Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,101,5140GT25.5% 79.4 / 16.3 47intergenic (+84/‑176)sodA/kdgTsuperoxide dismutase, Mn/2‑keto‑3‑deoxy‑D‑gluconate transporter
Reads supporting (aligned to +/- strand):  ref base G (5/30);  new base T (12/0);  total (17/30)
Fisher's exact test for biased strand distribution p-value = 1.18e-07
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

GCGCTTCCGGCTTCCCGATTATGGGCCTGGATGTGTGGGAACATGCTTACTACCTGAAATTCCAGAACCGCCGTCCGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAATGTCTATCTTCGTTTCCATCAACACTGATGCTCCATTGAGGAATTACGCATCAGCCCTTAAAAATATGCCGACAGGTGATGGAAATGCAGATAAAACGCTCGATTGAGAAAATCCCGGGGGGGATGATGCTCGTCCCGCTATT  >  NC_000913/4101282‑4101748
                                                                                                                                                                                                                                        |                                                                                                                                                                                                                                             
gcgcTTCCGGCTTCCCGATTATGGGCCTGGATGTGTGGGAACATGCTTACTACCTGAAATTCCAGAACCGCCGTCCGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGCCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGCGGGGTTTTtgtgt                                                                                                                                                                                                                                           >  2:633283/1‑235 (MQ=255)
                gATTATGGGCCTGGATGTGTGGGAACATGCTTACTACCTGAAATTCCAGAACCGCCGTCCGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATCAATTTCAAAATaaa                                                                                                                                                                                                                          <  1:192654/236‑1 (MQ=255)
                         ccTGGATGTGTGGGAACATGCTTACTACCTGAAATTCCAGAACCGCCGTCCGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATCAATTTCAAAATAAAAACAATGAt                                                                                                                                                                                                                 <  1:238954/236‑1 (MQ=255)
                           tGGATGTGTGGGAACATGCTTACTACCTGAAATTCCAGAACCGCCGTCCGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGGGTTTTTTTGGTCAATTTTTAAATAAAAACaaaaaacc                                                                                                                                                                                                               >  2:332875/1‑230 (MQ=255)
                             gATGTGTGGGAACATGCTTACTACCTGAAATTCCAGAACCGCCGTCCGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGAGGGGTTTTTTTGATCAATTTTTAAATaaaaaaaaacaacccg                                                                                                                                                                                                             >  2:238954/1‑228 (MQ=255)
                              atggggggtaaCATGGTTACTTCCTGAAATTCCAGAACCGCAGTCCGGACTTCATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTGTAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGat                                                                                                                                                                                                            <  1:238436/227‑1 (MQ=255)
                              aTGTGTGGTAACATGCTTACTACCTGAAATTCCAGAACCTGCGTCCGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGat                                                                                                                                                                                                            <  2:96569/236‑1 (MQ=255)
                              aTGTGTGGGAACATGCTTACTACCTGAAATTCCAGAACCGCCGTCCGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGat                                                                                                                                                                                                            <  1:303420/236‑1 (MQ=255)
                              aTGTGTGGGAACATGCTTACTACCTGAAATTCCAGAACCGCCGTCCGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGat                                                                                                                                                                                                            <  1:754306/236‑1 (MQ=255)
                                       aaCATGCTTACTGCCTGAAATTCCAGAACCGCCGTCCGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGGTTTTTTTTGATCAAATTTAAAAAATAAACAAAGATCACataaaaataaa                                                                                                                                                                                                   >  2:401326/1‑236 (MQ=255)
                                         cATGCTTACTACCTGAAATTCCAGAACCGCCGTCCGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGGTTTTTTTTGTTCAAATTCTAAATAAAAACAAAGAACCCagaaaaataaaaa                                                                                                                                                                                                 >  2:703803/1‑235 (MQ=255)
                                                actacCTGAAATTCCAGAACCGCCGTCCGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGGGATTAATTTTAAAATAAAAACAATAATCCCgttaaaataaaaacaccgtt                                                                                                                                                                                          >  1:383508/1‑228 (MQ=255)
                                                actacCTGAAATTCCAGAACCGCCGTCCGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGGTTTTTTGGGATCAATTTCAAAATAAAAACAAAGATCCGataaaaataaaaaaacggtt                                                                                                                                                                                          >  1:82896/1‑228 (MQ=255)
                                                         aaTTCCAGAACCGCCGTCCGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGAtg                                                                                                                                                                                 <  1:401326/236‑1 (MQ=255)
                                                                gagccgcgatCCTGACTACATTAAAGAGTTCTGGAACGTGGGTAACTGGGACGAAGCCGGGGCCAGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGtt                                                                                                                                                                            <  2:441607/225‑1 (MQ=255)
                                                                    cgccgTCCGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGataa                                                                                                                                                                                                          <  1:711650/200‑1 (MQ=255)
                                                                     gccgTCCGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGAt                                                                                                                                                                       <  2:567548/234‑1 (MQ=255)
                                                                     gccgTCCGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGAt                                                                                                                                                                       <  2:272185/234‑1 (MQ=255)
                                                                                       aaGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAaatga                                                                                                                                                   <  2:593602/236‑1 (MQ=255)
                                                                                            ttCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGGTTTTTTTTGATCCATTTTAAAATAAAAACAAATATCCGATAAAAATAAAAAAGCGTTTCAATTGATTTGGTTTTGATCACTTTTACTGATTaa                                                                                                                                                       >  1:194424/1‑227 (MQ=255)
                                                                                            ttCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGGTTTTTTGTGATCAATTTTAAAATAAAAAAAATGATACGATAAAAATAAAACAGCGGTTCAATTGATAGGGTTTTTATCACTTTTATTGATTaaataaatagt                                                                                                                                              >  1:49650/1‑233 (MQ=255)
                                                                                            ttCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGGGGGTTTTTTTTGATTAAATTTAAAAAAAAAAAAACAATACGATAAAAATAAAAAAGAGATTCAATTGATGTGGGTTTGTTTACATTTATTGTTTATATAAAAGtg                                                                                                                                             >  2:328837/1‑235 (MQ=255)
                                                                                                      tggtgAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAATGTCTATCTTCGtt                                                                                                                                   <  1:413706/236‑1 (MQ=255)
                                                                                                         tgAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATCAATTTCAAAATAAAAACAATGAt                                                                                                                                                                                                                 <  1:563742/156‑1 (MQ=255)
                                                                                                         tgAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATCAATTTCAAAATAAAAACAATGAt                                                                                                                                                                                                                 <  1:683112/156‑1 (MQ=255)
                                                                                                          gAACTGGGACGAAGCAGCGGCACGTTTTGCAGCGAAAAAATAATCATTTGCCGACTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAATGTCTATCTTCGTTTcc                                                                                                                                <  1:240121/235‑1 (MQ=255)
                                                                                                                ggACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTTTGATCAATTTTAAAATAAAAAAAATGATCCGataa                                                                                                                                                                                                          >  2:683112/1‑156 (MQ=255)
                                                                                                                ggACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGGTTTTTTTTGATCAATTTCTAAATAAAAACAATGATCCCataa                                                                                                                                                                                                          >  2:563742/1‑156 (MQ=255)
                                                                                                                     aaGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGGTTTTTTTTGATCCATTTTATAATAAAAACAAAGAACCCATAAAAAAAAAAAAGCGGTTTAATTGATTTGGTTTTTATAACTCTTTTTGATTAAATTAATGGTCAATTTCTCTTCCATCAaca                                                                                                                         >  2:666909/1‑231 (MQ=255)
                                                                                                                                       agtcgAAAAAATAATCATTTGCCTCCTTACTCAATGAGGCGTATAGGTCGGATAACAGCTCAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAATGTCTATCTTCGTTTCCATCAACACTGATGCTCCATTGAGGAATTa                                                                                                   <  2:598927/232‑1 (MQ=255)
                                                                                                                                            aaaaaaTACTCATTTGCCGCCTGCTGCAATGAAGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAATGTCTATCTTCGTTTCCATCAACACTGATGCTCCATTGAGGAATTACGCAt                                                                                              <  2:58127/235‑1 (MQ=255)
                                                                                                                                            aaaaaaTAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGGTTTTTTTTGTTTAATTTCAAAATAAAAAAAATGATCCGATAAAAATAAAACAGCGTTTCCATTGATGTGGGGTTGATAACCTTTTTTGATTAAATGAATGTTTATTTTTGGTTCCCTCTAAACTGATTCTCAATTGAGGAATTAAGCAt                                                                                              >  2:312618/1‑235 (MQ=255)
                                                                                                                                              aaaaTAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAATGTCTATCTTCGTTTCCATCAACACTGATGCTCCATTGAGGAATTACGCATCAg                                                                                           <  1:332875/236‑1 (MQ=255)
                                                                                                                                               aatgtatCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAATGTCTATCTTCGTTTCCATCAACACTGATGCTCCATTGAGGAATTACGCATCAg                                                                                           <  2:155809/230‑1 (MQ=255)
                                                                                                                                                             cgccTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAATGTCTATCTTCGTTTCCATCAACACTGATGCTCCATTGAGGAATTACGCATCAGCCCTTAAAAATATGc                                                                            <  1:633283/236‑1 (MQ=255)
                                                                                                                                                                ctgctgCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAATGTCTATCTTCGTTTCCATCAACACTGATGCTCCATTGAGGAATTACGCATCAGCCCTTAAAAATATGCCGa                                                                         <  1:328837/236‑1 (MQ=255)
                                                                                                                                                                atgctgcAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAATGTCTATCTTCGTTTCCATCAACACTGATGCTCCATTGAGGAATTACGCATCAGCCCTTAAAAATATGCCGa                                                                         <  2:512148/235‑1 (MQ=255)
                                                                                                                                                                 tgctgcAATGAAGCGTATGGGCAGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAATGTCTATCTTCGTTTCCATCAACACTGATGCTCCATTGAGGAATTACGCATCAGCCCTTAAAAATATGCCGAc                                                                        <  2:82896/236‑1 (MQ=255)
                                                                                                                                                                             gCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGGGGGTTTTTTGTGGTTCAATTTAAAAAAAAAACAAAGATCCGATAAAAAAAAAAAAGCGTTTTCATTTATGTGGGTTTTATCACTTTTTTTGATTAAATGAATGTCCATCTTCTTTTTCGTTAAACCTGATGTCCCACTTAGGAATTACTCATCAGCCCCTTAAAATAAGCCGACACGCGCTGGaga                                                            >  2:358020/1‑234 (MQ=255)
                                                                                                                                                                                tataGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGGGGGTTTTTTTTGATCAATTTTAAAATAAAAAAAAAAATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGGTTTTATTACTTTTATTTATTAAATGAATGTCTATATTTGTTTTCATCTACACTCATGCTCCCTCTAGTGATTACGCATCAACCCTCTAAAAAATGCCGACAGATGCTGGAAAtct                                                         >  2:158586/1‑234 (MQ=255)
                                                                                                                                                                                        gCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAAt                                                                                                                                                                                      <  1:168039/104‑1 (MQ=255)
                                                                                                                                                                                             tCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAATGTCTATCTTCGtt                                                                                                                                   <  1:520445/149‑1 (MQ=255)
                                                                                                                                                                                             tCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAATGTCTATCTTCGTTTCCATCAACACTGATGCTCCATTGAGGAATTACGCATCAGCCCTTAAAAATATGCCGACAGGTGATGGAAATGCAGATAAAACGCt                                             <  1:666909/235‑1 (MQ=255)
                                                                                                                                                                                                gtttAAAAAATGAACCATCGCCAACGGCGGTTGTTTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAATGTCTATCTTCGTTTCCATCAACACTGATGCTCCATTGAGGAATTACGCATCAGCCCTTAAAAATATGCCGACAGGTGATGGAAATGCAGATAAAACGCTCGAt                                         <  1:538385/234‑1 (MQ=255)
                                                                                                                                                                                                    aaaaaaTGAACCATCGCCAACGGCGGTGGGTTTTTTTTGTTTCAATTTAAAATAAAAAAAAAGATCCGGTAAAAATAAAAAAACGGTTTAATTTATTTGGGTTTTTTTACTTTTTTTTTTTTAAAGAATGTTTTTTTTTGtttttaacc                                                                                                                            >  2:520445/1‑143 (MQ=255)
                                                                                                                                                                                                                    tcAACGGCAGTAGTTTTTTTGTGATCAATTACAAAATAAAAACAATGATACGATAAAAATAAATCAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGGATGTCGATCATCGTTTCCAACACCACAGATGCTCCATTGAGGAATTACGCATCAGCCCTTAAAAATATGCCGGCGGGTGATGGAAATGGGGATAAAACGATCGATTGAGAAAATCCCgggagaga                     <  2:49939/235‑6 (MQ=255)
                                                                                                                                                                                                                                  ttttttGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAATGTCTATCTTCGTTTCCATCAACACTGATGCTCCATTGAGGAATTACGCATCAGCCCTTAAAAATATGCCGACAGGTGATAGAAATGCAGATAAAACGCTCGATTGAGAAAATCCCGGGGGGGATGATGCTCGTCCCg       <  1:291293/236‑1 (MQ=255)
                                                                                                                                                                                                                                     tttGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAATGTCTATCTTCGTTTCCATCAACACTGATGCTCCATTGAGGAATTACGCATCAGCCCTTAAAAATATGCCGACAGGTGATGGAAATGCAGATTAAAACCTCGATTGAGAAAATTCCGGGGGGGATGATGTACGTTCCGc      >  2:258863/1‑234 (MQ=255)
                                                                                                                                                                                                                                       tgtgATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAATGTCTATCTTCGTTTCCATCAACACTGATGCTCCATTGAGGAATTACGCATCAGCCCTTAAAAATATGCCGACAGGTGATGGAAATGCAGATAAAACGCTCGATTGAGAAAATCCCGGGGGGGATGATGCTCGTCCCGCTAtt  <  1:358020/236‑1 (MQ=255)
                                                                                                                                                                                                                                        |                                                                                                                                                                                                                                             
GCGCTTCCGGCTTCCCGATTATGGGCCTGGATGTGTGGGAACATGCTTACTACCTGAAATTCCAGAACCGCCGTCCGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAATGTCTATCTTCGTTTCCATCAACACTGATGCTCCATTGAGGAATTACGCATCAGCCCTTAAAAATATGCCGACAGGTGATGGAAATGCAGATAAAACGCTCGATTGAGAAAATCCCGGGGGGGATGATGCTCGTCCCGCTATT  >  NC_000913/4101282‑4101748

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: