Predicted mutation | ||||||
---|---|---|---|---|---|---|
evidence | seq id | position | mutation | annotation | gene | description |
RA | NC_000913 | 3,135,804 | T→G | I190L (ATT→CTT) | pitB ← | phosphate transporter |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 3,135,804 | 0 | T | G | 100.0% | 114.2 / NA | 40 | I190L (ATT→CTT) | pitB | phosphate transporter |
Reads supporting (aligned to +/- strand): ref base T (0/0); new base G (15/25); total (15/25) |
TACGGGTAATTTCATAGCCGGACGCATTCATATTGACGACGAAGCCAGCAGGGGCAATCCCCACCAGTACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTACGTTTGCCTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTGAATACGGTCACGCTTTTTCGTCCCGCTCCAGTAGCGTCGCAGCAGGAATATCA‑GGCCTCCCGCAATGACCAGGCCGACGATA‑GGGGAAACAATCAGCGAGGAGAAAATTTTGGTCACTTCACGCAGGTTTAACGCATCCATCACCGATGAGCCGGTTAACAGCGCGTTGGTTAAACCGATGCCGATAATCGCACCAATCAAGGTGTGCGAACTGGAGGCCGGTAAACCGAAGAACC > NC_000913/3135585‑3136037 | tacgggtaATTTCATAGCCGGACGCATTCATATTGACGACGAAGCCAGCAGGGGCAATCCCCACCAGTACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTACGTTTGCCTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTGAAGACGGTCACGCTTTTTCGt < 1:266166/238‑1 (MQ=255) acgggtaATTTCATAGCCGGACGCATTCATATTGACGACGAAGCCAGCAGGGGCAATCCCCACCAGTACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTACGTTTGCCTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTGAAGACGGTCACGCTTTTTCGTcc < 1:291556/239‑1 (MQ=255) cGCATTCATATTGACGACGAAGCCAGCAGGGGCAATCCCCACCAGTACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTACGTTTGCCTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTGAAGACGGTCACGCTTTTTCGTCCCGCTCCAGTAGCGTCgcagc < 1:90949/238‑1 (MQ=255) gCAATCCCCACCAGTACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTACGTTTGCCTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTGAAGACGGTCACGCTTTTTCGTCCCGCTCCAGTAGCGTCGCAGCAGGAATATCA‑GGCCTCCCGCAATGACCAGGc < 1:822654/238‑1 (MQ=255) cccACCAGTACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTACGTTTGCCTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTGAAGACGGTCACGCTTTTTCGTCCCGCTCCAGTAGCGTCgcagca < 1:342127/202‑1 (MQ=255) accaGTACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTACGTTTGCCTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTGAAGACGGTCACGCTTTTTCGTcc < 1:105032/178‑1 (MQ=255) ccAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTACGTTTGCCTTTTTTTTTTTTTTGGTCTTTCGGAAAGCGGGGAAGGCGGGCCCGCTTTTTTGTCCCGCTCCCGTAGCGTCGCCGCAGGAAAATCA‑g > 2:342127/1‑202 (MQ=37) aGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTACGTTTGCCTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTGAAGACGGTCACGCTTTTTCGTcc < 1:111986/169‑1 (MQ=255) aGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTGCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTACGTTTGCCTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTGAAGACGGTCACGCTTTTTCGTcc < 1:920441/169‑1 (MQ=255) gCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTACGTTTGCCTTTTTTTTTTTTTCGATCTTCCGGAAAGCGGGGGAGACGGTCACGCTTTTTTTTCCCGCTCCCGTa > 2:105032/1‑178 (MQ=37) gCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTACGTTTGCCTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTGAAGACGGTCACGCTTTTTCGTCCCGCTCCAGTAGCGTCGCAGCAGGAATATCA‑g < 1:636143/199‑1 (MQ=255) ggCCGATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTTCGTTTGCCTTTTTTTTTTTTTCGATCTTTCCGAATGCGGGGAAGACGGTCACCCCTTTTTCTCCCGCTCCCGtc > 2:920441/1‑168 (MQ=25) ggCCGATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTACGTTTGTCTTTTTTTTTTTTGCGATCTTTCGGGATGCGGGGAAGAAGGTCACGCTTTTTCTTTCCCCTcccgaa > 2:111986/1‑165 (MQ=37) gCCGATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGCTTTCGGTTGACCTTTTTTTTTTTTCGGTCCTCCGGAATGCGGGGAAGAAGGGCACGCCTTTTTGTTCCGCCCCAGTAGCCGCGCACCAGGGAAAACAGGGCCCCCCGCa > 2:636143/1‑200 (MQ=19) aTCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCACTACGCGTCCAGAATGGCGGGTTCTGTTTGCCCTTTTTTTTTTTGCGATTTTCCGGAATGCGGTGAAGGCGGTCACGCTTTTTTGTTCCGCCCCCCTAGCGTCGCAGCAAGGAGACAC‑GGCCTCCCGCCACGACCACGCCGCCGCGC‑AGGGGAACAATCACCGGCGAGaaa > 2:1046856/1‑237 (MQ=19) aTCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTTCGTTTGCCTTTTTTCTTTTTTTGATCTTCCGGAATGCGGGGAAGACGGGCACGCTTTTTTGTCCCCCTCCCGGAGCGTCGCCGCAGGAAAAATA‑GGGCCCCCGCCACGACCCAGCCGGCCAGA‑GGGGGAAAAAAAAGCGGGGGGaaaaa > 2:290234/1‑238 (MQ=21) aTCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTACGTTTGCCTTTTTTTTTTTTGTGATCTTCCGGAATGCGGGGAAGACGGGCACGCTTTTTTGTTCCGCTCCAGTAGCGTCGCAGCAGGCATATAA‑GGACCCCCGCCATGACCAAGCCGTCGAGAGGGGGAAACAA‑CATGGAGGAGaaaaa > 2:305180/1‑238 (MQ=37) tCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGATTACGGTTTCCTTTTTTTTTTTTTGGATCTTTCGGAATGCGGGGAAGAAGGGCAAGATTTTTTGTCCCGCTCCAGTAGCGGCGCGCCAGGAACATTA‑GGCCTCCCGCCAAGAACACGCCGACGATA‑GGGGGGAAAATAAGCGAGGAGAAAAtt > 2:909491/1‑239 (MQ=25) ttttGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTACGTTTGCCTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTGAAGACGGTCACGCTTTTTCGTCCCGCTCCAGTAGCGTCGCAGCAGGAATATCA‑GGCCTCCCGCAATGACCAGGCCGACGATA‑GGGGAAACAATCAGCGAGGAGAAAATTTTGGt < 1:1119857/239‑1 (MQ=255) tcgtTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTACGTTTGCCTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTGAAGACGGTCACGCTTTTTCGTCCCGCTCCAGTAGCGTCGCAGCAGGAATATCA‑GGCCTCCCGCAATGACCAGGCCGACGATA‑GGGGAAACAATCAGCGAGGAGAAAATTTTGGTCACTTCACg < 1:410707/239‑1 (MQ=255) cgtTCGCGGCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTACGTTTGCCTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTGAAGACGGTCACGCTTTTTCGTCCCGCTCCAGTAGCGTCGCAGCAGGAATATCA‑GGCCTCCCGCAATGACCAGGCCGACGATA‑GGGGAAACAATCAGCGAGGAGAAAATTTTGGTCACTTCACg < 2:679035/238‑1 (MQ=255) cgggCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTACGTTTGCCTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTGAAGACGGTCACGCTTTTTCGTCCCGCTCCAGTAGCGTCGCAGCAGGAATATCA‑GGCCTCCCGCAATGACCAGGCCGACGATA‑GGGGAAACAATCAGCGAGGAGAAAATTTTGGTCACTTCACGCAGGTTTAAc < 1:558873/236‑1 (MQ=255) cGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTACGTTTGCCTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTGAAGACGGTCACGCTTTTTCGTCCCGCTCCAGTAGCGTCGCAGCAGGAATATCA‑GGCCTCCCGCAATGACCAGGCCGACGATA‑GGGGAAACAATCAGCGAGGAGAAAATTTTGGTCACTTCACGCAGGTTTAAc < 1:290234/239‑1 (MQ=255) gAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTACGTTTGCCTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTGAAGACGGTCACGCTTTTTCGTCCCGCTCCAGTAGCGTCGCAGCAGGAATATCA‑GGCCTCCCGCAATGACCAGGCCGACGATA‑GGGGAAACAATCAGCGAGGAGAAAATTTTGGTCACTTCACGCAGGTTTAACGcatc < 2:550571/239‑1 (MQ=255) cGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTACGTTTGCCTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTGAAGACGGTCACGCTTTTTCGTcc < 2:580990/105‑1 (MQ=255) aaaCAATCAGCGCAATACGCGTCCAGAATGGCGGTTTACGTTTGCCTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTGAAGACGGTCACGCTTTTTCGTCCCGCTCCAGTAGCGTCGCAGCAGGAATATCA‑GGCCTCCCGCAATGACCAGGCCGACGATA‑GGGGAAACAATCAGCGAGGAGAAAATTTTGGTCACTTCACGCAGGTTTAACGCATCCATCACCGATGAGCCGGTTaa < 1:305180/238‑1 (MQ=255) cAGCGCAATACGCGTCCAGAATGGCGGTTTTCGGTTTCCTTTTTTTTTTTTTCGGTCTTCCGGGATGCGGGGAAGCCGGGCACGCTTTTTCTTCCCGCTCCAGTa > 1:580990/1‑105 (MQ=255) cAGCGCAATACGCGTCCAGAATGGCGGTTTACGTTTTCCTTTTTTTTTTTTGCGATCTTCCCGGATGCGGTGAAGACGGTCACGCTTTTTTTTTCCGCCCCAGTAGCGTCGCAGCAGGAATATCA‑GGCCTCCCCCAATGACCCGGCCGACGAAA‑GGGGAAACAATCAGCGAGGGGAAAATTTTGGTCCCTTCACGCAGGGTTTACGCATCCATCACCGAACAGCCGGTTAACAGCGCGt > 2:83881/1‑239 (MQ=255) gcgTCCAGAATGGCGGTTTACGTTTGCCTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTGAAGACGGTCACGCTTTTTCGTCCCGCTCCAGTAGCGTCGCAGCAGGAATATCA‑GGCCTCCCGCAATGACCAGGCCGACGATA‑GGGGAAACAATCAGCGAGGAGAAAATTTTGGTCACTTCACGCAGGTTTAACGCATCCATCACCGATGAGCCGGTTAACAGCGCGTTGGTTAAACCg < 1:909491/239‑1 (MQ=255) gtGGCGGTTTACGTTTGCCTTTTTTCTTTGTGCGATCTTCCGGAATGCGGGGAAGACGGTCACGCTTTTTCGTCCCGCTCCAGTAGCGTAGCAGCATGAATATCA‑GGCCTCCCGCAATGACCAGGACGACGATA‑GGGGAAACAATCAGCGAGGAGAAAATTTTGGTCACTTCACGCAGGTTTAACGCAGCCATCACCGATGAGCCGGTTAACAGCGCGTTGGTTAAACCGATGcc < 2:313607/234‑1 (MQ=255) ttACGTTTGCCTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTGAAGACGGTCACGCTTTTTCGTCCCGCTCCAGTAGCGTCGCAGCAGGAATATCA‑GGCCTCCCGCAATGACCAGGCCGACGATA‑GGGGAAACAATCAGCGAGGAGAAAATTTTGGTCACTTCACGCAGGTTTAACGCATCCATCACCGATGAGCCGGTTAACAGCGCGTTGGTTAAACCGATGCCGATAATCGCAc < 1:543233/238‑1 (MQ=255) ccTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTGAAGACGGTCACGCTTTTTCGTCCCGCTCCAGTAGCGTCGCAGCAGGAATATCA‑GGCCTCCCGCAATGACCAGGCCGACGATA‑GGGGAAACAATCAGCGAGGAGAAAATTTTgg > 1:175102/1‑148 (MQ=255) ccTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTGAAGACGGTCACGCTTTTTCGTCCCGCTCCAGTAGCGTCGCAGCAGGAATATCA‑GGCCTCCCGCAATGACCAGGCCGACGATA‑GGGGAAACAATCAGCGAGGAGAAAATTTTgg < 2:175102/148‑1 (MQ=255) cTTTTTTCTTTTTGCGATTTTCCGGAAGGCGGTGAAGACGGTCACGCTTTTTCGTCCCGCTCCAGTAGCGTCGCAGCAGGAATATCA‑GGCCTCCCGCAATGACCAGGCCGACGATA‑GGGGAAACAATCAGCGAGGAGAAAATTTTGGTCACTTCACGCAGGTTTAACGCATCCATCACCGATGAGCCGGTTAACAGCGCGTTGGTTAAACCGATGCCGATAATCGCACCAATCAAGgt < 2:902809/238‑1 (MQ=255) tttCTTTTTGCGATCTTCCGGAATGCGGTGAAGACGGTCACGCTTTTTCGTCCCGCTCCAGTAGCGTCGCAGCAGGAATATCA‑GGCCTCCCGCAATGACCAGGCCGACGATA‑GGGGAAACAATCAGCGAGGAGAAAATTTTGGTCACTTCACGCAGGTTTAACGCATCCATCACCGATGAGCCGGTTAACAGCGCGTTGGTTAAACCGATGCCGATAATCGCACCAATCAAGGTGTGCg < 2:1110031/239‑1 (MQ=255) tCTTCCGGAATGCGGTGAAGACGGTCACGCTTTTTCGTCCCGCGCCAGTAGCGTCGCAGCAGGAATATCA‑GGCCTCCCGCAATGACCAGGCCGACGATA‑GGGAAAACAATCAGCGAGGAGAAAATTTTGGTCACTTCACGCAGGTTTAACGCATCCATCACCGATGAGCCGGTTAACAGCGCGTTGGTTAAACCGATGCCGATAATCGCACCAATCAAGGTGTGCGAACTGGAGGCCg < 1:909567/238‑1 (MQ=255) tGCGGTGAAGACGGTCACGCTTTTTCGTCCCGCTCCAGTAGCGTCGCAGCAGGAATATCA‑GGCCTCCCGCAATGACCAGGCCGACGATA‑GGGGAAACAATCAGCGAGGAGAAAATTTTGGTCACTTCACGCAGGTTTAACGCATCCATCACCGATGAGCCGGTTAACAGcgcg < 2:23902/173‑1 (MQ=255) tGCGGTGAAGACGGTCACGCTTTTTCGTCCCGCTCCAGTAGCGTCGCAGCAGGAATATCA‑GGCCTCCCGCAATGACCAGGCCGACGATA‑GGGGAAACAATCAGCGAGGAGAAAATTTTGGTCACTTCACGCAGGTTTAACGCATCCATCACCGATGAGCCGGTTAACAGcgcg > 1:23902/1‑173 (MQ=255) gCGGTGAAGACGGTCACGCTTTTTCGTCCCGCTCCAGTAGCGTCGCAGCAGGAATATCA‑GGCCTCCCGCAATGACCAGGCCGACGATA‑GGGGAAACAATCAGCGAGGAGAAAATTTTGGTCACTTCACGCAGGTTTAACGCATCCATCACCGATGAGCCGGTTAACAGCGCGTTGGTTAAACCGATGCCGATAATCGCACCAATCAAGGTGTGCGAACTGGAGGCCGGTAAACCgaaga > 2:636398/1‑239 (MQ=255) gTGAAGACGGTCACGCTTTTTCGTCCCGCTCCAGTAGCGTCGCAGCAGGAATATCA‑GGCCTCCCGCAATGACCAGGCCGACGATA‑GGGGAAACAATCAGCGAGGAGAAAATTTTGGTCACTTCACGCAGGTTTAACGCATCCATCACCGATGAGCCGGTTAACAGCGCGTTGGTTAAACCGATGCCGATAATCGCACCAATCAAGGTGTGCGAACTGGAGGCCGGTAAACCGAAGAAcc > 1:407149/1‑239 (MQ=255) | TACGGGTAATTTCATAGCCGGACGCATTCATATTGACGACGAAGCCAGCAGGGGCAATCCCCACCAGTACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTACGTTTGCCTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTGAATACGGTCACGCTTTTTCGTCCCGCTCCAGTAGCGTCGCAGCAGGAATATCA‑GGCCTCCCGCAATGACCAGGCCGACGATA‑GGGGAAACAATCAGCGAGGAGAAAATTTTGGTCACTTCACGCAGGTTTAACGCATCCATCACCGATGAGCCGGTTAACAGCGCGTTGGTTAAACCGATGCCGATAATCGCACCAATCAAGGTGTGCGAACTGGAGGCCGGTAAACCGAAGAACC > NC_000913/3135585‑3136037 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 6 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |