Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,004,1320GA31.9% 71.5 / 18.6 47A16V (GCT→GTT) rarDputative chloramphenical resistance permease
Reads supporting (aligned to +/- strand):  ref base G (3/29);  new base A (15/0);  total (18/29)
Fisher's exact test for biased strand distribution p-value = 1.09e-09
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

CCGCCCAGATAAACAGTAGCCAGTTGCCACCAATCAGCACGGCAGAGACTGCCAGCATAAAAATTTTCTGTGGCGTCTGAATCAGCGTTTTTAAATAGGACCACTGGCGGCAAATGCTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCATTTTTAATTGGTAACAGC‑AGTTTACCTGCTTTTATGTC‑TTCAACC‑TACCATA‑TAGGTGGCGGTGGCAC‑TGGCAATATAAAGCTGTTCTTCATTGTGTAATTCAACGCGGGCGACGGCGACTTTATTGCCTGCACGCAACAGGCTACTAGTAGCAGTAAAACGCT  >  NC_000913/4003899‑4004354
                                                                                                                                                                                                                                         |                                                                                                                                                                                                                                   
ccGCCCAGATAAACAGTAGCCAGTTGCCACCAATCAGCACGGCAGAGACTGCCAGCATAAAAATTTTCTGTGGCGTCTGAATCAGCGTTTTTAAATAGGACCACTGGCGGCAAATGCTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTTAAGAACACTGGCGCGATACCCCCAATAAAATAAACg                                                                                                                                                                                                                                   >  1:278643/1‑236 (MQ=255)
                tAGCCAGTTGCCACCAATCAGCACGGCAGAGACTGCCAGCATAAAAATTTTCTGTGGCGTCTGAATCAGCGTTTTTAAATAGGACCACTGGCGGCAAATGCTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGGACGTAGGAAAACAACATGAAGGAAGCTGGCGCTATAACCCCAAAAAAAAAAACGGCAAGAGAGAGCAAt                                                                                                                                                                                                                    >  1:506915/1‑235 (MQ=255)
                  gCCAGTTGCCACCAATCAGCACGGCAGAGACTGCCAGCATAAAAATTTTCTGTGGCGTCTGAATCAGCGTTTTTAAATAGGACCACTGGCGGCAAATGCTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGGCAGGAGGAAATCAAATTTCAGAACAGCGGCGCTATATCCCCAATAAAAAAAAAAGAAATAGCGAGtactac                                                                                                                                                                                                                  >  2:648695/1‑235 (MQ=255)
                  gCCAGTTGCCACCAATCAGCACGGCAGAGACTGCCAGCATAAAAATTTTCTGTGGCGTCTGAATCAGCGTTTTTAAATAGGACCACTGGCGGCAAATGCTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGAAAGGAGTAAATCAAATTGAAGTAAAGTGGGGCCATATACCACATAAAATAAACAGGAAGAGCGAGTaaaat                                                                                                                                                                                                                  >  2:218794/1‑232 (MQ=255)
                    cAGTTGCCACCAATCAGCACGGCAGAGACTGCCAGCATAAAAATTTTCTGTGGCGTCTGAATCAGCGTTTTTAAATAGGACCACTGGCGGCAAATGCTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAAt                                                                                                                                                                                                                    <  1:369630/231‑1 (MQ=255)
                              caattggCACGACAGAGACTGCCAGCATAAAAATTTTCTGTGGCGTCTGAATCAGCGTTTTTAAATAGGACCACTGGCGGCAAATGCTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCgt                                                                                                                                                                                                      <  2:28054/229‑1 (MQ=255)
                                     cACGGCAGAGACTGCCAGCATAAAAATTTTCTGTGGCGTCTGAATCAGCGTTTTTAAATAGGACCACTGGCGGCAAATGCTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCAAGCAGGAAAAAAACTTTAAAGAAGCAGGCGCTCTATCCCACATAAAATAAGACGCAAGAGCGAGTTATAAGGCCTccccgcgctggttt                                                                                                                                                                                               >  2:89402/1‑224 (MQ=255)
                                       cGGCAGAGACTGCCAGCATAAAAATTTTCTGTGGCGTCTGAATCAGCGTTTTTAAATAGGACCACTGGCGGCAAATGCTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGca                                                                                                                                                                                            <  1:599738/236‑1 (MQ=255)
                                         gcaaataCTGCCAGCATAAAAATTTTCTGGCGCGTCTAAATCAGCGTTTTTAAATAGGACCACTGGCGGCAAATGCTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGcat                                                                                                                                                                                           <  2:550957/229‑1 (MQ=255)
                                         gCAGAGACTGCCAGCATAAAAATTTTCTGTGGCGTCTGAATCAGCGTTTTTAAATAGGACCACTGGCGGCAAATGCTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGcatc                                                                                                                                                                                          <  1:691503/236‑1 (MQ=255)
                                          cAGAGACTGCCAGCATAAAAATTTTCTGTGGCGTCTGAATCAGCGTTTTTAAATAGGACCACTGGCGGCAAATGCTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAACTGCAAGAGGGAGTAATAAGACCTGCCCCGGTTGTTTTTgatcc                                                                                                                                                                                         >  1:406000/1‑236 (MQ=255)
                                                 tGCCAGCATAAAAATTTTCTGTGGCGTCTGAATCAGCGTTTTTAAATAGGACCACTGGCGGCAAATGCTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGcatccat                                                                                                                                                                                       <  1:409853/231‑1 (MQ=255)
                                                   ccAGCATAAAAATTTTCTGTGGCGTCTGAATCAGCGTTTTTAAATAGGACCACTGGCGGCAAATGCTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGGACGTAGGAAAACAAATTGAAGAAAGCTGGGGCTATACCCCAAATAGAAAAAAAAGCAAAAGAGGGGAAAAAAGCCCGGCGCGTTTGTTTTTGGTCCATCcggtaa                                                                                                                                                                                >  2:492779/1‑233 (MQ=255)
                                                       cATAAAAATTTTCTGTGGCGTCTGAATCAGCGTTTTTAAATAGGACCACTGGCGGCAAATGCTCATCAGCCCCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACTCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGATCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGa                                                                                                                                                                                  <  1:177897/230‑1 (MQ=255)
                                                               ttttCTGTGGCGTCTGAATCAGCGTTTTTAAATAGGACCACTGGCGGCAAATGCTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCATTTTTaa                                                                                                                                                                    <  1:218674/236‑1 (MQ=255)
                                                               gtttCGGTGGCGTCTGAATCAACATTTTTAAAGAGGCCCACTGGCGGCAAATGCTAATCAGCCCCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCATTTTTaa                                                                                                                                                                    <  2:406000/235‑1 (MQ=255)
                                                                           tCTGAATCAGCGTTTTTAAATAGGACCACTGGCGGCAAATGCTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGCAGTAAATCAACTTGAAGTACGCTGGCGCTTTAACCCAAATAAAATAAACGGCCAAAGCGAGTAATAAACCCCGCCCCGCTTGTTTTTCATCCATCGGGGAAACTCAATTTTTATTGGTTacaac‑a                                                                                                                                                       >  2:618138/1‑236 (MQ=255)
                                                                              gAATCAGCGTTTTTAAATAGGACCACTGGCGGCAAATGCTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGcatccat                                                                                                                                                                                       <  1:624368/202‑1 (MQ=255)
                                                                              gAATCAGCGTTTTTAAATAGGACCACTGGCGGCAAATGCTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGca                                                                                                                                                                                            <  1:69667/197‑1 (MQ=255)
                                                                                 tCAGCGTTTTTAAATAGGACCACTGGCGGCAAATGCTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCATTTTTAATTTGTAACAGC‑AGTTTAc                                                                                                                                                 <  1:618138/236‑1 (MQ=255)
                                                                                     cGTTTTTAAATAGGACCACTGGCGGCAAATGCTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGGAAATCAACCTGTAGAAAGCTGGCGCTCTACCCCACATAAAAAAAAAGGCAAGAGAGAGTAATAAGCCCTGCCGCGCTTGTTTTGCATTCATCTGGagt                                                                                                                                                                                >  2:624368/1‑200 (MQ=255)
                                                                                     cGTTTTTAAATAGGACCACTGGCGGCAAATGCTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGCAGTAAAACAACCTGAAAGACGCCGGCGGCATTACCCCAATAAAAAAAACCGCAAAAGCGAGGAATACTCCCCTCCGCGGTTGTTTTGCATTCATCCGGAGTAATCCTTTTTAATTCGTTACAGA‑AGgtttc                                                                                                                                                 >  2:343465/1‑230 (MQ=255)
                                                                                                      ccTGGCGGCAAATGCTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCATTTTTAATTGGTAACAGC‑AGTTTACCTGCTTTTATGTC‑TTCAAc                                                                                                                             <  1:596797/233‑1 (MQ=255)
                                                                                                      aCTGGCGGCAAATGCTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCATTTTTAATTGGTAACAGC‑AGTTTACCTGCTTTTATGTC‑TTCAAc                                                                                                                             <  1:343465/234‑1 (MQ=255)
                                                                                                      aCTGGCGGCAAATGCTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCATTTTTAATTGGTAACAGC‑AGTTTACCTGCTTTTATGTC‑TTCAAc                                                                                                                             <  1:753108/234‑1 (MQ=255)
                                                                                                                     tcatcaGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCg                                                                                                                                                                                                                          <  1:228145/128‑1 (MQ=255)
                                                                                                                        tcaGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGCAGTAAATCAACTTTAAGTAAGCTGGGGCTCTAACCCCAATAAAAAAAACGGCAAAAGCGAGTAAAACGCCCTGCCGCGCTTTTTTTTTATCCATCGGGGAAAATCCTTTTTAATTGGGACAACC‑AGATTTTACGCTTTTTTGTT‑TTTTACC‑TACCATA‑TAgatggtggg                                                                                                        >  2:523243/1‑234 (MQ=255)
                                                                                                                         caGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCATTTTTAATTGGTAACAGC‑AGTTTACCTGCTTTTATGTC‑TTCAACC‑TACCATA‑TAggtggcggtgg                                                                                                      <  1:492779/236‑1 (MQ=255)
                                                                                                                            caccacCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGGAGTAAATCAAATTTAAGTAAGCTGGGGCTATAACCCAAATAAAATAAAAGGCAAAAGGGAGGaaaa                                                                                                                                                                                                                   >  2:228145/1‑126 (MQ=255)
                                                                                                                            caccacCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGGAGTAAAACAACTTGAAGGACGCTGGCGCCATACCCCAAATAAAATAAACGGCAAAAACGAGAAATAAACCCCGCCCCGTTTTTTTTGTATTCACCGGGGATAACCCATTTTAATTGGGAACAGC‑AGGTTTACTGCCTTTTTTTC‑TTTTACCTTACCTTA‑TAggtgtcgttgcg                                                                                                     >  2:246013/1‑233 (MQ=255)
                                                                                                                                 ccaTAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCCCCGAGTAAAACAACCTGAAGTAAGCCGGCGCTATAACCCAAATAAAAAAAACGGCAAGAGCGAGGAATAAGCCCCGGCGCGTTTGTTTTTCATTCAACAGGGATAATCATTTTTAATTTGTGAAAGCAAGTTTA‑CTGCTTTTTTGTCTTTCAACT‑TA‑CATATTAAGGAGCGGTGGCAC‑TTGc                                                                                              >  2:746252/1‑236 (MQ=255)
                                                                                                                                   aTAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCATTTTTAATTGGTAACAGC‑AGTTTACCTGCTTTTATGTC‑TTCAACC‑TACCATA‑TAGGTGGCGGTGGCAC‑Tgg                                                                                               <  1:89402/232‑1 (MQ=255)
                                                                                                                                    tAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCATTTTTAATTGGTAACAGC‑AGTTTACCTGCTTTTATGTC‑TTCAACC‑TACCATA‑TAGGTGGCGGTGGCAC‑TGGCAata                                                                                          <  1:746252/236‑1 (MQ=255)
                                                                                                                                    tAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGCATTAAAAAAACTTTAAGTACGCTGGCGCTATAACCCAAATAAAAAAAACGGCCAAAGGGAGGAAAAAGCCCCGCCGCGCTTGTTTTGTATCCAACGGGCAAAATCATTTTTTATTTGTAAAAAC‑AGTTTACCTCCTTTTTTGTG‑TTTAACC‑CACCCTA‑TAACAGGCGGTGGTAC‑TGGCatag                                                                                          >  2:711668/1‑233 (MQ=255)
                                                                                                                                           aaaCGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCAACTAGTAAAACAACTTGAAGGAAGCCGGCGCTATACCCCAAAAAAAATAAAAGGCAAGAGGGGGGAAAAAACCCTGCCGCGGTTGTTTTTCATCCCTCCGGGAAACTCACTTTTTATTTGTAAAAAG‑CGTTTTTCTGCCTTTTTGTT‑TTCAACC‑TTCCCTA‑TAAGTGGCCGTGGGTCTTGGCATTATaacat                                                                                    >  2:129812/1‑233 (MQ=255)
                                                                                                                                                  cAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGT‑ATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCATTTTTAATTGGTAACAGC‑AGTTTACCTGCTTTTATGTC‑TTCAACC‑TACCATA‑TAGGTGGCGGTGGCAC‑TGGCAATATAAAGCTGTTCTTCa                                                                           <  1:414097/236‑1 (MQ=255)
                                                                                                                                                   aGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCATTTTTAATTGGTAACAGC‑AGTTTACCTGCTTTTATGTC‑TTCAACC‑TACCATA‑TAGGTGGCGGTGGCAC‑TGGCAATATAAAGCTGTTCTTCa                                                                           <  1:218794/236‑1 (MQ=255)
                                                                                                                                                   aGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCATTTTTAATTGGTAACAGC‑AGTTTACCTGCTTTTATGTC‑TTCAACC‑TACCATA‑TAGGTGGCGGTGGCAC‑TGGCAATATAAAGCTGTTCTTCa                                                                           <  1:129812/236‑1 (MQ=255)
                                                                                                                                                        aCGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGca                                                                                                                                                                                            <  1:686582/123‑1 (MQ=255)
                                                                                                                                                                              cggcggACAAGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCATTTTTAATTGGTAACAGC‑AGTTTACCTGCTTTTATGTC‑TTCAACC‑TACCATA‑TAGGTGGCGGTGGCAC‑TGGCAATATAAAGCTGTTCTTCATTGTGTAATTCAACGCGggcgacggcg                                                <  2:278643/236‑1 (MQ=255)
                                                                                                                                                                                             aaaTCAACTTGAAGTTCGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCATTTTTAATTGGTAACAGC‑AGTTTACCTGCTTTTATGTC‑TTCAACC‑TACCATA‑TAGGTGGCGGTGGCAC‑TGGCAATATAAAGCTGTTCTTCATTGTGTAATTCAACGCGGGCGACGGCGACTTTATTGCCTGCa                                 <  1:495818/236‑1 (MQ=255)
                                                                                                                                                                                                   aCTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCTAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCATTTTTAATTGGTAACAGC‑AGTTTACCTGCTTTTATGTC‑TTCAACC‑TACCATA‑TAGGTGGCGGTGGCAC‑TGGCAATATAAAGCTGTTCTTCATTGTGTAATTCAACGCGGGCGACGGCGACTTTATTGCCTGCACGCAAc                           <  2:506915/236‑1 (MQ=255)
                                                                                                                                                                                                    cTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCATTTTTAATTGGTAACAGC‑AGTTTACCTGCTTTTATGTC‑TTCAACC‑TACCATA‑TAGGTGGCGGTGGCAC‑TGGCAATATAAAGCTGttctt                                                                             <  2:186907/185‑1 (MQ=255)
                                                                                                                                                                                                    cTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCATTTTTAATTGGTAACAGC‑AGTTTACCTGCTTTTATGTC‑TTCAACC‑TACCATA‑TAGGTGGCGGTGGCAC‑TGGCAATATAAAGCTGttctt                                                                             >  1:186907/1‑185 (MQ=255)
                                                                                                                                                                                                             cGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCATTTTTAATTGGTAACAGC‑AGTTTACCTGCTTTTATGTC‑TTCAACC‑TACCATA‑TAGGTGGCGGTGGCAC‑TGGCAATATAAAGCTGTTCTTCATTGTGTAATTCAACGCGGGCGACGGCGACTTTATTGCCTGCACGCAACAGGctacta                  >  1:189164/1‑235 (MQ=255)
                                                                                                                                                                                                                           cccAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCATTTTTAATTGGTAACAGC‑AGTTTACCTGCTTTTATGTC‑TTCAACC‑TACCATA‑TAGGTGGCGGTGGCAC‑TGGCAATATAAAGCTGTTCTTCATTGTGTAATTCAACGCGGGCGACGGCGACTTTATTGCCTGCACGCAACAGGCTACTAGTAGCAGTAAAACGc   <  1:114852/236‑1 (MQ=255)
                                                                                                                                                                                                                            ccAAATAAAATAAGCGGCAAGAGCTAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCATTTTTAATTGGTAACAGC‑AGTTTACCTGCTTTTATGTC‑TTCAACC‑TACCATA‑TAGGTGGCGGTGGCAC‑TGGCAATATAAAGCTGTTCTTCATTGTGTAATTCAACGCGGGCGACGGCGACTTTATTGCCTGCACGCAACAGGCTACTAGTAGCAGTAAAACGCt  <  1:711668/236‑1 (MQ=255)
                                                                                                                                                                                                                                         |                                                                                                                                                                                                                                   
CCGCCCAGATAAACAGTAGCCAGTTGCCACCAATCAGCACGGCAGAGACTGCCAGCATAAAAATTTTCTGTGGCGTCTGAATCAGCGTTTTTAAATAGGACCACTGGCGGCAAATGCTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCATTTTTAATTGGTAACAGC‑AGTTTACCTGCTTTTATGTC‑TTCAACC‑TACCATA‑TAGGTGGCGGTGGCAC‑TGGCAATATAAAGCTGTTCTTCATTGTGTAATTCAACGCGGGCGACGGCGACTTTATTGCCTGCACGCAACAGGCTACTAGTAGCAGTAAAACGCT  >  NC_000913/4003899‑4004354

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑