| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,399,779 | A→C | L67R (CTG→CGG) | mreC ← | cell wall structural complex MreBCD transmembrane component MreC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,399,779 | 0 | A | C | 98.7% | 256.8 / NA | 78 | L67R (CTG→CGG) | mreC | cell wall structural complex MreBCD transmembrane component MreC |
| Reads supporting (aligned to +/- strand): ref base A (0/1); new base C (36/41); total (36/42) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01 | |||||||||||
CGCCATTAACGCTACCTTTATCGATAACAACTTGATCGCTATAAGGATCGTTAACCGTGGAGATAACCTGAGTCACCATTTTCTGCTCATCCTGACGCAGCGGGGAACCCAGCAGCTCGCGCAGACGCGCGTTCTCCTGTTTGTATTGTCCAAGCATCAGCAGTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCAGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCATATAAGTACGGATTTGACTGAACGTCCCCAGGCGGCTGTCGGCAATAATAATGCCGAGCGCCACCAGCACCGCCAGAATAAGGCGAATCTGTAGCGACGGGCCACGGCTAAAAATTGGCTTCATAAGTTATGCGTATTCTCGTATCAGACCAG > NC_000913/3399546‑3400007 | cGCCAATAACGCTACCTTTAACGATAACAACTTGATCGCTATAAGGATCGTTAACCGTGGAGATAACCTGAGTCACCATTTTCTGCTCATCCTGACGCAGCGGGGAACCCAGCAGCTCGCGCAGACGCGCGTTCTCCTGTTTGTATTGTCCAAGCATCAGCAGTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGc < 2:376361/236‑1 (MQ=255) ccATTAACGCTACCTTTATCGATAACAACTTGATCGCTATAAGGATCGTTAACCGTGGAGATAACCTGAGTCACCATTTTCTGCTCATCCTGACGCAGCGGGGAACCCAGCAGCTCGCGCAGACGCGCGTTCTCCTGTTTGTATTGTCCAAGCATCAGCAGTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGt < 2:630856/236‑1 (MQ=255) tAACGCTACCTTTATCGATACCAACTTGATCGCTATAAGTATCGTTAACCGTGGAGATAGCCTGAGTCCCCATTTTCTGCTCATCCTGACGCAGCGGGGAACCCAGCAGCTCGCGCAGACGCGCGTTCTCCTGTTTGTATTGTCCAAGCATCAGCAGTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGt < 1:252635/232‑1 (MQ=255) tATCGATAACAACTTGATCGCTATAAGGATCGTTAACCGTGGAGATAACCTGAGTCACCATTTTCTGCTCATCCTGACGCAGCGGGGAACCCAGCAGCTCGCGCAGACGCGCGTTCTCCTGTTTGTATTGTCCAAGCATCAGCAGTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATcc > 2:513382/1‑236 (MQ=255) aacaacTTGATCGCTATAAGGATCGTTAACCGTGGAGATAACCTGAGTCACCATTTTCTGCTCATCCTGACGCAGCGGGGAACCCAGCAGCTCGCGCAGACGCGCGTTCTCCTGTTTGTATTGTCCAAGCATCAGCAGTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAAtt > 1:41057/1‑236 (MQ=255) gcttgCTATAAGGATCGTTAACCGGGGAAATAACCTGAGTCACCATTTTCTGCTCATCCTGACGCAGCGGGGAACCCAGCAGCTCGCGCAGACGCGCGTTCTCCTGTTTGTATTGTCCAAGCATCAGCAGTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACgagga < 2:184341/232‑1 (MQ=255) tCGCTATAAGGATCGTTAACCGTGGAGATAACCTGAGTCACCATTTTCTGCTCATCCTGACGCAGCGGGGAACCCAGCAGCTCGCGCAGACGCGCGTTCTCCTGTTTGTATTGTCCAAGCATCAGCAGTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTTTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTAACTAGGAGc > 2:483322/1‑236 (MQ=255) cTATAAGGATCGTTAACCGTGGAGATAACCTGAGTCACCATTTTCTGCTCATCCTGACGCAGCGGGGAACCCAGCAGCTCGCGCAGACGCGCGTTCTCCTGTTTGTATTGTCCAAGCATCAGCAGTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCAtt > 1:103083/1‑236 (MQ=255) cTATAAGGATCGTTAACCGTGGAGATAACCTGAGTCACCATTTTCTGCTCATCCTGACGCAGCGGGGAACCCAGCAGCTCGCGCAGACGCGCGTTCTCCTGTTTGTATTGTCCAAGCATCAGCAGTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCAtt < 2:265745/236‑1 (MQ=255) taAGGATCGTTAACCGTGGAGATAACCTGAGTCACCATTTTCTGCTCATCCTGACGCAGCGGGGAACCCAGCAGCTCGCGCAGACGCGCGTTCTCCTGTTTGTATTGTCCAAGCATCAGCAGTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTggc > 1:734453/1‑235 (MQ=255) taAGGATCGTTAACCGTGGAGATAACCTGAGTCACCATTTTCTGCTCATCCTGACGCAGCGGGGAACCCAGCAGCTCGCGCAGACGCGCGTTCTCCTGTTTGTATTGTCCAAGCATCAGCAGTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGa > 2:624449/1‑236 (MQ=255) gTTAACCGTGGAGATACCCTGAGTCACCATTTTCCTCTCATCCTGACGCAGCGGGGACCCCAGCAGCTCGCGCAGACGCGCGTTCTCCTGTTTGTATTGTCCAAGCATCAGCAGTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACaaa < 2:481104/234‑1 (MQ=255) gTTAACCGTGGAGATAACCTGAGTCACCATTTTCTGCTCATCCTGACGCAGCGGGGAACCCAGCAGCTCGCGCAGACGCGCGTTCTCCTGTTTGTATTGTCCAAGCATCAGCAGTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACgagga > 2:557224/1‑220 (MQ=255) gTTAACCGTGGAGATAACCTGAGTCACCATTTTCTGCTCATCCTGACGCAGCGGGGAACCCAGCAGCTCGCGCAGACGCGCGTTCTCCTGTTTGTATTGTCCAAGCATCAGCAGTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACgagga < 1:557224/220‑1 (MQ=255) gTTAACCGTGGAGATAACCTGAGTCACCATTTTCTGCTCATCCTGACGCAGCGGGGAACCCAGCAGCTCGCGCAGACGCGCGTTCTCCTGTTTGTATTGTCCAAGCATCAGCAGTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTTGAAACaaatc > 2:577652/1‑234 (MQ=255) gTTAACCGTGGAGATAACCTGAGTCACCATTTTCTGCTCATCCTGACGCAGCGGGGAACCCAGCAGCTCGCGCAGACGCGCGTTCTCCTGTTTGTATTGTCCAAGCATCAGCAGTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACaaa < 2:327706/234‑1 (MQ=255) gTTAACCGTGGAGATAACCTGAGTCACCATTTTCTGCTCATCCTGACGCAGCGGGGAACCCAGCAGCTCGCGCAGACGCGCGTTCTCCTGTTTGTATTGTCCAAGCATCAGCAGTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGt > 2:619394/1‑236 (MQ=255) gTTAACCGTGGAGATAACCTGAGTCACCATTTTCTGCTCATCCTGACGCAGCGGGGAACCCAGCAGCTCGCGCAGACGCGCGTTCTCCTGTTTGTATTGTCCAAGCATCAGCAGTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGt > 2:45673/1‑236 (MQ=255) gTTAACCGTGGAGATAACCTGAGTCACCATTTTCTGCTCATCCTGACGCAGCGGGGAACCCAGCAGCTCGCGCAGACGCGCGTTCTCCTGTTTGTATTGTCCAAGCATCAGCAGTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGt > 1:481104/1‑236 (MQ=255) gTTAACCGTGGAGATAACCTGAGTCACCATTTTCTGCTCATCCTGACGCAGCGGGGAACCCAGCAGCTCGCGCAGACGCGCGTTCTCCTGTTTGTATTGTCCAAGCATCAGCAGTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGt > 1:22258/1‑236 (MQ=255) gTTAACCGTGGAGATAACCTGAGTCACCATTTTCTGCTCATCCTGACGCAGCGGGGAACCCAGCAGCTCGCGCAGACGCGCGTTCTCCTGTTTGTATTGTCCAAGCATCAGCAGTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGCTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCACTGGAAACAAAGt > 1:506129/1‑236 (MQ=255) cGTGGAGATAACCTGAGTCACCATTTTCTGCTCATCCTGACGCAGCGGGGAACCCAGCAGCTCGCGCAGACGCGCGTTCTCCTGTTTGTATTGTCCAAGCATCAGCAGTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAg > 2:504592/1‑236 (MQ=255) gagaTAACCTGAGTCACCATTTTCTGCTCATCCTGACGCAGCGGGGAACCCAGCAGCTCGCGCAGACGCGCGTTCTCCTGTTTGTATTGTCCAAGCATCAGCAGTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACt > 1:278491/1‑236 (MQ=255) agaTAACCTGAGTCACCATTTTCTGCTCATCCTGACGCAGCGGGGAACCCAGCAGCTCGCGCAGACGCGCGTTCTCCTGTTTGTATTGTCCAAGCATCAGCAGTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTg < 1:583639/236‑1 (MQ=255) ccTGATTCACCATTTGCTGCTCATCCTGACGCAGCGGTGAACCCAGCAGCTCGCGCAGACGCGCGTTCTCCTGTTTGTATTGTCCAAGCATCAGCAGTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGAcggcg < 2:18199/236‑1 (MQ=255) ccTGAGTCACCATTTTCTGCTCATCCTGACGCAGCGGGGAACCCAGCAGCTCGCGCAGACGCGCGTTCTCCTGTTTGTATTGTCCAAGCATCAGCAGTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGAcggcg < 1:513382/236‑1 (MQ=255) ccTGAGTCACCATTTTCTGCTCATCCTGACGCAGCGGGGAACCCAGCAGCTCGCGCAGACGCGCGTTCTCCTGTTTGTATTGTCCAAGCATCAGCAGTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGAcggcg < 2:41057/236‑1 (MQ=255) ccTGAGTCACCATTTTCTGCTCATCCTGACGCAGCGGGGAACCCAGCAGCTCGCGCAGACGCGCGTTCTCCTGTTTGTATTGTCCAAGCATCAGCAGTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGAcggcg < 1:619394/236‑1 (MQ=255) tGAGTCACCATTTTCTGCTCATCCTGACGCAGCGGGGAACCCAGCAGCTCGCGCAGACGCGCGTTCTCCTGTTTGTATTGTCCAAGCATCAGCAGTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGACGGCGGt < 1:561191/236‑1 (MQ=255) tGAGTCACCATTTTCTGCTCATCCTGACGCAGCGGGGAACCCAGCAGCTCGCGCAGACGCGCGTTCTCCTGTTTGTAGTGTCCAAGCATCAGCAGTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGACGGCGGt < 1:25548/236‑1 (MQ=255) gTCACCATTTTCTGCTCATCCTGACGCAGCGGGGAACCCAGCAGCTCGCGCAGACGCGCGTTCTCCTGTTTGTATTGTCCAAGCATCAGCAGTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTATc < 1:45673/236‑1 (MQ=255) cATTTTCTGCTCATCCTGACGCAGGGGGGAACCCAGCAGCTCGCGCAGCCGCGCGTTCTCCTGTTTGTATTGTCCAAGCATCAGCAGTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCatat < 1:687411/236‑1 (MQ=255) cATTTTCTGCTCATCCTGACGCAGCGGGGAACCCAGCAGCTCGCGCAGACGCGCGTTCTCCTGTTTGTATTGTCCAAGCATCAGCAGTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCatat < 1:504592/236‑1 (MQ=255) tCTGCTCATCCGAACGCAGCGGGGAACCCAGCATCTCGCGCAGACGCGCGTTCTCCTGTTTGTATTGTCCAAGCATCAGCAGTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCATATAAGTa < 1:380759/236‑1 (MQ=255) gCTCATCCTGACGCAGCGGGGAACCCAGCAGCTCGCGCAGACGCGCGTTCTCCTGTTTGTATTGTCCAAGCATCAGCAGTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCATATAAGt < 2:726007/232‑1 (MQ=255) gCTCATCCTGACGCAGCGGGGAACCCAGCAGCTCGCGCAGACGCGCGTTCTCCTGTTTGTATTGTCCAAGCATCAGCAGTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCATATAAGt > 1:726007/1‑232 (MQ=255) cTCATCCTGACGCAGCGGGGAACCCAGCAGCTCGCGCAGACGCGCGTTCTCCTGTTTGTATTGTCCAAGCATCAGCAGTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCATATAAGTACGGa < 1:624449/236‑1 (MQ=255) cTCATCCTGACGCAGCGGGGAACCCAGCAGCTCGCGCAGACGCGCGTTCTCCTGTTTGTATTGTCCAAGCATCAGCAGTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCATATAAGTACGGa > 2:266398/1‑236 (MQ=255) cTGACGCAGCGGGGAACCCAGCAGCTCGCGCAGACGCGCGTTCTCCTGTTTGTATTGTCCAAGCATCAGCAGTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCATATAAGTACGGATTTGAc < 2:103083/236‑1 (MQ=255) agCAGCGGGAAACCCAGCAGCTCGCGAAGACGCGCGTTCTCCTTGTTGTATTGTCCAAGCATCAGCAGTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCATATAAGTACGGATTTGACTGaa < 1:311332/235‑1 (MQ=255) cGGGGAACCCAGCAGCTCGCGCAGACGCGCGTTCTCCTGTTTGTATTGTCCAAGCATCAGCAGTTCCATGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCa < 1:551699/209‑1 (MQ=255) cGGGGAACCCAGCAGCTCGCGCAGACGCGCGTTCTCCTGTTTGTATTGTCCAAGCATCAGCAGTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCa > 2:551699/1‑209 (MQ=255) cGGGGAACCCAGCAGCTCGCGCAGACGCGCGTTCTCCTGTTTGTATTGTCCAAGCATCAGCAGTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCATATAAGt > 2:32517/1‑216 (MQ=255) cGGGGAACCCAGCAGCTCGCGCAGACGCGCGTTCTCCTGTTTGTATTGTCCAAGCATCAGCAGTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCATATAAGt < 1:32517/216‑1 (MQ=255) gAACCCAGCAGCTCGCGCAGACGCGCGTTCTCCTGTTTGTATTGTCCAAGCATCAGCAGTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCATATAAGTACGGATTTGACTGAACGTCCCCa < 1:577652/235‑1 (MQ=255) agcggcTCGCTCAGACGCGTGTTCGCCTGGTTGTATTGTCCAAGCATCAGCAGTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCATATAAGTACGGATTTGACTGAACGTCCCCAGGCGGCt < 2:734453/236‑1 (MQ=255) gcagcTCGCGCAGACGCGCGTTCTCCTGTTTGTATTGTCCAAGCATCAGCAGTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCATATAAGTACGGATTTGACTGAACGTCCCCAGGCGGCTg < 1:490363/236‑1 (MQ=255) gcTGGCGCAGCCGAGCGTTCTCCTGTTTGTATTGTCCAAGCATCAGCAGTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCATATAAGTACGGATTTGACTGAACGTCCCCAGGCGGCTGTCg < 2:436077/236‑1 (MQ=255) cTCGCGCAGACGCGCGTTCTCCTGTTTGTATTGTCCAAGCATCAGCAGTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCATATAAGTACGGATTTGACTGAACGTCCCCAGGCGGCTGTCgg > 2:371676/1‑236 (MQ=255) cgcAGACGCGGGTTCTCCTGTTTGTATTGTCCAAGCATCAGCAGTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCATATAAGTACGGATTTGACTGAACGTCCCCAGGCGGCTGTCGGCaa < 1:559343/235‑1 (MQ=255) cgcAGACGCGCGTTCTCCTGTTTGTATTGTCCAAGCATCAGCAGTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCATATAAGTACGGATTTGACTGAACGTCCCCAGGCGGCTGTCGGc < 1:371676/233‑1 (MQ=255) gcgTTCTCCTGTTTGTATTGTCCAAGCATCAGCAGTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCATATAAGTACGGATTTGACTGAACGTCCCCAGGCGGCTGTCGGCAATAATAATGc > 2:551286/1‑235 (MQ=255) tGTAGTGACCGAGCTGCAGCAGTCCACTGTTTTTCAGCAACAGGTCCTGGCGTAACGCCCGGTTTTCAAGTTCTAATTGGTTACGCGGGGCCAGCGTCTGAGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCAGATAAGTACGGATTTGACTGAACGTCCCCAGGCGGCTGTCGGCAATAATAATGCCGAGCGCCACCAGc < 2:281304/236‑1 (MQ=255) aTTGTCCAAGCATCAGCAGTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCATATAAGTACGGATTTGACTGAACGTCTCAAGGCGGCTGTCGGCAATAATAATGCCGAGCGCCACCAGGAcc > 2:467767/1‑236 (MQ=255) aTTGTCCAAGCATCAGCAGTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCATATAAGTACGGATTTGACTGAACGTCCCCAGGCGGCTGTCGGCAATAATAATGCCGAGCGCCACCAGCAcc > 1:765125/1‑236 (MQ=255) tCCAAGCATCAGCAGTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCATATAAGTACGGATTTGACTGAACGTCCCCAGGCGGCTGTCGGCAATAATAATGCCGAGCGCCACCAGCACAGCCa > 1:28806/1‑236 (MQ=255) gCATCAGCAGTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCATATAAGTACGGATTTGACTGAACGTCCCCAGGCGGCTGt < 1:235086/195‑1 (MQ=255) gCATCAGCAGTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCATATAAGTACGGATTTGACTGAACGTCCCCAGGCGGCTGt > 2:235086/1‑195 (MQ=255) tCAGCAGTTCACTTTTTTTCAGCAACAGTTCCTGCCGTAACGTCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCATATAAGTACGGATTTGACTGAACGTCCCCAGGCGGCTGTCGGc < 2:732990/196‑1 (MQ=255) agcagTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGACGGCGGt < 2:766592/146‑1 (MQ=255) agcagTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGACGGCGGt > 1:766592/1‑146 (MQ=255) agcagTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCATATAAGTACGGATTTGACTGAACGTCCCCAGGCGGCTGTCGGCAATAATAATGCCGAGCGACACCAGCACCGCCAGAATAAGGc > 1:671664/1‑235 (MQ=255) ttCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCATATAAGTACGGATTTGACTGAACGTCCCCAGGCGGCTGTCGGCaataata > 1:732990/1‑196 (MQ=255) ttCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCATATAAGTACGGATTTGACTGAACGTCCCCAGGCGGCTGTCGGCAATAATAATGCCGAGCGCCACCAGCACCGCCAGAATAAGGCGAATCt > 1:286927/1‑236 (MQ=255) tttttCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCATATAAGTACGGATTTGACTGAACGTCCCCAGGCGGCTGTCGGCAATAATAATGCCGAGCGCCACCAGCACCGCCAGAATAAGGCGAATCTGTAGCGa > 1:214092/1‑236 (MQ=255) tttgtCAGCCACAGTTCCTGACGTAGCGCCCGGTTTTCAAGTTCTAATTGATCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCATATAATTACGGATTTGACTGAACGTCCCCAGGCGGCTGTCGGCAATAATAATGCCGAGCGCCACCAGCACCGCCAGAATAAGGCGAATCTGTAGCGa < 2:214092/236‑1 (MQ=255) aGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCATATAAGTACGGATTTGACTGAACGTCCCCAGGCGGCTGTCGGCAATAATAATGCCGAGCGCCACCAGCACCGCCAGAATAAGGCGAATCTGTAGCGACGGGcc < 1:266398/236‑1 (MQ=255) aCAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCATATAAGTACGGATTTGACTGAACGTCCCCAGGCGGCTGTCGGCAATAATAATGCCGAGCGCCACCAGCACCGCCAGAATAAGGCGAATCTGTAGCGACGGGCCACgg > 1:68265/1‑236 (MQ=255) tGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCATATAAGTACGGATTTGACTGAACGTCCCCAGGCGGCTGTCGGc < 2:10052/164‑1 (MQ=255) tGACGTAACGCCCGGTTTGCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCAGCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCATATAAGTACGGATTTGACTGAACGTCCCCAGGCGGCTGTCGGCAATAATAATGCCGAGCGCCACCAGCACCGCCAGAATAAGGCGAATCTGTAGCGACGGGCCACGGCTaaaaa < 1:467767/235‑1 (MQ=255) aaCGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCATATAAGTACGGATTTGACTGAACGTCCCCAGGCGGCTGTCGGCCATAATAATGCCGAGCGACACCCGCAACGCGCGCATAAAGCCAATCTGTAGCGAATGGACACAGCGCACAATTGGCtt > 2:315051/1‑236 (MQ=255) gCCGGGTTTTCAAGTTCTAATTGGACACGCGAGGCCCGCTTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGACGGGGGTATCCATATAAGTACGGATTTGACTGAACGTCCCCAGGCGGCTGTCGGCAATAATAATGCCGGGCGCCACCAGCACCGCCAGAATAAGGCGAATCTGTAGCGACGGGCCACGGCTAAAAATTGGCTTCAt < 2:671664/236‑1 (MQ=255) gTTTTCAAGTTCTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCATATAAGTACGGATTTGACTGAACGTCCCCAGGCGGCTGTCGGCAATAATAATGCCGAGCGCCACCAGCACCGCCAGAATAAGGCGAATCTGTAGCGACGGGCCACGGCTAAAAATTGGCTTCATAAGt > 1:176245/1‑235 (MQ=255) cTAATTGGTCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCATATAAGTACGGATTTGACTGAACGTCCCCAGGCGGCTGTCGGCAATAATAATGCCGAGCGCCACCAGCACCGCCAGAATAAGGCGAATCTGTAGCGACGGGCCACGGCTAAAAATTGGCTTCATAAGTTATGCGGATtct > 1:684012/1‑236 (MQ=255) tCACGCGAGGCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCATATAAGTACGGATTTGACTGAACGTCCCCAGGCGGCTGTCGGCAATAATAATGCCGAGCGCCACCAGCACCGCCAGAATAAGGCGAATCTGTAGCGACGGGCCACGGCTAAAAATTGGCTTCATAAGTTATGCGTATTCTCGTATCAg > 1:485167/1‑236 (MQ=255) cgAGGCCCGAATCAGCGATCCGCCATCAAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGCCGGACGGCGGTATCCATATAAGTCCGGATTTGACTGAACGTCCCCAGGCGGCTGTCGGCAATAATAATGCCGAGCGCCACCAGCACCGCCAGAATAAGGCGAATCTGTAGCGACGGGCCACGGCTAAAAATTGGCTTCATAAGTTATGCGTATTCTCGTATCAGACcag < 2:684012/236‑1 (MQ=255) gCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCATATAAGTACGGATTTGACTGAACGTCCCCAGGCGGCTGTCGGCAATAATAATGCCGAGCGCCACCAGCACCGCCAGAATAAGGCGa < 1:429800/165‑1 (MQ=255) gCCCGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCATATAAGTACGGATTTGACTGAACGTCCCCAGGCGGCTGTCGGCAATAATAATGCCGAGCGCCACCAGCACCGCCAGAATAAGGCGa > 2:429800/1‑165 (MQ=255) | CGCCATTAACGCTACCTTTATCGATAACAACTTGATCGCTATAAGGATCGTTAACCGTGGAGATAACCTGAGTCACCATTTTCTGCTCATCCTGACGCAGCGGGGAACCCAGCAGCTCGCGCAGACGCGCGTTCTCCTGTTTGTATTGTCCAAGCATCAGCAGTTCACTGTTTTTCAGCAACAGTTCCTGACGTAACGCCCGGTTTTCAAGTTCTAATTGGTCACGCGAGGCCAGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCATATAAGTACGGATTTGACTGAACGTCCCCAGGCGGCTGTCGGCAATAATAATGCCGAGCGCCACCAGCACCGCCAGAATAAGGCGAATCTGTAGCGACGGGCCACGGCTAAAAATTGGCTTCATAAGTTATGCGTATTCTCGTATCAGACCAG > NC_000913/3399546‑3400007 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |