028161‑M1/2‑77 (MQ=255) ctcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTCATTCGTATATTAGCGGttttt > 2:710617‑M1/74‑100 (MQ=255) tcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTCATTCGTATATTAGCGGTTTTTa > 2:4250735‑M1/73‑100 (MQ=255) gTTCGTGGTCATCAACAAGTAGAACGTTGATCAAAGGAATATCTCCAGAAATAGGGATAACGCTACTGATAGTTAGTCATTCGTATATTAGCGGTTTTTa > 1:3351597/1‑100 (MQ=255) catgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTCATTCGTATATTAGCGGTTTTTAt > 1:1468075‑M1/72‑100 (MQ=255) tgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTCATTCGTATATTAGCGGTTTTTATTg < 2:1089443‑M1/31‑1 (MQ=255) tgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTCATTCGTATATTAGCGGTTTTTATTg > 1:4063605‑M1/70‑100 (MQ=255) tgatgaaccatgttctatggctccagatgacaaacatgatctcatatcagggacgtgttcgcaccttccTTAGTCATTCGTATATTAGCGGTTTTTATTg < 2:2627662‑M1/31‑1 (MQ=255) ggTCATCAACAAGTAGAACGTTGATCAAAGGAATATCTCCAGAAATAGGGATAACGCTACTGATAGTTAGggaaggtgcgaataagcggggaaattcttc < 2:1255385‑M1/100‑31 (MQ=255) tcatcaACAAGTAGAACGTTGATCAAAGGAATATCTCCAGAAATAGGGATAACGCTACTGATAGTTAGggaaggtgcgaataagcggggaaattcttctc > 2:2207779‑M1/1‑68 (MQ=255) catcaACAAGTAGAACGTTGATCAAAGGAATATCTCCAGAAATAGGGATAACGCTACTGATAGTTAGggaaggtgcgaataagcggggaaattcttctcg < 2:3798037‑M1/100‑34 (MQ=255) atcaACAAGTAGAACGTTGATCAAAGGAATATCTCCAGAAATAGGGATAACGCTACTGATAGTTAGTCATTCGTATATTAGCGGTTTTTATTGCAACttt > 1:2854903/1‑100 (MQ=255) tgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCCATTCGTATATTAGCGGTTTTTATTGCAACTTTGaa < 1:1235232‑M1/41‑1 (MQ=255) aacaaGTAGAACGTTGATCAAAGGAATATCTCCAGAAATAGGGATAACGCTACTGATAGTTAGggaaggtgcgaataagcggggaaattcttctcggctg > 2:3780201‑M1/1‑63 (MQ=255) ctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTCATTCGTATATTAGCGGTTTTTATTGCAACTTTGAAACGt < 2:1153412‑M1/45‑1 (MQ=255) aGTAGAACGTTGATCAAAGGAATATCTCCAGAAATAGGGATAACGCTACTGATAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactc < 1:2749071‑M1/100‑42 (MQ=255) aGTAGAACGTTGATCAAAGGAATATCTCCAGAAATAGGGATAACGCTACTGATAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactc > 1:3694136‑M1/1‑59 (MQ=255) tatggctccagatgacaaacatgatctcatatcagggactttttcgcaccttccTTAGTCATTCGTATATTAGCGGTTTTTATTGCAACTTTGAAACGtt > 2:1172009‑M1/55‑100 (MQ=255) ttgaaCGTTGATCAAAGGAATATCCCCAGAAATAGGAATAACGCTACTGATAGTTAGggaaggtgcgaataagcggggaaattcttcgctgctgactcag < 2:2966215‑M1/98‑44 (MQ=255) atggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTCGTCATTCGTATATTAGCGGTTTTTATTGCAACTTTGAAACGTTa < 1:3146192‑M1/47‑1 (MQ=255) aGAACGTTGATCAAAGGAATATCTCCAGAAATAGGGATAACGCTACTGATAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagt > 1:2396386‑M1/1‑56 (MQ=255) gAACGTTGATCAAAGGAATATCTCCAGAAATAGGGAAAACGCTACTGATAGTTAGTCATTCGTATATTAGCGGTTTTTATTGCAACTTTGAAACGTTaaa > 2:4212187/1‑100 (MQ=255) gctccagatgaaaaagatgatctcatatcaggtacttgttagcaccttccTTAGTCATTCGTATATTAGCGGTTTTTATTGCAACTTTGAATCGTTaaaa > 2:1331504‑M1/51‑100 (MQ=255) cGTTGATCAAAGGAATATCTCCAGAAATAGGGATAACGCTACTGATAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatt > 2:3043108‑M1/1‑52 (MQ=255) cGTTGATCAAAGGAATATCTCCAGAAATAGGGATAACGCTACTGATAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatt > 2:1767804‑M1/1‑52 (MQ=255) ccagatgacaaacatgatctcatatcagggacttgttcgcaccttccATAGTCATTCGTATATTAGCGGTTTTTATTGCAACTTTGAAACGTTAAAAAtg < 2:928004‑M1/53‑1 (MQ=255) ttGATCAAAGGAATATCTCCAGAAATAGGGATAACGCTACTGATAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttc < 1:77866‑M1/100‑51 (MQ=255) tGATCAAAGGAATATCTCCAGAAATAGGGATAACGCTACTGATAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttca > 2:3348468‑M1/1‑49 (MQ=255) tGATCAAAGGAATATCTCCAGAAATAGGGATAACGCTACTGATAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttca < 2:1402028‑M1/100‑52 (MQ=255) atgacgaacatgatctcatatcagggacttgttctctccttccTTAGTCATTCGTATATTAGCGGTTTTTATTGCAACTTTGAAACGTTAAAAAtggtgg > 2:2744218‑M1/44‑100 (MQ=255) tgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTCATTCGTATATTAGCGGTTTTTATTGCAACTTTGAAACGTTAAAAATGGTggg > 1:3190189‑M1/43‑100 (MQ=255) tgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTCATTCGTATATTAGCGGTTTTTATTGCAACTTTGAAACGTTAAAAATGGTggg > 1:6989‑M1/43‑100 (MQ=255) tgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTCATTCGTATATTAGCGGTTTTTATTGCAACTTTGAAACGTTAAAAATGGTggg < 2:2066844‑M1/58‑1 (MQ=255) tCAAAGGAATATCTCCAGAAATAGGGATAACGCTACTGATAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcattt > 1:189137‑M1/1‑46 (MQ=255) cAAAGGAATATCTCCAGAAATAGGGATAACGCTACTGATAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttc < 2:1840950‑M1/100‑56 (MQ=255) cAAAGGAATATCTCCAGAAATAGGGATAACGCTACTGATAGTTAGTCATTCGTATATTAGCGGTTTTTATTGCAACTTTGAAACGTTAAAAATGGTGGGt > 1:3867291/1‑100 (MQ=255) aaGGAATATCTCCAGAAATAGGGATAACGCTACTGATAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttctt > 1:1608928‑M1/1‑43 (MQ=255) aaGGAATATCTCCAGAAATAGGGATAACGCTACTGATAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttctt < 1:572387‑M1/100‑58 (MQ=255) aGGAATATCTCCAGAAATAGGGATAACGCTACTGATAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttc < 2:1883570‑M1/100‑59 (MQ=255) ggAATATCTCCAGAAATAGGGATAACGCTACTGATAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttca > 2:2658901‑M1/1‑41 (MQ=255) aacatgatctcatatcagggacttgttcgcaccttccTTAGTCATTCGTATATTAGCGGTTTTTATTGCAACTTTGAAACGTTAAAAATGGTGGGTATTc < 2:1958305‑M1/63‑1 (MQ=255) ncatgatctcatatcagggacttgttcgcaccttccTTAGTCATTCGTATATTAGCGGTTTTTATTGCAACTTTGAAACGTTAAAAATGGTGGGTATTCg < 2:4002178‑M1/64‑1 (MQ=255) acatgatctcatatcagggacttgttcgcaccttccTTAGTCATTCGTATATTAGCGGTTTTTATTGCAACTTTGAAACGTTAAAAATGGTGGGTATTCg < 1:1973613‑M1/64‑1 (MQ=255) gatctcatatcagggacttgttcgcaccttccTTAGTCATTCGTATATTAGCGGTTTTTATTGCAACTTTGAAACGTTAAAAATGGTGGGTATTCGAttt < 1:611328‑M1/68‑1 (MQ=255) tctcatatcagggacttgttcgcaccttccTTAGTCATTCGTATATTAGCGGTTTTTATTGCAACTTTGAAACGTTAAAAATGGTGGGTATTCGAttttt < 1:3945309‑M1/70‑1 (MQ=255) ctcCAGAAATAGGGATAACGCTACTGATAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcattttatttcttcatgtttga > 1:938550‑M1/1‑34 (MQ=255) tcCAGAAATAGGGATAACGCTACTGATAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgag > 2:773333‑M1/1‑33 (MQ=255) ctcatatcagggacttgttcgcaccttccTTAGTCATTCGTATATTAGCGGTTTTTATTGCAACTTTGAAACGTTAAAAATGGTGGGTATTCGATTTTtc > 1:3799033‑M1/30‑100 (MQ=255) ctcatatcagggacttgttcgcaccttccTTAGTCATTCGTATATTAGCGGTTTTTATTGCAACTTTGAAACGTTAAAAATGGTGGGTATTCGATTTTtc > 2:478147‑M1/30‑100 (MQ=255) ccAGAAATAGGGATAACGCTACTGATAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagc < 2:2820397‑M1/100‑69 (MQ=255) gAAATAGGGATAACGCTACTGATAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccga > 1:2585749‑M1/1‑29 (MQ=255) atcagggacttgttcgcaccttccTTAGTCATTCGTATATTAGCGGTTTTTATTGCAACTTTGAAACGTTAAAAATGGTGGGTATTCGATTTTTCTCTCg > 1:2005762‑M1/25‑100 (MQ=255) gggacttgttcgcaccttccTTAGTCATTCGTATATTAGCGGTTTTTATTGCAACTTTGAAACGTTAAAAATGGTGGGTATTCGATTTTTCTCTCGtttt < 1:2075314‑M1/80‑1 (MQ=255) gggATAACGCTACTGATAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgatttttt < 1:3725132‑M1/100‑78 (MQ=255) ggATAACGCTACTGATAGTTAGTCATTCGTATATTAGCGGTTTTTATTGCAACTTTGAAACGTTAAAAATGGTGGGTATTCGATTTTTCTCTCGTTTTTg > 2:365076/1‑100 (MQ=255) gacttgttcgcaccttccTTAGTCATTCGTATATTAGCGGTTTTTATTGCAACTTTGAAACGTTAAAAATGGTGGGTATTCGATTTTTCTCTCGTTTTTg > 1:53327‑M1/19‑100 (MQ=255) gacttgttcgcaccttccTTAGTCATTCGTATATTAGCGGTTTTTATTGCAACTTTGAAACGTTAAAAATGGTGGGTATTCGATTTTTCTCTCGTTTTTg < 2:3909282‑M1/82‑1 (MQ=255) acttgttcgcaccttccTTAGTCATTCGTATATTAGCGGTTTTTATTGCAACTTTGAAACGTTAAAAATGGTGGGTATTCGATTTTTCTCTCGTTTTTGt > 2:454034‑M1/18‑100 (MQ=255) cttgttcgcaccttccTTAGTCATTCGTATATTAGCGGTTTTTATTGCAACTTTGAAACGTTAAAAATGGTGGGTATTCGATTTTTCTCTCGTTTTTGTc > 1:2667050‑M1/17‑100 (MQ=255) cttgttcgcaccttccTTAGACATTCGTATATTAGCGGTTTTTATTGCAACTTTGAAACGTTAAAAATGGTGGGTATTCGATTTTTCTCTCGTTTTTGTc < 1:3561906‑M1/84‑1 (MQ=255) aTAACGCTACTGATAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctc < 1:3026680‑M1/100‑81 (MQ=255) ttgttcgcaccttccTTAGTCATTCGTATATTAGCGGTTTTTATTGCAACTTTGAAACGTTAAAAATGGTGGGTATTCGATTTTTCTCTCGTTTTTGTCa > 2:2466016‑M1/16‑100 (MQ=255) tgttcgcaccttccTTAGTCATTCGTATATTAGCGGTTTTTATTGCAACTTTGAAACGTTAAAAATGGTGGGTATTCGATTTTTCTCTCGTTTTTGTCaa < 2:1616488‑M1/86‑1 (MQ=255) tgttcgcaccttccTTAGTCATTCGTATATTAGCGGTTTTTATTGCAACTTTGAAACGTTAAAAATGGTGGGTATTCGATTTTTCTCTCGTTTTTGTCaa > 2:3489268‑M1/15‑100 (MQ=255) gcgcaccttccTTAGTCATTCGTATATTAGCGGTTTTTATTGCAACTTTGAAACGTTAAAAATGGTGGGTATTCGATTTTTCTCTCGTTTTTGTCAATTc > 2:1052926‑M1/12‑100 (MQ=255) gCTACTGATAGTTAGggaaggtgcgaataagcggggatattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattatttctcccgta < 2:3515197‑M1/100‑86 (MQ=255) gCTACTGATAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgta > 1:2136851‑M1/1‑15 (MQ=255) cTACTGATAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaa > 1:1029643‑M1/1‑14 (MQ=255) tACTGATAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaa > 1:4104300‑M1/1‑13 (MQ=255) gcaccttccTTAGTCATTCGTATATTAGCGGTTTTTATTGCAACTTTGAAACGTTAAAAATGGTGGGTATTCGATTTTTTTTTCTTTTTTTTCAATTCGa < 2:836354‑M1/91‑1 (MQ=255) ccttccTTAGTCATTCGTATATTAGAGGTTTTTATTGCAACTTTGAAACGTTAAAAATGGTGGGTATTCGATTTTTCTCTCGTTTTTGTCAATTCGATTg > 2:4328384‑M1/7‑100 (MQ=255) ttccTTAGTCATTCGTATATTAGCGGTTTTTATTGCAACTTTGAAACGTTAAAAATGGTGGGTATTCGATTTTTCTCTCGTTTTTGTCAATTCGATTGTc > 1:4320265‑M1/5‑100 (MQ=255) tAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgcctt > 2:2719304‑M1/1‑7 (MQ=255) tAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgcctt < 1:4539268‑M1/100‑94 (MQ=255) tAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagcagattttttctcccgtaaatgcctt < 1:3421156‑M1/100‑94 (MQ=255) aGTTGGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgcttttttctcccgtaaatgccttg > 2:3809722‑M1/1‑6 (MQ=255) aGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttg < 1:2334878‑M1/100‑95 (MQ=255) aGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttg < 2:3994265‑M1/100‑95 (MQ=255) gTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttga > 2:536686‑M1/1‑5 (MQ=255) | ATGCGTCGTATCCCTGCGCGCACCAGTTCGTGGTCATCAACAAGTAGAACGTTGATCAAAGGAATATCTCCAGAAATAGGGATAACGCTACTGATAGTTAGTCATTCGTATATTAGCGGTTTTTATTGCAACTTTGAAACGTTAAAAATGGTGGGTATTCGATTTTTCTCTCGTTTTTGTCAATTCGATTGTCCAC > NC_000913/1995301‑1995496 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |