| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 162,349 | A→C | Y82S (TAC→TCC) | hrpB → | putative ATP‑dependent helicase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 162,349 | 0 | A | C | 97.8% | 121.8 / ‑6.4 | 46 | Y82S (TAC→TCC) | hrpB | putative ATP‑dependent helicase |
| Reads supporting (aligned to +/- strand): ref base A (0/1); new base C (19/26); total (19/27) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CGTTGCTGCCGTCTTACCTGAATTACTTACCGCTCTCGATTGTGCGCCGCAGGTATTATTAAGTGCGCCGACCGGGGCCGGGAAAT‑CAACCTGGCTGCCGCTGCAACTGCTGGCGCATCCCGGCATTAACGGGAAAATTATCCTGCTGGAGCCGCGTCGTCTGGCGGCGCGTAACGTCGCGCAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTACCGGATGCGTGCGCAAAACTGCGTCGGGCCGAATACCCGCCTGGAAGTGGTTACCGAAGGCGTGCTGACGCGCATGATCCAGCGTGACCCGGAACTGAGCGGTGTTGGACTGGTGATCCTTGATGAATTTCATGAGCGCAGCTTGCAGGCGGATTTGGCGTTGGCGCTGTTACTCGATGTGCAACAAGGTCTGCGTGATGACCTTAAACTGCTGATTATGTCGGCTAC > NC_000913/162119‑162577 | cGTTGCTGCCGTCTTACCTGAATTACTTACCGCTCTCGATTGTGCGCCGCAGGTATTATTAAGTGCGCCGACCGGGGCCGGGAAAT‑CAACCTGGCTGCCGCTGCAACTGCTGGCGCATCCCGGCATTAACGGGAAAATTATCCTGCTGGAGCCGCGTCGTCTGGCGGCGCGTAACGTCGCGCAACGGCTGGCGGAGCTGCTTAACGAAAAGCCCGGCGATACCGTTGGCGCCCGGGtgc > 2:513852/1‑239 (MQ=255)cGTTGCGGCCTTCTTACCGGAATTCCTTCCCGCTCTCGATTGTGCGCCGAAGGTATTATTAAGTGCGCCGACCGGGGCCGGGAAAT‑CAACCTGGCTGCGGCTGCAACTGCTGGCGCATCCCGGCATTAACGGGAAAATTATCCTGCTGGTGCCGCGACGTCTGGCGGCGCGTAACGTCGCGCAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGAtgc < 2:134942/239‑1 (MQ=255) tgctgcCGTCTTACCTGAATTACTTACCGCTCTCGATTGTGCGCCGCAGGTATTATTAAGTGCGCCGACCGGGGCCGGGAAAT‑CAACCTGGCTGCCGCTGCAACTGCTGGCGCATCCCGGCATTAACGGGAAAATTATCCTGCTGGAGCCGCGACGTCTGGCGGCGCGTAACGTCGCGCAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATCACGGTGGCTCTCGGAtgggtg > 2:1127502/1‑239 (MQ=255) tgcCGTCTTACCTGAATTACTTACCGCTCTCGATTGTGCGCCGCAGGTATTATTAAGTGCGCCGACCGGGGCCGGGAAAT‑CAACCTGGCTGCCGCTGCAACTGCTGGCGCATCCCGGCATTAACGGGAAAATTATCCTGCTGGAGCCGCGTCGTCTGGCGGCGCGTAACGTCGCGCAACGGCTGGCGGAGCTGCTTAACGAAACGCCAGGCGATACCGTTGGCTCCCGGATGCGTgcgc > 1:683950/1‑239 (MQ=255) tgcCGTCTTACCAGAATTACGTCGCGCTCTCGATTGTGCGCCGCAGGTATTATTAAGTGCGCCGACCGGGGCCGGGAAAT‑CAACCTGGCTGCCGCTGCAACTGCTGGCGCATCCCGGCATTAACGGGAAAATTAGCCTGCTGGAGCCGCGTCGTCTGGCGGCGCGTAACGTCGCGCAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGAtgcgtgcg < 2:356801/238‑1 (MQ=255) ccGTCTTACCTGAATTACTTACCGCTCTCGATTGTGCGCCGCAGGTATTATTAAGTGCGCCGACCGGGGCCGGGAAAT‑CAACCTGGCTGCCGCTGCAACTGCTGGCGCATCCCGGCATTAACGGGAAAATTATCCTGCTGGAGCCGCGTCGTCTGGCGGCGCGTAACGTCGCGCAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCGCaa > 1:946739/1‑239 (MQ=255) tGAATTACTTACCGCTCTCGATTGTGCGCCGCAGGTATTATTAAGTGCGCCGACCGGGGCCGGGAAAT‑CAACCTGGCTGCCGCTGCAACTGCTGGCGCATCCCGGCATTAACGGGAAAATTATCCTGCTGGAGCCGCGTCGTCTGGCGGCGCGTAACGTCGCGCAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCGCAAAACTGCGTCg < 2:946739/239‑1 (MQ=255) tGAATTACTTACCGCTCTCGATTGTGCGCCGCAGGTATTATTAAGTGCGCCGACCGGGGCCGGGAAAT‑CAACCTGGCTGCCGCTGCAACTGCTGGCGCATCCCGGCATTAACGGGAAAATTATCCTGCTGGAGCCGCGTCGTCTGGCGGCGCGTAACGTCGCGCAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGACACCGTTGGCGCCCGGATGGGGGGGCAAAACAGccgcg > 2:280856/1‑235 (MQ=255) tctcGATTGTGCGCCGCAGGTATTATTAAGTGCGCCGACCGGGGCCGGGAAAT‑CAACCTGGCTGCCGCTGCAACTGCTGGCGCATCCCGGCATTAACGGGAAAATTATCCTGCTGGAGCCGCGTCGTCTGGCGGCGCGTAACGTCGCGCAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGGTACCGGTGGCTCCCGGGTGCGTGCGCAAAACTGCGCCGGGCCGAATACACg > 2:980049/1‑237 (MQ=255) tcGATTGTGCGCCGCAGGTATTATTAAGTGCGCCGACCGGGGCCGGGAAAT‑CAACCTGGCTGCCGCTGCAACTGCTGGCGCATCCCGGCATTAACGGGAAAATTATCCTGCTGGAGCCGCGTCGTCTGGCGGCGCGTAACGTCGCGCAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCGCAAAACTGCGTCGGGCCGAATACCCg > 1:774544/1‑235 (MQ=255) cAGGTATTATTAAGTGCGCCGACCGGGGCCGGGAAAT‑CAACCTGGCTGCCGCTGCAACTGCTGGCGCATCCCGGCATTAACGGGAAAATTATCCTGCTGGAGCCGCGTCGTCTGGCGGCGCGTAACGTCGCGCAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCGCAAAACTGCGTCGGGCCGAATACCCGCCTGGAAGTGGTTACCGa > 1:394061/1‑239 (MQ=255) ttaAGTGCGCCGCCCGGGGCCGGAAAAT‑CACCCTGGCTGCCGCTGCAACTGCTGGCGCATCCCGGCATTACCGGGAAAATTATCCGGCGGGAGCCGCGTCGTCTGGCGGCGCGTAACGTCGCGCAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGGTGCGTGCGCAAAACTGCGTCGGGCCGAATACCCGCCTGGAAGTGGTTACCGAAGGCGTGCt < 2:729545/239‑1 (MQ=255) aggggcgcCGACCGGGGCGGAGAATG‑CAACCAGGCGCCCCATGAAAGTGCTGGCCGCTCCCGGCATTAACGGGAAAATTTTCCGGCTGGGGCCGCGTCGTCGGGCGGCGCGTAACGTCGCGCAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCGAAAAACTGCGTCGGGCCGAATACCCGCCTGGAAGTGGTTACCGAAGGCGTGCTGa < 2:1045746/235‑1 (MQ=255) aaGTGCGCCGACCGGGGCCGGAAAAT‑CAACCGGGCTGCCGCTGCAACTGCTGGCGCATCCCGGCATTAACGGGAAAATTACCCTGCTGGAGCCGCGTCGTCTGGCGGCGCGTAACGTCGCGCAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCGCAAAACTGCGTCGGGCCGAATACCCGCCTGGAAGTGGTTACCGAAGGCGTGCTGa < 2:1073179/239‑1 (MQ=255) cgcCGACCGGGGCCGGGAAAT‑CAACCTGGCTGCCGCTGCAACTGCTGGCGCATCCCGGCATTAACGGGAAAATTATCCTGCTGGAGCCGCGTCGTCTGGCGGCGCGTAACGTCGCGCAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCGCAAAACTGCGTCGGGCCGAATACCCGCCTGGAAGCGGTTACCGCAGGCGCGCTGAcccg > 1:112971/1‑238 (MQ=255) ccGACCGGGGCCGGGAAAT‑CAACCTGGCTGCCGCTGCAACTGCTGGCGCATCCCGGCATTAACGGGAAAATTATCCTGCTGGAGCCGCGTCGTCTGGCGGCGCGTAACGTCGCGCAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCGCAAAACTGCGTCGGGcc < 2:261054/194‑1 (MQ=255) ccGACCGGGGCCGGGAAAT‑CAACCTGGCTGCCGCTGCAACTGCTGGCGCATCCCGGCATTAACGGGAAAATTATCCTGCTGGAGCCGCGTCGTCTGGCGGCGCGTAACGTCGCGCAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCGCAAAACTGCGTCGGGcc > 1:261054/1‑194 (MQ=255) cGGGAAATCCAACCGGGCGGCCGCTGCACGTGCTGGCGCATCCCGGCATTACCGGGAAATTTATCCTGCGGGGGCCGCGTCGTCGGGCGGCGCGTAACGTCGCGCAACGGCTGGCGGGGCTGCTTAACGAAAAGCCCGGCGATACCGTTGGCTCCCGGGTGAGAGGGCAAAACGGGGCAGGGCCGAATGCCCGCCTGGAAGTGGTTCCCGAAGGCGTGCTGACGCGCATGACCCAGca < 2:184752/238‑2 (MQ=255) aaaT‑CAACCTGGCTGCCGCTGCAACTGCTGGCGCATCCCGGCATTAACGGGAAAATTATCCTGCTGGAGCCGCGTCGTCTGGCGGCGCGTAACGTCGCGCAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCGCAAAACTGCGTCGGGCCGAATACCCGCCTGGAAGTGGTTACCGAAGGCGTGCTGACGCGCATGATCCAGCGTGAcc < 2:394061/238‑1 (MQ=255) tGGCTGCAGCTGCAACTGCTGGCTCGCCCGGGCATAAACGGGAAATTTATCCGCCGGGAGCCGCGTCGTCTGGCGGCGCGTAACGTCGCGCAACGGCTGGGGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGATGCGGGGGCAAAACGGCGTCGGGCCGAATACCCGCCTGGAAGTGGTTACCGAAGGCGTGCTGACGCGCATGATCCAGCGTGACCCGGAACTGAg < 2:361004/239‑1 (MQ=255) ggtcTGCCGCTGCAACTGCTGCCGCAGCCCGGCATATACGGGAAAATTATCCTGCTGGGGCCGCGTCGTCGGGCGGCGCGTACCGTCGCGCAGCGGCTGGGGGAGCTGCTTAACGAAAAGCCGGGCGATACCGTTGGCTCCCGGATGCGTGCGGAAAACTGCGTCGGGCCGAATCCCCGCCTGGAAGTGGTTACCGAAGGCGTGCTGACGCGCATGATCCAGCGTGACCCGGAACTGAg < 2:1109785/236‑1 (MQ=255) gggCTGCCGCGGCACCTGCTGGCGCATCCCGGCATTAACGGGAAAATTATCCTGCTGGGGCCGCGTCGTCTGGCGGCGCGTAACGTCGCGCACCGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCGGGATGCGTGCGCAAAACTGCGTCGGGCCGAATACCCGCCTGGAAGTGGTTACCGAAGGCGTGCTGACGCGCATGATCCAGCGTGACCCGGAACTGAg < 1:819283/238‑1 (MQ=255) gCTGCAACTGCTGGCGCCTCCCGGCATTAACGGGAAAATTATCCTGCTGGAGCCGCGTCGTCTGGCGGCGCGTAACGTCGCGCAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCGCAAAACTGCGTCGGGCCGAATCCCCGCCTGGAAGTGGTTACCGAAGGCGTGCTGACGCGCATGATCCAGCGTGACCCGGAACTGAGCGGTGTTg < 1:280856/239‑1 (MQ=255) ggCGCATCCCGGCATTAACGGGAAAATTATCCTGCTGGAGCCGCGTCGTCTGGCGGCGCGTAACGTCGCGCAACGGCTGGGGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCGCAAAACTGCGTCGGGCCGAATACCCGCCTGGTGGTGGTTACCGAAGTCGTCCTGGCGCGCCTGAACCAGCTGGACCCGGAACTGATCGGTGTTGGACTGGTGAt > 2:789408/1‑237 (MQ=255) aaTTACCCTGCTGGGGCCGCGTCGTCTGGGGGCGCGTAACGTCGCGCAACGGCTGGCGGGGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCGCAAAACTGCGTCGGGCCGAATACCCGCCTGGAAGTGGTTACCGAAGGCGTGCTGACGCGCATGATCCAGCGTGACCCGGAACTGAg < 2:279043/195‑1 (MQ=255) ctgGAGCCGCGTCGTCTGGCGGCGCGTAACGTCGCGCAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCGCAAAACTGCGTCGGGCCGAATACCCGCCTGGAAGTGGTTACCGAAGGCGTGCTGACGCGCATGATCCAGCGTGACCCGGAACTGAGCGGTGTTGGa > 1:279043/1‑195 (MQ=255) gtcgtcTGGCGGCGCGTAACGTCGCGCAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCGCAAAACTGCGTCGGGCCGAATACCCGCCTGGAAGTGGTTACCGAAGGCGTGCTGACGCGCATGATCCAGCGTGACCCGGAACTGAGCGGTGTTGGa < 2:55392/185‑1 (MQ=255) gtcgtcTGGCGGCGCGTAACGTCGCGCAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCGCAAAACTGCGTCGGGCCGAATACCCGCCTGGAAGTGGTTACCGAAGGCGTGCTGACGCGCATGATCCAGCGTGACCCGGAACTGAGCGGTGTTGGa > 1:55392/1‑185 (MQ=255) gtcgtcTGGCGGCGCGTAACGTCGCGCAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCGCAAAACTGCGTCGGGCCGAATACCCGCCTGGAAGTGGTTACCGAAGGCGTGCTGACGCGCATGATCCAGCGTGACCCGGAACTGAGCGGTGTTGGACTGGTGATCCTTGATGAATTTCATGAGCGCAGCTTGCAGGCGGATttggcgtt < 1:896803/238‑1 (MQ=255) gttggggggggcgAAACGTCCCGAACGGGGTGGCGGAGCTTGTAAACGAAAGGCCAGGCGATCCCGTTGGCCACCGGGTGCGTGCGCAAAACTGCGTCGGGCCGAATCCCCGCCTGGAAGTGGTTACCGAAGGCGTGCTGACGCGCATGATCCAGCGTGACCCGGAACTGAGCGGTGTTGGACTGGTGATCCTTGATGAATTTCATGAGCGCAGCTTGCAGGCGGATttggcgttggcg < 2:885899/229‑1 (MQ=255) gtcTGGCGGCGCGTAACGTCGCGCAGCGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCGCAAAACGGCGTCGGGCCGAATACCCGCCTGGAAGTGGTTACCGAAGGCGTGCTGACGCGCATGATCCAGCGTGACCCGGAACTGAGCGGTGTTGGACTGGTGATCCTTGATGAATTTCATGAGCGCAGCTTGCAGGCGGATttggcgttggcg < 1:980049/239‑1 (MQ=255) gtcTGGCGGCGCGTAACGTCGCGCAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCGCAAAACTGCGTCGGGCCGAATCCCCGCCTGGAAGTGGTTACCGAAGGCGTGCTGACGCGCATGATCCAGCGTGACCCGGAACTGAGCGGTGTTGGACTGGTGATCCTTGATGAATTTCATGAGCGCAGCTTGCAGGCGGATttggcgttggcg < 1:513852/239‑1 (MQ=255) cgcgTAACGTCGCGCACCGGCTGGCGGCGCTGCTTAACGAAAGGCCAGGCGATACCGTGGGCTCCCGGATGCGTGCGCAAAACTGCGTCGGGCCGAATACCCGCCTGGAAGTGGTTACCGAAGGCGTGCTGACGCGCATGATCCAGCGTGACCCGGAACTGAGCGGTGTTGGACTGGTGATCCTTGATGAATTTCATGAGCGCAGCTTGCAGGCGGATTTGGCGTTGGCGCTGTTACt < 2:88196/238‑1 (MQ=255) cgcgTAACGTCGCGCAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCGCAAAACTGCGTCGGGCCGAATACCCGCCTGGAAGTGGTTACCGAAGGCGTGCTGACGCGCATGATCCAGCGTGACCCGGAACTGAGCGGTGTTGGACTGGTGTTCCTTGATGAATTTCATGAGCGCAGCTTGCTGGCGGATTTGGCGTTGGCGCGGTTACTc > 2:398779/1‑239 (MQ=255) agcgTACCGCCGCGCAACGGCTGGCGGGGCTGCTAAACGACAAGCCAGGCGATACCGTTGGCGCCCGGATGCGTGCGCAAACCTGCGTCGGGCCGAATCCCCGCCTGGAAGTGGTTACCGAAGGCGTGCTGACGCGCATGATCCAGCGTGACCCGGAACTGAGCGGTGTTGGACTGGTGATCCTTGATGAATTTCATGAGCGCAGCTTGCAGGCGGATTTGGCGTTGGCGCTGTTACt < 2:683950/237‑1 (MQ=255) aaCGGCGCGCAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCGCAAAACTGCGTCGGGCCGAATCCCCGCCTGGAAGTGGTTACCGAAGGCGTGCTGACGCGCATGATCCAGCGTGACCCGGAACTGAGCGGTGTTGGACTGGTGATCCTTGATGAATTTCATGAGCGCAGCTTGCAGGCGGATTTGGCGTTGGCGCTGTTACTCGAtg < 1:141635/238‑1 (MQ=255) gctTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCGCAAAACTGCGTCGGGCCGAATACCCGCCTGGAAGTGGTTACCGAAGGCGTGCTGACGCGCATGATCCAGCGTGACCCGGAACTGAGCGGTGTTGGACTGGTGATCCTTGATGAATTTCATGAGCGCAGCTTGCAGGCGGATTTGGCGTTGGCGCTGTTACTCGATGTGCAACAAGGTCTGCGTGATGACCTTa < 1:1127502/239‑1 (MQ=255) aaaaGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCGCAAAACTGCGTCGGGCCGAATACCCGCCTGGAAGTGGTTACCGAAGGCGTGCTGACGCGCATGATCCAGCGTGACCCGGAACTGAGCGGTGTTGGACTGGTGATCCTTGATGAATTTCAt > 1:160326/1‑158 (MQ=255) aaaaGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCGCAAAACTGCGTCGGGCCGAATACCCGCCTGGAAGTGGTTACCGAAGGCGTGCTGACGCGCATGATCCAGCGTGACCCGGAACTGAGCGGTGTTGGACTGGTGATCCTTGATGAATTTCAt < 2:160326/158‑1 (MQ=255) aGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCGCAAAACTGCGTCGGGCCGAATACCCGCCTGGAAGTGGTTACCGAAGGCGTGCt > 1:566604/1‑88 (MQ=255) aGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCGCAAAACTGCGTCGGGCCGAATACCCGCCTGGAAGTGGTTACCGAAGGCGTGCt < 2:566604/88‑1 (MQ=255) ccGTTGGCTCCCGGATGCGTGCGCAAAACTGCGTCGGGCCGAATACCCGCCTGGAAGTGGTTACCGAAGGCGTGCTGACGCGCATGATCCAGCGTGACCCGGAACTGAGCGGTGTTGGACTGGTGATCCTTGATGAATTTCATGAGCGCAGCTTGCAGGCGGATTTGGCGTTGGCGCTGTTACTCGAtgt < 2:1177709/190‑1 (MQ=255) ccGTTGGCTCCCGGATGCGTGCGCAAAACTGCGTCGGGCCGAATACCCGCCTGGAAGTGGTTACCGAAGGCGTGCTGACGCGCATGATCCAGCGTGACCCGGAACTGAGCGGTGTTGGACTGGTGATCCTTGATGAATTTCATGAGCGCAGCTTGCAGGCGGATTTGGCGTTGGCGCTGTTACTCGAtgt > 1:1177709/1‑190 (MQ=255) ttGGCTCCCGGATGCGTGCGCAAAACTGCGTCGGGCCGAATACCCGCCTGGAAGTGGTTACCGAAGGCGTGCTGACGCGCATGATCCAGCGTGACCCGGAACTGAGCGGTGTTGGACTGGTGATCCTTGATGAATTTCATGAGCGCAGCTTGCAGGCGGATTTGGCGTTTGCGCTGTTACTCGATGTGCAACAAGGTCTGCGTGATGACCTTTAACTGCTGACTATGTCGGCTAc > 2:982996/1‑235 (MQ=255) ttGGCTCCCGGATGCGTGCGCAAAACTGCGTCGGGCCGAATACCCGCCTGGAAGTGGTTACCGAAGGCGTGCTGACGCGCATGATCCAGCGTGACCCGGAACTGAGCGGTGTTGGACTGGTGATCCTTGATGAATTTCATGAGCGCAGCTTGCAGGCGGATTTGGCGTTGGCGCTGTTACTCg < 2:155781/183‑1 (MQ=255) ttGGCTCCCGGATGCGTGCGCAAAACTGCGTCGGGCCGAATACCCGCCTGGAAGTGGTTACCGAAGGCGTGCTGACGCGCATGATCCAGCGTGACCCGGAACTGAGCGGTGTTGGACTGGTGATCCTTGATGAATTTCATGAGCGCAGCTTGCAGGCGGATTTGGCGTTGGCGCTGTTACTCg > 1:155781/1‑183 (MQ=255) | CGTTGCTGCCGTCTTACCTGAATTACTTACCGCTCTCGATTGTGCGCCGCAGGTATTATTAAGTGCGCCGACCGGGGCCGGGAAAT‑CAACCTGGCTGCCGCTGCAACTGCTGGCGCATCCCGGCATTAACGGGAAAATTATCCTGCTGGAGCCGCGTCGTCTGGCGGCGCGTAACGTCGCGCAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTACCGGATGCGTGCGCAAAACTGCGTCGGGCCGAATACCCGCCTGGAAGTGGTTACCGAAGGCGTGCTGACGCGCATGATCCAGCGTGACCCGGAACTGAGCGGTGTTGGACTGGTGATCCTTGATGAATTTCATGAGCGCAGCTTGCAGGCGGATTTGGCGTTGGCGCTGTTACTCGATGTGCAACAAGGTCTGCGTGATGACCTTAAACTGCTGATTATGTCGGCTAC > NC_000913/162119‑162577 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 6 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |