Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 3,135,781 | 0 | G | T | 24.5% | 119.1 / 13.1 | 50 | R197R (CGC→CGA) | pitB | phosphate transporter |
Reads supporting (aligned to +/- strand): ref base G (6/31); new base T (12/0); total (19/31) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 2.01e-07 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Rejected as consensus: Frequency below/above cutoff threshold. |
TGCAGGTAGTGTTCGAAGTTGGTAACGGCATCGCGGGTACGGGTAATTTCATAGCCGGACGCATTCATATTGACGACGAAGCCAGCAGGGGCAATCCCCACCAGTACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTACGTTTG‑CCTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTGAATACGGTCACGCTTTTTCGTCCCGCTCCAGTAGCGTCGCAGCAGG‑AATATCAGGCCTCCCGCAATGACCAGGCCGACGATAGGGGAAACAATCAGCGAGGAGAAAATTTTGGTCACTTCACGCAGGTTTAACGCATCCATCACCGATGAGCCGGTTAACAGCGCGTTGGTTAAACCGATGCCGATAATCGCACCAATCAAGGTGTG > NC_000913/3135548‑3136008 | tGCAGGTAGTGTTCGAAGTTGGTAACGGCATCGCGGGTGCGGGTAATTTCATAGCCGGACGCATTAATATTGACGACGAAGCCAGCAGGGGCAATCCCCCCCAGTACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTACGTTTG‑CCTTTTTTCTTTTTGCGacc < 1:387146/239‑3 (MQ=255) aGTGTTCGAAGTTGGTAACGGCATCGCGGGTACGGGTAATTTCATAGCCGGACGCATTCATATTGACGACGAAGCCAGCAGGGGCAATCCCCACCAGTACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGCAACAATCACCGCAATACGCGTCCAGAACGCCGGTGTAGCTGTGCCCTTTTTTCTTTTTCTGATCTTcggt > 2:39921/1‑236 (MQ=37) aGTGTTCGAAGTTGGTAACGGCATCGCGGGTACGGGTAATTTCATAGCCGGACGCATTCATATTGACGACGAAGCCAGCAGGGGCAATCCCCACCAGTACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGACTGGCGGGTTACGGTTG‑CCCTCTTTCTTTTTTTCTTCTTCCggc > 2:740173/1‑238 (MQ=37) aCGGCATCGCGGGTACGGGTAATTTCATAGCCGGACGCATTCATATTGACGACGAAGCCAGCAGGGGCAATCCCCACCAGTACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTACGTTTG‑CCTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTGAATACGGt < 1:39921/238‑1 (MQ=255) tCGCGGGTACGGGTAATTTCATAGCCGGACGCATTCATATTGACGACGAAGCCAGCAGGGGCAATCCCCACCAGTACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTACGGTTG‑CCTTTTTTTTTTTTGCGATCTTTCGGAATGTGGTGAATAAGGTCAc > 1:691992/1‑235 (MQ=255) cgcgGGTACGGGTAATTTCATAGCCGGACGCATTCATATTGACGACGAAGCCAGCAGGGGCAATCCCCACCAGTACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTACGTTTG‑TCTTTTTTTTTTTTTTGTTCTCTCGGACAGCGGTGAATAAGGTCACCCttt > 2:99489/1‑239 (MQ=37) aGCCGGACGCATTCATATTGACGACGAAGCCAGCAGGGGCAATCCCCACCAGTACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTTCGTTTT‑CCTTTTTTTTTTTTTCGATCTTCCTGAAAGCGGTGGATATGAGCACGCTTTTTCTTCTCGCCCCCGTAGcc > 2:780053/1‑237 (MQ=37) aGCCGGACGCATTCATATTGACGACGAAGCCAGCAGGGGCAATCCCCACCAGTACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTACGTTTG‑CCTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTGAATACGGTCACGCTTTTTCGTCCCGCTCCAGTAGCGt < 2:255401/239‑1 (MQ=255) cGGACGCATTCATATTGACGACGAAGCCAGCAGGGGCAATCCCCACCAGTACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTACGTTTG‑CCTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTGAATACGGTCACGCTTTTTCGTCCCGCTCCAGTAGCGTCgc < 1:99489/239‑1 (MQ=255) gCATTCATATTGACGACGAAGCCAGCAGGGGCAATCCCCACCAGTACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTACGTTTG‑CCTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTGAATACGGTCACGCTTTTTCGTCCCGCTCCAGTAGCGTCGcagcag < 1:12781/239‑1 (MQ=255) gCATTCATATTGACGACGAAGCCAGCAGGGGCAATCCCCACCAGTACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTACGTTTG‑CCTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTGAATACGGTCACGCTTTTTCGTCCCGCTCCAGTAGCGTCGcagcag < 2:530651/239‑1 (MQ=255) cgaAGCCAGCAGGGGCAATCCCCACCAGTACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTACGTTTT‑CCTTTTTTTTTTTTTTTCTATTTCGGAATGCGGGGAATTCTGTTACCCTTTTTCCCCCCTCTCCACTAGCGTCGCCACAGG‑GATATCATGCCTcc > 2:306107/1‑238 (MQ=25) gaAGCCAGCAGGGGCAATCCCCACCAGTACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTACGTTTG‑CCTTTTTTCTTTTTTCg > 1:560007/1‑159 (MQ=255) gaAGCCAGCAGGGGCAATCCCCACCAGTACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTACGTTTG‑CCTTTTTTCTTTTTGCg < 2:560007/159‑1 (MQ=255) agGGGCAATCCCCACCAGTACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTACGTTTG‑CCTTTTTTCTTTTTGCGATCTTCCGGAATGCGTTGAATACGGTCACGCTTTTTCGTCCCGCTCCAGTAGCGTCGCAGCAGG‑AATATCAGGCCTCCCGCAATGAc < 1:798913/237‑1 (MQ=255) agGGGCAATCCCCACCAGTACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTACGTTTG‑CCTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTGAATACGGTCACGCTTTTTCGTCCCGCTCCAGTAGCGTCGCAGCAGG‑AATATCAGGCCTCCCGCAATGAc < 1:740173/237‑1 (MQ=255) gccAATCCCCGCCCGCACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATGAGCGCAATACGCGTCCAGAATGGCGGTTTACGTTTG‑CCTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTGAATACGGTCACGCTTTTTCGTCCCGCTCCAGTAGCGTCGCAGCAGG‑AATATCAGGCCTCCCGCAATGAcc < 2:390074/233‑1 (MQ=255) cAATCCCCACCAGTACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTACGTTTG‑CCTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTGAATACGGTCACGCTTTTTCGTCCCGCTCCAGTAGCGTCGCAGCAGG‑AATATCAGGCCTCCCGCAATGACCAGGcc < 1:780053/238‑1 (MQ=255) cccACCAGTACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTACGTTTG‑CCTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTGAATACGGTCACGCTTTTTCGTcc < 1:775942/181‑1 (MQ=255) accaGTACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTACGTTTG‑CCTTTTTTCTTTTTGCg > 1:332515/1‑137 (MQ=255) accaGTACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTACGTTTG‑CCTTTTTTCTTTTTGCg < 2:332515/137‑1 (MQ=255) ccaGTACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTACGTTTG‑CCTTTTTTCTTTTTGCGATCTTCCGGAATGc < 1:287858/150‑1 (MQ=255) ccaGTACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTACGTTTG‑CCTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTGAATACGGTCACGCTTTTTCGTCCCGCTCCAGTAGCGTCGCAGCAGG‑AATATCAGGCCTCCCGCAATGACCAGGcc > 1:383254/1‑229 (MQ=255) ccaGTACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGAAATACGCGTCCAGAATGGCGGTTTACGTTTG‑CCTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTGAATACGGTCACGCTTTTTCGTCCCGCTCCAGTAGCGTCGCAGCAGG‑AATATCAGGCCTCCCGCAATGACCAGGcc < 2:383254/229‑1 (MQ=255) ccaGTACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTCGCGCCGTCCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTACGTTTG‑CCTTTTTTCTTTTTGCGATCTTc < 1:86602/142‑1 (MQ=255) tACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTACGTTTT‑CCTTTTTTCTTTTTTCGCTCTTCCGGAATGCGGTGAATACGGGCACGCTTTTTCGTCCCCCCCCAGTAGCGTCGCAGCAGG‑AATATAAGGCGTCCCGCAATGACACGGACGACGCTAGGGGcaa > 2:443649/1‑239 (MQ=37) tACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTACGTTTG‑CCTTTTTTCTTTTTGCGATCTTCCGGAATGc < 1:556242/146‑1 (MQ=255) aCCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCGCGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTACGTTTG‑CCTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTGAATACGGTCACGCTTTTTCGTCCCGCTCCAGTAGCGTCGCAGCAGG‑AATATCAGGCCTCCCGCAATGACCAGGCCGACGATAGGGGa < 1:306107/236‑1 (MQ=255) ccAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATCCGCGTCCAGAATGGCGGATTACGGTTG‑CCTTTTTTTTTTTTTTGATCCTCCGGAATGCGGTGAATAAGGTCACGCTTTTTTTTCCCGCCTCAGtt > 2:775942/1‑180 (MQ=37) cATTACCAGGCCGATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGCTTACGTTTG‑CCCTTTTTTTTTTTTCGGTCTTCCGGAAGGGGGTGAATACg > 2:287858/1‑150 (MQ=25) tACCAGGCCGATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTACGTTTG‑CCTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTGAATACGGTCACGCTTGATCGTCCCGCTCCAGTAGCGTCGCAGCAGG‑AATATCAGGCCTCCCGCAATGACCAGGCCGACGATAGGGGa < 1:862052/228‑1 (MQ=255) ccGATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTACCTTTT‑CCTTTTTTTTTTTTTCGATCTTCCGGGATGCGGTGAATACGGCTACGCTTTTTTGTCCCCCCCCCGGACCGTCCGCGCAGG‑AATATCAGGCCTCCCGCAATGACCCAGCCCACGGTCCGGGGAACCATCAGCGCGgggac > 2:380642/1‑238 (MQ=25) aTCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTACGTTTG‑CCTTTTTTTTTTTTTCGATCTTTCGGGATGCGGTGAATACGGGCACGCTTTTTTGTCCCCCCCCCGTAGCGTCGCAGCAGG‑AATATCAAGCCCCCCCCCAAGACCCGGGCGCCGAACGGGGGaacaaacaac > 2:862052/1‑226 (MQ=25) tttttGTCCGTCGTTCGCGCCGTGCGAAAACGCCCCGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTACGTTTG‑CCTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTGAATACGGTCACGCTTTTTCGTCCCGCTCCAGTAGCGTCGCAGCAGG‑AATATCAGGCCTCCCGCAATGACCAGGCCGACGAt < 1:279757/207‑1 (MQ=255) cgtcgtTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTACGTTTG‑CCTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTGAATACGGTCACGCTTTTTCGTCCCGCTCCAGTAGCGTCGCAGCAGG‑AATATCAGGCCTCCCGCAATGACCAGGCCGACGATAGGGGAAACAATCAGCGAGGAGAAAATTTTGGTCACTTCa < 1:805861/239‑1 (MQ=255) tcgtTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTACGTTTG‑CCTTTTTTTTTTTTTCGATTTTCCGGAAAGCGGGGAAAAAGGGCCCGCTTTTTTTTCCCCCCCCCGTAGGGGCGCAGCGGGAAATATCGGGCCCCCCCCAA‑AACCCGGGCCACGATAGGGGGAACa > 2:279757/1‑207 (MQ=19) cgtTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTACGTTTG‑CCTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTGAATACGGTCACGCTTTTTCGTCCCGCTCCAGTAGCGTCGCAGCAGG‑AATATCAGGCCTCCCGCAATGACCAGGCCGACGATAGGGGAAACAATCAGCGAGGAGAAAATTTTGGTCACTTCACGc < 1:443649/239‑1 (MQ=255) tCAGCGCAATACGCGTCCAGAATGGCGGTTTACGTTTG‑CCTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTGAATACGGTCACGCTTTTTCGTCCCGCTCCAGTAGCGTCGCAGCAGG‑AATATCAGGCCTCCCGCAATGACCAGGCCGACGATAGGGGAAACAATCAGCGAGGAGAAAATTTTGGTCACTTCACGCAGGTTTAACGCATCCATCACCGATGAGCCGGTTAACAGcgcg < 1:67534/239‑1 (MQ=255) cgcAATACGCGTCCAGAATGGCGGTTTACGTTTG‑CCTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTGAATACGGTCACGCTTTTTCGTCCCGc < 1:451848/95‑1 (MQ=255) cgcAATACGCGTCCAGAATGGCGGTTTACGTTTG‑CCTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTGAATACGGTCACGCTTTTTCGTCCCGCTCCAGTAGCGTCGCAGCAGG‑AATATCAGGCCTCCCGCAATGACCAGGCCGACGATAGGGGAAACAATCAGCGAGGAGAAAATTTTGGTCACTTCACGc < 1:71370/193‑1 (MQ=255) aCGCGTCCAGAATGGCGGTTTACGTTTG‑CCTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTGAATACGGTCACGCTTTTTCGTCCCGCTCCAGTAGCGTCGCAGCAGG‑AATATCAGGCCTCCCGCAATGACCAGGCCGACGATAGGGGAAACAATCAGCGAGGAGAAAATTTTGGTCACTTCACGCAGGTTTAACGCATCCATCACCGATGAGCCGGTTAACAGCGCGTTGGTTAAAc < 1:273100/239‑1 (MQ=255) gggTCCAGAATGGGGGTTTACGGTTG‑CCGTTTTTCTTTTTGCGATCTTCCGGAATGCGGTTAATACGGTCACGCTTTTTCGTCCCGCTCCAGTAGCGTCGCAGCAGG‑AATATCAGGCCTCCCGCAATGACCAGGCCGACGATAGGGGAAACAATCAGCGAGGAGAAAATTTTGGTCACTTCTCGCAGGTTTAACGCAGCCATCACCGATGAGCCGGTTAACAGCGCGTTGGTTAAACCg < 2:184752/237‑1 (MQ=255) gTCCAGAATGGCGGTTTACGTTTT‑CCTTTTTTTTTTTTTCGATCTTCCCGGATGCGGTGAATACGGTCACCCTTTTTCTTCCCGCTCCCGTAGCg > 2:451848/1‑95 (MQ=255) gTCCAGAATGGCGGTTTACGTTTG‑CCTTTTTTTTTTTTGCGATCCTCCCGAAAGGGGTGAATACGGTCACGCTTTTTTGTCCCGCTCCAGTAGCGTCGCAGCAGG‑AATATCAGGCCTCCCCCCATGACCCGGCCGACGATAGGGGAAACAAAAAGGGAGGGGAAAATTTTTGTCACCTCCCGCAGGGTTaaag > 2:71370/1‑191 (MQ=255) tCCAGAATGGCGGTTTACGTTTG‑CCTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTGAATACGGTCGCGCTTTTTCGTCCCGCTCCAGTAGCGTCGCAGCAGG‑AATATCAGGCCTCCCGCAATGACCAGGCCGACGATAGGGGAAACAATCAGCGAGGAGAAAATTTTGGTCACTTCACGCAGGTTTAACGCATCCATCACCGATg < 1:782169/207‑1 (MQ=255) ccTTTTTTCTTTTTGCGCTCTTCCGGAATGCGGTGAATACGGTCACGCTTTTTCGTCCCGCTCCAGTAGCGTCgcagca > 1:687063/1‑79 (MQ=255) ccTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTGAATACGGTCACGCTTTTTCGTCCCGCTCCAGTAGCGTCgcagca < 2:687063/79‑1 (MQ=255) tttttCTTTTTGCGATCTTCCGGAATGCGGTGAATACGGTCACGCTTTTTCGTCCCGCTCCAGTAGCGTCGCAGCAGG‑AATATCAGGCCTCCCGCAATGACCAGGCCGACGATAGGGGAAACAATCAGCGAGGAGAAAATTTTGGTCACTTCACGCAGGTTTAACGCATCCATCACCGATGAGCCGGTTAACAGCGCGTTGGTTAAACCGATGCCGATAATCGCACCAATCAAGGtgtg < 1:12797/239‑1 (MQ=255) tttCTTTTTGCGATCTTCCGGAATGCGGTGAATACGGTCACGCTTTTTCGTCCCGCTCCAGTAGCGTCGCAGCAGG‑AATATCAGGCCTCCCGCAATGACCAGGCCGACGATAGGGGAAACAATCAGCGAGGAGAAAATTTTgg > 2:63730/1‑143 (MQ=255) tttCTTTTTGCGATCTTCCGGAATGCGGTGAATACGGTCACGCTTTTTCGTCCCGCTCCAGTAGCGTCGCAGCAGG‑AATATCAGGCCTCCCGCAATGACCAGGCCGACGATAGGGGAAACAATCAGCGAGGAGAAAATTTTgg < 1:63730/143‑1 (MQ=255) | TGCAGGTAGTGTTCGAAGTTGGTAACGGCATCGCGGGTACGGGTAATTTCATAGCCGGACGCATTCATATTGACGACGAAGCCAGCAGGGGCAATCCCCACCAGTACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTACGTTTG‑CCTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTGAATACGGTCACGCTTTTTCGTCCCGCTCCAGTAGCGTCGCAGCAGG‑AATATCAGGCCTCCCGCAATGACCAGGCCGACGATAGGGGAAACAATCAGCGAGGAGAAAATTTTGGTCACTTCACGCAGGTTTAACGCATCCATCACCGATGAGCCGGTTAACAGCGCGTTGGTTAAACCGATGCCGATAATCGCACCAATCAAGGTGTG > NC_000913/3135548‑3136008 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |