| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,026,941 | 0 | A | C | 36.0% | 98.1 / 11.5 | 50 | E392D (GAA→GAC) | guaD | guanine deaminase |
| Reads supporting (aligned to +/- strand): ref base A (27/5); new base C (0/18); total (27/23) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.86e-09 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
TTAAAGTGGGCATGGGAACGGATATCGGTGCCGGAACCACTTTCAACATGCTGCAAACGCTGAACGAAGCCTACAAAGTATTGCAATTACAAGGCTATCGCCTCTCGGCATATGAAGCGTTTTACCTGGCCACGCTCGGCGGAGCGAAATCTCTGGGCCTTGACGATTTGATTGGCAACTTTTT‑ACCTGGCAAA‑GAGGC‑TGATTT‑CGTGGTGATGGAACCCACCGCCACTCCGCTACAGCAGCTGCGCTATGACAACTCTGTTTCTTTAGTCGACAAATTGTTCGTGATGATGACGTTGGGCGATGACCGTTCGATCTACCGCACCTACGTTGATGGTCGTCTGGTGTACGAACGCAACTAATAATAAAACTTTAACATCCTCGTGAGGACATCATTATGTCTGGAGACATCCTACAAACACCGGACGCACCAAAGC > NC_000913/3026724‑3027160 | taaaaGTGGGAATGGGAACGGATATGGGTGCCGAAACCACTTACAACATGCTGCAAACGCTGAACGAAGCATAAAAATTATTGCAATTACAAGGCTACCCCCTCTCGGAATATGAAGCTTTTTACCTGCCCACGCTCGGCGGAGCGAAATCTCTGGGCCTTGACGTTTTGATGGGCAATTTTTT‑CCCTGGAAAA‑GAGGC‑TGTTTT‑CGTGGTGAGGAAACCCACCGCCACTCCGCTAc < 1:598185/235‑1 (MQ=255) gggtcaggagAAGGGATATCGGTGCCGAAACCCATTTCAACATGCTCCAAACGCTAAACGAGGCCTAAAAATTATTGCAATTACAGGGCTTCCGCCTCTCGGCATATGAAGCGTTTTACCTGGCCACGCTGGGCGGAGCGAAATCTCTGGGCTTTGACGATTTGATTGGCAATTTTTT‑CCCTGGAAAA‑GAGGC‑TGATTT‑CGTGGTGAGGGACCCCACCGCCACTCCGCTACagcagc < 1:775929/228‑1 (MQ=255) gggAACGGATATCGGTGCCGGAACCACTTTCAACATGCTGCAAACGCTGAACGAAGCCTACAAAGTATTGCAATTACAAGGCTATCGCCTCTCGGCATATGAAGCGTTTTACCTGGCCACGCTCGGCGGAGCGAAATCTCTGGGCCTTGACGATTTGATTGGCAACTTTTT‑ACCTGGCAAA‑GAGGC‑TGATTT‑CGTGGTGATGGAACCCACCGCCACTCCGCTACAGCAGCTGCGCt > 1:1131767/1‑236 (MQ=255) ggATATCGGTGCCGGAACCACTTTCAACATGCTGCAAACGCTGAACGCAGCCTACAAAGTATTGCAATTACAAGGCTATCGCCTCTCGGCATATGAAGCGTTTTACCTGGCCACGCTCGGCGGAGCGAAATCTCTGGGCCTAGACGATTTGATCGGCAACTTTTT‑ACCTGCCACA‑GAGGC‑TGATTT‑CGTGGTGATGGAACCCACCGCCACTCCTCTACAGCAGCTGCGCTATGACAAc > 2:534909/1‑238 (MQ=255) gaattccGGTCCCGAAACCATTTCAAACATGCTGAAAACGTTAAACGAAGCCAAAAAAGTATTGCAATTACAGGGCTATCGCCTCTGGGAATAGGAGGTGTTTTACCGGGCCACGCTCGGGGGAGCGAAATCTCGGGGCCTTGACGTTTTGATTGGCATCTTTTT‑CCCTGGAAAA‑GGGGC‑TGTTTT‑GGGGGTGATGGACCCCACCGCCACTCCGCTACAGCAGCTGCGCTAt < 2:961409/226‑1 (MQ=255) gATATCGGGGCCGGACCCCTTTTCAAACTGCTCCAATCGCTGAACAAAGCCAAAAAATTATTGCAATTAAAAGCATCTCGCCTCGGGGCTTTTGAAGCTTTTTACCGGGCCACGCTCGGCGGAGCGAATCTTCTGGGCCTTGGCGATTTGATTGCCACCTTTTT‑CCCTGGCAAA‑GGGGG‑TGATTG‑CGTGGTGATGCACCCCACCGCCACTCCGCTACAGCAGCTGCGCTATGACAAc < 2:501492/237‑1 (MQ=255) gTGCCGGAACCACTTTCAACATGCTGCAAACGCTGAACGAAGCCTACAAAGTATTGCAATTACAAGGCTATCGCCTCTCGGCATATGAAGCGTTTTACCTGGCCACGCTCGGCGGAGCGAAATCTCTGGGCCTTGACGATTTGATTGGCAACTTTTT‑ACCTGGCAAA‑GAGGC‑TGATTT‑CGTGGTGATGGAACCCACCGCCACTCCGCTACAGCAGCTGCGCTATGACAAc > 1:863772/1‑230 (MQ=255) gCCGGAACCACTTTCAACATGCTGCAAACGCTGAACGAAGCCTACAAAGTATTGCAATTACAAGGCTATCGCCTCTCGGCATATGAAGCGTTTTACCTGGCCACGCTCGGCGGAGCGAAATCTCTGGGCCTTGACGATTTGATTGGCAACTTTTT‑ACCTGGCAAA‑GAGGC‑TGATTT‑CGTGGTGATGGAACCCACCGCCACTCCGCTACAGCAGCTGCGCTATGACAACTCTg > 1:961409/1‑232 (MQ=255) tgctgcAAACGCTGAACGAAGCCTACAAAGTATTGCAATTACAAGGCTATCGCCTCTCGGCATATGAAGCGTTTTACCTGGCCACGCTCGGCGGAGCGAAATCTCTGGGCCTTGACGATTTGATTGGCAACTTTTT‑ACCTGGCAAC‑GAGGC‑TGATTT‑CGTGGTGATGGAACCCACCGCCACTCCGCTACAGCAGCTGCGCTATGACAACTCTGTTTCTTTAGTCGACAAATTGTTCGtg > 2:969275/1‑239 (MQ=255) gataaaCGAAGCCAAAAAATTATTCCATTTACAAGGCTATCGCCTCTCGGCATAGGAAGGTTTTTCCCTGGCCCCCCTCGGCGGAGCAAAAGCTCGGGGCCTGGACGATTTGATTGGCAACTTTTT‑CCCGGGAAAA‑GAGGC‑TGATTT‑CGTGGTGATGGACCCCACCGCCACTCCGCTACAGCAGCTGCGCTATGACAACTCTGTTTCTTTAGTCGACAAATTGTTCGTGATGATGACGt < 1:430020/235‑1 (MQ=255) gAACGAAGCCTACAAAGTATTGCAATTACAAGGCTATCGCCTCTCGGCATATGAAGCGTTTTACCTGGCCACGCTCGGCGGAGCGAAATCTCTGGGCCTTGACGATTTGATTGGCAACTTTTT‑ACCTGGCAAA‑GAGGC‑TGATTT‑CGTGGTGATGGAACCCACCGCCACTCCGCTACAGCAGCTGCGCTATGACAACTCTGTTTCTTTAGTCGACAAATTGTTCGTGATGATGACGTTgg > 1:823406/1‑239 (MQ=255) aCAAAGTATTGCAATTACAAGGCTATCGCCTCTCGGCATATGAAGCGTTTTACCTGGCCACGCTCGGCGGAGCGAAATCTCTGGGCCTTGACGATTTGATTGGCAACTTTTT‑ACCTGGCAAA‑GAGGC‑TGATTT‑CGTGGTGATGGAACCCACCGCCACTCCGCTACAGCAGCTGCGCTATGACAACTCTGTTTCTTTAGTCGACAAATTGTTCGTGATGATGACGTTGGGCGATGACCGt > 1:55115/1‑239 (MQ=255) aCAAAGTATTGCAATTACAAGGCTATCGCCTCTCGGCATATGAAGCGTTTTACCTGGCCACGCTCGGCGGAGCGAAATCTCTGGGCCTTGACGATTTGATTGGCAACTTTTT‑ACCTGGCAAA‑GAGGC‑TGATTT‑CGTGGTGATGGAACCCACCGCCACTCCGCTACAGCAGCTGCGCTATGACAACTCTGTTTCTTTAGTCGACAAATTGTTCGTGATGATGACGTTGGGCGATGACCGt > 1:903291/1‑239 (MQ=255) cAAATTTTTGCAATTACAAGGCTGTCGCCTCTCGGCATATGAATCTTTCTCCCTGCCCACCCTCGGCGGAGCGAAATCTCTGGCCTTTGCCGTTTTGTTTGGCACCTTTTT‑CCCTGCAAAA‑GAGCT‑TTTTTT‑CGTGGTGATGGACCCCACCGCCACTCCGCTACagcagc < 2:682309/170‑1 (MQ=255) gTATTGCAATTACAAGGCTATCGCCTCTCGGCATATGAAGCTTTTTACCGGGCCACGCTCGGCGGAGCGAAATCTCGGGGCTTTGACGATTTGATTGGCATTTTTTT‑ACCTGGCAAA‑GAGGC‑TTATTT‑GGTGGGGATGAACCCCACCGCCACTCCGCTACAGCAGCTGCGCTATGACAACTCTGTTTCTTTAGTCGACAAATTGTTCGTGATGATGACGTTGGGCGATGACCGtt < 1:963182/235‑1 (MQ=255) ttttGCAATAAAAAGGCTATCGCCTCTCGGCATATGAAGTTTTTTCCGTGGCCCCCCTCGGCGGAGCGAAATCTCGGGCCCTTGACGTTTTGTTGGGCACTTTTTT‑CCCTGGAAAA‑GGGGC‑TGTTTT‑GGTGGTGAGGAACCCCCCCGCCACTCCGCTACAGCAGCTGCGCTATGAc < 2:50834/174‑1 (MQ=255) tGCAATTACAAGGCTATCGCCTCTCGGCATATGAAGCGTTTTACCTGGCCACGCTCGGCGGAGCGAAATCTCTGGGCCTTGACGATTTGATTGGCAACTTTTT‑ACCTGGCAAA‑GAGGC‑TGATTT‑CGTGGTGATGGAACCCACCGCCACTCCGCTa > 1:1201497/1‑155 (MQ=255) cAATTACAAGGCTATCGCCTCTCGGCATATGAAGCGTTCTACCTGGCCACGCTCGGCGGAGCGAAATCTCTGGGCCTTGACGATTTGATTGGCAACTTTTT‑ACCTGGCAAA‑GAGGC‑TGATTT‑CGTGGTGATGGAACCCACCGCCACTCCGCTACAGCAGCTGCGCTATGa > 1:682309/1‑170 (MQ=255) ttACAAGGCTATCGCCTCTCGGCATATGAAGCGTTTTACCTGGCCACGCTCGGCGGAGCGAAATCTCTGGGCCTTGACGATTTGATTGGCAACTTTTT‑ACCTGGCAAA‑GAGGC‑TGATTT‑CGTGGTGATGGAACCCACCGCCACTCCGCTACAGCAGCTGCGCTATGACAACTCTGTTTCTTTAGTCGACAAATTGTTCGTGATGATGACGTTGGGCGATGACCGTTCGATCTACCGCa > 2:569895/1‑238 (MQ=255) aCAAGGCTATCGCCTCTCGGCATATGAAGCGTTTTACCTGGCCACGCTCGGCGGAGCGAAATCTCTGGGCCTTGACGATTTGATTGGCAACTTTTT‑ACCTGGCAAA‑GAGGC‑TGATTT‑CGTGGTGATGGAACCCACCGCCACTCCGCTACAGCAGCTGCGCTATGACAACTCTGttt > 1:50834/1‑176 (MQ=255) aCAAGGCTATCGCCTCTCGGCATATGAAGCGTTTTACCTGGCCACGCTCGGCGGAGCGAAATCTCTGGGCCTTGACGATTTGATTGGCAACTTTTT‑ACCTGGCAAA‑GAGGC‑TGATTT‑CGTGGTGATGGAACCCACCGCCACTCCGCTACAGCAGCTGCGCTATGACAACTCTGTTTCTTTAGTCGACAAATTGTTCGTGATGATGACGTTGGGCGATGACCGTTCGATCTACCGCACCt > 1:168297/1‑239 (MQ=255) tATCGCCTCTCGGCATATGAAGCTTTTTACCTGGCCACGCTCGGCGGAGCGAATTCTCTGGGCCTTGACGATTTGATTGGCAACTTTTT‑ACCTGGCAAA‑GAGGC‑TGATTT‑CGTGGTGATGGAACCCACCGCCACTCCGCTACAGCAGCTGCGCTATGACAACTCTGTTTCTTTAGTCGACAAATTGTTCGTGATGATGACGTTGGGCGATGACCGTTCGATCTACCGCACCTACGTTGa < 1:569895/239‑1 (MQ=255) tCGCCTCTCGGCATATGAAGCGCTTTACCTGGCCACGCTCGGCGGAGCGAAATCTCTTGGCCTTGACGATTTGATTGGCAACTTTTT‑ACCTGGCAAA‑GAGGC‑TGATTT‑CGTGGTGATGGAACCCACCGCCACTCCGTTa > 1:1073498/1‑139 (MQ=255) ctctCGGCATATGAAGCGTTTTCCCTGGCCCCGCTGGGGGGAGCGAAATCTCTGGGCTTTGCCGATTTGATTGGCAACTTTTT‑CCCTGGCAAA‑GAGGC‑TGTTTT‑GGTGGTGAGGGAACCCACCGCCACTCCGCTACAGCAGCTgcgc < 1:905584/147‑1 (MQ=255) tcGGCATATGAAGCGTTTTACCTGGCCACGCTCGGCGGAGCGAAATCTCTGGGCCTTGACGATTTGATTGGCAACTTTTT‑ACCTGGCAAA‑GAGGC‑TGATTT‑CGTGGTGATGGAACCCACCGCCACTCCGCTACAGCAGCTGCGCTATGACAACTCTGTTTCTTTAGTCGACAAATTGTTCGTGATGATGACGTTGGGCGATGACCGTTCGATCTACCGCACCTACGTTGATGgtcg > 1:810809/1‑236 (MQ=255) tcGGCATATGAAGCGTTTTACCTGGCCACGCTCGGCGGAGCGAAATCTCTGGGCCTTGACGATCTGATTGGCAACTTTTT‑ACCTGGCAAA‑GAGGC‑TGATTT‑CGTGGTGATGGAACCCACCGCCACTCCGCTACAGCAGCTGCGCTATGACAAc > 1:679064/1‑153 (MQ=255) atGAAGCGTTTTACCTGGCCACGCTCGGCGGAGCGAAATCTCTGGGCCTTGACGATTTGATTGGCAACTTTTT‑ACCTGGCAAA‑GAGGC‑TGATTT‑CGTGGTGATGGAACCCACCGCCACTCCGCTACAGCAGCTGCGCTATGACAAct > 2:905584/1‑147 (MQ=255) atGAAGCGTTTTACCTGGCCACGCTCGGCGGAGCGAAATCTCTGGGCCTTGACGATTTGATTGGCAACTTTGT‑ACCTGGCAAA‑GAGGC‑TGATTT‑CGTGGTGATGGAACCCACCGCCACTCCGCTACAGCAGCt > 1:1312059/1‑133 (MQ=255) ttttACCTGGCCCCGCGCGGCGGAGCGAAATCTCTGGGCCTTGGTTATTTGATTGGCAACTTTTA‑ACCTGAAAAA‑GAGCC‑TTTTTT‑GGTGATGATGGACCCAGCCACCACTCCGCTACAGCAGCTGCGCTATGACAACTCTGTTTCTTTAGTCGACAAATTGTTCGTGATGATGACGTTGGGCGATGACCGTTCGATCTAc < 2:825450/201‑1 (MQ=255) gCCACGCTCGGCGGAGAAAAACCTCTGGGCCTGGACGATTTGATGGGCAACTTTTT‑ACCGGGAAAA‑GAGGC‑GGTTTT‑CGGGGTGAGGAACCCCACCGCCACTCCGCTACAGCAGCTGCGCTATGACAACTCTGTTTCTTTAg < 2:661704/142‑1 (MQ=255) ccACGCTCGGCGGAGCGAAATCTCTGGGCCTTGACGATTTGATTGGCAACTTTTT‑ACCTGGCAAA‑GAGGC‑TGATTT‑CGTGGTGATGGAACCCACCGCCACTCCGCTACAGCAGCTGCGCTATGACAACTCTGTTTCTTTAGTCGACAAATTGTTCGTGATGATGACGTTGGGCGATGACCGTTCGATCTACCGCACCTACg > 1:825450/1‑201 (MQ=255) gcggAGCGAAATCTCTGGGCCTTGACGATTTGATTGGCAACTTTTT‑ACCTGGCAAA‑GAGGC‑TGATTT‑CGTGGTGATGGAACCCACCGCCACTCCGCTACAGCAGCTGCGCTATGACAACTCTGTTTCTTTAGTCGACAAAtt > 1:661704/1‑142 (MQ=255) ggggcaaattctcGGGGCCTGGGCGTTTTGA‑TGGCAACTTTTT‑CGCTGGGAAAGGGGGC‑TGTTTT‑GGTGGTGATGGACCCCCCCGCCACTCCGCTACAGCAGCTGCGCTATGACAACTCTGTTTCTTTAGTCGACAAATTGTTCGTGATGATGACGTTGGGCGATGACCGTTCGATCTACCGCACCTACGTTGATGGTCGTCTGGTGTACGAACGCAACTAATAATAAAACTTTAACa < 2:55115/229‑1 (MQ=255) aGCGAAATCGTGGCGCCTTGACGTTTTGGTT‑GCCATTTTTT‑TCCTGGGCAA‑GGAGC‑TGTTTTGCTGGGAGATGAACCCCACCGCCACTCCGCTACAGCAGCTGCGCTATGACAACTCTGTTTCTTTAGTCGACAAATTGTTCGTGATGATGACGTTGGGCGATGACCGTTCGATCTACCGCACCTACGTTGATGGTCGTCTGGTGTACGAACGCAACTAATAATAAAACTTTAACATc < 2:772443/238‑1 (MQ=255) gCGAAATCTCTGGGCCTTGACGATTTGATTGGCAACTTTTT‑ACCTGGCAAA‑GAGGC‑TGATTT‑CGTGGTGATTGAACCCACCGCCACTCCGCTACAGCAGCTGCGCTATGACAACTCTGTTTCTTTAGTCGACAAATTGTTCGTGATGATGACGTTGGGCGATGACCGTTCGATCTACCGCACCTACGTTGATGGTCGTCTGGTGTACGAACGCAACTAATAATAAAACTTTAACATcc > 1:1354519/1‑238 (MQ=255) cttggggCGTTGACGTTTTGATTGGCATCTTTTT‑ACCGGGAAAA‑GGGGT‑TGATTT‑CGTGGTGAGGAACCCCACCGCCACTCCGCTACAGCAGCTGCGCTATGACAACTCTGTTTCTTTAGTCGACAAATTGTTCGTGATGATGACGTTGGGCGATGACCGTTCGATCTACCGCACCTACGTTGATGGTCGTCTGGTGTACGAACGCAACTAATAATAAAACTTTAACATCCTCGTGAgg < 1:429186/235‑1 (MQ=255) ctGGGCTTTGACGTTTGGATTGG‑AACTTTTTCACCTGGAAAG‑GAGGC‑TGTTTT‑CGTGGTGATGGACCCCACCGCCACTCCGCTACAGCAGCTGCGCTATGACAACTCTGTTTCTTTAGTCGACAAATTGTTCGTGATGATGACGTTGGGCGATGACCGTTCGATCTACCGCACCTACGTTGATGGTCGTCTGGTGTACGAACGCAACTAATAATAAAACTTTAACATCCTCGTGAGGAc < 2:1096352/239‑1 (MQ=255) ccTGGACTATTTGATTGGCATCTTTTT‑CCCT‑GAAAA‑GGGGCTTGTTTT‑CGGGGTGATGGACCCCCCCGCCACTCCGCTACAGCAGCTGCGCTATGACAACTCTGTTTCTTTAGTCGACAAATTGTTCGTGATGATGACGTTGGGCGATGACCGTTCGATCTACCGCACCTACGTTGATGGTCGTCTGGTGTACGAACGCAACTAATAATAAAACTTTAACATCCTCGTGAGGAcatcat < 2:168297/239‑1 (MQ=255) cTTGACGTTTTTATGGGCAATTTTTT‑CCCGGGAAAA‑GAGGC‑TGATTT‑GGTGTTGATGAAACCCACCGCCACTCCGCTACAGCAGCTGCGCTATGACAACTCTGTTTCTTTAGTCGACAAATTGTTCGTGATGATGACGTTGGGCGATGACCGTTCGATCTACCGCACCTACGTTGATGGTCGTCTGGTGTACGAACGCAACTAATAATAAAACTTTAACATCCTCGTGAGGAcatcat < 1:901925/238‑1 (MQ=255) tttgaggattGTTTGGCCATTTTTTCCCCTGGAAAA‑GGGTC‑TGTTTG‑CGTGGTAGAGCACCCCCCCGCCACTCCGCTACAGCAGCTGCGCTATGACAACTCTGTTTCTTTAGTCGACAAATTGTTCGTGATGATGACGTTGGGCGATGACCGTTCGATCTACCGCACCTACGTTGATGGTCGTCTGGTGTACGAACGCAACTAATAATAAAACTTTAACATCCTCGTGAGGACATCAtt < 2:903291/231‑1 (MQ=255) ttttt‑CCCTGGAAAG‑GGGGT‑TGTTTT‑GGGGGTGATGAACCCCACCGCCACTCCGCTACAGCAGCTGCGCTATGa < 1:604442/74‑1 (MQ=255) ggCAAA‑GAGGC‑TGATTT‑CGTGGTGATGGACCCCACCGCCACTCCGCTACAGCAGCTGCGCTATGACAACTCTGTTTCTTTAGTCGACAAATTGTTCGTGATGATGACGTTGGGCGATGACCGTTCGATCTACCGCACCTACGTTGATGGTCGTCTGGTGTACGAACGCAACTAATAATAAAACTTTAACATCCTCGTGAGGACATCATTATGTCTGGAGACATCCTACAAACACCGGa < 1:68111/238‑1 (MQ=255) ggCAAA‑GAGGC‑TGATTT‑CGTGGTGATGGAACCCACCGCCACTCCGCTACAGCAGCTGCGCTATGACAACTCTGTTTCTTTAGTCGACAAATTGTTCGTGATGATGACGTTGGGCGATGACCGTTCGATCTACCGCACCTACGTTGATGGTCGTCTGGTGTACGAACGCAACTAATAATAAAACTTTAACATCCTCGTGAGGACATCATTATGTCTGGAGACATCCTACAAACACCGGa > 2:68111/1‑238 (MQ=255) gCAAA‑GAGGC‑TGATTT‑CGTGGTGATGGAACCCACCGCCACTCCGCTACAGCAGCTGCGCTATGACAACTCTGtt > 2:604442/1‑74 (MQ=255) gCAAA‑GAGGC‑TGATTT‑CGTGGTGATGGAACCCACCGCCACTCCGCTACAGCAGCTGCGCTATGACAACTCTGTTTCTTTAGTCGACAAATTGTTCGTGATGATGACGTTGGGCGATGACCGTTCGATCTACCGCACCTACGTTGATGGTCGTCTGGTGTACGAACGCAACTAATAATAAAACTTTAACATCCTCGTGAGGACATCATTATGTCTGGAGACATCCTACAAACACCGGAc > 2:1371942/1‑238 (MQ=255) aaaaa‑GGGGC‑TTTTTT‑GGGGGTGTGGGACCCCCCCGCCACTCCGCTACAGCAGCTGCGCTATGACAACTCTGTTTCTTTAGTCGACAAATTGTTCGTGATGATGACGTTGGGCGATGACCGTTCGATCTACCGCACCTACGTTGATGGTCGTCTGGTGTACGAACGCAACt < 2:51903/169‑1 (MQ=255) agGT‑TGATTT‑CGTGGTGAGGGAACCCACCGCCACTCCGCTACAGCAGCTGCGCTATGACAACTCTGTTTCTTTAGTCGACAAATTGTTCGTGATGATGACGTTGGGCGATGACCGTTCGATCTACCGCACCTACGTTGATGgtcgtc < 1:377957/147‑1 (MQ=255) agGC‑TGATTT‑CGTGGTGATGGAACCCACCGCCACTCCGCTACAGCAGCTGCGCTATGACAACTCTGTTTCTTTAGTCGACAAATTGTTCGTGATGATGACGTTGGGCGATGACCGTTCGATCTACCGCACCTACGTTGATGgtcgtc > 2:377957/1‑147 (MQ=255) tGATTT‑CGTGGTGATGGAACCCACCGCCACTCCGCTACAGCAGCTGCGCTATGACAACTCTGTTTCTTTAGTCGACAAATTGTTCGTGATGATGACGTTGGGCGATGACCGTTCGATCTACCGCACCTACGTTGATGGTCGTCTGGTGTACGAACGCAACTAATAATaaaa > 1:51903/1‑171 (MQ=255) gATGGAACCCACCGCCACTCCGCTACAGCAGCTGCGCTATGACAACTCTGTTTCTTTAGTCGACAAATTGTTCGTGATGATGACGTTGGGCGATGACCGTTCGATCTACCGCACCTACGTTGATGGTCGTCTGGTGTACGAACGCAACTAATAATAAAACTTTAACATCCTCGTGAGGACATCATTATGTCTGGAGACATCCTACAAACACCGGACGCACCAAAGc > 1:439945/1‑226 (MQ=255) | TTAAAGTGGGCATGGGAACGGATATCGGTGCCGGAACCACTTTCAACATGCTGCAAACGCTGAACGAAGCCTACAAAGTATTGCAATTACAAGGCTATCGCCTCTCGGCATATGAAGCGTTTTACCTGGCCACGCTCGGCGGAGCGAAATCTCTGGGCCTTGACGATTTGATTGGCAACTTTTT‑ACCTGGCAAA‑GAGGC‑TGATTT‑CGTGGTGATGGAACCCACCGCCACTCCGCTACAGCAGCTGCGCTATGACAACTCTGTTTCTTTAGTCGACAAATTGTTCGTGATGATGACGTTGGGCGATGACCGTTCGATCTACCGCACCTACGTTGATGGTCGTCTGGTGTACGAACGCAACTAATAATAAAACTTTAACATCCTCGTGAGGACATCATTATGTCTGGAGACATCCTACAAACACCGGACGCACCAAAGC > NC_000913/3026724‑3027160 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |