New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3089881	93 (1.030)	4 (0.050)	4/342	5.7	4.9%	coding (127/498 nt)	yggI	Zn‑dependent metalloprotease‑related protein
	?	NC_000913	= 3090071	67 (0.780)					coding (317/498 nt)	yggI	Zn‑dependent metalloprotease‑related protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GATGAAAGGTCGTAAACTGCGCGAAATAGGCGCTCACGATTAATCTCCCCAAGCTTCCTCCCATCGCGGAGGAAGCCACCTCTTGCAGTCATCTTTTCTTCGCTCTATCCTCTGCCGCTATGAAAACATCCCGTCTCCCTATCGCCATCCAACAGGCCGTTATGCGTCGCCTGCGGGAAAAACTCGCCCAGGCCAACCTGAAGCTAGGGCGTAACTACCCGGAGCCAAAACTCTCTTACACCCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/3089636‑3089881 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acacccagcACGTTTTCCATCATCCACTTCCACTCTTTGCCATGTGGCGCTACGCGGCCGAAATGTTTCCATACCAGCAAATGTGCCAGTTCGTGCGGTACCACTTCTTCAATAAAAGCTTCACTGTTTTCCAACAGCAAAACGGGATTGAGGCGAATTTCATAGCTTTCCAGCCAGGCCGTTCCGGCGGAGGTTCCGCGCTGGGTGTAAGAGAGTTTTGGCTCCGGGTAGTTACGCCCTAGCTTCA  <  NC_000913/3090071‑3089834                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      GATGAAAGGTCGTAAACTGCGCGAAATAGGCGCTCACGATTAATCTCCCCAAGCTTCCTCCCATCGCGGAGGAAGCCACCTCTTGCAGTCATCTTTTCTTCGCTCTATCCTCTGCCGCTATGAAAACATCCCGTCTCCCTATCGCCATCCAACAGGCCGTTATGCGTCGCCTGCGGGAAAAACTCGCCCAGGCCAACCTGAAGCTAGGGCGTAACTACCCGGAGCCAAAACTCTCTTAC                                                                                                                                                                                                                                                       >  2:383372/1‑239       AGGTCGTAAACTGCGCGAAATAGGCGCTCACGATTAATCTCCCCAAGCTTCCTCCCATCGCGGAGGAAGCCACCTCTTGCAGTCATCTTTTCTTCGCTCTATCCTCTGCCGCTATGAAAACATCCCGTCTCCCTATCGCCATCCAACAGGCCGTTATGCGTCGCCTGCGGGAAAAACTCGCCCAGGCCAACCTGAAGCTAGGGCGTAACTACCCGGAGCCAAAACTCTCTTACACCCAG                                                                                                                                                                                                                                                 <  1:383372/239‑1                    CGCGAAATAGGCGCTCACGATTAATCTCCCCAAGCTTCCTCCCATCGCGGAGGAAGCCACCTCTTGCAGTCATCTTTTCTTCGCTCTATCCTCTGCCGCTATGAAAACATCCCGTCTCCCTATCGCCATCCAACAGGCCGTTATGCGTCGCCTGCGGGAAAAACTCGCCCAGGCCAACCTGAAGCTAGGGCGTAACTACCCGGAGCCAAAACTCTCTTACACC                                                                                                                                                                                                                                                    <  1:356375/223‑1                    CGCGAAATAGGCGCTCACGATTAATCTCCCCAAGCTTCCTCCCATCGCGGAGGAAGCCACCTCTTGCAGTCATCTTTTCTTCGCTCTATCCTCTGCCGCTATGAAAACATCCCGTCTCCCTATCGCCATCCAACAGGCCGTTATGCGTCGCCTGCGGGAAAAACTCGCCCAGGCCAACCTGAAGCTAGGGCGTAACTACCCGGAGCCAAAACTCTCTTACACC                                                                                                                                                                                                                                                    >  2:356375/1‑223                                                          CTCCCATCGCGGAGGAAGCCACCTCTTGCAGTCATCTTTTCTTCGCTCTATCCTCTGCCGCTATGAAAACATCCCGTCTCCCTATCGCCATCCAACAGGCCGTTATGCGTCGCCTGCGGGAAAAACTCGCCCAGGCCAACCTGAAGCTAGGGCGTAACTACCCGGAGCCAAAACTCTCTTA                                                                                                                                                                                                                                                        <  1:82738/181‑1                                                          CTCCCATCGCGGAGGAAGCCACCTCTTGCAGTCATCTTTTCTTCGCTCTATCCTCTGCCGCTATGAAAACATCCCGTCTCCCTATCGCCATCCAACAGGCCGTTATGCGTCGCCTGCGGGAAAAACTCGCCCAGGCCAACCTGAAGCTAGGGCGTAACTACCCGGAGCCAAAACTCTCTTA                                                                                                                                                                                                                                                        >  2:82738/1‑181                                                                                                                                                                         GCCTGCGGGAAAAACTCGCCCAGGCCAACCTGAAGCTAGGGCGTAACTACCCGGAGCCAAAACTCTCTTACACCCAGCACGTTTTCCATCATCCACTTCCACTCTTTGCCATGTGGCGCTACGCGGCCGAAATGTTTCCATACCAGCAAATGTGCCAGTTCGTGCGGTACCACTTCTTCAATAAAAGCTTCACTGTTTTCCAACAGCAAAACGGGATTGAGGCGAATTTCATAGCTTT                                                                                >  1:625997/1‑238                                                                                                                                                                          CCTGCGGGAAAAACTCGCCCAGGCCAACCTGAAGCTAGGGCGTAACTACCCGGAGCCAAAACTCTCTTACACCCAGCACGTTTTCCATCATCCACTTCCACTCTTTGCCATGTGGCGCTACGCGGCCGAAATGTTTCCATACCAGCAAATGTGCCAGTTCGTGCGGTACCACTTCTTCAATAAAAGCTTCACTGTTTTCCAACAGCAAAACGGGATTGAGGCGAATTTCATA                                                                                     >  1:1115194/1‑232                                                                                                                                                                          CCTGCGGGAAAAACTCGCCCAGGCCAACCTGAAGCTAGGGCGTAACTACCCGGAGCCAAAACTCTCTTACACCCAGCACGTTTTCCATCATCCACTTCCACTCTTTGCCATGTGGCGCTACGCGGCCGAAATGTTTCCATACCAGCAAATGTGCCAGTTCGTGCGGTACCACTTCTTCAATAAAAGCTTCACTGTTTTCCAACAGCAAAACGGGATTGAGGCGAATTTCATA                                                                                     <  2:1115194/232‑1                                                                                                                                                                             GCGGGAAAAACTCGCCCAGGCCAACCTGAAGCTAGGGCGTAACTACCCGGAGCCAAAACTCTCTTACACCCAGCACGTTTTCCATCATCCACTTCCACTCTTTGCCATGTGGCGCTACGCGGCCGAAATGTTTCCATACCAGCAAATGTGCCAGTTCGTGCGGTACCACTTCTTCAATAAAAGCTTCACTGTTTTCCAACAGCAAAACGGGATTGAGGCGAATTTCATAGCTTTCCAGC                                                                           <  2:625997/239‑1                                                                                                                                                                                                                                              ACACCCAGCACGTTTTCCATCATCCACTTCCACTCTTTGCCATGTGGCGCTACGCGGCCGAAATGTTTCCATACCAGCAAATGTGCCAGTTCGTGCGGTACCACTTCTTCAATAAAAGCTTCACTGTTTTCCAACAGCAAAACGGGATTGAGGCGAATTTCATAGCTTTCCAGCCAGGCCGTTCCGGCGGAGGTTCCGCGCTGGGTGTAAGAGAGTTTTGGCTCCGGGTAGTTACGCCC          <  1:763597/239‑1                                                                                                                                                                                                                                               CACCCAGCACGTTTTCCATCATCCACTTCCACTCTTTGCCATGTGGCGCTACGCGGCCGAAATGTTTCCATACCAGCAAATGTGCCAGTTCGTGCGGTACCACTTCTTCAATAAAAGCTTCACTGTTTTCCAACAGCAAAACGGGATTGAGGCGAATTTCATAGCTTTCCAGCCAGGCCGTTCCGGCGGAGGTTCCGCGCTGGGTGTAAGAGAGTTTTGGCTCCGGGTAGTTACGCCCT         >  2:970430/1‑239                                                                                                                                                                                                                                                 CCCAGCACGTTTTCCATCATCCACTTCCACTCTTTGCCATGTGGCGCTACGCGGCCGAAATGTTTCCATACCAGCAA                                                                                                                                                                         <  1:976528/77‑1                                                                                                                                                                                                                                                 CCCAGCACGTTTTCCATCATCCACTTCCACTCTTTGCCATGTGGCGCTACGCGGCCGAAATGTTTCCATACCAGCAA                                                                                                                                                                         >  2:976528/1‑77                                                                                                                                                                                                                                                  CCAGCACGTTTTCCATCATCCACTTCCACTCTTTGCCATGTGGCGCTACGCGGCCGAAATGTTTCCATACCAGCAAATGTGCCAGTTCGTGCGGTACCACTTCTTCAATAAAAGCTTCACTGTTTTCCAACAGCAAAACGGGATTGAGGCGAATTTCATAGCTTTCCAGCCAGGCCGTTCCGGCGGAGGTTCCGCGCTGGGTGTAAGAGAGTTTTTGCCCCGGGTAGTTACGCCCTA        >  1:576366/1‑237                                                                                                                                                                                                                                                      CACGTTTTCCATCATCCACTTCCACTCTTTGCCATGTGGCGCTACGCGGCCGAAATGTTTCCATACCAGCAAATGTGCCAGTTCGTGCGGTACCACTTCTTCAATAAAAGCTTCACTGTTTTCCAACAGCAAAACGGGATTGAGGCGAATTTCATAGCTTTCCAGCCAGGCCGTTCCGGCGGCGGTTCCGCGCTGGGTGTAAGAGAGTTTTGGCTCCGGGTAGTTACGCCCTAGCTTCA  >  1:840031/1‑239                                                                                                                                                                                                                                                      CACGTTTTCCATCATCCACTTCCACTCTTTGCCATGTGGCGCTACGCGGCCGAAATGTTTCCATACCAGCAAATGTGCCAGTTCGTGCGGTACCACTTCTTCAATAAAAGCTTCACTGTTTTCCAACAGCAAAACGGGATTGAGGCGAATTTCATAGCTTTCCAGCCAGGCCGTTCCGGCGGAGGTTCCGCGCTGGGTGTAAGAGAGTTTTGGCTCCGGGTAGTTACGCCCTAGCTTCA  >  2:796740/1‑239                                                                                                                                                                                                                                                      CACGTTTTCCATCATCCACTTCCACTCTTTGCCATGTGGCGCTACGCGGCCGAAATGTTTCCATACCAGCAAATGTGCCAGTTCGTGCGGTACCACTTCTTCAATAAAAGCTTCACTGTTTTCCAACAGCAAAACGGGATTGAGGCGAATTTCATAGCTTTCCAGCCAGGCCGTTCCGGCGGAGGTTCCGCG                                                 <  2:245472/192‑1                                                                                                                                                                                                                                                      CACGTTTTCCATCATCCACTTCCACTCTTTGCCATGTGGCGCTACGCGGCCGAAATGTTTCCATACCAGCAAATGTGCCAGTTCGTGCGGTACCACTTCTTCAATAAAAGCTTCACTGTTTTCCAACAGCAAAACGGGATTGAGGCGAATTTCATAGCTTTCCAGCCAGGCCGTTCCGGCGGAGGTTCCGCG                                                 >  1:245472/1‑192                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      GATGAAAGGTCGTAAACTGCGCGAAATAGGCGCTCACGATTAATCTCCCCAAGCTTCCTCCCATCGCGGAGGAAGCCACCTCTTGCAGTCATCTTTTCTTCGCTCTATCCTCTGCCGCTATGAAAACATCCCGTCTCCCTATCGCCATCCAACAGGCCGTTATGCGTCGCCTGCGGGAAAAACTCGCCCAGGCCAACCTGAAGCTAGGGCGTAACTACCCGGAGCCAAAACTCTCTTACACCCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/3089636‑3089881 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acacccagcACGTTTTCCATCATCCACTTCCACTCTTTGCCATGTGGCGCTACGCGGCCGAAATGTTTCCATACCAGCAAATGTGCCAGTTCGTGCGGTACCACTTCTTCAATAAAAGCTTCACTGTTTTCCAACAGCAAAACGGGATTGAGGCGAATTTCATAGCTTTCCAGCCAGGCCGTTCCGGCGGAGGTTCCGCGCTGGGTGTAAGAGAGTTTTGGCTCCGGGTAGTTACGCCCTAGCTTCA  <  NC_000913/3090071‑3089834

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.