Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,781,1520AG20.4% 282.5 / 19.7 144intergenic (+135/‑63)lldD/trmLL‑lactate dehydrogenase, FMN‑linked/tRNA Leu mC34,mU34 2'‑O‑methyltransferase, SAM‑dependent
Reads supporting (aligned to +/- strand):  ref base A (87/26);  new base G (0/29);  total (88/56)
Fisher's exact test for biased strand distribution p-value = 2.61e-15
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.96e-01
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 145 total aligned reads displayed.

GGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGA‑AAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCG  >  NC_000913/3781054‑3781250
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ggAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAg                                                                                                    <  1:2927438/100‑1 (MQ=255)
ggAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAg                                                                                                    <  2:4022493/100‑1 (MQ=255)
 gagaGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAgg                                                                                                   <  2:636779/100‑1 (MQ=255)
   gagGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACAGCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAgggg                                                                                                 >  2:4199620/1‑100 (MQ=255)
    agGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGa                                                                                                <  1:1843845/100‑1 (MQ=255)
     ggggACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGGC‑GGGGGGTTGGGa‑a                                                                                              >  2:2025416/1‑100 (MQ=255)
     ggggACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGa‑a                                                                                              >  2:685987/1‑100 (MQ=255)
     ggggACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGa‑a                                                                                              >  1:3054699/1‑100 (MQ=255)
     ggggACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGa‑a                                                                                              >  2:4178128/1‑100 (MQ=255)
      gggACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGGGGGCC‑AGGGTGAGGGGa‑aa                                                                                             <  2:1111180/100‑1 (MQ=255)
          ccGTTCGGCGCTGTATGTACTCCCTCCCTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGA‑AAAGGc                                                                                         <  2:2764469/100‑1 (MQ=255)
          ccGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGA‑AAAGGc                                                                                         >  2:784344/1‑100 (MQ=255)
           cGTTGGGCGATGTATTTACCCCCACACTCGGAACCAACACCGCACTCTTTTTTTCTCCCTCGCCCCTCGGGGGAGAGGGCC‑GGGGGGAGGGGA‑AAAGGcc                                                                                        <  1:3587682/100‑1 (MQ=25)
            gTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGA‑AAAGGCCg                                                                                       >  2:2281370/1‑100 (MQ=255)
            gTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGA‑AAAGGCCg                                                                                       >  1:1717139/1‑100 (MQ=255)
            gTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGCCC‑GGGGTGAGGGGA‑AAACGCCg                                                                                       >  2:3843057/1‑100 (MQ=255)
               gggCGCTGTTTGTCCTCCCTCACGCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGGGGGGGCC‑GGGGGGGGGGGA‑AAAGGCCGCAc                                                                                    <  1:30611/99‑1 (MQ=255)
               cGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTTGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGA‑AAAGGCCGCAc                                                                                    >  2:4124043/1‑100 (MQ=255)
                ngcgcTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGA‑AAAGGCCGCACt                                                                                   >  1:1718862/2‑100 (MQ=255)
                   gcTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGA‑AAAGGCCGCACTGCt                                                                                >  1:3394637/1‑100 (MQ=255)
                    cTGTTTGTCCCCCCTCCCCCTGAACCGACACCGCCCTTTTTTTTTCCCCCTCGCCCCTCGGGGGGGGGGGCG‑GGGGGGGGGGGA‑AAAGGCCGCACTGCTc                                                                               <  2:4487815/100‑1 (MQ=255)
                    cTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGA‑AAAGGCCGCACTGCTc                                                                               >  1:230213/1‑100 (MQ=255)
                      gtatgtaCTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGTGGGCC‑GGGGTGAGGGGA‑AAAGGCCGCACTGCTCAc                                                                             >  1:1308735/1‑100 (MQ=255)
                      gtatgtaCTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGA‑AAAGGCCGCACTGCTCAc                                                                             >  2:2261287/1‑100 (MQ=255)
                      gtatgtaCTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGA‑AAAGGCCGCACTGCTCAc                                                                             >  1:2896025/1‑100 (MQ=255)
                        atgtaCTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGA‑AAAGGCCGCACTGCTCACCa                                                                           >  1:4423149/1‑100 (MQ=255)
                         tgtaCTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGA‑AAAGGCCGCACTGCTCACCaa                                                                          >  2:3651626/1‑100 (MQ=255)
                         tgtaCTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGA‑AAAGGCCGCACTGCTCACCaa                                                                          >  1:1145050/1‑100 (MQ=255)
                          gtaCTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGA‑AAAGGCCGCACTGCTCACCAAt                                                                         >  1:1796731/1‑100 (MQ=255)
                           taCTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCTGGGTGAGGGCC‑GGGGTGAGGGGA‑AAAGGCCGCACTGCTCACCAAtt                                                                        >  2:2459390/1‑100 (MQ=255)
                            aCTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGA‑AAAGGCCGCACTGCTCACCAAttt                                                                       >  2:1591806/1‑100 (MQ=255)
                             cTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGA‑AAAGGCCGCACTGCTCACCAAtttt                                                                      >  2:3740799/1‑100 (MQ=255)
                             cTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGA‑AAAGGCCGCACTGCTCACCAAtttt                                                                      >  1:2344695/1‑100 (MQ=255)
                               ccccCACTCGGAAACGACCCCGCCCTTTTTTTTTCCCCCCCCCCCCCCGGGGGGGGGGGCG‑GGGGGGGGGGGA‑AAAGGCCGCACTGCTCACCAATTTTCt                                                                    <  1:1907307/100‑1 (MQ=255)
                               cccTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGA‑AAAGGCCGCACTGCTCACCAATTTTCt                                                                    >  2:1198121/1‑100 (MQ=255)
                               cccTCACTCGGAAACGCCCCCGCCCTTTTTTTTTCTCCCCCCCCCCCCCGGGGGGGGGGCC‑GGGGGGAGGGAA‑AAAGGCCGCACTGCTCACCAATTTTCt                                                                    <  1:1110393/100‑1 (MQ=255)
                                ccTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGA‑AAAGGCCGCACTGCTCACCAATTTTCTg                                                                   >  1:1321631/1‑100 (MQ=255)
                                ccTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGA‑AAAGGCCGCACTGCTCACCAATTTTCTg                                                                   >  2:3433885/1‑100 (MQ=255)
                                 cccACGCTGAACGGACCCCGCCTTCTTTTTTTCTCCCTCGCCCCTCCGGGGGGGGGGCC‑GGGGTGGGGGGA‑AAAGGCCGCACTGCTCACCAATTTTCTGc                                                                  <  2:309486/98‑1 (MQ=255)
                                 cTCCCTCTGAAACGACCCCGCCCTCTTTTTTCCTCCCTCCCCCCCCGGGGGGGAGGGCG‑GGGGGGGGGGGA‑AAAGGCCGCACTGCTCACCAATTTTCTGc                                                                  <  1:2638642/100‑1 (MQ=255)
                                 cTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGA‑AAAGGCCGCACTGCTCACCAATTTTCTGc                                                                  >  1:2622596/1‑100 (MQ=255)
                                 cTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGA‑AAAGGCCGCACTGCTCACCAATTTTCTGc                                                                  >  1:2964056/1‑100 (MQ=255)
                                     ctctGAAACGACACCGCACTCTTTTTTTTTTTCTTGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGA‑AAAGGCCGCACTGCTCACCAATTTTCTGCTATc                                                              >  2:3677460/1‑100 (MQ=255)
                                       ctGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGA‑CAAGGCCGCACTCCTCCCACACTTTCTGCTATCCt                                                            >  1:3872675/1‑100 (MQ=37)
                                       ctGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGA‑AAAGGCCGCACTGATAACCAATTTTCTGCTAtaat                                                            >  1:4566004/1‑97 (MQ=255)
                                        tGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGA‑AAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTg                                                           >  1:2308415/1‑100 (MQ=255)
                                          aaaCGACACCGCACTCTTTTTTTCTTTTTTTCTCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGA‑AAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGcc                                                         >  2:2876228/1‑100 (MQ=255)
                                            aCGACCCCGCTCTTTTTTTTCCCCCCACCCCCCGCCGGGGGGGGGGCG‑GGGGTGGGGGCA‑AAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGcccc                                                       <  1:4428084/100‑1 (MQ=255)
                                            aCGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGA‑AAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGcccc                                                       >  2:2703375/1‑100 (MQ=255)
                                             cGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAAACGGCC‑GGGGTGAGGGGA‑AAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGccccc                                                      >  2:3641176/1‑100 (MQ=255)
                                               acacCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGA‑AAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGc                                                    >  2:4018813/1‑100 (MQ=255)
                                                atcagCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGA‑AAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCa                                                   >  1:2814663/5‑100 (MQ=255)
                                                  ccGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGA‑AAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACt                                                 >  1:1524264/1‑100 (MQ=255)
                                                  ccGCACTCTTTTTTTCTCCCTCCCCCCTCGGGGGGGAGGGCC‑GGGGGGCGGGGA‑AAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACt                                                 <  1:4401733/100‑1 (MQ=255)
                                                     cACTCTTTTTTTCTCTTTCTCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGA‑AAAGGCCGCACTGCTCAACAATTTTCTGCTATCCTGCCCCCGCACTaat                                              >  2:1725068/1‑99 (MQ=39)
                                                       ctctTTTTTTTTCTCCCGGCCCTCCGGGGAGAGGGCC‑GGGGCAATGGGA‑GAAGTCCGCTGTGCACACCGATTTTTTGCTATCCTGCCCCCGCAGTAAagg                                            >  2:1998674/1‑100 (MQ=255)
                                                       ctctTTTTTTCTCCCCCGCCCCCCCGGGGGGAGGGCC‑GGGGTGGGGGGA‑AAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAggg                                            <  2:2650456/100‑1 (MQ=255)
                                                       ccttttttttCCCCCCCCCCCCCGGGGGGGGGGGGGC‑GGGGGGGGGGGA‑AAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAggg                                            <  1:3478206/97‑1 (MQ=255)
                                                        tctTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGA‑AAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAgggg                                           >  1:1429067/1‑100 (MQ=255)
                                                        cctTTTTTCCCCCCCCCCCCCCCCGGGGGGGGGGCG‑GGGGGGGGGGGA‑AAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAgggg                                           <  2:4131813/99‑1 (MQ=255)
                                                         ctTTTTTTTTTCCTTTTCCCTCCGGTGAGAGGGCC‑GGGGTGAGGGGA‑GAAGGTCGCGCTGCTTACCAATTTTCTCCTCTCCTGCCCCCGCTCTAAgggtt                                          >  2:880651/1‑98 (MQ=255)
                                                         ctTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGA‑AAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAggggg                                          >  1:3885292/1‑100 (MQ=255)
                                                          tttttttCCCCCCCCCCCCCCGGGGGAGGGGGCG‑GGGGGAAGGGCA‑AAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGc                                         <  1:985115/100‑1 (MQ=255)
                                                           ttttttCCCCCCCCCCCCCCGGGGGAGGGGGCC‑GGGGGGAGGGAA‑AAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCa                                        <  1:116439/100‑1 (MQ=255)
                                                              ttccccccTCCCCCCCCGGGGGAGAGGGCG‑GGGGTGGGGGGA‑AAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTa                                     <  1:1669542/95‑1 (MQ=255)
                                                                tcccccTCCCCCCTCGGGGGGGGGGGCG‑GGGGGGGGGGGA‑AAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATg                                   <  1:4452651/97‑1 (MQ=255)
                                                                 ctcCCGGGCCCCTCGGGGGGGGGGGCG‑GGGGTGGGGGGA‑AAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGc                                  <  2:888098/100‑1 (MQ=255)
                                                                  tcCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGA‑AAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCt                                 >  2:4136993/1‑100 (MQ=255)
                                                                  gcccTCTCCCCGGAGGGGCGAGGGCC‑GGGGTGAGGGGA‑AAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCACCCGCACTAAGGGGGCAGTATGCt                                 >  2:2512379/2‑100 (MQ=255)
                                                                  cccccCGCCCCCCCGGGGAGGGGGCG‑GGGGGGGGGGGA‑AAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCt                                 <  1:4531105/99‑1 (MQ=255)
                                                                   cccTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGA‑AAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTa                                >  1:3304121/1‑100 (MQ=255)
                                                                    ccTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGA‑AAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTaa                               >  2:1904053/1‑100 (MQ=255)
                                                                    ccTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGA‑AAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTaa                               >  1:2017609/1‑100 (MQ=255)
                                                                    ccTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGA‑AAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACGACGGGGGCAGTATGCTaa                               >  2:3104202/1‑100 (MQ=255)
                                                                     cTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGA‑AAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTaaa                              >  2:1973078/1‑100 (MQ=255)
                                                                      tCGCCCCTCGGGGGAGGGGGCG‑GGGGTGGGGGGA‑AAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAAc                             <  1:2941949/100‑1 (MQ=255)
                                                                         ccccTCCGGGGAGGGGGCC‑GGGGGGGGGGGA‑AAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATc                          <  2:4433433/100‑1 (MQ=255)
                                                                          cccTCCGGGGAGAGGGCC‑GGGGTGAGGGGA‑AAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCg                         >  2:3963574/1‑100 (MQ=255)
                                                                           ccTCCGGGGAGAGGGCC‑GGGGTGAGGGGA‑AAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGt                        >  2:3290214/1‑100 (MQ=255)
                                                                            cTCGGGGGGGGGGGCG‑GGGGGGGGGGGA‑AAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTa                       <  1:2833560/100‑1 (MQ=255)
                                                                            cTCCGGGGAGAGGGCC‑GGGGTGAGGGGA‑AAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTa                       >  1:1182417/1‑100 (MQ=255)
                                                                                ggggAGAGGGGC‑GGGGTGAGGGAA‑AAAGGCCGAACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACttt                   <  2:2287151/100‑1 (MQ=255)
                                                                                ggggAGAGGGCC‑GGGGTGAGGGGA‑AAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACttt                   >  2:2111538/1‑100 (MQ=255)
                                                                                  ggggggggCCGGGGGGGAGGGAA‑AAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTa                  <  1:630007/95‑1 (MQ=255)
                                                                                  ggAGGGGGCG‑GGGGTGAGGGGA‑AAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTAc                 <  1:3722350/100‑1 (MQ=255)
                                                                                  ggAGAGGGCC‑GGGGTGAGGGGA‑AAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATTGTACTTTAc                 >  1:4474781/1‑100 (MQ=255)
                                                                                     gagGGCC‑GGGGTGAGGGGA‑AAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGaa              >  2:4068333/1‑100 (MQ=255)
                                                                                      agGGCC‑GGGGTGAGGGGA‑AAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAAc             >  1:2713863/1‑100 (MQ=255)
                                                                                       gggCG‑GGGGTGGGGGGA‑AAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAAcc            <  2:504370/100‑1 (MQ=255)
                                                                                       gggCC‑GGGGTGAGGGGA‑AAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAAcc            >  1:3158042/1‑100 (MQ=255)
                                                                                       gggCC‑GGGGTGAGGGGA‑AAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAAcc            >  2:1552021/1‑100 (MQ=255)
                                                                                        ggCC‑GGGGTGAGGGGA‑AAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCa           <  1:3802395/100‑1 (MQ=255)
                                                                                         gCC‑GGGGTGGGGGGA‑AAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTTCGAACCAg          <  2:4303146/100‑1 (MQ=255)
                                                                                         gCC‑GGGGTGAGGGGA‑AAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAg          >  2:819505/1‑100 (MQ=255)
                                                                                          gc‑GGGGGGGGGGGAGAAAGGCCGCACTGCGCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACTTCGTACTTTACGAACCAg          <  2:4453292/99‑1 (MQ=255)
                                                                                             ggggTGAGGGGA‑AAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGaaa       <  2:2873617/100‑1 (MQ=255)
                                                                                               ggTGAGGGGA‑AAAGGCCGCACTGCTCACCAATTGTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAAtt     <  1:4521510/100‑1 (MQ=255)
                                                                                                gTGAGGGGA‑AAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTc    >  1:2429687/1‑100 (MQ=255)
                                                                                                gTGAGGGGA‑AAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTc    <  2:2765263/100‑1 (MQ=255)
                                                                                                  gAGGGGA‑AAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCg  >  1:1109142/1‑100 (MQ=255)
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GGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGA‑AAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCG  >  NC_000913/3781054‑3781250

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑