Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,393,985	A→C	P758P (CCT→CCG)	yhdP ←	DUF3971‑AsmA2 domains protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,393,985	0	A	C	100.0%	213.6 / NA	59	P758P (CCT→CCG)	yhdP	DUF3971‑AsmA2 domains protein
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base C (34/25);  total (34/25)

TCAAAGCTGTTGAGATTGCCATCAACCTTAACGTTTACCGCTAGTGGTTCACCCGCAGGTTTGGCTAACGGTGAAGGTAAGTGACTGCTCACATTCTTTAGATCGCCGTTCAGCTCTATGTTATAGGTCGCACCAGCATGATAAGGCAGATCAATGCCCACTTTACCATCCCACGCCACGCTGCCACTCAATGCTTCGTTCACCGCTTCAGGCAGAACGCCGGTTTTCGCCGGTTGCCAGTTACCGTTGAGGTTTACCGCTACCTGGTAGGCTTTTGCCCCTTCTTTGGTGGAAAAATCCACGTTCAACGGCTGATTAAACCAGCTTGCTGTCAGTGGTTCACTTTGCAGATCGCTATTGATAAAGCTGAATTTACCGCTCAAATTTTTCAGGGTGCTGTCGAGTGGTTTGATAAACAGACTGTTATTACGCAGCGTCA  >  NC_000913/3393776‑3394214                                                                                                                                                                                                                  |                                                                                                                                                                                                                                      tCAATGCTGTTGAGATTGCCATCAACCTTAACGTTTACCGCTAGTGGTTCACCCGCAGGTTTGGCTAACGGTGAAGGTAAGTGACTGCTCACATTCTTTAGATCGCCGTTCAGCTCTATGTTATAGGTCGCACCAGCATGATAAGGCAGATCAATGCCCACTTTACCATCCCACGCCACGCTGCCACTCAATGCTTCGTTCACCGCTTCCGGCAGAACGCCGGTTTTCGCCGGTTg                                                                                                                                                                                                             <  2:90844/236‑1 (MQ=255)          ttGAGATTGCCATCAACCTTAACGTTTACCGCTAGTGGTTCACCCGCAGGTTTGGCTAACGGTGAAGGTAAGTGACTGCTCACATTCTTTAGATCGCCGTTCAGCTCTATGTTATAGGTCGCACCAGCATGATAAGGCAGATCAATGCCCACTTTACCATCCCACGCCAAGCTGCCACTCAATGCTTCGTTCACCGCTTCCGGCAGAACGCCGGTTTTCGCCGGTTGCCAGTTAcc                                                                                                                                                                                                    >  2:365933/1‑236 (MQ=255)           tGAGATTGCCATCAACCTTAACGTTTACCGCTAGTGTTTCACCCGCAGGTTTGGCTAACGGTGAAGGTAAGTGACTGCTCACATTCTTTAGATCGCCGTTCAGCTCTATGTTATAGGTCGCACCAGCATGATAAGGCAGATCAATGCCCACTTTACCATCCCACGCCACGCTGCCACTCAATGCTTCGTTCACCGCTTCCGGCAGAACGCCGGTTTTCGCCGGTTGCCAGTTACCg                                                                                                                                                                                                   <  1:228256/236‑1 (MQ=255)               aTTGCCATCAACCTTAACGTTTACCGCTAGTGGTTCACCCGCAGGTTTGGCTAACGGTGAAGGTAAGTGACTGCTCACATTCTTTAGATCGCCGTTCAGCTCTATGTTATAGGTCGCACCAGCATGATAAGGCAGATCAATGCCCACTTTACCATCCCACGCCACGCTGCCACTCAATGCTTCGTTCACCGCTTCCGGCAGAACGCCGGTTTTCGCCGGTTGCCAGTTACCGTTGa                                                                                                                                                                                               >  1:123385/1‑236 (MQ=255)                 tGCCATCAACCTTAACGTTTACCGCTAGTGGTTCACCCGCAGGTTTGGCTAACGGTGAAGGTAAGTGACTGCTCACATTCTTTAGATCGCCGTTCAGCTCTATGTTATAGGTCGCACCAGCATGATAAGGCAGATCAATGCCCACTTTACCATCCCACGCCACGCTGCCACTCAATGCTTCGTTCACCGCTTCCGGCAGAACGCCGGTTTTCGCCGGTTGCCAGTTACCGTTGAg                                                                                                                                                                                              >  1:429257/1‑235 (MQ=255)                    cATCAACCTTAACGTTTACCGCTAGTGGTTCACCCGCAGGTTTGGCTAACGGTGAAGGTAAGTGACTGCTCACATTCTTTAGATCGCCGTTCAGCTCTATGTTATAGGTCGCACCAGCATGATAAGGCAGATCAATGCCCACTTTACCATCCCACGCCACGCTGCCACTCAATGCTTCGTTCACCGCTTCCGGCAGAACGCCGGTTTTCGCCGGTTGCCAGTTACCg                                                                                                                                                                                                   >  1:733252/1‑227 (MQ=255)                    cATCAACCTTAACGTTTACCGCTAGTGGTTCACCCGCAGGTTTGGCTAACGGTGAAGGTAAGTGACTGCTCACATTCTTTAGATCGCCGTTCAGCTCTATGTTATAGGTCGCACCAGCATGATAAGGCAGATCAATGCCCACTTTACCATCCCACGCCACGCTGCCACTCAATGCTTCGTTCACCGCTTCCGGCAGAACGCCGGTTTTCGCCGGTTGCCAGTTACCg                                                                                                                                                                                                   <  2:733252/227‑1 (MQ=255)                        aaCCTTAACGTTTACCGCTAGTGGTTCACCCGCAGGTTTGGCTAACGGTGAAGGTAAGTGACTGCTCACATTCTTTAGATCGCCGTTCAGCTCTATGTTATAGGTCGCACCAGCATGATAAGGCAGATCAATGCCCACTTTACCATCCCACGCCACGCTGCCACTCAATGCTTCGTTCACCGCTTCCGGCAGAACGCCGGTTTTCGCCGGTTGCCAGTTACCGTTGAGGTTTACCg                                                                                                                                                                                      <  1:705274/236‑1 (MQ=255)                                    tACCGCTAGTGGTTCACCCGCAGGTTTGGCTAACGGTGAAGGTAAGTGACTGCTCACATTCTTTAGATCGCCGTTCAGCTCTATGTTATAGGTCGCACCAGCATGATAAGGCAGATCAATGCCCACTTTACCATCCCACGCCACGCTGCCACTCAATGCTTCGTTCACCGCTTCCGGCAGAACGCCGGTTTTCGCCGGTTGCCAGTTACCGTTGAGGTTTACCGCTACCTGGTAgg                                                                                                                                                                          >  2:750563/1‑236 (MQ=255)                                                    cccGCAGGTTTGGCTAACGGTGAAGGTAAGTGACTGCTCACATTCTTTAGATCGCCGTTCAGCTCTATGTTATAGGTCGCACCAGCATGATAAGGCAGATCAATGCCCACTTTACCATCCCACGCCACGCTGCCACTCAATGCTTCGTTCACCGCTTCCGGCAGAACGCCGGTTTTCGCCGGTTGCCAGTTACCGTTGAGGTTTACCGCTACCTGGTAGGCTTTTGCCCCTTCttt                                                                                                                                                          >  1:492865/1‑236 (MQ=255)                                                        cAGGTTTGGCTAACGGTGAAGGTAAGTGACTGCTCACATTCTTTAGATCGCCGTTCAGCTCTATGTTATAGGTCGCACCAGCATGATAAGGCAGATCAATGCCCACTTTACCATCCCACGCCACGCTGCCACTCAATGCTTCGTTCACCGCTTCCGGCAGAACGCCGGTTTTCGCCGGTTGCCAGTTACCGTTGAGGTTTACCGCTACCTGGTAGGCTTTTGCACCTTCTTttgtg                                                                                                                                                      >  1:495917/1‑236 (MQ=255)                                                                  tAACGGTGAAGGTAAGTGACTGCTCACATTCTTTAGATCGCCGTTCAGCTCTATGTTATAGGTCGCACCAGCATGATAAGGCAGATCAATGCCCACTTTACCATCCCACGCCACGCTGCCACTCAATGCTTCGTTCACCGCTTCCGGCAGAACGCCGGTTTTCGCCGGTTGCCAGTTACCGTTGAGGTTTACCGCTACCTGGTAGGCTTTTGCCCCTTCTTTGGTGGAAAAATCCa                                                                                                                                            <  1:581415/236‑1 (MQ=255)                                                                  tAACGGTGAAGGTAAGTGACTGCTCACATTCTTTAGATCGCCGTTCAGCTCTATGTTATAGGTCGCACCAGCATGATAAGGCAGATCAATGCCCACTTTACCATCCCACGCCACGCTGCCACTCAATGCTTCGTTCACCGCTTCCGGCAGAACGCCGGTTTTCGCCGGTTGCCAGTTACCGTTGAGGTTTACCGCTACCTGGTAGGCTTTTGCCCCTTCTTTGGTGGAAAAATCCa                                                                                                                                            <  1:46334/236‑1 (MQ=255)                                                                          aaGGTAAGTCACTGATCACATTCTTTAGATCGCCGTTCAGCTC‑‑TGTTAGTGGTCGCCCCAGCATGATAAGGCAGATCAATGCCCACTTTACCATCCCACGCCACGCTGCCACTCAATGCTTCGTTCACCGCTTCCGGCAGAACGCCGGTTTTCGCCGGTTGCCAGTTACCGTTGAGGTTTACCGCTACCTGGTAGGCTTTTGCCCCTTCTTTGGTGGAAAAATCCACGTTCAACgg                                                                                                                                  <  2:240517/236‑1 (MQ=255)                                                                            ggTAAGTGCCTGCTAACATTCTTTAGATCGCCGTTCAGCTCTATGTTAAAGGTCGCACCAGCATGATAAGGCAGATCAATGCCCACTTTACCATCCCACGCCACGCTGCCACTCAATGCTTCGTTCACCGCTTCCGGCAGAACGCCGGTTTTCGCCGGTTGCCAGTTACCGTTGAGGTTTACCGCTACCTGGTAGGCTTTTGCCCCTTCTTTGGTGGAAAAATCCACGTTCAACgg                                                                                                                                  <  2:123385/236‑1 (MQ=255)                                                                                       gCTCACATTCTTTAGATCGCCGTTCAGCTCTATGTTATAGGTCGCACCAGCATGATAAGGCAGATCAATGCCCACTTTACCATCCCACGCCACGCTGCCACTCAATGCTTCGTTCACCGCTTCCGGCCGAACGCCGGTTTTCGCCGGTTGCCAGTTACCGTTGAGGTTTTCCGCTACCTGGTAGGCTTTTGCCCCTTCTTTGGTGGAAAAATCCACGTCCAATGGCAGATTtaa                                                                                                                         >  2:359316/1‑234 (MQ=255)                                                                                            caTTCTTTAGATCGCCGTTCAGCTCTATGTTATAGGTCGCACCAGCATGATAAGGCAGATCAATGCCCACTTTACCATCCCACGCCACGCTGCCACTCAATGCTTCGTTCACCGCTTCCGGCAGAACGCCGGTTTTCGCCGGTTGCCAGTTACCGTTGAGGTTTACCGCTACCTGGTAGGCTTTTGCCCCTTCTTTGGTGGAAAAATCCACGTTCAACGGCTGATTAAACCAGCtt                                                                                                                  <  1:750563/236‑1 (MQ=255)                                                                                                         gCCGTTCAGCTCTATGTTATAGGTCGCACCAGCATGATAAGGCAGATCAATGCCCACTTTACCATCCCACGCCACGCTGCCACTCAATGCTTCGTTCACCGCTTCCGGCAGAACg                                                                                                                                                                                                                              >  1:359856/1‑115 (MQ=255)                                                                                                         gCCGTTCAGCTCTATGTTATAGGTCGCACCAGCATGATAAGGCAGATCAATGCCCACTTTACCATCCCACGCCACGCTGCCACTCAATGCTTCGTTCACCGCTTCCGGCAGAACg                                                                                                                                                                                                                              <  2:359856/115‑1 (MQ=255)                                                                                                           cGTTCAGCTCTATGTTATAGGTCGCACCAGCATGATAAGGCAGATCAATGCCCACTTTACCATCCCACGCCACGCTGCCACTCAATGCTTCGTTCACCGCTTCCGGCAGAACGCCGGTTTTCGCCGGTTGCCAGTTACCGTTGAGGTTTACCGCTACCTGGTAGGCTTTTGCCCCTTCTTTGGTGGAAAAATCCACGTTCAACGGCTGATTAAACCAGCTTGCTGTCAGTgg                                                                                                       >  1:656543/1‑232 (MQ=255)                                                                                                           cGTTCAGCTCTATGTTATAGGTCGCACCAGCATGATAAGGCAGATCAATGCCCACTTTACCATCCCACGCCACGCTGCCACTCAATGCTTCGTTCACCGCTTCCGGCAGAACGCCGGTTTTCGCCGGTTGCCAGTTACCGTTGAGGTTTACCGCTACCTGGTAGGCTTTTGCCCCTTCTTTGGTGGAAAAATCCACGTTCAACGGCTGATTAAACCAGCTTGCTGTCAGTgg                                                                                                       >  2:546893/1‑232 (MQ=255)                                                                                                                     tATGTTATAGGTCGCACCAGCATGATAAGGCAGATCAATGCCCACTTTACCATCCCACGCCACGCTGCCACTCAATGCTTCGTTCACCGCTTCCGGCAGAACGCCGGTTTTCGCCGGTTGCCAGTTACCGTTGAGGTTTACCGCTACCTGGTAGGCTTTTGCCCCTTCTTTGGTGGAAAAATCCACGTTCAACGGCTGATTAAACCAGCTTGCTGTCAGTGGTTCACTTTGCAg                                                                                           >  1:651547/1‑234 (MQ=255)                                                                                                                      aatatgtaGGTCCCCCCAGCATGATAAGGCAGGTCAATGCCCACTTTACCATCCCACGCCACGCTGCCACTCAATGCTTCGTTCACCGCTTCCGGCAGAACGCCGGTTTTCGCCGGTTGCCAGTTACCGTTGAGGTTTACCGCTACCTGGTAGGCTTTTGCCCCTTCTTTGGTGGAAAAATCCACGTTCAACGGCTGATTAAACCAGCTTGCTGTCAGTGGTTCACTTTGCAGAt                                                                                         <  1:199840/229‑1 (MQ=255)                                                                                                                            taGGTCGCACCAGCATGATAAGGCAGATCAATGCCCACTTTACCATCCCACGCCACGCTGCCACTCAATGCTTCGTTCACCGCTTCCGGCAGAACGCCGGTTTTCGCCGGTTGCCAGTTACCGTTGAGGTTTACCGCTACCTGGTAGGCTTTTGCCCCTTCTTTGGTGGAAAAATCCACGTTCAACGGCTGATTAAACCAGCTTGCTGTCAGTGGTTCACTTTGCAGATCGCTAtt                                                                                  >  2:145287/1‑236 (MQ=255)                                                                                                                                tCGCACCAGCATGATAAGGCAGATCAATGCCCACTTTACCATCCCACGCCACGCTGCCACTCAATGCTTCGTTCACCGCTTCCGGCAGAACGCCGGTTTTCGCCGGTTGCCAGTTACCGTTGAGGTTTACCGCTACCTGGTAGGCTTTTGCCCCTTCTTTGGTGGAAAAATCCACGTTCAACGGCTGATTAAACCAGCTTGCTGTCAGTGGTTCACTTTGCAGATCGCTATTGATa                                                                              <  2:651547/236‑1 (MQ=255)                                                                                                                                 cGCACCAGCATGATAAGGCAGATCAATGCCCACTTTACCATCCCACGCCACGCTGCCACTCAATGCTTCGTTCACCGCTTCCGGCAGAACGCCGGTTTTCGCCGGTTGCCAGTTACCGTTGAGGTTTACCGCTACCTGGTAGGCTTTTGCCCCTTCTTTGGTGGAAAAATCCACGTTCAACGGCTGATTAAACCAGCTTGCTGTCAGTGGTTCACTTTGCAGATCGCTATTGAt                                                                               >  2:163229/1‑234 (MQ=255)                                                                                                                                 cGCACCAGCATGATAAGGCAGATCAATGCCCACTTTACCATCCCACGCCACGCTGCCACTCAATGCTTCGTTCACCGCTTCCGGCAGAACGCCGGTTTTCGCCGGTTGCCAGTTACCGTTGAGGTTTACCGCTACCTGGTAGGCTTTTGCCCCTTCTTTGGTGGAAAAATCCACGTTCAACGGCTGATTAAACCAGCTTGCTGTCAGTGGTTCACTTTGCAGATCGCTATTGAt                                                                               >  1:262678/1‑234 (MQ=255)                                                                                                                                 cGCACCAGCATGATAAGGCAGATCAATGCCCACTTTACCATCCCACGCCACGCTGCCACTCAATGCTTCGTTCACCGCTTCCGGCAGAACGCCGGTTTTCGCCGGTTGCCAGTTACCGTTGAGGTTTACCGCTACCTGGTAGGCTTTTGCCCCTTCTTTGGTGGAAAAATCCACGTTCAACGGCTGATTAAACCAGCTTGCTGTCAGTGGTTCACTTTGCAGATCGCTATTGAt                                                                               >  1:269443/1‑234 (MQ=255)                                                                                                                                   cACCAGCATGATAAGGCAGATCAATGCCCACTTTACCATCCCACGCCACGCTGCCACTCAATGCTTCGTTCACCGCTTCCGGCAGAACGCCGGTTTTCGCCGGTTGCCAGTTACCGTTGAGGTTTACCGCTACCTGGTAGGCTTTTGCCCCTTCTTTGGTGGAAAAATCCACGTTCAACGGCTGATTAAACCAGCTTGCTGTCAGTGGt                                                                                                      >  1:269156/1‑209 (MQ=255)                                                                                                                                   cACCAGCATGATAAGGCAGATCAATGCCCACTTTACCATCCCACGCCACGCTGCCACTCAATGCTTCGTTCACCGCTTCCGGCAGAACGCCGGTTTTCGCCGGTTGCCAGTTACCGTTGAGGTTTACCGCTACCTGGTAGGCTTTTGCCCCTTCTTTGGTGGAAAAATCCACGTTCAACGGCTGATTAAACCAGCTTGCTGTCAGTGGt                                                                                                      <  2:269156/209‑1 (MQ=255)                                                                                                                                   cACCAGCATGATAAGGCAGATCAATGCCCACTTTACCATCCCACGCCACGCTGCCACTCAATGCTTCGTTCACCGCTTCCGGCAGAACGCCGGTTTTCGCCGGTTGCCAGTTACCGTTGAGGTTTACCGCTACCTGGTAGGCTTTTGCCCCTTCTTTGGTGGAAAAATCCACGTTCAACGGCTGATTAAACCAGCTTGCTGTCAGTGGTTCACTTTGCAGATCGCTATTGAt                                                                               >  2:436375/1‑232 (MQ=255)                                                                                                                                   cACCAGCATGATAAGGCAGATCAATGCCCACTTTACCATCCCACGCCACGCTGCCACTCAATGCTTCGTTCACCACTTCCGGCAGAACGCCGGTTTTCGCCGGTTGCCAGTTACCGTTGAGGTTTACCGCTACCTGGTAGGCTTTTGCCCCTTCTTTGGTCGAAAAATCTACGCTCAACGGCCGCTTAAACCAGCTTTCTGTCCGTGGTTCACTTTGCAGaatcctatctac                                                                               >  2:359224/1‑221 (MQ=255)                                                                                                                                                 ggCAGATCAATGCCCACTTTACCATCCCACGCCACGCTGCCACTCAATGCTTCGTTCACCGCTTCCGGCAGAACGCCGGTTTTCGCCGGTTGCCAGTTACCGTTGAGGTTTACCGCTACCTGGTAGGCTTTTGCCCCTTCTTTGGTGGAAAAATCCACGTTCAACGGCTGATTAAACCAGCTTGCTGTCAGTGGTTCACTTTGCAGATCGCTATTGATAAAGCTGAATTTACCGc                                                              <  1:365933/235‑1 (MQ=255)                                                                                                                                                      aTCAATGCCCACTTTACCATCCCACGCCACGCTGCCACTCAATGCTTCGTTCACCGCTTCCGGCAGAACGCCGGTTTTCGCCGGTTGCCAGTTACCGTTGAGGTTTACCGCTACCTGGTAGGCTTTTGCCCCTTCTTTGGTGGAAAAATCCACGTTCAACGGCTGATTAAACCAGCTTGCTGTCAGTGGTTCACTTTGCAGATCGCTATTGATAAAGCTGAATTTACCGCTCAAAt                                                        >  1:488436/1‑236 (MQ=255)                                                                                                                                                      aTCAATGCCCACTTTACCATCCCACGCCACGCTGCCACTCAATGCTTCGTTCACCGCTTCCGGCAGAACGCCGGTTTTCGCCGGTTGCCAGTTACCGTTGAGGTTTACCGCTACCTGGTAGGCTTTTGCCCCTTCTTTGGTGGAAAAATCCACGTTCAACGGCTGATTAAACCAGCTTGCTGTCAGTGGTTCACTTTGCAGATCGCTATTGATAAAGCTGAATTTACCGCTCAAAt                                                        >  1:273736/1‑236 (MQ=255)                                                                                                                                                      aTCAATGCCCACTTTACCATCCCACGCCACGCTGCCACTCAATGCTTCGTTCACCGCTTCCGGCAGAACGCCGGTTTTCGCCGGTTGCCAGTTACCGTTGAGGTTTACCGCTACCTGGTAGGCTTTTGCCCCTTCTTTGGTGGAAAAATCCACGTTCAACGGCTGATTAAACCAGCTTGCTGTCAGTGGTTCACTTTGCAGATCGCTATTGATAAAGCTGAATTTACCGCTCAAAt                                                        >  2:656343/1‑236 (MQ=255)                                                                                                                                                      aTCAATGCCCACTTTACCATCCCACGCCACGCTGCCACTCAATGCTTCGTTCACCGCTTCCGGCAGAACGCCGGTTTTCGCCGGTTGCCAGTTACCGTTGAGGTTTACCGCTACCTGGTAGGCTTTTGCCCCTTCTTTGGTGGAAAAATCCACGTTCAACGGCTGATTAAACCAGCTTGCTGTCAGTGGTTCACTTTGCAGATCGCAATTGATAAAGCTGAATTTACCGCTCAAAt                                                        >  2:190065/1‑236 (MQ=255)                                                                                                                                                          aTGCCCACTTTACCATCCCACGCCACGCTGCCACTCAATGCTTCGTTCACCGCTTCCGGCAGAACGCCGGTTTTCGCCGGTTGCCAGTTACCGTTGAGGTTTACCGCTACCTGGTAGGCTTTTGCCCCTTCTTTGGTGGAAAAATCCACGTTCAACGGCTGATTAAACCAGCTTGCTGTCAGTGGTTCACTTTGCAGATCGCTATTGATAAAGCTGAATTTACCGCTCAAAttttt                                                    <  1:546893/236‑1 (MQ=255)                                                                                                                                                           tGCCCACTTTACCATCCCACGCCACGCTGCCACTCAATGCTTCGTTCACCGCTTCCGGCAGAACGCCGGTTTTCGCCGGTTGCCAGTTACCGTTGAGGTTTACCGCTACCTGGTAGGCTTTTGCCCCTTCTTTGGTGGAAAAATCCACGTTCAACGGCTGATTAAACCAGCTTGCTGTCAGTGGTTCACTTTGCAGATCGCTATTGTTAAAACTGAATTTACCGCTCAAATTTTTc                                                   >  2:328399/1‑236 (MQ=255)                                                                                                                                                            gCCCACTTTACCATCCCACGCCACGCTGCCACTCAATGCTTCGTTCACCGCTTCCGGCAGAACGCCGGTTTTCGCCGGTTGCCAGTTACCGTTGAGGTTTACCGCTACCTGGTAGGCTTTTGCCCCTTCTTTGGTGGAAAAATCCACGTTCAACGGCTGATTAAACCAGCTTGCTGt                                                                                                             <  1:350737/177‑1 (MQ=255)                                                                                                                                                            gCCCACTTTACCATCCCACGCCACGCTGCCACTCAATGCTTCGTTCACCGCTTCCGGCAGAACGCCGGTTTTCGCCGGTTGCCAGTTACCGTTGAGGTTTACCGCTACCTGGTAGGCTTTTGCCCCTTCTTTGGTGGAAAAATCCACGTTCAACGGCTGATTAAACCAGCTTGCTGt                                                                                                             >  2:350737/1‑177 (MQ=255)                                                                                                                                                                aCTTTACCATCCCACGCCACGCTGCCACTCAATGCTTCGTTCACCGCTTCCGGCAGAACGCCGGTTTTCGCCGGTTGCCAGTTACCGTTGAGGTTTACCGCTACCTGGTAGGCTTTTGCCCCTTCTTTGGTGGAAAAATCCACGTTCAACGGCTGATTAAACAAGCTTGCTGTCAGTGGTTCACTTTGCAGATAGCTATTGATAAAGCTGAATTTACCGCTCAAATTTTTCat                                                 >  1:383911/1‑232 (MQ=255)                                                                                                                                                                           ccacgccccgCTGCCACTCAATGCTTCGTTCACCGCTTCCGGCAGAACGCCGGTTTTCGCCGGTTGCCAGTTACCGTTGAGGTTTACCGCTACCTGGTAGGCTTTTGCCCCTTCTTTGGTGGAAAAATCCACGTTCAACGGCTGATTAAACCAGCTTGCTGTCAGTGGTTCACTTTGCAGATCGCTATTGATAAAGCTGAATTTACCGCTCAAATTTTTCAGGGTGCTGTCGAGTg                                   <  1:306947/236‑1 (MQ=255)                                                                                                                                                                            cacgccacgcTGCCACTCAATGCTTCGTTCACCGCTTCCGGCAGAACGCCGGTTTTCGCCGGTTGCCAGTTACCGTTGAGGTTTACCGCTACCTGGTAGGCTTTTGCCCCTTCTTTGGTGGAAAAATCCACGTTCAACGGCTGATTAAACCAGCTTGCTGTCAGTGGTTCACTTTGCAGATCGCTATTGATAAAGCTGAATTTACCGCTCAAATTTTTCAGGGTGCTGTCGAGTgg                                  >  2:508173/1‑236 (MQ=255)                                                                                                                                                                              cgccacgcTGCCACTCAATGCTTCGTTCACCGCTTCCGGCAGAACGCCGGTTTTCGCCGGTTGCCAGTTACCGTTGAGGTTTACCGCTACCTGGTAGGCTTTTGCCCCTTCTTTGGTGGAAAAATCCACGTTCAACGGCTGATTAAACCAGCTTGCTGTCAGTGGTTCACTTTGCAGATCGCTATTGATAAAGCTGAATTTACCGCTCAAAGTTTTAAGGGAGCTTTCGAGTGGtt                                >  2:514300/1‑236 (MQ=255)                                                                                                                                                                               gccacgcTGCCACTCAATGCTTCGTTCACCGCTTCCGGCAGAACGCCGGTTTTCGCCGGTTGCCAGTTACCGTTGAGGTTTACCGCTACCTGGTAGGCTTTTGCCCCTTCTTTGGTGGAAAAATCCACGTTCAACGGCTGATTAAACCAGCTTGCTGTCAGTGGTTCACTTTGCAGATCGCTATTGATAAAGCTGAATTTACCGCTCAAATTTTTCAGGGTGCTGTCGAGTGGttt                               <  2:492865/236‑1 (MQ=255)                                                                                                                                                                                     cTGCCACTCAATGCTTCGTTCACCGCTTCCGGCAGAACGCCGGTTTTCGCCGGTTGCCAGTTACCGTTGAGGTTTACCGCTACCTGGTAGGCTTTTGCCCCTTCTTTGGTGGAAAAATCCACGTTCAACGGCTGATTAAACCAGCTTGCTGTCAGTGGTTCACTTTGCAGATCGCTATTGATAAAGCTGAATTTACCGCTCAAATTTTTCAGGGTGCTGTCGAGTGGTTTGATaaa                         <  1:145287/236‑1 (MQ=255)                                                                                                                                                                                     cTGCCACTCAATGCTTCGTTCACCGCTTCCGGCAGAACGCCGGTTTTCGCCGGTTGCCAGTTACCGTTGAGGTTTACCGCTACCTGGTAGGCTTTTGCCCCTTCTTTGGTGGAAAAATCCACGTTCAACGGCTGATTAAACCAGCTTGCTGTCAGTGGTTCACTTTGCAGATCGCTATTGATAAAGCTGAATTTACCGCTCAAATTTTTCAGGGTGCTGTCGAGTGGTTTGATaaa                         >  1:9841/1‑236 (MQ=255)                                                                                                                                                                                     cTGCCACTCAATGCTTCGTTCACCGCTTCCGGCAGAACGCCGGTTTTCGCCGGTTGCCAGTTACCGTTGAGGTTTACCGCTACCTGGTAGGCTTTTGCCCCTTCTTTGGTGGAAAAATCCACGTTCAACGGCTGATTAAACCAGCTTGCTGTCAGTGGTTCACTTTGCAGATCGCTATTGATAAAGCTGAATTTACCGCTCAAATTTTTCAGGGTGCTGTCGAGTGGTTTGATaaa                         <  1:190065/236‑1 (MQ=255)                                                                                                                                                                                       ggcACTCAATGCTTCGTTCACCGCTTCCGGCAGAACGCCGGTTTTCGGCGGTTGCCAGTTACCGTTGAGGTTTACCGCTGCCTGGTAGGCTTTTGCCCCTTCTTTGGTGGAAAAATCCACGTTCAACGGCTGATTAAACCAGCTTGCTGTCAGTGGTTCACTTTGCAGATCGCTATTGATAAAGCTGAATTTACCGCTCAAATTTTTCAGGGTGCTGTCGAGTGGTTTGATAAACa                       <  1:359316/234‑1 (MQ=255)                                                                                                                                                                                         cACTCAATGCTTCGTTCACCGCTTCCGGCAGAACGCCGGTTTTCGCCGGTTGCCAGTTACCGTTGAGGTTTACCGCTACCTGGTAGGCTTTTGCCCCTTCTTTGGTGGAAAAATCCACGTTCAACGGCTGATTAAACCAGCTTGCTGTCAGTGGTTCACTTTGCAGATCGCTATTGATAAAGCTGAATTTACCGCTCAAATTTTTCAGGGTGCTGTCGAGTGGTTTGATAAACAGa                     <  2:273736/236‑1 (MQ=255)                                                                                                                                                                                          aCTCAATGCTTCGTTCACCGCTTCCGGCAGAACGCCGGTTTTCGCCGGTTGCCAGTTACCGTTGAGGTTTACCGCTACCTGGTAGGCTTTTGCCCCTTCTTTGGTGGAAAAATCCACGTTCAACGGCTGATTAAACCAGCTTGCTGTCAGTGGTTCACTTTGCAGATCGCTATTGATAAAGCTGAATTTACCGCTCAAATTTTTCAGGGTGCTGTCGAGTGGTTTGATAAACAGAc                    <  1:508173/236‑1 (MQ=255)                                                                                                                                                                                                tGCTTCGTTCACCGCTTCCGGCAGAACGCCGGTTTTCGCCGGTTGCCAGTTACCGTTGAGGTTTACCGCTACCTGGTAGGCTTTTGCCCCTTCTTTGGTGGAAAAATCCACGTTCAACGGCTGATTAAACCAGCTTGCTGTCAGTGGTTCACTTTGCAGATCGCTATTGATAAAGCTGAATTTACCGCTCAAATTTTTCAGGGTGCTGTCGAGTGGTTTGATAAACAGACTGttat              >  2:20903/1‑236 (MQ=255)                                                                                                                                                                                                  cTTCGTTCACCGCTTCCGGCAGAACGCCGGTTTTCGCCGGTTGCCAGTTACCGTTg                                                                                                                                                                                                <  1:602041/56‑1 (MQ=255)                                                                                                                                                                                                  cTTCGTTCACCGCTTCCGGCAGAACGCCGGTTTTCGCCGGTTGCCAGTTACCGTTg                                                                                                                                                                                                >  2:602041/1‑56 (MQ=255)                                                                                                                                                                                                    tCGTTCACCGCTTCCGGCAGAACGCCGGTTTTCGCCGGTTGCCAGTTACCGTTGAGGTTTACCGCTACCTGGTAGGCTTTTGCCCCTTCTTTGGTGGAAAAATCCACGTTCAACGGCTGATTAAACCAGCTTGCTGTCAGTGGTTCACTTTGCAGATCGCTATTGATAAAGCTGAATTTACCGCTCAAATTTTTCa                                                  <  2:414936/196‑1 (MQ=255)                                                                                                                                                                                                    tCGTTCACCGCTTCCGGCAGAACGCCGGTTTTCGCCGGTTGCCAGTTACCGTTGAGGTTTACCGCTACCTGGTAGGCTTTTGCCCCTTCTTTGGTGGAAAAATCCACGTTCAACGGCTGATTAAACCAGCTTGCTGTCAGTGGTTCACTTTGCAGATCGCTATTGATAAAGCTGAATTTACCGCTCAAATTTTTCa                                                  >  1:414936/1‑196 (MQ=255)                                                                                                                                                                                                          aCCGCTTCCGGCAGAACGCCGGTTTTCGCCGGTTGCCAGTTACCGTTGAGGTTTACCGCTACCTGGTAGGCTTTTGCCCCTTCTTTGGTGGAAAAATCCACGTTCAACGGCTGATTAAACCAGCTTGCTGTCAGTGGTTCACTTTGCAGATCGCTATTGATAAAGCTGAATTTACCGCTCAAATTTTTCAGGGTGCTGTCGAGTGGTTTGATAAACAGACTGTTATTACGCAGc      >  1:40529/1‑234 (MQ=255)                                                                                                                                                                                                             gCTTCCGGCAGAACGCCGGTTTTCGCCGGTTGCCAGTTACCGTTGAGGTTTACCGCTACCTGGTAGGCTTTTGCCCCTTCTTTGGTGGAAAAATCCACGTTCAACGGCTGATTAAACCAGCTTGCTGTCAGTGGTTCACTTTGCAGATCGCTATTGATAAAGCTGAATTTACCGCTCAAATTTTTCAGGGTGCTGTCGAGTGGTTTGATAAACAGACTGTTATTACGCAGCGTCa  >  1:72427/1‑235 (MQ=255)                                                                                                                                                                                                                  |                                                                                                                                                                                                                                      TCAAAGCTGTTGAGATTGCCATCAACCTTAACGTTTACCGCTAGTGGTTCACCCGCAGGTTTGGCTAACGGTGAAGGTAAGTGACTGCTCACATTCTTTAGATCGCCGTTCAGCTCTATGTTATAGGTCGCACCAGCATGATAAGGCAGATCAATGCCCACTTTACCATCCCACGCCACGCTGCCACTCAATGCTTCGTTCACCGCTTCAGGCAGAACGCCGGTTTTCGCCGGTTGCCAGTTACCGTTGAGGTTTACCGCTACCTGGTAGGCTTTTGCCCCTTCTTTGGTGGAAAAATCCACGTTCAACGGCTGATTAAACCAGCTTGCTGTCAGTGGTTCACTTTGCAGATCGCTATTGATAAAGCTGAATTTACCGCTCAAATTTTTCAGGGTGCTGTCGAGTGGTTTGATAAACAGACTGTTATTACGCAGCGTCA  >  NC_000913/3393776‑3394214

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑