| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,562,611 | A→C | F156V (TTT→GTT) | ddpX ← | D‑ala‑D‑ala dipeptidase, Zn‑dependent |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,562,611 | 0 | A | C | 98.2% | 151.3 / ‑4.8 | 57 | F156V (TTT→GTT) | ddpX | D‑ala‑D‑ala dipeptidase, Zn‑dependent |
| Reads supporting (aligned to +/- strand): ref base A (1/0); new base C (27/29); total (28/29) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.91e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.33e-01 | |||||||||||
CACCAGCATATCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGAGCAATGTGGGACGAAACGATATCGATCTCTTCATGACAGTTTCCTGATTAACTGACGTGCTGTGT‑GCCAGGGGATATAAAACAAGAGAATTG‑ATCAGCGAGCAGAGGGTAACTCGCTGCCTGGGGTAATTCGAAGTGCCACCATTCGCTGGAGATACCGACAAAACCGCCACCAGTCATTATCGCATTCAGCAACAGCCGATTGCGCTGAGCGGCGGGCGGGACGGAAGGGTGATAGGCATGGGAGCGCTCGTGCATTTCATCGAACCCTGCGCCCATATCGAGGATGTTCCCGTGCTCATCACGAAGCGTCAGGTCGATCGCCGTGCCACGGCTGTGATTAGAACCGACCGTCACATCAACAACATATTGCGGGTCTGGGCAGGCTTGCC > NC_000913/1562383‑1562838 | cACCAGCATATCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGAGCAATGTGGGACGAAACGATATCGATCTCTTCATGACAGTTTCCTGATTAACTGACGTGCTGTGT‑GCCAGGGGATATAAAACAAGAGAATTG‑ATCAGCGAGCAGAGGGTAACTCGCTGCCTGGGGTAATTCGAAGTGCCACCATTCGCTGGAGATACCGACAAAACCGcca > 1:701981/1‑236 (MQ=255) ccaaGCATTTCCTTGTGTGCGGCGGCGTGCGACACCGGGAAATTTGTGGCAAGGACGAGCGCGAGCAATGTGGGACGAAACGATATCGATCTCTTCATGACAGTTTCCTGATTAACTGACGTGCTGTGT‑GCCAGGGGATATAAAACAAGAGAATTG‑ATCAGCGAGCAGAGGGTAACTCGCTGCCTGGGGTAATTCGAAGTGCCACCATTCGCTGGAGATACCGACAACACCGccac < 2:111631/233‑1 (MQ=255) aGCATATCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGAGCAATGTGGGACGAAACGATATCGATCTCTTCATGACAGTTTCCTGATTAACTGACGTGCTGTGT‑GCCAGGGGATATAAAACAAGAGAATTG‑ATCAGCGAGCAGAGGGTAACTCGCTGCCTGGGGTAATTCGAAGTGCCACCCTTCGCTGGGGATACCGGCCACACCGCAACCAg > 2:382642/1‑236 (MQ=255) aGCATATCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGAGCAATGTGGGACGAAACGATATCGATCTCTTCATGACAGTTTCCTGATTAACTGACGTGCTGTGT‑GCCAGGGGATATAAAACAAGAGAATTG‑ATCAGCGAGCAGAGGGTAACTCGCTGCCTGGGGGAATTCGCAGTGCCACCATTCGCTGGAGATACCGACAACACAGCCACCAg > 1:710400/1‑236 (MQ=255) atatCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGAGCAATGTGGGACGAAACGATATCGATCTCTTCATGACAGTTTCCTGATTAACTGACGTGCTGTGT‑GCCAGGGGATATAAAACAAGAGAATTG‑ATCAGCGAGCAGAGGGTAACTCGCTGCCTGGGGTAATTCGAAGTGCCACCATTCGCTGGAGATACCGACAACACCGccacca < 2:318527/232‑1 (MQ=255) atCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGAGCAATGTGGGACGAAACGATATCGATCTCTTCATGACAGTTTCCTGATTAACTGACGTGCTGTGT‑GCCAGGGGATATAAAACAAGAGAATTG‑ATCAGCGAGCAGAGGGTAACTCGCTGCCTGGGGTAATTCGAAGTGCCACCATTCGCTGGAGATACCGACAACACCGCCACCAGTCAtt > 1:563295/1‑236 (MQ=255) tGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGAGCAATGTGGGACGAAACGATATCGATCTCTTCATGACAGTTTCCTGATTAACTGACGTGATGTGT‑GCCAGGGGATATAAAACAAGAGAATTG‑ATCAGCGAGCAGAGGGTAACCTGCTGCCTGGGGGAATTCGAAGCGCACCCAGTTGCTGGGGATACGGGCACCACGGCCACCAGGAATTATAGc > 2:657805/1‑235 (MQ=255) cggcggCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGAGCAATGTGGGACGAAACGATATCGATCTCTTCATGACAGTTTCCTGATTAACTGACGTGCTGTGT‑GCCAGGGGATATAAAACAAGAGAATTG‑ATCAGCGAGCAGAGGGTAACTCGCTGCCTGGGGTAATTCGAAGTGCCACCATTCGCTGGAGATACCGACAACACCGCCACCAGTCATTATCGCATTCa > 1:245931/1‑235 (MQ=255) ggcggcGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGAGCAATGTGGGACGAAACGATATCGATCTCTTCATGACAGTTTCCTGATTAACTGACGTGCTGTGT‑GCCAGGGGATATAAAACAAGAGAATTG‑ATCAGCGAGCAGAGGGTAACTCGCTGCCTGGGGTAATTCGAAGTGCCACCATTCGCTGGAGATACCGACAACACCGCCACCAGTCATTATCGCATTCAGc > 2:38686/1‑236 (MQ=255) gcAACCGGGAAATTTGTGGCAAGGACGAGCGCGAGCAATGTGGGACGAAACGATATCGATCTCTTCATGACAGTTTCCTGATTAACTGACGTGCTGTGT‑GCCAGGGGATATAAAACAAGAGAATTG‑ATCAGCGAGCAGAGGGTAACTCGCTGCCTGGGGTAATTCGAAGTGCCACCATTCGCTGGAGATACCGACAACACCGCCACCAGTCATTATCGCATTCAGCAACAGCCGa < 2:563295/235‑1 (MQ=255) tgtgGCAAGGACGAGCGCGAGCAATGTGGGACGAAACGATATCGATCTCTTCATGACAGTTTCCTGATTAACTGACGTGCTGTGT‑GCCAGGGGATATAAAACAAGAGAATTG‑ATCAGCGAGCAGAGGGTAACTCGCTGCCTGGGGTAATTCGAAGTGCCACCATTCGCTGGAGATACCGACAACACCGCCACCAGTCATTATCGCATTCAGCAACAGCCGATTGCGCTGAgcggcg > 1:753034/1‑236 (MQ=255) tgtgGCAAGGACGAGCGCGAGCAATGTGGGACGAAACGATATCGATCTCTTCATGACAGTTTCCTGATTAACTGACGTGCTGTGT‑GCCAGGGGATATAAAACAAGAGAATTG‑ATCAGCGAGCAGAGGGTAACTCGCTGCCTGGGGTAATTCGAAGTGCCACCATTCGCTGGAGATACCGACAACACCGCCACCAGTCATTATCGCATTCAGCAAAAGCCGATTGCGCTGAgcggcg > 1:731902/1‑236 (MQ=255) ggccAAGGACGTGCGGGAGCAATTGGGGACGAAACGATATCGATCTCTTCATGACAGTTTCCTGATTAACTGACGTGCTGTGT‑GCCAGGGGATATAAAACAAGAGAATTG‑ATCAGCGAGCAGAGGGTAACTCGCTGCCTGGGGTAATTCGAAGTGCCACCATTCGCTGGAGATACCGACAACACCGCCACCAGTCATTATCGCATTCAGCAACAGCCGATTGCGCTGAGCggcggg < 1:382642/233‑1 (MQ=255) gCAAGGACGAGCGCGAGCAATGTGGGACGAAACGATATCGATCTCTTCATGACAGTTTCCTGATTAACTGACGTGCTGTGT‑GCCAGGGGATATAAAACAAGAGAATTG‑ATCAGCGAGCAGAGGGTAACTCGCTGCCTGGGGTAATTCGAAGTGCCACCATTCGCTGGAGATACCGACAACACCGCCACCAGTCATTATCGCATTCAGCAACAGCCGATTGCGCTGAGCggcgggcg < 1:532397/236‑1 (MQ=255) aGCAATGTGGGACGAAACGATATCGATCTCTTCATGACAGTTTCCTGATTAACTGACGTGCTGTGT‑GCCAGGGGATATAAAACAAGAGAATTG‑ATCAGCGAGCAGAGGGTAACTCGCTGCCTGGGGTAATTCGAAGTGCCACCATTCGCTGGAGATACCGACAACACCGCCACCAGTCATTATCGCATTCAGCAACAGCCGATTGCGCTGAGCGGCGGGCGGGACGGAAGGGTg < 1:435013/234‑1 (MQ=255) caaagtggggACGAACCGAATCCAATCTCTTCATGACAGTTTCCGGATTAACTGACGTGCTGGTG‑GCCAGGGGATAAAAACCAAGAGAATTG‑ACCGGCGAGCAGAGGGTAACTCGCTGCCTGGGGTAATTCGAAGTGCCACCATTCGCTGGAGATACCGACAACCCCGCCACCAGTCATTATCGCATTCAGCAACAGCCGATTGCGCTGAGCGGCGGGCGGGACGGAAGGGTGAt < 2:305691/228‑1 (MQ=255) aCGAAACGATATCGATCTCTTCATGACAGTTTCCTGATTAACTGACGTGCTGTGT‑GCCAGGGGATATAAAACAAGAGAATTG‑ATCAGCGAGCAGAGGGTAACTCGCTGCCTGGGGTAATTCGAAGTGCCACCATTCGCTGGAGATACCGACAACACCGCCACCAGTCATTATCGCATTCAGCAACAGCCGATTGCGCTGAGCGGCGGGCGGGGCGGGAGGGGGATAGGGCTGGGa > 2:8571/1‑235 (MQ=255) aCGAAACGATATCGATCTCTTCATGACAGTTTCCTGATTAACTGACGTGCTGTGT‑GCCAGGGGATATAAAACAAGAGAATTG‑ATCAGCGAGCAGAGGGTAACTCGCTGCCTGGGGTAATTCGAAGTGCCACCATTCGCTGGAGATACCGACAACACCGCCACCAGTCATTATCGCATTCAGCAACAGCCGATTGCGCTGAGCGGCGGGCGGGACGGAAGGGTGATAGGCATGGGAg < 1:504562/236‑1 (MQ=255) aaCGATATCGATCTCTTCATGACAGTTTCCTGATTAACTGACGTGCTGTGT‑GCCAGGGGATATAAAACAAGAGAATTG‑ATCAGCGAGCAGAGGGTAACTCGCTGCCTGGGGTAATTCGAAGTGCCACCATTCGCTGGAGATACCGACAACACCGCCACCAGTCATTATCGCATTCAGCAACATCCGATTGCGCTGAGCGGCGGGCGGGATGGAAAGGTGATAAGCATGGGAgcgac > 2:289014/1‑234 (MQ=255) aaCGATATCGATCTCTTCATGACAGTTTCCTGATTAACTGACGTGCTGTGT‑GCCAGGGGATATAAAACAAGAGAATTG‑ATCAGCGAGCAGAGGGTAACTCGCTGCCTGGGGTAATTCGAAGTGCCACCATTCGCTGGAGATACCGACAACACCGCCACCAGTCATTATCGCATTCAGCAACAGCCGATTGCGCTGAGCGGCGGGCGGGACGGAACAGGGGAAGGCATGGGAgcgcc > 2:88568/1‑235 (MQ=255) atCGTTCTCTTCATGACAGTTTCCTGATTAACTGACTGGCTGTGT‑GCCAGGGAATATAAAACAAGAGAATTG‑ATCAGCGAGCAGAGGGTACCTCGCTGCCTGGGGTAATTCGAAGTGCCACCATTCGCTGGAGATACCGACAACACCGCCACCAGTCATTATCGCATTCAGCAACAGCCGATTGCGCTGAGCGGCGGGCGGGACGGAAGGGTGATAGGCATGGGAGCGCTCGTGCa < 2:731902/236‑1 (MQ=255) cgttctcTGAATGACAGTTTCCTGATTAACTGACGTGCTGGGT‑GCAAGGGGATATAAAACAAGAGAATTG‑ATCAGCGAGCAGGGGGTAACTCGCTGCCGGGGGTAATTCGAAGTGCCACCATTCGCTGGAGATACCGACAACACCGCCACCAGTCATTATCGCATTCAGCAACAGCCGATTGCGCTGAGCGGCGGGCGGGACGGAAGGGTGATAGGCATGGGAGCGCTCGTGCa < 2:36176/231‑1 (MQ=255) aTCTCTTCATGACAGTTTCCTGATTAACTGACGTGCTGTGT‑GCCAGGGGATATAAAACAAGAGAATTG‑ATCAGCGAGCAGAGGGTAACTCGCTGCCTGGGGTAATTCGAAGTGCCACCATTCGCTGGAGATACCGACAACACCGCCACCAGTCATTATCGCATTCAGCAACAGCCGATTGCGCTGAGCGGCGGGCGGGACGGAAGGGGGATAGGCATGGGAGCGCTCGTGCATTTc > 1:467232/1‑236 (MQ=255) ctctTCATGACAGTTTCCTGATTAACTGACGTGCTGTGT‑GCCAGGGGATATAAAACAAGAGAATTG‑ATCAGCGAGCAGAGGGTAACTCGCTGCCTGGGGTAATTCGAAGTGCCACCATTCGCTGGAGATACCGACAACACCGCCACCAGTCATTATCGCATTCAGCAACAGCCGATTGCGCTGAGCGGCGGGCGGGACGGAAAGGTGATAGGCATGGGAGCGCTCGTGCAGTTCAt > 1:36176/1‑236 (MQ=255) ttCATGACAGTTTCCTGATTAACTGACGTGCTGTGT‑GCCAGGGGATATAAAACAAGAGAATTG‑ATCAGCGAGCAGAGGGTAACTCGCTGCCTGGGGTAATTCGAAGTGCCACCATTCGCTGGAGATACCGACAACACCGCCACCAGTCATTATCGCATTCAGCAACAGCCGATTGCGCTGAGCGGCGGGCGGGACGGAAGGGTGATAGGCATGGGAGCGCTCGGGCATTTCATCg > 1:64234/1‑235 (MQ=255) acctgttCCTGATTAACGGACGGTGTGGGG‑GCCAGGGGAAAAAAAACAAGAAAATGG‑ATCAGCGAGCAGGGGGTAACTCGCTGCCTGGGGTAATTCGAAGTGCCCCCATTCGCTGGAGATACCGACAACACCGCCACCAGTCATTATCGCATTCAGCAACAGCCGATTGCGCTGAGCGGCGGGCGGGACGGAAGGGTGATAGGCATGGGAGCGCTCGTGCATTTCATCGAACCCTg < 2:753034/231‑1 (MQ=255) tttCCTGATTAACTGACGTGCTGTGT‑GCCAGGGGATATAAAACAAGAGAATTG‑ATCAGCGAGCAGAGGGTAACTCGCTGCCTGGGGTAATTCGAAGTGCCACCATTCGCTGGAGATACCGACAACACCGCCACCAGTCATTATCGCATTCAGCAACAGCCGATTGCGCt < 2:505896/169‑1 (MQ=255) tttCCTGATTAACTGACGTGCTGTGT‑GCCAGGGGATATAAAACAAGAGAATTG‑ATCAGCGAGCAGAGGGTAACTCGCTGCCTGGGGTAATTCGAAGTGCCACCATTCGCTGGAGATACCGACAACACCGCCACCAGTCATTATCGCATTCAGCAACAGCCGATTGCGCt > 1:505896/1‑169 (MQ=255) tttCCTGATTAACTGACGTGCTGTGT‑GCCAGGGGATATAAAACAAGAGAATTG‑ATCAGCGAGCAGAGGGTAACTCGCTGCCTGGGGTAATTCGAAGTGCCACCATTCGCTGGAGATACCGACAACACCGCCACCAGTCATTATCGCATTCAGCAACAGCCGATTGCGCTGAGCGGCGGGCGGGACgg < 2:698372/187‑1 (MQ=255) tttCCTGATTAACTGACGTGCTGTGT‑GCCAGGGGATATAAAACAAGAGAATTG‑ATCAGCGAGCAGAGGGTAACTCGCTGCCTGGGGTAATTCGAAGTGCCACCATTCGCTGGAGATACCGACAACACCGCCACCAGTCATTATCGCATTCAGCAACAGCCGATTGCGCTGAGCGGCGGGCGGGACgg > 1:698372/1‑187 (MQ=255) cgtaTTAACTGACGTGCTGTGT‑GCCAGGGGATATAAAACAAGAGAATTG‑ATCAGCGAGCAGAGGGTAACTCGCTGCCTGGGGTAATTCGAAGTGCCACCATTCGCTGGAGATACCGACAACACCGCCACCAGTCATTATCGCATTCAGCAACAGCCGATTGCGCTGAGCGGCGGGCGGGACGGAAGGGTGATAGGCATGGGAGCGCTCGTGCATTTCATCGAACCCTGCGcc < 1:479247/229‑1 (MQ=255) cTGATTAACTGACGTGCTGTGT‑GCCAGGGGATATAAAACAAGAGAATTG‑ATCAGCGAGCAGAGGGTAACTCGCTGCCTGGGGTAATTCGAAGTGCCACCATTCGCTGGAGATACCGACAACACCGCCACCAGTCATTATCGCATTCAGCAACAGCCGATTGCGCTGAGCGGCGGGCGGGACGGAAGGGTGATAGGCATGGGAGCGCTCGTGCATTTCATCGAACCCTgcg < 1:38686/230‑1 (MQ=255) ttAACGGACGTGCT‑TGTGGCCGGGGAATAAAAAGCAAG‑GAAGTGTGTCAGCGAGCGGAGGGAAACTCGCTTCTTGGGGTAATTCGAAGTGCCACCATTCGCGGGAGATACCAAAAGCACCGCCCCCAGTCATTATCGCATTCAGCAACAGCCGATTGCGCTGAGCGGCGGGCGGGACGGAAGGGTGATAGGCATGGGAGCGCTCGTGCATTTCATCGAACCCTGCGCCCATATCGa < 2:245931/236‑1 (MQ=255) acgagcGTGCTGGGG‑GCAGGGGGATATAAAACAAGAGAATTA‑GCCAGCGAGCAGGGGGAAACCCGCAGCCTGGGGTAATTCGAAGTGCCACCATTCGCTGGAGATACCGACAACCCCGCCACCAGTCATTATCGCATTCAGCAACAGCCGATTGCGCTGAGCGGCGGGCGGGACGGAAGGGTGATAGGCATGGGAGCGCTCGTGCATTTCATCGAACCCTGCGCCCATATCGAGGa < 2:467232/231‑1 (MQ=255) tgt‑gCCAGGGGATATAAAACAAGAGAATGG‑ATCAGCGAGCAGAGGGTAACTCGCTGCCTGGGGTAATTCGAAGTGCCACCATTCGCTGGAGATACCGACAACACCGCCACCAGTCATTATCGCATTCAGCAACAGCCGATTGCGCTGAGCGGCGGGCGGGACGGAAGGGTGATAGGCATGGGAGCGCTCGTGCATTTCATCGAACCCTGCGCCCATATCGAGGATGTTCCCGTGc < 1:643573/235‑1 (MQ=255) gATATAAAACAAGAGAATTG‑ATCAGCGAGCAGAGGGTAACTCGCTGCCTGGGGTAATTCGAAGTGCCACCATTCGCTGGAGATACCGACAACACCGCCACCAGTCATTATCGCATTCAGCAACAGCCGATTGCGCTGAGCGGCGGGCGGGGCGGAAGGGGGATAGGCATGGTAGCGTCCGTGCATCTCATCGAACCCTTCGCCCCATTCGAGGATGTTCCCCTGCtcagtctcta > 2:445874/1‑228 (MQ=255) gATATAAAACAAGAGAATTG‑ATCAGCGAGCAGAGGGTAACTCGCTGCCTGGGGTAATTCGAAGTGCCACCATTCGCTGGAGATACCGACAACACCGCCACCAGTCATTATCGCATTCAGCAACAGCCGATTGCGCTGAGCGGCGGGCGGGACGGAAGGGTGATAGGCATGGGAGCGCCCGTGCATTTCATCGAACCCTGCGCCCATATCGAGGATGTTCCCGGGCTCATCACGaa > 1:602924/1‑235 (MQ=255) tataAAACAAGAGAATTG‑ATCAGCGAGCAGAGGGTAACTCGCTGCCTGGGGTAATTCGAAGTGCCACCATTCGCTGGAGATACCGACAACACCGCCACCAGTCATTATCGCATTCAGCAACAGCCGATTGCGCTGAGCGGCGGGCGGGACGGAAGGGGGATAGGCATGGGAGCGCTCGTGCATTTCATCGAACCCTGCGCCCATATCGCGGATGTTCCCGTGCTCATCACGAAGCg > 1:92189/1‑236 (MQ=255) tataAAACAAGAGAATTG‑ATCAGCGAGCAGAGGGTAACTCGCTGCCTGGGGTAATTCGAAGTGCCACCATTCGCTGGAGATACCGACAACACCGCCACCAGTCATTATCGCATTCAGCAACAGCCGATTGCGCTGAGCGGCGGGCGGGACGGAAGGGGGATAGGCATGGGAGCGCTCGTGCATTTCATCGAACCCTGCGACCATATCCAGGATGTTCCCGTGGTCATCACGacacg > 2:474861/1‑232 (MQ=255) aaaaCAAGAGAATGG‑ATCCGCGAGCAGAGGGTAACTCGCTGCCTGGGGTAATTCGAAGTGCCACCATTCGCTGGAGATACCGACAACACCGCCACCAGTCATTATCGCATTCAGCAACAGCCGATTGCGCTGAGCGGCGGGCGGGACGGAAGGGTGATAGGCATGGGAGCGCTCGTGCATTTCATCGAACCCTGCGCCCATATCGAGGATGTTCCCGTGCTCATCACGAAGCGTc < 1:88568/235‑1 (MQ=255) gagaATTG‑ATCAGCGAGCAGAGGGTAACTCGCTGCCTGGGGTAATTCGAAGTGCCACCATTCGCTGGAGATACTGACAACACCGCCACCAGTCATTATCGCATTCAGCAACAGCCGATTGCGCTGAGCGGCGGGCGGGACGGAAGGGTGATAGGCATGGGAGCGCTCGTGCATTTCATCGAACCCTGCGCCCATATCGAGGATGTTCCCGTGCTCATCCCGAAGCGTCAGGTCGa > 1:42048/1‑235 (MQ=255) gaATTG‑GACAGCGAGCAGAGGGTAACTCGCTGCCTGGGGTAATTCGAAGTGCCACCATTCGCTGGAGATACCGACAACACCGCCACCAGTCATTATCGCATTCAGCAACAGCCGATTGCGCTGAGCGGCGGGCGGGACGGAAGGGTGATAGGCATGGGAGCGCTCGTGCATTTCATCGAACCCTGCGCCCATATCGAGGATGTTCCCGTGCTCATCACGAAGCGTCAGGTCGATCg < 1:85644/236‑1 (MQ=255) aTCAGCGAGCAGAGGGTAACTCGCTGCCTGGGGTAATTCGAAGTGCCACCATTCGCTGGAGATACCGACAACACCGCCACCAGTCATTATCGCATTCAGCAACAGCCGATTGCGCTGAGCGGCGGGCGGGACGGAAGGGTGATAGGCAt < 1:128816/149‑1 (MQ=255) aTCAGCGAGCAGAGGGTAACTCGCTGCCTGGGGTAATTCGAAGTGCCACCATTCGCTGGAGATACCGACAACACCGCCACCAGTCATTATCGCATTCAGCAACAGCCGATTGCGCTGAGCGGCGGGCGGGACGGAAGGGTGATAGGCAt > 2:128816/1‑149 (MQ=255) cAGCGAGCAGAGGGTAACTCGCTGCCTGGGGTAATTCGAAGTGCCACCATTCGCTGGAGATACCGACAACACCGCCACCAGTCATTATCGCATTCAGCAACAGCCGATTGCGCTGAGCGGCGGGCGGGACGGAAGGGGGATAGGCATGGGAGCGCTCGTGCATTTCATCGAACCCTGCGCCCATATCGAGGATGTTCCCGTGCTCATCACGAAGCGTCAGGTCGATTGCCCTGcc > 1:456393/1‑235 (MQ=255) aGCAGAGGGTAACCTGGTGCCTGGGTTAATTCGAAGTTCCCCCATTCGCTGGAGATCCCGACAACCCCGCCACCAGTCATTATCGCATTCAGCAACAGCCGATTGCGCTGAGCGGCGGGCGGGACGGAAGGGTGATAGGCATGGGAGCGCTCGTGCATTTCATCGAACCCTGCGCCCATATCGAGGATGTTCCCGTGCTCATCACGAAGCGTCAGGTCGATCGCCGTGCCACGGCt < 1:289014/236‑1 (MQ=255) agGGTAACTCGCTGCCTGGGGTAATTCGAAGTGCCACCATTCGCTGGAGATACCGACAACACCGCCACCAGTCATTATCGCATTCAGCAACAGCCGATTGCGCTGAGCGGCGGGCGGGACGGAAGGGGGATAGGCATGGGAGCGCTCGTGCATTTCATCGAACCCTGGGGCCCTAATCAGGATGTTCCCCGGCTCATCACGAAACTTCAGGTGCGTAGCCGTTCCACGGCCGTGag > 2:357534/1‑235 (MQ=255) aCTCGCTGCCTGGGGTAATTCGAAGTGCCACCATTCGCTGGAGATACCGACAACACCGCCACCAGTCATTATCGCATTCAGCAACAGCCGATTGCGCTGAGCGGCGGGCGGGACGGAAGGGTGATAGGCATGGGAGCGCTCGGGCATTTCATCGAACCCTGCGCCCCTATCGAGGATGTTCCCGTGCTCCTCACGAAACGGACGGTCGAACGCCCGTCCACGGcctggatttgaa > 2:115057/1‑224 (MQ=255) cTCGCTGCCTGGGGTAATTCGAAGTGCCACCATTCGCTGGAGATACCGACAACACCGCCACCAGTCATTATCGCATTCAGCAACAGCCGATTGCGCTGAGCGGCGGGCGGGACGGAAGGGTGATAGGCATGGGAGCGCTCGTGCATTTCATCGAGCCCTGCGCCCATATCGAGGAGGTTCCCGTGCTCATCACGAAGCGTCAGGTCGATCGCCGGGCCACGGCTGGGATTAGAac > 1:668883/1‑235 (MQ=255) ccatGGCGTAATTCGAAGACACACCATTCGCTGGAGGTCCCGAACACACCGCCCACAGTCATTACCGCATTCAGCAACAGCCGATTGCGCTGAGCGGCGGGCGGGACGGAAGGGTGATAGGCATGGGAGCGCTCGTGCATTTCATCGAACCCTGCGCCCATATCGAGGATGTTCCCGTGCTCATCACGAAGCGTCAGGTCGATCGCCGTGCCACGGCTGTGATTAGAACCGACCGt < 2:456393/233‑1 (MQ=255) cTGGGGTAATTCGAAGTGCCACCATTCGCTGGAGATCCCGACAACACCGCCACCAGTCATTATCGCATTCAGCAACAGCCGATTGCGCTGAGCGGCGGGCGGGACGGAAGGGTGATAGGCATGGGAGCGCTCGTGCATTTCATCGAACCCTGCGCCCATATCGAGGATGTTCCCGTGCTCATCACGAAGCGTCAGGTCGATCGCCGTGCCACGGCTGTGATTAGAACCGACCGTc < 1:474861/235‑1 (MQ=255) ggggTAATTCGAAGTGCCACCATTCGCTGGAGATACCGACAACACCGCCACCAGTCATTATCGCATTCAGCAACAGCCGATTGCGCTGAGCGGCGGGCGGGACGGAAGGGTGATAGGCATGGGAGCGCTCGTGCATTTCATCg < 1:649965/143‑1 (MQ=255) gggAAATTCAAAGTCCCACCATTCGCTGGAGATACCGACAACCCCGCCACCGGTCATTAGCGCAGTCAGCAACAGCCGATTGCGCTGAGCGGCGGGCGGGACGGAAGGGTGATAGGCATGGGAGCGCTCGTGCATTTCATCGAACCCTGCGCCCATATCGAGGATGTTCCCGTGCTCATCACGAAGCGTCAGGTCGATCGCCGTGCCACGGCTGTGATTAGAACCGACCGTCACAt < 2:602924/236‑1 (MQ=255) ttCGAAGTGCCACCATTCGCTGGAGATACCGACAACACCGCCACCAGTCATTATCGCATTCAGCAACAGCCGATTGCGCTGAGCGGCGGGCGGGACGGGAGGGTGATAGGCCTGGGAGCGCTCGTGCATTTCATCCAACCCTg > 2:649965/1‑143 (MQ=255) gcaaccaTTCGCTGGAGTTCCTGCAAACCCCGCCACCAGTCATTATCGCATTCAGCAACAGCCGATTGCGCTGAGCGGCGGGCGGGACGGAAGGGTGATAGGCATGGGAGCGCTCGTGCATTTCATCGAACCCTGCGCCCATATCGAGGATGTTCCCGTGCTCATCACGAAGCGTCAGGTCGATCGCCGTGCCACGGCTGTGATTAGAACCGACCGTCACATCAACAACATATTg < 2:42048/232‑1 (MQ=255) acaTTCGGTGGAAATCCGGACCACCCCGCCACCAGTCATTATCGAATTAAGCAACGGCCGATTGCGCTGAGCGGCGGGCGGGACGGAAGGGTGATAGGCATGGGAGCGCTCGTGCATTTCATCGAACCCTGCGCCCATATCGAGGATGTTCCCGTGCTCATCACGAAGCGTCAGGTCGATCGCCGTGCCACGGCTGTGATTAGAACCGACCGTCACATCAACAACATATTGCggg < 2:64234/234‑1 (MQ=255) ccGACAACACCGCCACCAGTCATTATCGCATTCAGCAACAGCCGATTGCGCTGAGCGGCGGGCGGGACGGAAGGGTGATAGGCATGGGAGCGCTCGTGCATTTCATCGAACCCTGCGCCCATATCGAGGATGTTCCCGTGCTCATCACGAAGCGTCAGGTCGATCGCCGTGCCACGGCTGTGATTAGAACCGACCGTCACATCAACAACATATTGCGGGTCTGGGCAGGCTTGcc < 1:115057/235‑1 (MQ=255) | CACCAGCATATCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGAGCAATGTGGGACGAAACGATATCGATCTCTTCATGACAGTTTCCTGATTAACTGACGTGCTGTGT‑GCCAGGGGATATAAAACAAGAGAATTG‑ATCAGCGAGCAGAGGGTAACTCGCTGCCTGGGGTAATTCGAAGTGCCACCATTCGCTGGAGATACCGACAAAACCGCCACCAGTCATTATCGCATTCAGCAACAGCCGATTGCGCTGAGCGGCGGGCGGGACGGAAGGGTGATAGGCATGGGAGCGCTCGTGCATTTCATCGAACCCTGCGCCCATATCGAGGATGTTCCCGTGCTCATCACGAAGCGTCAGGTCGATCGCCGTGCCACGGCTGTGATTAGAACCGACCGTCACATCAACAACATATTGCGGGTCTGGGCAGGCTTGCC > NC_000913/1562383‑1562838 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |