| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 162,349 | A→C | Y82S (TAC→TCC) | hrpB → | putative ATP‑dependent helicase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 162,349 | 0 | A | C | 96.2% | 141.0 / ‑5.9 | 52 | Y82S (TAC→TCC) | hrpB | putative ATP‑dependent helicase |
| Reads supporting (aligned to +/- strand): ref base A (1/1); new base C (19/31); total (20/32) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GTCTTACCTGAATTACTTACCGCTCTCGATTGTGCGCCGCAGGTATTATTAAGTGCGCCGACCGGGGCCGGGAAATCAACCTGGCTGCCGCTGCAACTGCTGGCGCATCCCGGCATTAACGGGAAAATTATCCTGCTGGAGCCGCGT‑CGTCTGGCGGCGCGTAACGTCGCGCAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTACCGGATGCGTGCG‑CAAAACTGCGTCGGGCCGAATACCCGCCTGGAAGTGGTTACCGAAGGCGTGCTGACGCGCATGATCCAGCGTGACCCGGAACTGAGCGGTGTTGGACTGGTGATCCTTGATGAATTTCATGAGCGCAGCTTGCAGGCGGATTTGGCGTTGGCGCTGTTACTCGATGTGCAACAAGGTCTGCGTGATGACCTTAAACTGCTGATT > NC_000913/162129‑162566 | gttttACCTGAATTGCGTACCGCTCTCGATTGTGCGCCGCAGGTATTATTAAGTGCGCCGACCGGGGCCGGGAAATCAACCTGGCTGCCGCTGCAACTGCTGGCGCATCCCGGCATTAACGGGAAAATTATCCTGCTGGAGCCGCGT‑CGTCTGGCGGCGCGTAACGTCGCGCAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCG‑Ca < 2:763179/233‑1 (MQ=255) tGAATTACTTACCGCTCTCGATTGTGCGCCGCAGGTATTATTAAGTGCGCCGACCGGGGCCGGGAAATCAACCTGGCTGCCGCTGCAACTGCTGGCGCATCCCGGCATTAACGGGAAAATTATCCTGCTGGAGCCGCGT‑CGTCTGGCGGCGCGTAACGTCGCGCAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCG‑CAAAACTGCg > 1:328276/1‑236 (MQ=255) tGAATTACTTACCGCTCTCGATTGTGCGCCGCAGGTATTATTAAGTGCGCCGACCGGGGCCGGGAAATCAACCTGGCTGCCGCTGCAACTGCTGGCGCATCCCGGCATTAACGGGAAAATTATCCTGCTGGAGCCGCGT‑CGTCTGGCGGCGCGTAACGTCGCGCAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGGTGGGTCCCGGATGCGTGCG‑CAAAACTTCg > 1:321661/1‑236 (MQ=255) aTTACTTACCGCTCTCGATTGTGCGCCGCAGGTATTATTAAGTGCGCCGACCGGGGCCGGGAAATCAACCTGGCTGCCGCTGCAACTGCTGGCGCATCCCGGCATTAACGGGAAAATTATCCTGCTGGAGCCGCGT‑CGTCTGGCGGCGCGTAACGTCGCGCAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCG‑CAAAACTGCGTc > 1:400970/1‑235 (MQ=255) cttacCGCTCTCGATTGTGCGCCGCAGGTATTATTAAGTGCGCCGACCGGGGCCGGGAAATCAACCTGGCTGCCGCTGCAACTGCTGGCGCATCCCGGCATTAACGGGAAAATTATCCTGCTGGAGCCGCGT‑CGTCTGGCGGCGCGTAACGTCGCGCAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGATGCGGGCG‑CAAAACTGCGCCGGGcc > 1:199119/1‑236 (MQ=255) ggtatggATTGTGCCCCGCAGTTATTATTAAGTCCGCAGACCGGGCCCGGGAAATCACCCTGGCTGCCGCTGCAACTGCTGGCGCATCCCGGCATTAACGGGAAAATTATCCTGCTGGAGCCGCGT‑CGTCTGGCGGCGCGTAACGTCGCGCAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCG‑CAAAACTGCGTCGGGCCGAATAc < 1:568428/230‑1 (MQ=255) ctcAATTGGGCCCCGAAGGTATTATGAAGTGCGCCGACCGGGGCCGGGAAATCAACCTGGCTGCCGCTGCAACTGCTGGCGCATCCCGGCATTAACGGGAAAATTATCCTGCTGGAGCCGCGT‑CGTCTGGCGGCGCGTAACGTCGCGCAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCG‑CAAAACTGCGTCGGGCCGAATACCCg < 1:411579/236‑1 (MQ=255) ggtggcccgcAGGTATTATTACGTGCGCCGACCGGGGCCGGGAAATCACCCGGGCTGCCGCTGCAACGGCTGGCGCATCCCGGCATTAACGGGAAAATTATCCTGCTGGAGCCGCGT‑CGTCTGGCGGCGCGTAACGTCGCGCAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCG‑CAAAACTGCGTCGGGCCGAATACCCGCCTGGa < 1:151722/230‑1 (MQ=255) tcgcgagagttttagtaAGCGCGCCGACGGGGCCCGGAAACTCAACCTGGCTGCCCGTGCAACTGCTGGCGCATCCCGGCATTAGCGGGAAAATTATCCTGCTGGAGCCGCGT‑CGTCTGGCGGCGCGTAACGTCGCGCAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCG‑CAAAACTGCGTCGGGCCGAATACCCGCCTGGAAGTg < 2:604495/225‑1 (MQ=255) attattAGGTCCGCCGACCGGGGCCGGGAAATCAACCGGGCTCCCGTTGCAACTGCTGGCCCATCCCGGAATTACCGGGAAAATTACCCTGCTGGAGCCGCGT‑CGTCTGGCGGCGCGTAACGTCGCGCAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCG‑CAAAACTGCGTCGGGCCGAATACCCGCCTGGAAGTGGTTACCGAAg < 2:199119/236‑1 (MQ=255) tGCGCCGACCGGGGCCGGGAAATCAACCTGGCTGCCGCTGCAACTGCTGGCGCATCCCGGCATTAACGGGAAAATTATCCTGCTGGAGCCGCGT‑CGTCTGGCGGCGCGTAACGTCGCGCAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCG‑CAAAACTGCGGCGGGCCGAATACCCGCCTGGAAGTGGTGACCGAAGGCGTGCTGa > 1:209162/1‑236 (MQ=255) cgcCGACCGGGGCCGGGAAATCAACCTGGCTGCCGCTGCAACTGCTGGCGCATCCCGGCATTAACGGGAAAATTATCCTGCTGGAGCCGCGT‑CGTCTGGCGGCGCGTAACGTCGCGCAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCG‑CAAAACTGCGTCGGGCCGAATACCCGCCTGGAAGTGGTTACCGAAGGCGTGCTGAcg > 1:577105/1‑236 (MQ=255) cgcCGACCGGGGCCGGGAAATCAACCTGGCTGCCGCTGCAACTGCTGGCGCATCCCGGCATTAACGGGAAAATTATCCTGCTGGAGCCGCGT‑CGTCTGGCGGCGCGTAACGTCGCGCAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCG‑CAAAACTGCGTCGGGCCGAATACCCGCCTGGAAGGGGTTACCGAAGGCGTGCTGAcg > 1:392032/1‑236 (MQ=255) cgcCGACCGGGGCCGGGAAATCAACCTGGCTGCCGCTGCAACTGCTGGCGCATCCCGGCATTAACGGGAAAATTATCCTGCTGGAGCCGCGT‑CGTCTGGCGGCGCGTAACGTCGCGCAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGAGGCGTGGG‑GAAAACGGCGACGGGCCGAATAACCGACTTGAAGTGGTTGCCGCAGgcgcgcgtacc > 2:96009/1‑231 (MQ=255) gcCGACCGGGGCCGGAAAATCACCCTGGCTGCCGCTGAACCTGCTGGCCCTTCCCGGCATTAACGGGAAAATTATCCTGCTGGAGCCGCGT‑CGTCTGGCGGCGCGTAACGTCGCGCAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCG‑CAAAACTGCGTCGGGCCGAATACCCGCCTGGAAGTGGTTACCGAAGGCGTGCTGAc < 2:305684/234‑1 (MQ=255) gcccGGTGCCGAGAATTCATCGTGCCTGCCCGTGCAACGGCGGGCCCTTCCAGGCATTAACGGGAAAATTATCCTGCTGGGGCCGCGT‑CGTCGGGCGGCGCGTAACGTCGCGCAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCG‑CAAAACTGCGTCGGGCCGAATACCCGCCTGGAAGTGGTTACCGAAGGCGTGCTGACgcgc < 2:737770/233‑1 (MQ=255) gACCGGGGCCGGGAAACCAACCGGGCTGCCGCTGCAACTGCTGGCGCATCCCGGCATTAACGGGAAAATTATCCTGCTGGAGCCGCGT‑CGTCTGGCGGCGCGTAACGTCGCGCAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCG‑CAAAACTGCGTCGGGCCGAATACCCGCCTGGAAGTGGTTACCGAAGGCGTGCTGACGCGCa < 1:96009/236‑1 (MQ=255) aCCGGGGCCGGGAAATCAACCTGGCTGCCGCTGCCACTGCTGGCGCCTCCCGGCATTAACGGGAAAATTATCCTGCTGGAGCCGCGT‑CGTCTGGCGGCGCGTAACGTCGCGCAACGGCTGGCGGGGCGGCTTAACGAAAAGCCAGGCGCTACCGTTGGCCACCGGATGGAGGCGTCAAAAC‑GCGTCGGTGCGACTACCCGCCTCGAAGCGGGTACCGGACGCGTGCTTACgcgcct > 2:443600/1‑234 (MQ=255) ggAAATCAACCTGGCTGCCGCTGCAACTGCTGGCGCATCCCGGCATTAACGGGAAAATTATCCTGCTGGAGCCGCGT‑CGTCTGGCGGCGCGTAACGTCGCGCAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATAACGTTGGCCCCCGGATGCGTGCG‑CAAAAATGCGTCGGGCCGCATACCCGCCTGGAAGTGGTTACCCAATGCGGGCTGAGGCGCACGAACCAGCg > 2:316500/1‑235 (MQ=255) aTCACCCTGGCTGCCGCTGCACCTGGTGGCCAACCCCGGCATTACGGGGAAAATTACCCTGCGGGAGCCGGGT‑CGTCTGGCGGCGCGAAACGTCGCGCAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCG‑CAAAACTGCGTCGGGCCGAATCCCCGCCTGGAAGTGGTTACCGAAGGCGTGCTGACGCGCATGATCCAGCg < 2:321661/231‑1 (MQ=255) gCTGCCGCTGCAACTGCTGGCGCATCCCGGCATTAACGGGAAAATTATCCTGCTGGAGCCGCGT‑CGTCTGGCGGCGCGTAACGTCGCGCAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCG‑CCAAACTGCGTCGGGCCGAATACCCGCCTGGGAGTGGGTACCGAAGGCGTGCTGAGCGGCATGATCCAGCGTGACCCGGAACTGa > 2:92643/1‑236 (MQ=255) gCTGCCGCTGCAACTGCTGGCGCATCCCGGCATTAACGGGAAAATTATCCTGCTGGAGCCGCGT‑CGTCTGGCGGCGCGTAACGTCGCGCAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCG‑CAAAACTGCGTCGGGCCGAATACCCGCCTGGAAGTGGTTACCGAAGGCGTGCTGACGGGCATGATCCACGCTGACCCgggaattg > 1:739632/1‑230 (MQ=255) ttcccGCTGAAACTGCTGGCGCATCCCGGAATTACCGGGAAAATTATCCTGCGGGGGCCGCGT‑CGTCTGGCGGCGCGTAACGTCGCGCAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCG‑CAAAACTGCGTCGGGCCGAATACCCGCCTGGAAGTGGTTACCGAAGGCGTGCTGACGCGCATGATCCAGCGTGACCCGGAACTGAg < 2:134791/233‑1 (MQ=255) ctgctgCGGCATGTGCTGGCCCACACGGGCGTTAACGTGAAAATTACCCTGCTGGAGCCGCGT‑CGTCTGGGGGAGCGTACCGTCGCGCAACGGCTGGCGGAGCTGCTTAACGAAAGGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCG‑CAAAACTGCGTCGGGCCGAATACCCGCCTGGAAGTGGTTACCGAAGGCGTGCTGACGCGCATGATCCAGCGTGACCCGGAACTGAg < 2:741196/236‑1 (MQ=255) cTGCCGGTGCAACTGCTGGCTCATCCCGGCATTAACGGGAAAATTATCCTGCTGGAGCCGCGT‑CGTCTGGCGGCGCGTAACGTCGCGCAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCG‑CAAAACTGCGTCGGGCCGAATACCCGCCTGGAAGTGGTTACCGAAGGCGTGCTGACGCGCATGATCCAGCGTGACCCGGAACTGAg < 1:217379/236‑1 (MQ=255) cTGCCGCTGCACCTGCGGGCGCATCCCGGCATTAACGGGAAAATTAGCCGGCTGGGGCCGGGT‑CGTCTGGCGGCGCGTAACGTCGCGCAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCG‑CAAAACTGCGTCGGGCCGAATACCCGCCTGGAAGTGGTTACCGAAGGCGTGCTGACGCGCATGATCCAGCGTGACCCGGAACTGAg < 1:379045/236‑1 (MQ=255) cTGCCGCTGCAACTGCTGGCGCATCCCGGCATTAACGGGAAAATTATCCTGCTGGGGCCGCGT‑CGTCTGGCGGCGCGTAACGTCGCGCAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCG‑CAAAACTGCGTCGGGCCGAATACCCGCCTGGAAGTGGTTACCGAAGGCGTGCTGACGCGCATGATCCAGCGTGACCCGGAACTGAg < 1:316500/236‑1 (MQ=255) cTGCCGCTGAAACGGCTGGCGCATCCCGGCATTAACGGGAAAATTATCCTGCTGGAGCCGCGT‑CGTATGGCGGCGCGTAACGTCGCGCAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCG‑CAAAACTGCGTCGGGCCGAATACCCGCCTGGAAGTGGTTACCGAAGGCGTGCTGACGCGCATGATCCAGCGTGACCCGGAACTGAg < 1:206377/236‑1 (MQ=255) ccGCTGCAACTGCTGGCGCATCCCGGCATTAACGGGAAAATTATCCTGCTGGAGCCGCGT‑CGTCTGGCGGCGCGTAACGTCGCGCAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCG‑CAAAACTGCGTCGGGCCGAATAGCCGCCTGGAAGTGGTTTCCGAAGGCCGGCTGCAGCGGCGGATCCAGCGGGAGCCGGagccgacgag > 2:460295/1‑227 (MQ=255) cccATCCCGGCATTAACGGGACAATTATCCTGCTGGACCCGCGT‑CGTCTGGCGGCGCGTAACGTCGCGAAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCG‑CAAAACTGCGTCGGGCCGAATACCCGCCTGGAAGTGGTTACCGAAGGCGTGCTGACGCGCATGATCCAGCGTGACCCGGAACTGAGCGGTGTTGGACTGGt < 2:647060/230‑1 (MQ=255) ccgggtaTTACCGGAAAAAGTATCCGGCGGGGCCCGTGT‑CGTCTGGCGGCGCGTAACGTCGCGCAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCG‑CAAAACTGCGTCGGGCCGAATACCCGCCTGGAAGTGGTTACCGAAGGCGTGCTGACGCGCATGATCCAGCGTGACCCGGAACTGAGCGGTGTTGGACTGGTGATCCTtga < 2:392032/230‑1 (MQ=255) cccGGCATTACCGGGAAAATTCTCCTGCGGGAGCC‑CGTGTGGCGGGCGGCGCGTAACGTCGCGCAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCG‑CAAAACTGCGTCGGGCCGAATACCCGCCTGGAAGTGGTTACCGAAGGCGTGCTGACGCGCATGATCCAGCGTGACCCGGAACTGAGCGGTGTTGGACTGGTGATCCTtga < 2:577105/236‑1 (MQ=255) ggAAAATTATCCTGCTGGAGCCGCGT‑CGTCTGGCGGCGCGTAACGTCGCGCAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCG‑CAAAACTGCGTCGGGCCGAATACCCGCCTGGAAGTGGTTACCGAAGGCGTGCTGACGCGCATGAt > 2:627086/1‑178 (MQ=255) ggAAAATTATCCTGCTGGAGCCGCGT‑CGTCTGGCGGCGCGTAACGTCGCGCAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCG‑CAAAACTGCGTCGGGCCGAATACCCGCCTGGAAGTGGTTACCGAAGGCGTGCTGACGCGCATGAt < 1:627086/178‑1 (MQ=255) ctgGAGCCGCGT‑CGTCTGGCGGCGCGTAACGTCGCGCAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCG‑CAAAACTGCGTCGGGCCGAATAcc < 1:24765/123‑1 (MQ=255) ctgGAGCCGCGT‑CGTCTGGCGGCGCGTAACGTCGCGCAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCG‑CAAAACTGCGTCGGGCCGAATAcc > 2:24765/1‑123 (MQ=255) ggAGCCGCGT‑CGTCTGGCGGCGCGTAACGTCGCGCAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCG‑CAAAACTGCGTCGGGCCGAATACCCGCCTGGAAGTGGTTACCGAAGGCGTGCTGACGCGCATGATCCAGCGTGACCCGGAACTGAGCGGGGTTGGACTGGTGATCCTTGATGAATTTCATGAGCGCAGCTTGCAGGCgg > 1:439873/1‑236 (MQ=255) cgt‑cgtCTGGCGGCGCGTAACGTCGCGCAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCG‑CAAAACTGCGTCGGGCCGAATACCCGCCTGGAAGTGGTTACCGAAGGCGTGCTGACGCGCATGATCCAGCGTGACCCGGAACTGAg < 2:346698/176‑1 (MQ=255) cgt‑cgtCTGGCGGCGCGTAACGTCGCGCAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCG‑CAAAACTGCGTCGGGCCGAATACCCGCCTGGAAGTGGTTACCGAAGGCGTGCTGACGCGCATGATCCAGCGTGACCCGGAACTGAg > 1:346698/1‑176 (MQ=255) ggcggcGCGTAACGTCGCGAAACGGCTGCCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCG‑CAAAACTGCGTCGGGCCGAATACCCGCCTGGAAGTGGTTACCGAAGGCGTGCTGACGCGCATGATCCAGCGTGACCCGGAACTGAGCGGTGTTGGACTGGTGATCCTTGATGAATTTCATGAGCGCAGCTTGCAGGCg < 1:581960/220‑1 (MQ=255) cgcgTAACGTCGCGCAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCG‑CAAAACTGCGTCGGGCCGAATACCCGCCTGGAAGTGGTTACCGAAGGCGTGCTGACGCGCATGATCCAGCGTGACCCGGAACTGAGCGGTGTTGGACTGGTGATCCTTGATGAATTTCATGAGCGCAGCTTGCAGGCGGATTTGGCGTTGGCGCTGTTa > 1:340597/1‑236 (MQ=255) aCGTCGCGCAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCG‑CAAAACTGCGTCGGGCCGAATACCCGCCTGGAAGTGGTTACCGAAGGCGTGCTGACGCGCATGATCCAGCGTGACCCGGAACTGAGCGGTGTTGGACTGGTGATCCTTGATGAATTTCATGAGCGCAGCTTGCAGGCGGATTTGGCGTTGTCGCTGTTACTcca > 1:666557/1‑233 (MQ=255) gcAACGGCTGGCGGAGCTTCTTAACGAAAAGCCGGGCGATACCGTTGGCCCCCGGGTGCGTGCC‑CAAAACTGCGTCGGGCCGAATACCCGCCTGGAAGTGGTTACCGAAGGCGTGCTGACGCGCATGATCCAGCGTGACCCGGAACTGAGCGGTGTTGGACTGGTGATCCTTGATGAATTTCATGAGCGCAGCTTGCAGGCGGATTTGGCGTTGGCGCTGTTACTCGATGTGcaac < 2:674564/236‑1 (MQ=255) cAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCG‑CAAAACTGCGTCGGGCCGAATACCCGCCTGGAAGTGGTTACCGAAGGCGTGCTGACGCGCATGATCCAGCGTGACCCGGAACTGAGCGGTGTTGGACTGGTGATCCTTGATGAATTTCATGAGCGCAGCTTGCAGGCGGATTTGGCGTTGGCGCTGTTACTCGATGTGcaac < 1:430567/235‑1 (MQ=255) cAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGCCTCCCGGATGCGGGCG‑CAAAACTGCGTCGGGCCGAATACCCGCCTGGAAGTGGTTACCGAAGGCGTGCTGACGCGCATGATCCAGCGTGACCCGGAACTGAGCGGTGTTGGACTGGTGATCCTTGATGAATTTCATGAGCGCAGCTTGCAGGCGGATTTGGCGTTGGCGCTGTTACTCGATGTGcaaca < 1:385805/236‑1 (MQ=255) gCTGGCGGACCTGCTTAACGAAAAGCCAGGCGATTCCGTTGGCTCCCGGATGCGTGCG‑CAAAACTGCGTCGGGCCGAATACCCGCCTGGAAGTGGTTACCGAAGGCGTGCTGACGCGCATGATCCAGCGTGACCCGGAACTGAGCGGTGTTGGACTGGTGATCCTTGATGAATTTCATGAGCGCAGCTTGCAGGCGGATTTGGCGTTGGCGCTGTTACTCGATGTGCAACAAGGTc < 1:386522/236‑1 (MQ=255) aGCTGCTTAACGAAAGGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCG‑CAAAACTGCGTCGGGCCGAATACCCGCCTGGAAGTGGTTACCGAAGGCGTGCTGACGCGCATGATCCAGCGTGACCCGGAACTGAGCGGTGTTGGACTGGTGATCCTTGATGAATTTCATGAGCGCAGCTTGCAGGCGGATTTGGCGTTGGCGCTGTTACTCGATGTGCAACAAGGTCTGCGtga < 1:92643/235‑1 (MQ=255) gtcgctAAACGAAACGGCAGGCGATACCGTTGGCTCCCGGATGGGTGCC‑AAAACCGGCGTCGGGCCGAATACCCGCCTGGAAGTGGTTACCGAAGGCGTGCTGACGCGCATGATCCAGCGTGACCCGGAACTGAGCGGTGTTGGACTGGTGATCCTTGATGAATTTCATGAGCGCAGCTTGCAGGCGGATTTGGCGTTGGCGCTGTTACTCGATGTGCAACAAGGTCTGCGtgatg < 2:177534/233‑1 (MQ=255) aCGAAAAGCCAGGCTATACCGTTGGCTACCGGATGGCTGCG‑CAAAACTGCGTCGGGCCGAATACCCGCCTGGAAGTGGTTACCGAAGGCGTGCTGACGCGCATGATCCAGCGTGACCCGGAACTGAGCGGTGTTGGACTGGTGATCCTTGATGAATTTCATGAGCGCAGCTTGCAGGCGGATTTGGCGTTGGCGCTGTTACTCGATGTGCAACAAGGTCTGCGTGATGACCTTaa < 1:742401/235‑1 (MQ=255) cgaagcgCCAGGCAGTACCGTTGGCTCCGGGATGGGGGCG‑GAAAACTGGTTCGGGCCGAATACCCGCCTGGAAGTGGTTACCGAAGGCGTGCTGACGCGCATGATCCAGCGTGACCCGGAACTGAGCGGTGTTGGACTGGTGATCCTTGATGAATTTCATGAGCGCAGCTTGCAGGCGGATTTGGCGTTGGCGCTGTTACTCGATGTGCAACAAGGTCTGCGTGATGACCTTAAAc < 1:83852/230‑1 (MQ=255) aaaGCCAGGCGATACCGTTGGCTCCCGGATGCGTGCG‑CAAAACTGCGTCGGGCCGAACACCCGCCTGGAAGTGGTTACCGAAGGCGTGCTGACGCGCATGATCCAGCGTGACCCGGAACTGAGCGGTGTTGGACTGGTGATCCTTGATGAATTTCATGAGCGCAGCTTGCAGGCGGATTTGGCGTTGGCGCTTTTACTCGATGTGCAACAAGGTCTGCGTGATGACCTTAAActgc > 1:545041/1‑236 (MQ=255) ggtgATACCGTTGGCTCTGGGAGGTGTGCG‑CAACTCTGGGTGGGCCCGAATTCCCGGCTGGAAGTGGTTACCGAAGGCGTGCTGACGCGCATGATCCAGCGTGACCCGGAACTGAGCGGTGTTGGACTGGTGATCCTTGATGAATTTCATGAGCGCAGCTTGCAGGCGGATTTGGCGTTGGCGCTGTTACTCGATGTGCAACAAGGTCTGCGTGATGACCTTAAACTGCTGAtt < 2:400970/231‑1 (MQ=255) | GTCTTACCTGAATTACTTACCGCTCTCGATTGTGCGCCGCAGGTATTATTAAGTGCGCCGACCGGGGCCGGGAAATCAACCTGGCTGCCGCTGCAACTGCTGGCGCATCCCGGCATTAACGGGAAAATTATCCTGCTGGAGCCGCGT‑CGTCTGGCGGCGCGTAACGTCGCGCAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTACCGGATGCGTGCG‑CAAAACTGCGTCGGGCCGAATACCCGCCTGGAAGTGGTTACCGAAGGCGTGCTGACGCGCATGATCCAGCGTGACCCGGAACTGAGCGGTGTTGGACTGGTGATCCTTGATGAATTTCATGAGCGCAGCTTGCAGGCGGATTTGGCGTTGGCGCTGTTACTCGATGTGCAACAAGGTCTGCGTGATGACCTTAAACTGCTGATT > NC_000913/162129‑162566 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 6 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |