Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,478,324	0	T	G	30.8%	130.1 / 11.2	52	G33G (GGT→GGG)	ynbB	putative CDP‑diglyceride synthase
Reads supporting (aligned to +/- strand):  ref base T (1/35);  new base G (16/0);  total (17/35)
Fisher's exact test for biased strand distribution p-value = 1.64e-12
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

TCTGTGGGGTCTGGCCGTTGCCATTTATCCACAGTGGATGCAGTGGAATAATCTTTTATGGAGCATTGCTTCAATTCTGCTTCTCTGGACTGCGATTAATCGTTGTCGGAGTGTGCTTCTTATGAGCGCTGAAATATAATGCTGGAAAAATCTCTGGCAACACTTTTCGCGTTGTTAATTTTAGCAACGCTGATAAACCGTTTTCTGCTATGGCGG‑TTACCGGAGAG‑AAAA‑GGGGGTGAGGTTACATTACGTATTCGTACCTGGTGGGGCATCGTCATTTG‑TTTTTCAATGGTGATTTCAGGTCCACGCTGGATGACGTTGACGTTTTTTGCGCTGATAAGTTTTCTGGCATTGAAAGAATATTGTACGCTTATATCTGTACATTTTCCGCGTTGGTTATATTGGGGTATTCCTCTTAACTATTTGCTTATCGGTTTTAATTGCTTTGAGCTGTTTCTGTTATTTATACCTTTG  >  NC_000913/1478088‑1478561                                                                                                                                                                                                                                                |                                                                                                                                                                                                                                               tCTGTGGGGTCTGGCCGTTGCCATTTATCCACAGTGGATGCAGTGGAATAATCTTTTATGGAGCATTGCTTCAATTCTGCTTCTCTGGACTGCGATTAATCGTTGTCGGAGTGTGCTTCTTATGAGCGCTGAAATATAATGCTGGAAAAATCTCTGGCAACACTTTTCGCGTTGTTAATTTTAGCAACGCTGATAAACCGTTTTCTGCTATGGCGG‑TTACCGGAGAG‑AAAA‑GGGGGTg                                                                                                                                                                                                                                               <  1:476066/238‑1 (MQ=255) tCTGTGGGGTCTGGCCGTTGCCATTTATCCACAGTGGATGCAGTGGAATAATCTTTTATGGAGCATTGCTTCAATTCTGCTTCTCTGGACTGCGATTAATCGTTGTCGGAGTGTGCTTCTTATGAGCGCTGAAATATAATGCTGGAAAAATCTCTGGCAACACTTTTCGCGTTGTTAATTTTAGCAACGCTGATAAACCGTTTTCTGCTATGGCGG‑TTACCGGAGAG‑AAAA‑GGGGGTg                                                                                                                                                                                                                                               <  2:803805/238‑1 (MQ=255)           cTGGCCGTTGCCATTTATCCACAGTGGATGCAGTGGAATAATCTTTTATGGAGCATTGCTTCAATTCTGCTTCTCTGGACTGCGATTAATCGTTGTCGGAGTGTGCTTCTTATGAGCGCTGAAATATAATGCTGGAAAAATCTCTGGCAACACTTTTCGCGTTGTTAATTTTAGCAACGCTGATAAACCGTTTTCTGCTATGGCGG‑TTACCGGAGAG‑AAAA‑GGGGGTGAGGTTACATTa                                                                                                                                                                                                                                    <  2:871991/239‑1 (MQ=255)           cTGGCCGTTGCCATTTATCCACAGTGGATGCAGTGGAATAATCTTTTATGGAGCATTGCTTCAATTCTGCTTCTCTGGACTGCGATTAATCGTTGTCGGAGTGTGCTTCTTATGAGCGCTGAAATATAATGCTGGAAAAATCTCTGGCAACACTTTTCGCGTTGTTAATTTTAGCAACGCTGATAAACCGTTTTCTGCTATGGCGG‑TTACCGGAGAG‑AAAA‑GGGGGTGAGGTTACATTa                                                                                                                                                                                                                                    <  2:755609/239‑1 (MQ=255)           cTGGCCGTTGCCATTTATCCACAGTGGATGCAGTGGAATAATCTTTTATGGAGCATTGCTTCAATTCTGCTTCTCTGGACTGCGATTAATCGTTGTCGGAGTGTGCCTCTTATGAGCGCTGAAATATAATGCTGGAAAAATCTCTGGCAACACTTTTCGCGTTGTTAATTTTAGCAACGCTGATAAACCGTTTTCTGCTATGGCGG‑TTACCGGAGAG‑AAAA‑GGGGGTGAGGTTACATTa                                                                                                                                                                                                                                    <  2:1008142/239‑1 (MQ=255)               ccGTTGCCATTTATCCACAGTGGATGCAGTGGAATAATCTTTTATGGAGCATTGCTTCAATTCTGCTTCTCTGGACTGCGATTAATCGTTGTCGGAGTGTGCTTCTTATGAGCGCTGAAATATAATGCTGGAAAAATCTCTGGCAACACTTTTCGCGTTGTTAATTTTAGCAACGCTGATAAACCGTTTTCTGCTATGGCGG‑TTACCGGAGGG‑GATA‑AGGGGGGTGGttcacttatgga                                                                                                                                                                                                                                >  1:1278539/1‑229 (MQ=255)                                            tGGAATAATCTTTTATGGAGCATTGCTTCAATTCTGCTTCTCTGGACTGCGATTAATCGTTGTCGGAGTGTGCTTCTTATGAGCGCTGAAATATAATGCTGGAAAAATCTCTGGCAACACTTTTCGCGTTGTTAATTTTAGCAACGCTGATAAACCGTTTTCTGCTATGGCGG‑TTATCGGTGGG‑GAAA‑GGGGGGGAGGGTAAATTTCGTATTTGGACCTGGTGGGGGGACGTCCTTTG‑t                                                                                                                                                                                                  >  2:1139052/1‑239 (MQ=255)                                                        ttATGGAGCATTGCTTCAATTCTGCTTCTCTGGACTGCGATTAATCGTTGTCGGAGTGTGCTTCTTATGAGCGCTGAAATATAATGCTGGAAAAATCTCTGGCAACACTTTTCGCGTTGTTAATTTTAGCAACGCTGATAAACCGTTTTCTGCTATGGCGG‑TTACCGGAGAG‑AAAA‑GGGGGTGAGGTTACATTa                                                                                                                                                                                                                                    <  1:1269227/194‑1 (MQ=255)                                                                cATTGCTTCAATTCTGCTTCTCTGGACTGCGATTAATCGTTGTCGGAGTGTGCTTCTTATGAGCGCTGAAATATAATGCTGGAAAAATCTCTGGCAACACTTTTCGCGTTGTTAATTTTAGCAACGCTGATAAACCGTTTTCTGCTATGGCGG‑TTACCGGAGAG‑AAAA‑GGGGGTGAGGTTACATTa                                                                                                                                                                                                                                    <  1:686467/186‑1 (MQ=255)                                                                cATTGCTTCAATTCTGCTTCTCTGGACTGCGATTAATCGTTGTCGGAGTGTGCTTCTTATGAGCGCTGAAATATAATGCCGGAAAAATCTCTGGCAACACTTTTCGCGTTGTTAATTTTAGCAACGCTGATAAACCGTTTTCTGCTATGGCGG‑TTAACGGGGAG‑AAAA‑GGGGGGGGGGGTACATTTAGTATTTGTAACTGGTGGGGGATCGTCATTTT‑TTTTTTAATGGGGGTTTTAgg                                                                                                                                                                              >  1:222753/1‑239 (MQ=255)                                                                  ttGCTTCAATTCTGCTTCTCTGGACTGCGATTAATCGTTGTCGGAGTGTGCTTCTTATGAGCGCTGAAATATAATGCTGGAAAAATCTCTGGCAACGCTTTTCGCGTTGTTAATTTTAGCAACGCTGATAAACCGTTTTCTGCTATGGCGG‑TTACCGGAGAG‑AAAA‑GGGGGTGAGGTTACATTACGTATTCGTACCTGGTGGGGCATCGTCATTTG‑TTTTTCAATGGTGATTTCAGGt                                                                                                                                                                             <  2:529493/238‑1 (MQ=255)                                                                      ttCAATTCTGCTTCTCTGGACTGCGATTAATCGTTGTCGGAGTGTGCTTCTTATGAGCGCTGAAATATAATGCTGGAAAAATCTCTGGCAACACTTTTCGCGTTGTTAATTTTAGCAACGCTGATAAACCGTTTTCTGCTATGGCGG‑TTACCGGAGAG‑AAAA‑GGGGGTGAGGTTACATTACGTATTCGTACCTGGTGGGGCATCGTCATTTG‑TTTTTCAATGGTGATTTCAGGTCCACg                                                                                                                                                                        <  2:373975/239‑1 (MQ=255)                                                                        cAATTCTGCTTCTCTGGACTGCGATTAATCGTTGTCGGAGTGTGCTTCTTATGAGCGCTGAAATATAATGCTGGAAAAATCTCTGGCAACACTTTTCGCGTTGTTAATTTTAGCAACGCTGATAAACCGTTTTCTGCTATGGCGG‑TTACCGGGGGG‑AAAA‑GGGGGGGGGGTTACATTATGTATTTGTTCCTGGGGGGGGATCGTCATTTG‑TTTTTCAATGGGGATTTTAGGGCCAc                                                                                                                                                                         >  1:904547/1‑236 (MQ=255)                                                                                cTTCTCTGGACTGCGATTAATCGTTGTCGGAGTGTGCTTCTTATGAGCGCTGAAATATAATGCTGGAAAAATCTCTGGCAACACTTTTCGCGTTGTTAATTTTAGCAACGCTGATAAACCGTTTTCTGCTATGGCGG‑TTACCGGGGGGAAAAA‑GGGGGGGGGGTTaa                                                                                                                                                                                                                                        >  2:637438/1‑166 (MQ=255)                                                                                             cGATTAATCGTTGTCGGAGTGTGCTTCTTATGAGCGCTGAAATATAATGCTGGAAAAATCTCTGGCAACACTTTTCGCGTTGTTAATTTTAGCAACGCTGATAAACCGTTTTCTGCTATGGCGG‑TTACCGGGGAG‑AAAA‑GGGGGGGGGGGTATATTACGGATTCGTACCTTGGGGGGGATCGTCATTTG‑TTTTTTTATGGGGGTTTTTGGTCCTCGCTGGGTGGTGTTGAGGttttttt                                                                                                                                                 >  2:369247/1‑238 (MQ=255)                                                                                             cGATTAATCGTTGTCGGAGTGTGCTTCTTATGAGCGCTGAAATATAATGCTGGAAAAATCTCTGGCAACACTTTTCGCGTTGTTAATTTTAGCAACGCTGATAAACCGTTTTCTGCTATGGCGG‑TTAACGGGGGG‑GAAA‑AGGGGGGGGGGTAAATTACAGATTTGTGACTGGTGGGGGGTCGTCCATTG‑TTTTTTCATTGTGGTTTTTGGGCCACGCTGGTGGAGGGTGTCGttttttt                                                                                                                                                 >  2:436522/1‑238 (MQ=255)                                                                                             cGATTAATCGTTGTCGGAGTGTGCTTCTTATGAGCGCTGAAATATAATGCTGGAAAAATCTCTGGCAACACTTTTCGCGTTGTTAATTTTAGCAACGCTGATAAACCGTTTTCTGCTATGGCGG‑GTACCTGGGGG‑AAAAGGGGGGGGGGGTTATTTTA‑TTATTTGTTACTGGGGGGGGAACGGCCTTTGTTTTTTTAATGGTGTTTTCAGGTCACCGCGGGTGGAGGTGGTCGtttttt                                                                                                                                                  >  2:1150477/1‑239 (MQ=255)                                                                                                ttAATCGTTGTCGGAGTGTGCTTCTTATGAGCGCTGAAATATAATGCTGGAAAAATCTCTGGCAACACTTTTCGCGTTGTTAATTTTAGCAACGCTGATAAACCGTTTTCTGCTATGGCGG‑TTACCGGAGAG‑AAAA‑GGGGGTGAGGTTACATTACGTATTCGTACCTGGTGGGGCATCGTCATTTG‑TTTTTCAATGGTGATTTCAGGTCCACGCTGGATGACGTTGACGTTTTTTgcg                                                                                                                                               <  1:109738/238‑1 (MQ=255)                                                                                                ttAATCGTTGTCGGAGTGTGCTTCTTATGAGCGCTGAAATATAATGCTGGAAAAATCTCTGGCAACACTTTTCGCGTTGTTAATTTTAGCAACGCTGATAAACCGTTTTCTGCTATGGCGG‑TTACCGGAGAG‑AAAA‑GGGGGTGAGGTTACATTACGTATTCGTACCTGGTGGGGCATCGTCATTTG‑TTTTTCAATGGTGATTTCAGGTCCACGCTGGATGACGTTGACGTTTTTTgcg                                                                                                                                               <  1:547572/238‑1 (MQ=255)                                                                                                    tCGTTGTCGGAGTGTGCTTCTTATGAGCGCTGAAATATAATGCTGGAAAAATCTCTGGCAACACTTTTCGCGTTGTTAATTTTAGCAACGCTGATAAACCGTTTTCTGCTATGGCGG‑TTACCGGAGAG‑AAAA‑GGGGGTGAGGTTACATTACGTATTCGTACCTGGTGGGGCATCGTCATTTG‑TTTTTCAATGGTGATTTCAGGTCCACGCTGGATGACGTTGACGTTTTTTGCGCTGAt                                                                                                                                          <  1:1188827/239‑1 (MQ=255)                                                                                                        tGTCGGAGTGTGCTTCTTATGAGCGCTGAAATATAATGCTGGAAAAATCTCTGGCAACACTTTTCGCGTTGTTAATTTTAGCAACGCTGATAAACCGTTTTCTGCTATGGCGG‑TTACCGGAGAG‑AAAA‑GGGGGTGAGGTTACATTa                                                                                                                                                                                                                                    <  1:7023/146‑1 (MQ=255)                                                                                                          tCGGAGTGTGCTTCTTATGAGCGCTGAAATATAATGCTGGAAAAATCTCTGGCAACACTTTTCGCGTTGTTAATTTTAGCAACGCTGATAAACCGTTTTCTGCTATGGCGG‑TTTTACGCGGG‑AAAA‑GGGGGGGAGGGTACATTTTTCATTTGTTCCCGGTGGCGCGTCGGCATTTT‑TTTTTTCATGGTGGTTTTTGGTCCACGCCGGATGCAGGTGTAGTTTTTTTTGCTGATAAGatt                                                                                                                                    >  2:638706/1‑239 (MQ=255)                                                                                                                  tgCTTCTTATGAGCGCTGAAATATAATGCTGGAAAAATCTCTGGCAACACTTTTCGCGTTGTTAATTTTAGCAACGCTGATAAACCGTTTTCTGCTATGGCGGTTTACCGG‑GAG‑AAAA‑AGGGGGGGGGGTACATTACGTATTTGtt                                                                                                                                                                                                                          >  2:7023/1‑145 (MQ=255)                                                                                                                     ttcttATGAGCGCTGAAATATAATGCTGGAAAAATCTCTGGCAACACTTTTCGCGTTGTTAATTTTAGCAACGCTGATAAACCGTTTTCTGCTATGGCGG‑TTACCGGAGAG‑AAAA‑GGGGGTGAGGTTACATTACGTATTCGTACCTGGTGGGGCATCGTCATTTG‑TTTTTCAATGGTGATTTCAGGTCCACGCTGGAtgacgttgac                                                                                                                                                         <  1:1060458/207‑1 (MQ=255)                                                                                                                     ttcttATGAGCGCTGAAATATAATGCTGGAAAAATCTCTGGCAACACTTTTCGCGTTGTTAATTTTAGCAACGCTGATAAACCGTTTTCTGCTATGGCGG‑TTACCGGAGAG‑AAAA‑GGGGGTGAGGTTACATTACGTATTCGTACCTGGTGGGGCATCGTCATTTG‑TTTTTCAATGGTGATTTCAGGTCCACGCTGGATGACGTTGACGTTTTTTGCGCTGATAAGTTTTCTGGCATTGa                                                                                                                         <  2:1359302/239‑1 (MQ=255)                                                                                                                        ttATGAGCGCTGAAATATAATGCTGGAAAAATCTCTGGCAACACTTTTCGCGTTGTTAATTTTAGCAACGCTGATAAACCGTTTTCTGCTATGGCGG‑TTTCCGGGGAG‑GAAA‑AGGGGGGAGGGTACa                                                                                                                                                                                                                                       >  2:223903/1‑127 (MQ=255)                                                                                                                               cgcTGAAATATAATGCTGGAAAAATCTCTGGCAACACTTTTCGCGTTGTTAATTTTAGCAACGCTGATAAACCGTTTTCTGCTATGGCGG‑TTTCCGGGGGG‑AAAA‑AGGGGGGAGGGTACa                                                                                                                                                                                                                                       >  2:281748/1‑120 (MQ=255)                                                                                                                               cgcTGAAATATAATGCTGGAAAAATCTCTGGCAACACTTTTCGCGTTGTTAATTTTAGCAACGCTGATAAACCGTTTTCTGCTATGGCGG‑TTAACGGGGGG‑AAAA‑GGGGGGGGGGGTACATTACGTATTCTTTCCTCGGGTGGCGTGGGCGTTTG‑TTTTTTAAAGGTGAGTTCTGGTTCCCGCTGGGTGCCGGTGATGtgttttttg                                                                                                                                               >  2:1060458/1‑204 (MQ=255)                                                                                                                                gcTGAAATATAATGCTGGAAAAATCTCTGGCAACTCTTTTCGCGTTGTTAATTGTAGCAACGCTGATAAACCGTTTTCTGCTATGGCGG‑TTACCGGAGAG‑AAAA‑GGGGGTGAGGTTACATTACGTATTCGTACCTGGTGGGGCATCGTCATTTG‑TTTTTCAATGGTGATTTCAAGTCCACGCTGGATGACGTTGACGTTTTTTGCGCTGATAAGTTTTCTGGCATTGAAAGAATATTGt                                                                                                              <  1:594121/239‑1 (MQ=255)                                                                                                                                gcTGAAATATAATGCTGGAAAAATCTCTGGCAACACTTTTCGCGTTGTTAATTTTAGCAACGCTGATAAACCGTTTTCTGCTATGGCGG‑TTACCGGAGAG‑AAAA‑GGGGGTGAGGTTACATTACGTATTCGTACCTGGTGGGGCATCGTCATTTG‑TTTTTCAATGGTGATTTCAGGTCCACGCTGGATGACGTTGACGTTTTTTGCGCTGATAAGTTTTCTGGCATTGAAAGAATATTGt                                                                                                              <  1:1139052/239‑1 (MQ=255)                                                                                                                                gcTGAAATATAATGCTGGAAAAATCTCTGGCAACACTTTTCGCGTTGTTAATTTTAGCAACGCTGATAAACCGTTTTCTGCTATGGCGG‑TTACCGGAGAG‑AAAA‑GGGGGTGAGGTTACATTACGTAATCGTACCTGGTGGGGCATCGTCATTTG‑TTTTTCAATGGTGATTTCAGGTCCACGCTGGATGACGTTGACGTTTTTTGCGCTGATAAGTTTTCTGGCATTGAAAGAATATTGt                                                                                                              <  1:59287/239‑1 (MQ=255)                                                                                                                                           aTGCTGGAAAAATCTCTGGCAACACTTTTCGCGTTGTTAATTTTAGCAACGCTGATAAACCGTTTTCTGCTATGGCGG‑TTACCGGAGAG‑AAAA‑GGGGGTGAGGTTACATTACGTATTCGTACCTGGTGGGGCATCGTCATTTG‑TTTTTCAATGGTGATTTCAGGTCCACGCTGGATGACGTTGACGTTTTTTGCGCTGATAAGTTTTCTGGCATTGAAAGAATATTGTACGCTTATATc                                                                                                   <  1:369247/239‑1 (MQ=255)                                                                                                                                                 gAAAAATCTCTGGCAACACTTTTCGCGTTGTTAATTTTAGCAACGCTGATAAACCGTTTTCTGCTATGGCGG‑TTACCGGGGAG‑AAAA‑GGGGGGGAGGTTACATTACGTATTCGTACCTGGTGGGGGATCGTCCTTTT‑TTTTTTTATTGGGATTTCCGGGCCACGCTGGATGACGGTGACGTTTTTTTTGCTGATAAGTTTTCTTGCATTTAAAGAATATTTTATGCTTTTTTTTGTACa                                                                                             >  1:31601/1‑239 (MQ=255)                                                                                                                                                                   cTTTTCGCGTTGTTAATTTTAGCAACGCTGATAAACCGTTTTCTGCTATGGCGG‑TTACCGGAGAG‑AAAA‑GGGGGTGAGGTTACATTACGTATTCGTACCTGGTGGGGCATCGTCATTTG‑TTTTTCAATGGTGATTTCAGGTCCACGCTGGATGACGTTGACGTTTTTTGCGCTGATAAGTTTTCTGGCATTGAAAGAATATTGTACGCTTATATCTGTACATTTTCCGCGTTGGTtata                                                                           <  1:638706/239‑1 (MQ=255)                                                                                                                                                                      ttCGCGTTGTTAATTTTAGCAACGCTGATAAACCGTTTTCTGCTATGGCGG‑TTACCGGAGAG‑AAAA‑GGGGGTGAGGTTACATTACGTATTCGTACCTGGTGGGGCATCGTCATTTG‑TTTTTCAATGGTGATTTCAGGTCCACGCTGGATGACGTTGACGTTTTTTGCGCTGATAAGTTTTCTGGCATTGAAAGAATATTGTACGCTTATATCTGTACATTTTCCGCGTTGGTTATATTg                                                                        <  1:436522/239‑1 (MQ=255)                                                                                                                                                                      ttCGCGTTGTTAATTTTAGCAACGCTGATAAACCGTTTTCTGCTATGGCGG‑TTACCGGAGAG‑AAAA‑GGGGGTGAGGTTACATTACGTATTCGTACCTGGTGGGGCAACGTCATTTG‑TTTTTCAATGGTGATTTCAGGTCCACGCTGGATGACGTTGACGTTTTTTGCGCTGATAAGTTTTCTGGCATTGAAAGAATATTGTACGCTTATATCTGTACATTTTCCGCGTTGGTTATATTg                                                                        <  1:1085995/239‑1 (MQ=255)                                                                                                                                                                           gttgttAATTTTAGCAACGCTGATAAACCGTTTTCTGCTATGGCGG‑TTACCGGAGAG‑AAAA‑GGGGGTGAGGTTACATTACGTATTCGTACCTGGTGGGGCATCGTCATTTG‑TTTTTCAATGGTGATTTCAGGTGCACGCTGGATGACGTTGACGTTTTTTGCGCTGATAAGTTTTCTGGCATTGAAAGAATATTGTACGCTTATATCTGTACATTTTCCGCGTTGGTTATATTGGGGTa                                                                   <  1:36983/239‑1 (MQ=255)                                                                                                                                                                                  aTTTTAGCAACGCTGATAAACCGTTTTCTGCTATGGCGG‑TTACCGGAGAG‑AAAA‑GGGGGTGAGGTTACATTACGTATTCGTACCTGGTGGGGCATCGTCATTTG‑TTTTTCAATg                                                                                                                                                                                         <  2:7776/114‑1 (MQ=255)                                                                                                                                                                                   ttttAGCAACGCTGATAAACCGTTTTCTGCTATGGCGG‑TTACCGGAGAG‑AAAA‑GGGGGTGAGGTTACATTACGTATTCGTACCTGGTGGGGCATCGTCATTTG‑TTTTTCAATGGTGATTTCAGGTCCACGCTGGATGACGTTGACGTTTTTTGCGCTGATAAGTTTTCTGGCATTGAAAGAATATTGTACGCTTATATCTGTACATTTTCCGCGTTGGTTATATTGGGGTATTCCTCtt                                                           <  2:589668/239‑1 (MQ=255)                                                                                                                                                                                    tttAGCAACGCTGATAAACCGTTTTCTGCTATGGCGG‑TTACCGGAGAG‑AAAA‑GGGGGTGAGGTTACATTACGTATTCGTACCTGGTGGGGCATCGTCATTTG‑TTTTTCAATGGTGAttt                                                                                                                                                                                  <  2:1329348/119‑1 (MQ=255)                                                                                                                                                                                            cGCTGATAAACCGTTTTCTGCTATGGCGG‑TTTCCGGGGAG‑GAAA‑GGGGGGGGGGTTTCATTACTTATTCTTTCCCTGTGGGGGGTCGTCATTTG‑TTTTTCAATGGGGATTTTAg                                                                                                                                                                               >  1:7776/1‑114 (MQ=255)                                                                                                                                                                                              cTGATAAACCGTTTTCTGCTATGGCGG‑TTACCGGGGGG‑AAAA‑GGGGGGGAGGGTTCATTACGTATTCGTACATGGGGGGGGGTCGTCATTTG‑TTTTTTAATGGGGATTTTAGGTCCACg                                                                                                                                                                        >  1:1329348/1‑119 (MQ=255)                                                                                                                                                                                               tGATAAACCGTTTTCTGCTATGGCGG‑TTACCGGAGAG‑AAAA‑GGGGGTGAGGTTACATTACGTATTCGTACCTGGTGGGGCATCGTCATTTG‑TTTTTCAATGGTGATTTCAGGTCCACGCTGGATGACGTTGACGTTTTTTGCGCTGATAAGTTTTCTGGCATTGAAAGAATATTGTACGCTTATATCTGTACATTTTCcgc                                                                                     <  1:586793/201‑1 (MQ=255)                                                                                                                                                                                                gATAAACCGTTTTCTGCTATGGCGG‑TTACCGGAGAG‑AAAA‑GGGGGTGAGGTTACATTACGTATTCGTACCTGGTGGGGCATCGTCATTTG‑TTTTTCAATGGTGATTTCAGGTCCACGCTGGATGACGTTGACGTTTTTTGCGCTGATAAGTTTTCTGGCATTGAAAGTATATTGTACGCTTATATCTGTACATTTTCCGCGTTGGTTATATTGGGGTATTCCTCTTAACTATTTGCTTa                                              <  1:1292233/239‑1 (MQ=255)                                                                                                                                                                                                         ttttCTGCTATGGCGG‑TTACCGGAGAG‑AAAA‑GGGGGTGAGGTTACATTACGTATTCGTACCTGGTGGGGCATCGTCATTTG‑TTTTTCAATGGTGAttt                                                                                                                                                                                  <  1:965811/98‑1 (MQ=255)                                                                                                                                                                                                               gCTATGGCGG‑TTACCGGAGAG‑AAAA‑GGGGGTGAGGTTACATTACGTATTCGTACCTGGTGGGGCATCGTCATTTG‑TTTTTCAATGGTGATTTCAGGTCCACGCTGGATGACGTTGACGTTTTTTGCGCTGATAAGTTTTCTGGCATTGAAAGAATATTGTACGCTTATATCTGTACATTTTCCGCGTTGGTTATATTGGGGTATTCCTCTTAACTATTTGCTTATCGGTTTTAATTGCt                               <  2:222753/239‑1 (MQ=255)                                                                                                                                                                                                                      cGG‑TTACCGGAGAG‑AAAA‑GGGGGTGAGGTTACATTACGTATTCGTACCTGGTGGGGCATCGTCATTTG‑TTTTTCAATGGTGATTTCAGGTCCACGCTGGATGACGTTGACGTTTTTTGCGCTGATAAGTTTTCTGGCATTGAAAGAATATTGTACGCTTATATCTGTACATTTTCCGCGTTGGTTATATTGGGGTATTCCTCTTAACTATTTGCTTATCGGTTTTAATTGCTTTGAGc                         <  2:904547/238‑1 (MQ=255)                                                                                                                                                                                                                              cGGAGAG‑AAAA‑GGGGGTGAGGTTACATTACGTATTCGTACCTGGTGGGGCATCGTCATTTG‑TTTTTCAATGGTGATTTCAGGTCCACGCTGGATGACGTTGACGTTTTTTGCGCTGATAAGTTTTCTGGCATTGAAAGAATATTGTACGCTTATATCTGTACATTTTCCGCGTTGGTTATATTGGGGTATTCCTCTTAACTATTTGCTTATCGGTTTTAATTGCTTTGAGCTGTTTCTg                 <  1:680662/239‑1 (MQ=255)                                                                                                                                                                                                                              cGGAGAG‑AAAA‑GGGGGTGAGGTTACATTACGTATTCGTACCTGGTGGGGCATCGTCATTTG‑TTTTTCAATGGTGATTTCAGGTCCACGCTGGATGACGTTGACGTTTTTTGCGCTGATAAGTTTTCTGGCATTGAAAGAATATTGTACGCTTATATCTGTACATTTTCCGCGTTGGTTATATTGGGGTATTCCTCTTAACTATTTGCTTATCGGTTTTAATTGCTTTGAGCTGTTTCTg                 <  1:365891/239‑1 (MQ=255)                                                                                                                                                                                                                              cGGAGAG‑AAAA‑GGGGGTGAGGTTACATTACGTATTCGTACCTGGTGGGGCATCGTCATTTG‑TTTTTCAATGGTGATTTCAGGTCCACGCTGGATGACGTTGACGTTTTTTGCGCTGATAAGTTTTCTGGCATTGAAAGAATATTGTACGCTTATATCTGTACATTTTCCGCGTTGGTTATATTGGGGTATTCCTCTTAACTATTTGCTTATCGGTTTTAATTGCTTTGAGCTGTTTCTg                 <  1:339560/239‑1 (MQ=255)                                                                                                                                                                                                                                 agag‑aAAA‑GGGGGTGAGGTTACATTACGTATTCGTACCTGGTGGGGCATCGTCATTTG‑TTTTTCAATGGTGATTTCAGGTCCACGCTGGATGACGTTGACGTTTTTTGCGCTGATAAGTTTTCTGGCATTGAAAGAATATTGTACGCTTATATCTGTACATTTTCCGCGTTGGTTATATTGGGGTATTCCTCTTAACTATTTGCTTATCGGTTTTAATTGCTTTGAGCTGTTTCTGtt               <  1:1150477/238‑1 (MQ=255)                                                                                                                                                                                                                                               gTGAGGTTACATTACGTATTCGTACCTGGTGGGGCATCGTCATTTG‑TTTTTCAATGGTGATTTCAGGTCCACGCTGGATGACGTTGACGTTTTTTGCGCTGATAAGTTTTCTGGCATTGAAAGAATATTGTACGCTTATATCTGTACATTTTCCGCGTTGGTTATATTGGGGTATTCCTCTTAACTATTTGCTTATCGGTTTTAATTGCTTTGAGCTGTTTCTGTTATTTATACCTTTg  >  1:1279399/1‑239 (MQ=255)                                                                                                                                                                                                                                                |                                                                                                                                                                                                                                               TCTGTGGGGTCTGGCCGTTGCCATTTATCCACAGTGGATGCAGTGGAATAATCTTTTATGGAGCATTGCTTCAATTCTGCTTCTCTGGACTGCGATTAATCGTTGTCGGAGTGTGCTTCTTATGAGCGCTGAAATATAATGCTGGAAAAATCTCTGGCAACACTTTTCGCGTTGTTAATTTTAGCAACGCTGATAAACCGTTTTCTGCTATGGCGG‑TTACCGGAGAG‑AAAA‑GGGGGTGAGGTTACATTACGTATTCGTACCTGGTGGGGCATCGTCATTTG‑TTTTTCAATGGTGATTTCAGGTCCACGCTGGATGACGTTGACGTTTTTTGCGCTGATAAGTTTTCTGGCATTGAAAGAATATTGTACGCTTATATCTGTACATTTTCCGCGTTGGTTATATTGGGGTATTCCTCTTAACTATTTGCTTATCGGTTTTAATTGCTTTGAGCTGTTTCTGTTATTTATACCTTTG  >  NC_000913/1478088‑1478561

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑