Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,920,539 T→G L106W (TTG→TGG)  rsmF → 16S rRNA m(5)C1407 methyltransferase, SAM‑dependent

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,920,5390TG100.0% 227.0 / NA 61L106W (TTG→TGG) rsmF16S rRNA m(5)C1407 methyltransferase, SAM‑dependent
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base G (32/29);  total (32/29)

CTGTCAGCGCCCGTTGCGCCGCAGCATTCGCGTTAATACGCTGAAAATCTCCGTTGCTGATTTCCTGCAATTAACCGCTCCTTATGGCTGGACGCTTACGCCAATTCCGTGGTGTGAAGAAGGTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCCGCCAGTCGGGTAAAAGTGTTACATGCCAATATCAGCCGCTGTGGTATCAGTAATGTTGCGCTCACACATTTTGATGGCCGCGTGTTTGGTGCGGC  >  NC_000913/1920318‑1920770
                                                                                                                                                                                                                             |                                                                                                                                                                                                                                       
cTGTCAGCGCCCGTTGCGCCGCAGCATTCGCGTTAATACGCTGAAAATCTCCGTTGCTGATTTCCTGCAATTAACCGCTCCTTATGGCTGGACGCTTACGCCAATTCCGTGGTGTGAAGAAGGTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTGGCCTGTTGCCGCCTTGt                                                                                                                                                                                                                        <  1:751892/239‑1 (MQ=255)
        gcCCGTTGCGCCGCAGCATTCGCGTTAATACGCTGAAAATCTCCGTTGCTGATTTCCTGCAATTAACCGCTCCTTATGGCTGGACGCTTACGCCAATTCCGTGGTGTGAAGAAGGTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTGGCCTGTTGCCGCCTTGTTTg                                                                                                                                                                                                                     <  2:61077/234‑1 (MQ=255)
         cccGTTGCGCCGCAGCATTCGCGTTAATACGCTGAAAATCTCCGTTGCTGATTTCCTGCAATTAACCGCTCCTTATGGCTGGACGCTTACGCCAATTCCGTGGTGTGAAGAAGGTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCAAGTTCACTGTGGCCTGTTGCCGCCTTGGTTGCTGACg                                                                                                                                                                                                               >  2:265173/1‑239 (MQ=255)
                   cgcAGCATTCGCGTTAATACGCTGAAAATCTCCGTTGCTGATTTCCTGCAATTAACCGCTCCTTATGGCTGGACGCTTACGCCAATTCCGTGGTGTGAAGAAGGTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTGGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGcacc                                                                                                                                                                                                     <  1:1000865/239‑1 (MQ=255)
                             gcgTTAATCCGCTGAAAATCTCCGTTGCTGATTTCCTGCAATTAACCGCTCCTTATGGCTGGACGCTTACGCCAATTCCGTGGTGTGAAGAAGGTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTGGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTg                                                                                                                                                                                           <  1:724781/239‑1 (MQ=255)
                                  aaTACGCTGAAAATCTCCGTTGCTGATTTCCTGCAATTAACCGCTCCTTATGGCTGGACGCTTACGCCAATTCCGTGGTGTGAAGAAGGTTTCTGGATTGAACGCGCCAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCCATGTGGCCTGTTGCCGCCTTGTTTTCTGACGGTAATGCACCACAGCGGGGgatgga                                                                                                                                                                                      >  1:583791/1‑239 (MQ=255)
                                                             ttCCTGCAATTAACCGCTCCTTATGGCTGGACGCTTACGCCAATTCCGTGGTGTGAAGAAGGTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTGGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCaaaa                                                                                                                                                            <  2:1044042/238‑1 (MQ=255)
                                                                                    tGGCTGGACGCTTACGCCAATTCCGTGGTGTGAAGAAGGTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTGGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAAAGACGCAAATTTCCGCGCGGACGa                                                                                                                                    >  1:602068/1‑239 (MQ=255)
                                                                                       cTGGACGCTTACGCCAATTCCGTGGTGTGAAGAAGGTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTGGCCTGTTGCCGCCTTGTTTGCt                                                                                                                                                                                                                   >  1:789132/1‑157 (MQ=255)
                                                                                       cTGGACGCTTACGCCAATTCCGTGGTGTGAAGAAGGTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTGGCCTGTTGCCGCCTTGTTTGCt                                                                                                                                                                                                                   <  2:789132/157‑1 (MQ=255)
                                                                                        tGGACGCTTACGCCAATTCCGTGGTGTGAAGAAGGTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTGGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCCAATTTCCGCGCGGATGAATaa                                                                                                                                >  2:661735/1‑239 (MQ=255)
                                                                                          gACGCTTACGCCAATTCCGTGGTGTGAAGAAGGTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTGGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCcg                                                                                                                                             <  1:792394/224‑1 (MQ=255)
                                                                                          gACGCTTACGCCAATTCCGTGGTGTGAAGAAGGTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTGGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCcg                                                                                                                                             >  2:792394/1‑224 (MQ=255)
                                                                                          gACGCTTACGCCAATTCCGTGGTGTGAAGAAGGTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTGGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACg                                                                                                                              >  1:389154/1‑239 (MQ=255)
                                                                                            cGCTTACGCCAATTCCGTGGTGTGAAGAAGGTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCTTTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTGGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGa                                                                                                                             <  1:438094/238‑1 (MQ=255)
                                                                                            cGCTTACGCCAATTCCGTGGTGTGAAGAAGGTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTGGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGa                                                                                                                             <  1:1003914/238‑1 (MQ=255)
                                                                                            cGCTTACGCCAATTCCGTGGTGGGAAGAAGGTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTGGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGa                                                                                                                             <  1:223732/238‑1 (MQ=255)
                                                                                               ttACGCCAATTCCGTGGTGTGAAGAAGGTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTGGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAacg                                                                                                                                                          >  2:1092551/1‑206 (MQ=255)
                                                                                               ttACGCCAATTCCGTGGTGTGAAGAAGGTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTGGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAacg                                                                                                                                                          <  1:1092551/206‑1 (MQ=255)
                                                                                                tACGCCAATTCCGTGGTGTGAAGAAGGTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTGGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGACggg                                                                                                                         >  1:835618/1‑238 (MQ=255)
                                                                                                                       aagGTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTGGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTcc                                                                                                 >  1:700458/1‑239 (MQ=255)
                                                                                                                          gTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTGGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCCGcc                                                                                              >  2:167195/1‑239 (MQ=255)
                                                                                                                          gTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTGGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAAGTTCCGCGCGGATGAATAACGCAGGGGCAATCCTTGCCAATGAGTTTTCCGcc                                                                                              >  2:876779/1‑239 (MQ=255)
                                                                                                                              cTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTGGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCCGCCAGTc                                                                                          <  2:716134/239‑1 (MQ=255)
                                                                                                                              cTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTGGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCCGCCAGTc                                                                                          >  2:934878/1‑239 (MQ=255)
                                                                                                                                        cgcgACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTGGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCCGCCAGTCGGGTAAAAgt                                                                                >  1:1133601/1‑239 (MQ=255)
                                                                                                                                           gACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTGGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCCGCCAGTCGGGTAAAAGTGtt                                                                             >  1:923510/1‑239 (MQ=255)
                                                                                                                                           gACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTGGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCCGCCAGTCGGGTAAAAGTGtt                                                                             >  1:552406/1‑239 (MQ=255)
                                                                                                                                             aaaTGAAGATGCATTGCCATGGGGTAGTACCGCCGAGCATTTAATTGGCCTGTTTTATATTAAGGAAGCCAGTTCAATGTGGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCCGCCAGTCGGGTAAAAGTGTTa                                                                            <  2:903944/237‑1 (MQ=255)
                                                                                                                                                     aTGCATTGCCATGGGGTTGTACCGCCGGGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTGGCCTGTTGCCGCCTTGTTTGCGGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCCGCCAGTCGGGTAAAAGTGTTa                                                                            <  2:1007175/230‑1 (MQ=255)
                                                                                                                                                      tGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTGGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCCGCCAGTCGGGTAAAAGTGTTACATGCCAata                                                                  >  1:851819/1‑239 (MQ=255)
                                                                                                                                                           tGCCTTTGGTTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTGGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCGGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCCGCCAGTCGGGTAAAAGTGTTACATGCCAATATCAGc                                                             <  2:89793/239‑1 (MQ=255)
                                                                                                                                                           tGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTGGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCCGCCAGTCGGGTAAAAGTGTTACATGCCAATATCAGc                                                             <  2:700458/239‑1 (MQ=255)
                                                                                                                                                            gCCATTGGGTAGTCCCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTGGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCCGCCAGTCGGGTAAAAGTGTTACATGCCAATATCAGcc                                                            <  1:934878/239‑1 (MQ=255)
                                                                                                                                                              ctttGGGTAGTGCCGCCGAGTATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTGGCCGGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCCGCCAGTCGGGTAAAAGTGTTACATGCCAATATCAGCCGc                                                          <  2:583791/237‑1 (MQ=255)
                                                                                                                                                               aTTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTGGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGAAGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCCGCCAGTCGGGTAAAAGTGTTACATGCCAata                                                                  >  1:1007175/1‑230 (MQ=255)
                                                                                                                                                                ttGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTGGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCCGCCAGTCGGGTAAAAGTGTTACATGCCAATATCAGCCGCtg                                                        <  1:167195/239‑1 (MQ=255)
                                                                                                                                                                  gggTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTGGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCt                                                                                                                                                                      <  2:920132/127‑1 (MQ=255)
                                                                                                                                                                  gggTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTGGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCt                                                                                                                                                                      >  1:920132/1‑127 (MQ=255)
                                                                                                                                                                     ttgtaCCGCCGAGCATTTAAGTGGCTGGTTTTATATTCAGTAAGGCGGTTGAATGGGGCCTGTTGCCGTCTTGTTTGCTGACGGTAATGACCCACAGCGGGTGTTGGATGGCGCTGCCGCGCCGGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAAAGAAGGGTCATTCCTTGCCAATGAGTTTTCCGCCAGTCGGGTAAAAGTGTTCCATGCCAATATCAGCCGCTGTGGt                                                    <  2:727984/236‑1 (MQ=255)
                                                                                                                                                                          ccgccgAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTGGCCTGTTGCCGCCTTGTTTGCTGACgg                                                                                                                                                                                                              <  1:818459/79‑1 (MQ=255)
                                                                                                                                                                          ccgccgAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTGGCCTGTTGCCGCCTTGTTTGCTGACgg                                                                                                                                                                                                              >  2:818459/1‑79 (MQ=255)
                                                                                                                                                                               gAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTGGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCCGCCAGTCGGGTAAAAGTGTTACATGCCAATATCAACCGCTGTGGTATCCGTAATGt                                         >  1:892836/1‑239 (MQ=255)
                                                                                                                                                                                       aaGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTGGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCcgcg                                                                                                                                           >  2:1103112/1‑133 (MQ=255)
                                                                                                                                                                                       aaGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTGGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCcgcg                                                                                                                                           <  1:1103112/133‑1 (MQ=255)
                                                                                                                                                                                            gCCTGTTTTATATTCAGGAAGCCAGTTCAATGTGGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAg                                                                                                                                                                                                 <  2:1083123/74‑1 (MQ=255)
                                                                                                                                                                                            gCCTGTTTTATATTCAGGAAGCCAGTTCAATGTGGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAg                                                                                                                                                                                                 >  1:1083123/1‑74 (MQ=255)
                                                                                                                                                                                            gCCTGTTTTATATTCAGGAAGCCAGTTCAATGTGGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCCGCCAGTCGGGTAAAAGTGTTACATGCCAATATCAGCCGCTGTGGTATCAGTAATGTTGCGCTCACACAt                            >  1:918767/1‑239 (MQ=255)
                                                                                                                                                                                            gCCTGTTTTATATTCAGGAAGCCAGTTCAATGTGGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCC‑AAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCCGCCAGTCGGGTAAAAGTGTTACATGCCAATATCAGCCGCTGTGGTATCAGTAATGTTGCGCTCACCCAtt                           >  2:206875/1‑239 (MQ=255)
                                                                                                                                                                                             ccTGTTTTATATTCAGGAAGCCAGTTCAATGTGGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCCGCCAGTCGGGTAAAAGTGTTACATGCCAATCTCAGCCGCTGTGGTATCAGTAATGTTGCCCTCACACAtt                           >  2:146254/1‑239 (MQ=255)
                                                                                                                                                                                                 ttttATATTCAGGAAGCCAGTTCAAtgtggcctgttgcc                                                                                                                                                                                                                               >  1:244066/1‑39 (MQ=255)
                                                                                                                                                                                                 ttttATATTCAGGAAGCCAGTTCAAtgtggcctgttgcc                                                                                                                                                                                                                               <  2:244066/39‑1 (MQ=255)
                                                                                                                                                                                                 ttttATATTCAGGAAGCCAGTTCAATGTGGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCgg                                                                                                                                                                                              >  1:622400/1‑72 (MQ=255)
                                                                                                                                                                                                 ttttATATTCAGGAAGCCAGTTCAATGTGGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCgg                                                                                                                                                                                              <  2:622400/72‑1 (MQ=255)
                                                                                                                                                                                                           aGGAAGCCAGTTCAATGTGGCCTGTTGCCGCCTTGTTTGCTGACGGTa                                                                                                                                                                                                            <  1:505110/48‑1 (MQ=255)
                                                                                                                                                                                                           aGGAAGCCAGTTCAATGTGGCCTGTTGCCGCCTTGTTTGCTGACGGTa                                                                                                                                                                                                            >  2:505110/1‑48 (MQ=255)
                                                                                                                                                                                                           aGGAAGCCAGTTCAATGTGGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCACTCCTTGCCAATGAGTTTTCCGCCAGTCGGGTAAAAGGGTTACATGCCAATATCAGCCGCTGTGGTATCAGTAATGTTGCGCTCCCACATTTTGATGGCcgcggg             >  1:767090/1‑237 (MQ=255)
                                                                                                                                                                                                           aGGAAGCCAGTTCAATGTGGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCCGCCAGTCGGGTaa                                                                                    >  1:926890/1‑168 (MQ=255)
                                                                                                                                                                                                           aGGAAGCCAGTTCAATGTGGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCCGCCAGTCGGGTaa                                                                                    <  2:926890/168‑1 (MQ=255)
                                                                                                                                                                                                           aGGAAGCCAGTTCAATGTGGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCCGCCAGTCGGGTAAAAGTGTTACATGCCAATATCAGCCGCTGTGGTATCAGTAATGTTGCGCTCACACATTTTGATGGCcg                 >  1:266168/1‑235 (MQ=255)
                                                                                                                                                                                                           aGGAAGCCAGTTCAATGTGGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCCGCCAGTCGGGTAAAAGGGTTACATGCCAATATCAGCCGCTGTGGTATCAGTAATGTTGCGCTCACACATTTTGATGGCcgcggg             >  2:741810/1‑237 (MQ=255)
                                                                                                                                                                                                                      tCAATGTGGCCTGTTGCCGCTTTGTGTGCTGCCGGTAATGCCCCCCAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCCGCCAGTCGGGTAAAAGTTTTACATGCCAATATCAGCCGCTGTGGTATCAGTAATGTTGCGCTCACACATTTTGATGGCCGCGTGTTTGGTGCgg   <  2:583250/238‑1 (MQ=255)
                                                                                                                                                                                                                      tCAATGTGGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCCGCCAGTCGGGTAAAAGTGTTACATGCCAATATCAGCCGCTGTGGTATCAGTAATGTTGCGCTCACACATTTTGATGGCCGCGTGTTTGGTGCGGc  <  2:923510/239‑1 (MQ=255)
                                                                                                                                                                                                                             |                                                                                                                                                                                                                                       
CTGTCAGCGCCCGTTGCGCCGCAGCATTCGCGTTAATACGCTGAAAATCTCCGTTGCTGATTTCCTGCAATTAACCGCTCCTTATGGCTGGACGCTTACGCCAATTCCGTGGTGTGAAGAAGGTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCCGCCAGTCGGGTAAAAGTGTTACATGCCAATATCAGCCGCTGTGGTATCAGTAATGTTGCGCTCACACATTTTGATGGCCGCGTGTTTGGTGCGGC  >  NC_000913/1920318‑1920770

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑