BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1995401	2 (0.010)	117 (0.870)	81/196	0.4	98.3%	intergenic (‑42/‑417)	uvrY/yecF	response regulator in two‑component regulatory system with BarA/DUF2594 family protein
*	?	NC_000913	= 2102943	NA (NA)	117 (0.870)	81/196	0.4	98.3%	noncoding (1/1195 nt)	IS5	repeat region

Only 100 of 138 total aligned reads displayed.

CGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTAAAGATTTCGCTTCATCTCGGAACAGGCA  >  NC_000913/2102851‑2103041

cGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATc                                                                                              <  2:2569008/99‑1 (MQ=31)

cGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATc                                                                                              <  2:2023174/99‑1 (MQ=31)

 ggCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATcc                                                                                             >  1:1049089/1‑99 (MQ=32)

 ggCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATcc                                                                                             >  1:3359890/1‑99 (MQ=32)

  gCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATccc                                                                                            >  1:3189396/1‑99 (MQ=33)

  gCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATccc                                                                                            <  2:2878840/99‑1 (MQ=33)

  gCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATccc                                                                                            <  2:1615907/99‑1 (MQ=33)

     aaGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTGCGCACCTTCCTTAATCCCTaa                                                                                         <  1:2912290/99‑1 (MQ=37)

        gtcaGTTGATGACTCATGATGAACCCCGTTCTATGGCTCCAGATGACAAACATCATCCCATATCATGGCCTTGTTCGCACCTTCCTTAATCCCTAACAt                                                                                      >  2:1443205/4‑99 (MQ=14)

        gTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGAGCTCATAACAGGGACGTGCTCGCACCTTCCTTAATCCCCAACAt                                                                                      >  2:307963/1‑99 (MQ=11)

         tAAGTTGCTGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATa                                                                                     >  2:3285941/1‑99 (MQ=255)

         tAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATa                                                                                     >  1:1962703/1‑99 (MQ=255)

          aaGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATaa                                                                                    >  1:2560005/1‑99 (MQ=255)

            gTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAAt                                                                                  <  1:3059275/99‑1 (MQ=255)

               gatgaCTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGac                                                                               <  2:2401350/99‑1 (MQ=255)

               gatgaCTCATGATGAACCATGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCACTAACATAAATGac                                                                               >  2:3129823/1‑99 (MQ=255)

                atgaCTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGaca                                                                              <  1:2366736/99‑1 (MQ=255)

                atgaCTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGaca                                                                              <  1:147456/99‑1 (MQ=255)

                 tgaCTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGacac                                                                             <  2:2006637/99‑1 (MQ=255)

                     tCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATa                                                                         >  2:1806815/1‑99 (MQ=255)

                      cATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATaa                                                                        <  2:856641/99‑1 (MQ=255)

                        tgatgaACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATaaaa                                                                      >  1:488641/1‑99 (MQ=255)

                         gatgaACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAAt                                                                     <  2:530439/99‑1 (MQ=255)

                         gatgaACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAAt                                                                     <  2:530652/99‑1 (MQ=255)

                             aaCCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGa                                                                 >  2:576376/1‑99 (MQ=255)

                              aCCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGTACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGaa                                                                >  2:2422142/1‑99 (MQ=255)

                              aCCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGaa                                                                <  1:2470027/99‑1 (MQ=255)

                              aCCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGaa                                                                >  1:2105569/1‑99 (MQ=255)

                               cccTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATTACACAATAAAATCAGaaa                                                               >  2:3092465/1‑99 (MQ=255)

                               cccTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGaaa                                                               >  1:2885865/1‑99 (MQ=255)

                               cccTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGaaa                                                               <  2:2710281/99‑1 (MQ=255)

                                ccTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAg                                                              >  1:3378408/1‑99 (MQ=255)

                                ccTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAg                                                              >  2:2361769/1‑99 (MQ=255)

                                ccTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAg                                                              >  1:1386601/1‑99 (MQ=255)

                                ccTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAg                                                              >  2:1256709/1‑99 (MQ=255)

                                  tGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGca                                                            >  2:770739/1‑99 (MQ=255)

                                  tGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGca                                                            <  2:876996/99‑1 (MQ=255)

                                    ttCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGcaca                                                          <  1:2477397/99‑1 (MQ=255)

                                    ttCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGcaca                                                          >  1:1593729/1‑99 (MQ=255)

                                    ttCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGcaca                                                          >  2:1707668/1‑99 (MQ=255)

                                       tATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGa                                                       >  2:3166088/1‑99 (MQ=255)

                                         tGGCTCCAGATGACAAACATGATCTCATATCTGGGACATGTTCGCACCTTCCTTAATCCATAACATAAATGACACAATAGAATCAGAAAGCACAGGaaa                                                     >  1:3088762/1‑99 (MQ=21)

                                           gCTCCAGATGACAAACATGATTTCATAGCAGGGACTTGTTCTCACCTTCCTTAATCCCAAGCATACATGAGACCCTAAATTAAGAAATCACTGGAAAtt                                                   <  2:1457652/99‑1 (MQ=9)

                                             tCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAAtttt                                                 >  1:2588271/1‑99 (MQ=255)

                                              ccAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTc                                                <  2:3305277/99‑1 (MQ=255)

                                               cAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCt                                               <  2:1350574/99‑1 (MQ=255)

                                                aGATGACAAACATGATCTCATATCAGTGACTTTTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCtt                                              >  2:1573186/1‑99 (MQ=255)

                                                aGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCtt                                              >  1:3121915/1‑99 (MQ=255)

                                                 gATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTa                                             <  2:1561677/99‑1 (MQ=255)

                                                 gATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTa                                             >  1:2547045/1‑99 (MQ=255)

                                                   tGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACg                                           <  1:1650974/99‑1 (MQ=255)

                                                   tGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACg                                           <  2:79279/99‑1 (MQ=255)

                                                   tGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACg                                           <  2:3073165/99‑1 (MQ=255)

                                                   tGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACg                                           <  2:1006883/99‑1 (MQ=255)

                                                   tGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACg                                           <  1:480429/99‑1 (MQ=255)

                                                    gACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACgg                                          >  1:404813/1‑99 (MQ=255)

                                                     aCAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGa                                         <  2:1301455/99‑1 (MQ=255)

                                                      cAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGaa                                        >  1:3450213/1‑99 (MQ=255)

                                                       aaaCATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGaat                                       >  1:2855764/1‑99 (MQ=255)

                                                       aaaCATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGaat                                       >  2:323166/1‑99 (MQ=255)

                                                         aCATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGaataa                                     >  1:955988/1‑99 (MQ=255)

                                                          cATGATCTCATATCAGGGACTTTTTCGCACCTTCATTAATCCCTAACATAAATTACACAATAAAATCAGAAAACACAGGAAATTTTCTTACAGaataat                                    >  2:118511/1‑99 (MQ=37)

                                                          cATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGaataat                                    >  1:2612746/1‑99 (MQ=255)

                                                           ttGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATc                                   <  2:484679/98‑1 (MQ=255)

                                                           aTGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATc                                   <  2:2766614/99‑1 (MQ=255)

                                                             gATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAGGCACAGGAAATTTTCTTGCGGAATAATCAt                                 >  1:1736584/1‑99 (MQ=255)

                                                             gATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCAt                                 >  1:1962065/1‑99 (MQ=255)

                                                             gATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCAt                                 <  2:1479737/99‑1 (MQ=255)

                                                                   atatCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTAAAg                           >  2:2557184/1‑99 (MQ=255)

                                                                    tatCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTAAAGa                          >  1:430151/1‑99 (MQ=255)

                                                                       cAGGTACTTGTTCGCACCAACCATAATCCCTAACAAAAATTACACAATAAAATCCTAAAGAACTGAAAATTTTCTTACGGAATAATCATGTAAAGAttt                       <  2:1555284/99‑1 (MQ=255)

                                                                       cAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTAAAGAttt                       <  2:1801564/99‑1 (MQ=255)

                                                                       cAGGGACTTGTTCGCACCTTCCTTAATCCCGAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTAAAGAttt                       <  2:3077353/99‑1 (MQ=255)

                                                                        aGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTAAAGATTTc                      <  1:2940074/99‑1 (MQ=255)

                                                                        aGGGACTGGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTAAAGATTTc                      <  2:890520/99‑1 (MQ=255)

                                                                         ggtaCTTGTTAGGAGCTTACTTAAGCCGTAAAATAAATGGCAGATAAAGATCTGAGAGACCAGGAAAGTTTCTTACGCAATAATCATGTAAAGATTTCg                     <  2:1342446/96‑1 (MQ=255)

                                                                          ggACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTAAAGATTTCGc                    >  2:2704796/1‑99 (MQ=255)

                                                                          ggACTTGTTAGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTAAGGAATAATCATGTAAAGATTTCGc                    >  1:1208406/1‑99 (MQ=255)

                                                                           gACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTAAAGATTTCGCt                   <  2:3035488/99‑1 (MQ=255)

                                                                            aCTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTAAAGATTTCGCtt                  <  2:1940957/99‑1 (MQ=255)

                                                                             cTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGACAGCACAGGAAATTTTCTTACGGAATAATCATGTAAAGATTTCGCTTc                 <  1:518344/99‑1 (MQ=255)

                                                                              ttGTTCGCACCTGCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAAGCATGTAAAGATTTCGCTTCa                >  2:609414/1‑99 (MQ=255)

                                                                                 ttCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTAAAGATTTCGCTTCAtct             >  1:1087381/1‑99 (MQ=255)

                                                                                 ttCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTAAAGATTTCGCTTCAtct             >  1:1002133/1‑99 (MQ=255)

                                                                                 ttCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTAAAGATTTCGCTTCAtct             >  2:445376/1‑99 (MQ=255)

                                                                                 ttCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTAAAGATTTCGCTTCAtct             >  2:431802/1‑99 (MQ=255)

                                                                                 ttCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTAAAGATTTCGCTTCAtct             >  1:3479341/1‑99 (MQ=255)

                                                                                  tCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTAAAGATTTCGCTTCAtctc            >  1:1709881/1‑99 (MQ=255)

                                                                                   cGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTAAAGATTTCGCTTCATCTCg           >  2:2198153/1‑99 (MQ=255)

                                                                                      aCCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTAAAGATTTCGCTTCATCTCGGaa        >  1:2046889/1‑99 (MQ=255)

                                                                                      aCCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTAAAGATTTCGCTTCATCTCGGaa        >  2:2244430/1‑99 (MQ=255)

                                                                                        cttccttAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTAAAGATTTCGCTTCATCTCGGAACa      <  2:2615406/99‑1 (MQ=255)

                                                                                         ttccttAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTAAAGATTTCGCTTCATCTCGGAACAg     <  2:1147462/99‑1 (MQ=255)

                                                                                         ttccttAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTAAAGATTTCGCTTCATCTCGGAACAg     >  1:3164805/1‑99 (MQ=255)

                                                                                         ttccttAAGCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTAAAGATTTCGCTTCATCTCGGAACAg     <  2:426408/99‑1 (MQ=255)

                                                                                          tccttAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTAAAGATTTCGCTTCATCTCGGAACAgg    <  2:126480/99‑1 (MQ=255)

                                                                                          tccttAATCCCTAACATAAATGACACAATAAAATCAGAAAGCAAAGGAAATTTTGTTACGGAATAATCATGTACAGATTTGGCTTCATCTCGGAACacg    >  1:2949178/1‑97 (MQ=255)

                                                                                           ccttAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTAAAGATTTCGCTTCATCTCGGAACAGGc   >  1:1252208/1‑99 (MQ=255)

                                                                                           ccttAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTAAAGATTTCGCTTCATCTCGGAACAGGc   <  2:1081106/99‑1 (MQ=255)

                                                                                            cttAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATATTCATGTAAAGATTTCGCTTCATCTCGGAACAGGCa  >  2:2887402/1‑99 (MQ=255)

CGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTAAAGATTTCGCTTCATCTCGGAACAGGCA  >  NC_000913/2102851‑2103041

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.