Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 4,101,514 | 0 | G | T | 25.5% | 79.4 / 16.3 | 47 | intergenic (+84/‑176) | sodA/kdgT | superoxide dismutase, Mn/2‑keto‑3‑deoxy‑D‑gluconate transporter |
Reads supporting (aligned to +/- strand): ref base G (5/30); new base T (12/0); total (17/30) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.18e-07 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Rejected as consensus: Frequency below/above cutoff threshold. |
GCGCTTCCGGCTTCCCGATTATGGGCCTGGATGTGTGGGAACATGCTTACTACCTGAAATTCCAGAACCGCCGTCCGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGT‑G‑ATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAAT‑GTCTATCTTCGTTTCCATCAACACTGATGCTCCATTGAGGAATTACGCATCAGCCCTTAAAAATATGCCGACAGGTGATGGAAATGCAGATAAAACGCTCGATTGAGAAAATCCCGGGGGGGATGATGCTCGTCCCGCTATT > NC_000913/4101282‑4101748 | gcgcTTCCGGCTTCCCGATTATGGGCCTGGATGTGTGGGAACATGCTTACTACCTGAAATTCCAGAACCGCCGTCCGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGCCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGCGGGGTTTTtgt‑gt > 2:633283/1‑235 (MQ=255) gATTATGGGCCTGGATGTGTGGGAACATGCTTACTACCTGAAATTCCAGAACCGCCGTCCGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGT‑G‑ATCAATTTCAAAATaaa < 1:192654/236‑1 (MQ=255) ccTGGATGTGTGGGAACATGCTTACTACCTGAAATTCCAGAACCGCCGTCCGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGT‑G‑ATCAATTTCAAAATAAAAACAATGAt < 1:238954/236‑1 (MQ=255) tGGATGTGTGGGAACATGCTTACTACCTGAAATTCCAGAACCGCCGTCCGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGGGTTTTTTT‑G‑GTCAATTTTTAAATAAAAACaaaaaacc > 2:332875/1‑230 (MQ=255) gATGTGTGGGAACATGCTTACTACCTGAAATTCCAGAACCGCCGTCCGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGAGGGGTTTTTTT‑G‑ATCAATTTTTAAATaaaaaaaaacaacccg > 2:238954/1‑228 (MQ=255) atggggggtaaCATGGTTACTTCCTGAAATTCCAGAACCGCAGTCCGGACTTCATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTGTAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGT‑G‑ATCAATTTCAAAATAAAAACAATGATCCGat < 1:238436/227‑1 (MQ=255) aTGTGTGGTAACATGCTTACTACCTGAAATTCCAGAACCTGCGTCCGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGT‑G‑ATCAATTTCAAAATAAAAACAATGATCCGat < 2:96569/236‑1 (MQ=255) aTGTGTGGGAACATGCTTACTACCTGAAATTCCAGAACCGCCGTCCGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGT‑G‑ATCAATTTCAAAATAAAAACAATGATCCGat < 1:303420/236‑1 (MQ=255) aTGTGTGGGAACATGCTTACTACCTGAAATTCCAGAACCGCCGTCCGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGT‑G‑ATCAATTTCAAAATAAAAACAATGATCCGat < 1:754306/236‑1 (MQ=255) aaCATGCTTACTGCCTGAAATTCCAGAACCGCCGTCCGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGGTTTTTTTT‑G‑ATCAAATTTAAAAAATAAACAAAGATCACataaaaataaa > 2:401326/1‑236 (MQ=255) cATGCTTACTACCTGAAATTCCAGAACCGCCGTCCGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGGTTTTTTTT‑G‑TTCAAATTCTAAATAAAAACAAAGAACCCagaaaaataaaaa > 2:703803/1‑235 (MQ=255) actacCTGAAATTCCAGAACCGCCGTCCGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGG‑G‑ATTAATTTTAAAATAAAAACAATAATCCCgttaaaataaaaacaccgtt > 1:383508/1‑228 (MQ=255) actacCTGAAATTCCAGAACCGCCGTCCGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGGTTTTTTGG‑G‑ATCAATTTCAAAATAAAAACAAAGATCCGataaaaataaaaaaacggtt > 1:82896/1‑228 (MQ=255) aaTTCCAGAACCGCCGTCCGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGT‑G‑ATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGAtg < 1:401326/236‑1 (MQ=255) gagccgcgatCCTGACTACATTAAAGAGTTCTGGAACGTGGGTAACTGGGACGAAGCCGGGGCCAGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGT‑G‑ATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGtt < 2:441607/225‑1 (MQ=255) cgccgTCCGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGT‑G‑ATCAATTTCAAAATAAAAACAATGATCCGataa < 1:711650/200‑1 (MQ=255) gccgTCCGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGT‑G‑ATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGAt < 2:567548/234‑1 (MQ=255) gccgTCCGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGT‑G‑ATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGAt < 2:272185/234‑1 (MQ=255) aaGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGT‑G‑ATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAaatga < 2:593602/236‑1 (MQ=255) ttCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGGTTTTTTTT‑G‑ATCCATTTTAAAATAAAAACAAATATCCGATAAAAATAAAAAAGCGTTTCAATTGATTTGGTTTTGATCACTTTTACTGATTaa > 1:194424/1‑227 (MQ=255) ttCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGGTTTTTTGT‑G‑ATCAATTTTAAAATAAAAAAAATGATACGATAAAAATAAAACAGCGGTTCAATTGATAGGGTTTTTATCACTTTTATTGATTaaataaatagt > 1:49650/1‑233 (MQ=255) ttCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGGGGGTTTTTTTT‑G‑ATTAAATTTAAAAAAAAAAAAACAATACGATAAAAATAAAAAAGAGATTCAATTGATGTGGGTTTGTTTACATTTATTGTTTATATAAAA‑Gtg > 2:328837/1‑235 (MQ=255) tggtgAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGT‑G‑ATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAAT‑GTCTATCTTCGtt < 1:413706/236‑1 (MQ=255) tgAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGT‑G‑ATCAATTTCAAAATAAAAACAATGAt < 1:563742/156‑1 (MQ=255) tgAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGT‑G‑ATCAATTTCAAAATAAAAACAATGAt < 1:683112/156‑1 (MQ=255) gAACTGGGACGAAGCAGCGGCACGTTTTGCAGCGAAAAAATAATCATTTGCCGACTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGT‑G‑ATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAAT‑GTCTATCTTCGTTTcc < 1:240121/235‑1 (MQ=255) ggACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTTT‑G‑ATCAATTTTAAAATAAAAAAAATGATCCGataa > 2:683112/1‑156 (MQ=255) ggACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGGTTTTTTTT‑G‑ATCAATTTCTAAATAAAAACAATGATCCCataa > 2:563742/1‑156 (MQ=255) aaGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGGTTTTTTTT‑G‑ATCCATTTTATAATAAAAACAAAGAACCCATAAAAAAAAAAAAGCGGTTTAATTGATTTGGTTTTTATAACTCTTTTTGATTAAATTAATGGTCAAT‑TTCTCTTCCATCAaca > 2:666909/1‑231 (MQ=255) agtcgAAAAAATAATCATTTGCCTCCTTACTCAATGAGGCGTATAGGTCGGATAACAGCTCAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGT‑G‑ATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAAT‑GTCTATCTTCGTTTCCATCAACACTGATGCTCCATTGAGGAATTa < 2:598927/232‑1 (MQ=255) aaaaaaTACTCATTTGCCGCCTGCTGCAATGAAGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGT‑G‑ATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAAT‑GTCTATCTTCGTTTCCATCAACACTGATGCTCCATTGAGGAATTACGCAt < 2:58127/235‑1 (MQ=255) aaaaaaTAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGGTTTTTTTT‑G‑TTTAATTTCAAAATAAAAAAAATGATCCGATAAAAATAAAACAGCGTTTCCATTGATGTGGGGTTGATAACCTTTTTTGATTAAATGAAT‑GTTTATTTTTGGTTCCCTCTAAACTGATTCTCAATTGAGGAATTAAGCAt > 2:312618/1‑235 (MQ=255) aaaaTAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGT‑G‑ATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAAT‑GTCTATCTTCGTTTCCATCAACACTGATGCTCCATTGAGGAATTACGCATCAg < 1:332875/236‑1 (MQ=255) aatgtatCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGT‑G‑ATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAAT‑GTCTATCTTCGTTTCCATCAACACTGATGCTCCATTGAGGAATTACGCATCAg < 2:155809/230‑1 (MQ=255) cgccTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGT‑G‑ATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAAT‑GTCTATCTTCGTTTCCATCAACACTGATGCTCCATTGAGGAATTACGCATCAGCCCTTAAAAATATGc < 1:633283/236‑1 (MQ=255) ctgctgCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGT‑G‑ATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAAT‑GTCTATCTTCGTTTCCATCAACACTGATGCTCCATTGAGGAATTACGCATCAGCCCTTAAAAATATGCCGa < 1:328837/236‑1 (MQ=255) atgctgcAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGT‑G‑ATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAAT‑GTCTATCTTCGTTTCCATCAACACTGATGCTCCATTGAGGAATTACGCATCAGCCCTTAAAAATATGCCGa < 2:512148/235‑1 (MQ=255) tgctgcAATGAAGCGTATGGGCAGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGT‑G‑ATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAAT‑GTCTATCTTCGTTTCCATCAACACTGATGCTCCATTGAGGAATTACGCATCAGCCCTTAAAAATATGCCGAc < 2:82896/236‑1 (MQ=255) gCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGGGGGTTTTTTGTGG‑TTCAATTT‑AAAAAAAAAACAAAGATCCGATAAAAAAAAAAAAGCGTTTTCATTTATGTGGGTTTTATCACTTTTTTTGATTAAATGAAT‑GTCCATCTTCTTTTTCGTTAAACCTGATGTCCCACTTAGGAATTACTCATCAGCCCCTTAAAATAAGCCGACACGCGCTGGaga > 2:358020/1‑234 (MQ=255) tataGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGGGGGTTTTTTTT‑G‑ATCAATTTTAAAATAAAAAAAAAAATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGGTTTTATTACTTTTATTTATTAAATGAAT‑GTCTATATTTGTTTTCATCTACACTCATGCTCCCTCTAGTGATTACGCATCAACCCTCTAAAAAATGCCGACAGATGCTGGAAAtct > 2:158586/1‑234 (MQ=255) gCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGT‑G‑ATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAAt < 1:168039/104‑1 (MQ=255) tCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGT‑G‑ATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAAT‑GTCTATCTTCGtt < 1:520445/149‑1 (MQ=255) tCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGT‑G‑ATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAAT‑GTCTATCTTCGTTTCCATCAACACTGATGCTCCATTGAGGAATTACGCATCAGCCCTTAAAAATATGCCGACAGGTGATGGAAATGCAGATAAAACGCt < 1:666909/235‑1 (MQ=255) gtttAAAAAATGAACCATCGCCAACGGCGGTTGTTTTTTTGT‑G‑ATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAAT‑GTCTATCTTCGTTTCCATCAACACTGATGCTCCATTGAGGAATTACGCATCAGCCCTTAAAAATATGCCGACAGGTGATGGAAATGCAGATAAAACGCTCGAt < 1:538385/234‑1 (MQ=255) aaaaaaTGAACCATCGCCAACGGCGGTGGGTTTTTTTT‑GTTTCAATTT‑AAAATAAAAAAAAAGATCCGGTAAAAATAAAAAAACGGTTTAATTTATTTGGGTTTTTTTACTTTTTTTTTTTTAAAGAAT‑GTTTTTTTTTGtttttaacc > 2:520445/1‑143 (MQ=255) tcAACGGCAGTAGTTTTTTTGT‑G‑ATCAATTACAAAATAAAAACAATGATACGATAAAAATAAATCAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGGAT‑GTCGATCATCGTTTCCAACACCACAGATGCTCCATTGAGGAATTACGCATCAGCCCTTAAAAATATGCCGGCGGGTGATGGAAATGGGGATAAAACGATCGATTGAGAAAATCCCgggagaga < 2:49939/235‑6 (MQ=255) ttttttGT‑G‑ATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAAT‑GTCTATCTTCGTTTCCATCAACACTGATGCTCCATTGAGGAATTACGCATCAGCCCTTAAAAATATGCCGACAGGTGATAGAAATGCAGATAAAACGCTCGATTGAGAAAATCCCGGGGGGGATGATGCTCGTCCCg < 1:291293/236‑1 (MQ=255) tttGT‑G‑ATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAAT‑GTCTATCTTCGTTTCCATCAACACTGATGCTCCATTGAGGAATTACGCATCAGCCCTTAAAAATATGCCGACAGGTGATGGAAATGCAGATTAAAACCTCGATTGAGAAAATTCCGGGGGGGATGATGTACGTTCCGc > 2:258863/1‑234 (MQ=255) tgt‑g‑ATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAAT‑GTCTATCTTCGTTTCCATCAACACTGATGCTCCATTGAGGAATTACGCATCAGCCCTTAAAAATATGCCGACAGGTGATGGAAATGCAGATAAAACGCTCGATTGAGAAAATCCCGGGGGGGATGATGCTCGTCCCGCTAtt < 1:358020/236‑1 (MQ=255) | GCGCTTCCGGCTTCCCGATTATGGGCCTGGATGTGTGGGAACATGCTTACTACCTGAAATTCCAGAACCGCCGTCCGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGT‑G‑ATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAAT‑GTCTATCTTCGTTTCCATCAACACTGATGCTCCATTGAGGAATTACGCATCAGCCCTTAAAAATATGCCGACAGGTGATGGAAATGCAGATAAAACGCTCGATTGAGAAAATCCCGGGGGGGATGATGCTCGTCCCGCTATT > NC_000913/4101282‑4101748 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |