Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	213,847	T→G	E29A (GAG→GCG)	rof ←	modulator of Rho‑dependent transcription termination

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	213,847	0	T	G	100.0%	177.0 / NA	47	E29A (GAG→GCG)	rof	modulator of Rho‑dependent transcription termination
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base G (20/27);  total (20/27)

CGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTCGCTTACCACCACCGTACCGATTTCCGGGTGGCTAAAGCTGGTAATTTTATCCAGACGCAGCTCGCGGGTTTCGCCAGCGGCCTCGACGACCAGGTACTCCACATTTTTGCGGGAGACTAAATCACTGGCTTTTGCCTGCAATTTTTCGCCATCTTTCAGCTCAAGTGTCAGCATTAAATGATGCTGGCAGGCGAGCTCAAGATTATCGTAATCATCACAATTGATTGGTTGATACGTATCATTCATTGACATAATCGCTCACCAGTAAGTTTGCCGCAGCGTATGCTGCTTTTTCCCTGACAGCCTCAGAAAGGGCGTCGTCGGCAGCCATTTCATTCAGCACTTTCAAAACGCAGCCCAGCGCGT  >  NC_000913/213619‑214052                                                                                                                                                                                                                                     |                                                                                                                                                                                                              cGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACTTCGCGTCCGGCGAAAGTCAATCAGGATTCGCTTACCCCCACCGTACCGATTTCCGGGTGGCTAAAGCTGGTAATTTTATCCAGACGCAGCTCGCGGGTTTCGCCAGCGGCCTCGACGACCAGGTACTCCACATTTTTGCGGGAGACTAAATCACTGGCTTTTGCCTGCAATTTTTCGCCATCTTTCAGCGCAAgtgt                                                                                                                                                                                                        <  1:664700/236‑1 (MQ=255) cGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTCGCTTACCACCACCGTACCGATTTCCGGGTGGCTAAAGCTGGTAATTTTATCCAGACGCAGCTCGCGGGTTTCGCCAGCGGCCTCGACGACCAGGTACTCCACATTTTTGCGGGAGACTAAATCACTGGCTTTTGCCTGCAATTTTTCGCCATCTTTCAGCGCAAgtgt                                                                                                                                                                                                        <  1:393699/236‑1 (MQ=255) cGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTCGCTTACCACCACCGTACCGATTTCCGGGTGGCTAAAGCTGGTAATTTTATCCAGACGCAGCTCGCGGGTTTCGCCAGCGGCCTCGACGACCAGGTACTCCACATTTTTGCGGGAGACTAAATCACTGGCTTTTGCCTGCAATTTTTCGCCATCTTTCAGCGCAAgtgt                                                                                                                                                                                                        <  2:561729/236‑1 (MQ=255)     tAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTCGCTTACCACCACCGTACCGATTTCCGGGTGGCTAAAGCTGGTAATTTTATCCAGACGCAGCTCGCGGGTTTCGCCAGCGGCCTCGACGACCAGGTACTCCACATTTTTGCGGGAGACTAAATCACTGGCTTTTGCCTGCAATTTTTCGCCATCTTTCAGCGCAAgtgt                                                                                                                                                                                                        <  2:614567/232‑1 (MQ=255)                 aGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTCGCTTACCACCACCGTACCGATTTCCGGGTGGCTAAAGCTGGTAATTTTATCCAGACGCAGCTCGCGGGTTTCGCCAGCGGCCTCGACGACCAGGTACTCCACATTTTTGCGGGAGACTAAATCACTGGCTTTTGCCTGCAATTTTTCGCCATCTTTCAGCGCAAGTGTCAGCATTAAat                                                                                                                                                                                             >  1:49907/1‑231 (MQ=255)                  gCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTCGCTTACCACCACCGTACCGATTTCCGGGTGGCTAAAGCTGGTAATTTTATCCAGACGCAGCTCGCGGGTTTCGCCAGCGGCCTCGACGACCAGGTACTCCACATTTTTGCGGGAGACTAAATCACTGGCTTTTGCCTGCAATTTTTCGCCATCTTTCAGCGCAAGTGTCAGCATTAAATGATGCt                                                                                                                                                                                       >  1:356333/1‑236 (MQ=255)                       aTAAGACGCATCAAGCGTCGCATCCGGCGAAAGTCAATCAGGATTCGCTTACCACCACCGTACCGATTTCCGGGTGGCTAAAGCTGGTAATTTTATCCAGGCGCAGCTCGCGGGTTTCGCCAGCGGCCTCGACGACCAGGTACTCCACATTTTTGCGGGAGACTAAATCACTGGCTTTTGCCTGCAATTTTTCGCCATCTTTCAGCGCAAGTGTCAGCATTAAatgat                                                                                                                                                                                          <  1:669753/228‑1 (MQ=255)                          agccGCATCAAACGGCGCTTCCGGCGAAAGTCAATCAGGATTCGCTTACCACCACCGTACCGATTTCCGGGTGGCTAAAGCTGGTAATTTTATCCAGACGCAGCTCGCGGGTTTCGCCAGCGGCCTCGACGACCAGGTACTCCACATTTTTGCGGGAGACTAAATCACTGGCTTTTGCCTGCAATTTTTCGCCATCTTTCAGCGCAAGTGTCAGCATTAAATGATGCTGGCAGGc                                                                                                                                                                                <  2:319009/232‑1 (MQ=255)                                   aatcGTCGCATCCGGCGAAAGTCAATCAGGATTCGCTTACCACCACCGTACCGATTTCCGGGTGGCTAAAGCTGGTAATTTTATCCAGACGCAGCTCGCGGGTTTCGCCAGCGGCCTCGACGACCAGGTACTCCACATTTTTGCGGGAGACTAAATCACTGGCTTTTGCCTGCAATTTTTCGCCATCTTTCAGCGCAAGTGTCAGCATTAAATGATGCTGGCAGGCGAGCTCAAGa                                                                                                                                                                      <  1:41274/233‑1 (MQ=255)                                                cggcaaaGTCAATCCGGTTTCGCTTACCACCACCGTACCGATTTCCGGGTGGCTAAAGCTGGTAATTTTATCCAGACGCAGCTCGCGGGTTTCGCCAGCGGCCTCGACGACCAGGTACTCCACATTTTTGCGGGAGACTAAATCACTGGCTTTTGCCTGCAATTTTTCGCCATCTTTCAGCGCAAGTGTCAGCATTAAATGATGCTGGCAGGCGAGCTCAAGATTATCGTAatcat                                                                                                                                                         <  2:706550/232‑1 (MQ=255)                                                           aTCAGGATTCGCTTACCACCACCGTACCGATTTCCGGGTGGCTAAAGCTGGTAATTTTATCCAGACGCAGCTCGCGGGTTTCGCCAGCGGCCTCGACGACCAGGTACTCCACATTTTTGCGGGAGACTAAATCACTGGCTTTTGCCTGCAATTTTTCGCCATCTTTCAGCGCAAGTGTCAGCATTAAATGATGCTGGCAGGCGAGCTCAAGATTATCGTAATCATCACAattgatt                                                                                                                                              <  1:400149/236‑1 (MQ=255)                                                            tCAGGTTTCGCTTACCACCACCGTACCGATTTCCGGGTGGCTAAAGCTGGTAATTTTATCCAGACGCAGCTCGCGGGTTTCGCCAGCGGCCTCGACGACCAGGTACTCCACATTTTTGCGGGAGACTAAATCACTGGCTTTTGCCTGCAATTTTTCGCCATCTTTCAGCGCAAGTGTCAGCATTAAATGATGCTGGCAGGCGAGCTCAAGATTATCGTAATCATCACAattgat                                                                                                                                               <  2:131514/234‑1 (MQ=255)                                                            tCAGGATTCGCTTACCACCACCGTACCGATTTCCGGGTGGCTAAAGCTGGTAATTTTATCCAGACGCAGCTCGCGGGTTTCGCCAGCGGCCTCGACGACCAGGTACTCCACATTTTTGCGGGAGACTAAATCACTGGCTTTTGCCTGCAATTTTTCGCCATCTTTCAGCGCAAGTGTCAGCATTAAATGATGCTGGCAGGCGAGCTCAAGATTATCGTAATCATCACAattgat                                                                                                                                               <  1:90404/234‑1 (MQ=255)                                                             cAGGATTCGCTTACCACCACCGTACCGATTTCCGGGTGGCTAAAGCTGGTAATTTTATCCAGACGCAGCTCGCGGGTTTCGCCAGCGGCCTCGACGACCAGGTACTCCACATTTTTGCGGGAGACTAAATCACTGGCTTTTGCCTGCAATTTTTCGCCATCTTTCAGCGCAAGTGTCAGCATTAAATGATGCTGGCAGGCGAGCTCAAGATTATCGTAATCATCACAATTGATTgg                                                                                                                                            <  1:279871/236‑1 (MQ=255)                                                                    cGCTTACCGCCACCGTCCCGATTTCCGGGTGGCTAAAGCTGGTAATTTTATCCAGAAGCAGCTCGCGGGTTTCGCCAGCGGCCTCGACGACCAGGTACTCCACATTGTTGCGGGAGACTAAATCACTGGCTTTTGCCTGCAATTTTTCGCCATCTTTCAGCGCAAGTGTCAGCATTAAATGATGCTGGCAGGCGAGCTCAAGATTATCGTAATCATCACAATTGATTGGTTGAt                                                                                                                                       <  2:566970/234‑1 (MQ=255)                                                                      cTTACCACCACCGTACCGATTTCCGGGTGGCTAAAGCTGGTAATTTTATCCAGACGCAGCTCGCGGGTTTCGCCAGCGGCCTCGACGACCAGGTACTCCACATTTTTGCGGGAGACTAAATCACTGGCTTTTGCCTGCAATTTTTCGCCATCTTTCAGCGCAAGTGTCAGCATTAAATGATGCTGGCAGGCTAGCTCAAGATTATCGTAATAATCACAATTGATTGGTTGATACGt                                                                                                                                   >  1:707542/1‑236 (MQ=255)                                                                       ttACCACCACCGTACCGATTTCCGGGTGGCTAAAGCTGGTAATTTTATCCAGACGCAGCTCGCGGGTTTCGCCAGCGGCCTCGACGACCAGGTACTCCACATTTTTGCGGGAGACTAAATCACTGGCTTTTGCCTGCAATTTTTCGCCATCTTTCAGCGCAAGTGTCAGCATTAAATGATGCTGGCAGGCGAGCTCAAGATTATCGTAATCATCACAattga                                                                                                                                                >  2:169331/1‑222 (MQ=255)                                                                       ttACCACCACCGTACCGATTTCCGGGTGGCTAAAGCTGGTAATTTTATCCAGACGCAGCTCGCGGGTTTCGCCAGCGGCCTCGACGACCAGGTACTCCACATTTTTGCGGGAGACTAAATCACTGGCTTTTGCCTGCAATTTTTCGCCATCTTTCAGCGCAAGTGTCAGCATTAAATGATGCTGGCAGGCGAGCTCAAGATTATCGTAATCATCACAattga                                                                                                                                                <  1:169331/222‑1 (MQ=255)                                                                        tACCACCACAGTCCCG‑TTTCCGGGTGGCTAAAGCTGGTAATTTTATCCAGACGCAGCTCGCGGGTTTCGCCAGCGGCCTCGACGACCAGGTACTCCACATTTTTGCGGGAGACTAAATCACTGGCTTTTGCCTGCAATTTTTCGCCATCTTTCAGCGCAAGTGTCAGCATTAAATGATGCTGGCAGGCGAGCTCAAGATTATCGTAATCATCACAATTGATTGGTTGATACGTAtc                                                                                                                                <  1:603340/236‑1 (MQ=255)                                                                               cacGTAACGATTTCCTGGTGGCTAAAGCTGGTAATTTTATCCAGACGCAGCTCGCGGGTTTCGCCAGCGGCCTCGACGACCAGGTACTCCACATTTTTGCGGGAGACTAAATCACTGGCTTTTGCCTGCAATTTTTCGCCATCTTTCAGCGCAAGTGTCAGCATTAAATGATGCTGGCAGGCGAGCTCAAGATTATCGTAATCATCACAATTGATTGGTTGATACGTAtcattcat                                                                                                                          <  2:438318/234‑1 (MQ=255)                                                                                ccGTACCGATTTCCGGGTGGCTAAAGCTGGTAATTTTATCCAGACGCAGCTCGCGGGTTTCGCCAGCGGCCTCGACGACCAGGTACTCCACATTTTTGCGGGAGACTAAATCACTGGCTTTTGCCTGCAATTTTTCGCCATCTTTCAGCGCAAGTGTCAGCATTAAATGATGCTGGCAGGCGAGCTCAAGATTATCGTAATCATCACAATTGATTGGTTGATACGTATcattcatt                                                                                                                         >  2:368951/1‑236 (MQ=255)                                                                                 cGTACCGATTTCCGGGTGGCTAAAGCTGGTAATTTTATCCAGACGCAGCTCGCGGGTTTCGCCAGCGGCCTCGACGACCAGGTACTCCACATTTTTGCGGGAGACTAAATCACTGGCTTTTGCCTGCAATTTTTCGCCATCTTTCAGCGCAAGTGTCAGCATTAAATGATGCTGGCAGGCGAGCTCAAGATTATCGTAATCATCACAATTGATTGGTTGATACGTATCATTCATTg                                                                                                                        >  1:84146/1‑236 (MQ=255)                                                                                     ccGATTTCCGGGTGGCTAAAGCTGGTAATTTTATCCAGACGCAGCTCGCGGGTTTCGCCAGCGGCCTCGACGACCAGGTACTCCACATTTTTGCGGGAGACTAAATCACTGGCTTTTGCCTGCAATTTTTCGCCATCTTTCAGCGCAAGTGTCAGCATTAAATGATGCTGGCAGGCGAGCTCAAGATTATCGTAATCATCACAATTGATTGGTTGATACGTATCATTCATTGACa                                                                                                                     >  1:376824/1‑235 (MQ=255)                                                                                          ttCCGGGTGGCTAAAGCTGGTAATTTTATCCAGACGCAGCTCGCGGGTTTCGCCAGCGGCCTCGACGACCAGGTACTCCACATTTTTGCGGGAGACTAAATCACTGGCTTTTGCCTGCAATTTTTCGCCATCTTTCAGCGCAAGTGTCAGCATTAAATGATGCTGGCAGGCGAGCTCAAGATTATCGTAATCATCACAattgat                                                                                                                                               >  1:428888/1‑204 (MQ=255)                                                                                          ttCCGGGTGGCTAAAGCTGGTAATTTTATCCAGACGCAGCTCGCGGGTTTCGCCAGCGGCCTCGACGACCAGGTACTCCACATTTTTGCGGGAGACTAAATCACTGGCTTTTGCCTGCAATTTTTCGCCATCTTTCAGCGCAAGTGTCAGCATTAAATGATGCTGGCAGGCGAGCTCAAGATTATCGTAATCATCACAattgat                                                                                                                                               <  2:428888/204‑1 (MQ=255)                                                                                            ccGGGTGGCTAAAGCTGGTAATTTTATCCAGACGCAGCTCGCGGGTTTCGCCAGCGGCCTCGACGACCAGGTACTCCACATTTTTGCGGGAGACTAAATCACTGGCTTTTGCCTGCAATTTTTCGCCATCTTTCAGCGCAAGTGTCAGCATTAAATGATGCTGGCAGGCGAGCTCAAGATTATCGTAATCATCACAATTGATTGGTTGATACGTATCATTCATTGACATAATCGCt                                                                                                             <  2:356333/236‑1 (MQ=255)                                                                                             cGGGTGGCTAAAGCTGGTAATTTTATCCAGACGCAGCTCGCGGGTTTCGCCAGCGGCCTCGACGACCAGGTACTCCACATTTTTGCGGGAGACTAAATCACTGGCTTTTGCCTGCAATTTTTCGCCATCTTTCAGCGCAAGTGTCAGCATTAAATGATGCTGGCAGGCGAGCTCAAGATTATCGTAATCATCCCAATTGATTGGTTGATACGTATCATTCATTGACATAATCGCTc                                                                                                            >  2:482102/1‑236 (MQ=255)                                                                                             cGGGTGGCTAAAGCTCGTAATTTTACCCCAACGCAGCTCGCGGGTTTCGCCAGCGGCCTAGACGACCAGGTACTCCACATTTTTGCGGGAGACTAAATCACTGGCTTTTGCCTGCAATTTTTCGCCATCTTTCAGCGCAAGTGTCAGCATTAAATGATGCTGGCAGGCGAGCTCAAGATTATCGTAATCATCACAATGGATTGGTTGATACGTATCATTCATTGACATAATCGCt                                                                                                             <  2:460707/235‑1 (MQ=255)                                                                                                             gTAATTTTATCCAGACGCAGCTCGCGGGTTTCGCCAGCGGCCTCGACGACCAGGTACTCCACATTTTTGCGGGAGACTAAATCACTGGCTTTTGCCTGCAATTTTTCGCCATCTTTCAGCGCAAGTGTCAGCATTAAATGATGCTGGCAGGCGAGCTCAAGATTATc                                                                                                                                                                 >  2:633752/1‑167 (MQ=255)                                                                                                             gTAATTTTATCCAGACGCAGCTCGCGGGTTTCGCCAGCGGCCTCGACGACCAGGTACTCCACATTTTTGCGGGAGACTAAATCACTGGCTTTTGCCTGCAATTTTTCGCCATCTTTCAGCGCAAGTGTCAGCATTAAATGATGCTGGCAGGCGAGCTCAAGATTATc                                                                                                                                                                 <  1:633752/167‑1 (MQ=255)                                                                                                                        cAGACGCAGCTCGCGGGTTTCGCCAGCGGCCTCGACGACCAGGTACTCCACATTTTTGCGGGAGACTAAATCACTGGCTTTTGCCTGCAATTTTTCGCCATCTTTCAGCGCAAGTGTCAGCATTAAATGATGCTGGCAGGCGAGCTCAAGATTATCGTAATCATCACAATTGATTGGTTGATACGTATCATTCATTGACATAATCGCTCACCAGTAAGTTTGCCGCAGCGTAtgct                                                                                 >  1:575554/1‑236 (MQ=255)                                                                                                                               aGCTCGCGGGTTTCGCCAGCGGCCTCGACGACCAGGTACTCCACATTTTTGCGGGAGACTAAATCACTGGCTTTTGCCTGCAATTTTTCGCCATCTTTCAGCGCAAGTGTCAGCATTAAATGATGCTGGCAGGCGAGCTCAAGATTATCGTAATCATCACAATTGATTGGTTGATACGTATCATTCATTGACATAATCGCTCACCAGTAAGTTTGCCGCAGCGTATgctgct                                                                              <  1:368951/232‑1 (MQ=255)                                                                                                                                         tttCGCCAGCGGCCTCGACGACCAGGTACTCCACATTTTTGCGGGAGACTAAATCACTGGCTTTTGCCTGCAATTTTTCGCCATCTTTCAGCGCAAGTGTCAGCATTAAATGATGCTGGCAGGCGAGCTCAAGATTATCGTAATCATCACAATTGATTGGTTGATACGTATCATTCATTGACATAATCGCTCACCAGTAAGTTTGCCGCAGCGTATGCTGCTTTTTCCCTGACAGc                                                                <  1:490777/236‑1 (MQ=255)                                                                                                                                              ccAGCGGCCTCGACGACCAGGTACTCCACATTTTTGCGGGAGACTAAATCACTGGCTTTTGCCTGCAATTTTTCGCCATCTTTCAGCGCAAGTGTCAGCATTAAATGATGCTGGCAGGCGAGCTCAAGATTATCGTAATCATCACAATTGATTGGTTGATACGTATCATTCATTGACATAATCGCTCACCAGTAAGTTTGCCGCAGCGTATGCTGCTTTTTCCCTGACAGCCTCAg                                                           <  2:575554/236‑1 (MQ=255)                                                                                                                                                                        cacaTTTTTGCGGGAGACTAAATCACTGGCTTTTGCCTGCAATTTTTCGCCATCTTTCAGCGCAAGTGTCAGCATTAAATGATGCTGGCAGGCGAGCTCAAGATTATCGTAATCATCACAATTGATTGGTTGATACGTATCATTCATTGACAt                                                                                                                    >  1:168891/1‑153 (MQ=255)                                                                                                                                                                        cacaTTTTTGCGGGAGACTAAATCACTGGCTTTTGCCTGCAATTTTTCGCCATCTTTCAGCGCAAGTGTCAGCATTAAATGATGCTGGCAGGCGAGCTCAAGATTATCGTAATCATCACAATTGATTGGTTGATACGTATCATTCATTGACAt                                                                                                                    <  2:168891/153‑1 (MQ=255)                                                                                                                                                                        cacaTTTTTGCGGGAGACTAAATCACTGGCTTTTGCCTGCAATTTTTCGCCATCTTTCAGCGCAAGTGTCAGCATTAAATGATGCTGGCAGGCGAGCTCAAGATTATCGTAATCATCACAATTGATTGGTTGATACGTATCATTCATTGACATAATCGCTCACCAGTAAGTTTGCCGCAGCGTATGCTGCTTTTTCCCTGAc                                                                   <  2:259962/202‑1 (MQ=255)                                                                                                                                                                        cacaTTTTTGCGGGAGACTAAATCACTGGCTTTTGCCTGCAATTTTTCGCCATCTTTCAGCGCAAGTGTCAGCATTAAATGATGCTGGCAGGCGAGCTCAAGATTATCGTAATCATCACAATTGATTGGTTGATACGTATCATTCATTGACATAATCGCTCACCAGTAAGTTTGCCGCAGCGTATGCTGCTTTTTCCCTGAc                                                                   >  1:259962/1‑202 (MQ=255)                                                                                                                                                                        cacaTTTTTGCGGGAGACTAAATCACTGGCTTTTGCCTGCAATTTTTCGCCATCTTTCAGCGCAAGTGTCAGCATTAAATGATGCTGGCAGGCGAGCTCAAGATTATCGTAATCATCACAATTGATTGGTTGATACGTATCATTCATTGACATAATCGCTCACCAGTAAGTTTGCCGCAGCGTATGCTGCTTTTTCCCTGACAGCCTCAGAAAGTGCGTCGTCGGCAGCCATttca                                 >  1:167558/1‑236 (MQ=255)                                                                                                                                                                        cacaTTTTTGCGGGAGACTAAATCACTGGCTTTTGCCTGCAATTTTTCGCCATCTTTCAGCGCAAGTGTCAGCATTAAATGATGCTGGCAGGCGAGCTCAAGATTATCGTAATCATCACAATTGATTGGTTGATACGTATCATTCATTGACATAATCGCTCACCAGTAAGTTTGCCGCAGCGTATGCTGCTTTTTCCCTGACAGCCTCAGAAAGGGCGTCGTCGGCAGCCATttca                                 >  1:665531/1‑236 (MQ=255)                                                                                                                                                                           aTTTTTGCGGGAGACTAAATCACTGGCTTTTGCCTGCAATTTTTCGCCATCTTTCAGCGCAAGTGTCAGCATTAAATGATGCTGGCAGGCGAGCTCAAGATTATCGTAATCATCACAATTGATTGGTTGATACGTATCATTCATTGACATAATCGCTCACCAGTAAGTTTGCCGCAGCGTATGCTGCTTTTTCCCTGACAGCCTCAGAAAGGGCGTCGTCGGCAGCCATttcgttc                              >  1:274546/1‑236 (MQ=255)                                                                                                                                                                                                  tGGCTTTTGCCTGCAATTTTTCGCCATCTTTCAGCGCAAGTGTCAGCATTAAATGATGCTGGCAGGCGAGCTCAAGATTATCGTAATCATCACAATTGATTGGTTGATACGTATCATTCATTGACATAATCGCTCACCAGTAAGTTTGCCGCAGCGTATGCTGCTTTTTCCCTGACAGCCTc                                                             >  2:340711/1‑182 (MQ=255)                                                                                                                                                                                                  tGGCTTTTGCCTGCAATTTTTCGCCATCTTTCAGCGCAAGTGTCAGCATTAAATGATGCTGGCAGGCGAGCTCAAGATTATCGTAATCATCACAATTGATTGGTTGATACGTATCATTCATTGACATAATCGCTCACCAGTAAGTTTGCCGCAGCGTATGCTGCTTTTTCCCTGACAGCCTc                                                             <  1:340711/182‑1 (MQ=255)                                                                                                                                                                                                  tGGCTTTTGCCTGCAATTTTTCGCCATCTTTCAGCGCAAGTGTCAGCATTAAATGATGCTGGCAGGCGAGCTCAAGATTATCGTAATCATCACAATTGATTGGTTGATACGTATCATTCATTGACATAATCGCTCACCAGTAAGTTTGCCGCAGCGTATGCTGCTTTTTCCCTGACAGCCTCAGAAAGGGCGTCGTCGGCAGCCATTTCATTCAGCACTTTCAAAACGCAGCCCAg       >  1:326541/1‑236 (MQ=255)                                                                                                                                                                                                       tttGCCTGCAATTTTTCGCCATCTTTCAGCGCAAGTGTCAGCATTAAATGATGCTGGCAGGCGAGCTCAAGATTATCGTAATCATCACAATTGATTGGTTGATACGTATCATTCATTGACATAATCGCTCACCAGTAAGTTTGCCGCAGCGTATGCTGCTTTTTCCCTGACAGCCTCAGAAAGGGCGTCGTCGGCAGCCATTTCATTCAGCACTTTCAAAACGCAGCCCAGCGCGt  >  1:544660/1‑236 (MQ=255)                                                                                                                                                                                                               cAATTTTTCGCCATCTTTCAGCGCAAGTGTCAGCATTAAATGATGCTGGCAGGCg                                                                                                                                                                               <  2:305163/55‑1 (MQ=255)                                                                                                                                                                                                               cAATTTTTCGCCATCTTTCAGCGCAAGTGTCAGCATTAAATGATGCTGGCAGGCg                                                                                                                                                                               >  1:305163/1‑55 (MQ=255)                                                                                                                                                                                                                                     |                                                                                                                                                                                                              CGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTCGCTTACCACCACCGTACCGATTTCCGGGTGGCTAAAGCTGGTAATTTTATCCAGACGCAGCTCGCGGGTTTCGCCAGCGGCCTCGACGACCAGGTACTCCACATTTTTGCGGGAGACTAAATCACTGGCTTTTGCCTGCAATTTTTCGCCATCTTTCAGCTCAAGTGTCAGCATTAAATGATGCTGGCAGGCGAGCTCAAGATTATCGTAATCATCACAATTGATTGGTTGATACGTATCATTCATTGACATAATCGCTCACCAGTAAGTTTGCCGCAGCGTATGCTGCTTTTTCCCTGACAGCCTCAGAAAGGGCGTCGTCGGCAGCCATTTCATTCAGCACTTTCAAAACGCAGCCCAGCGCGT  >  NC_000913/213619‑214052

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑